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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAGATGAAGAACGCGACCGCTTTTAATCCCCCATTTCTCTCCTTTTCCCCTTTACACTCTGCTTTTGAGTTAATGCCCCATCTCCCCGCTTTTAATCCCTTTCCGTCCGCTTTCCCTTCTGATTTCACTCCCCATTGCTCACCATTTGCCTCGCGTTCTTGGAAATTATCTTAAACCCATTACCCTTCTTCTTTCCCTCTTCTGGATTTCAGGGATTTCCCATCGCAGTGATGATCAAGTCCCCTTGTGAGTTCCTTCTCTTTTTACCCTTTTCTGCGTATGGTTTATGATTGTTTGTTGTCCATGATTCTTCTTGGGTTATTAGCTTATTACATTCAAAGATCTGCACCGCCGCCTTGATGGGTTTTGTGTTTTCCCCCTTTTTTCTTTGAATTTTCAGCCGTGTTGACGAAGAGATGGTAGCTTATTACATTCTGTGTATTGTTTTATCTTTTGGGGCTAAGAATTGGTAGTGTCATTACTATTAACTGGCAGAAAAGACAGAAGTGTTGGCGTTTGGACATGTTCTTAGTTAGTACATGTTTCGTCATATAGCTTGTATATGTCTTTTATTCATTAATTTAAGGACAAAAGTGATTTGCCCACATCGTTTCTGTCGACATGAATCTATGATCAACGACAAGATGATGAACACAGCTCCCCTTTTAATATATTCTATTTCTACTCCACATGCACTTTCCTTAACTAGCTTTCTTCTACTTGATGCTAGATCTGATACTTTGTCAAGTTCAAAATCAGATGTGTTCTTAATTTGTGGAGCTGAGTAA mRNA sequence ATGGAGATGAAGAACGCGACCGCTTTTAATCCCCCATTTCTCTCCTTTTCCCCTTTACACTCTGCTTTTGAGTTAATGCCCCATCTCCCCGCTTTTAATCCCTTTCCGTCCGCTTTCCCTTCTGATTTCACTCCCCATTGCTCACCATTTGCCTCGCGGATTTCCCATCGCAGTGATGATCAAGTCCCCTTATCTGATACTTTGTCAAGTTCAAAATCAGATGTGTTCTTAATTTGTGGAGCTGAGTAA Coding sequence (CDS) ATGGAGATGAAGAACGCGACCGCTTTTAATCCCCCATTTCTCTCCTTTTCCCCTTTACACTCTGCTTTTGAGTTAATGCCCCATCTCCCCGCTTTTAATCCCTTTCCGTCCGCTTTCCCTTCTGATTTCACTCCCCATTGCTCACCATTTGCCTCGCGGATTTCCCATCGCAGTGATGATCAAGTCCCCTTATCTGATACTTTGTCAAGTTCAAAATCAGATGTGTTCTTAATTTGTGGAGCTGAGTAA Protein sequence MEMKNATAFNPPFLSFSPLHSAFELMPHLPAFNPFPSAFPSDFTPHCSPFASRISHRSDDQVPLSDTLSSSKSDVFLICGAE
Homology
BLAST of Carg03171 vs. NCBI nr
Match: KAG7010694.1 (hypothetical protein SDJN02_27490, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 170.2 bits (430), Expect = 7.2e-39 Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0
Query: 1 MEMKNATAFNPPFLSFSPLHSAFELMPHLPAFNPFPSAFPSDFTPHCSPFASRISHRSDD 60
MEMKNATAFNPPFLSFSPLHSAFELMPHLPAFNPFPSAFPSDFTPHCSPFASRISHRSDD
Sbjct: 1 MEMKNATAFNPPFLSFSPLHSAFELMPHLPAFNPFPSAFPSDFTPHCSPFASRISHRSDD 60
Query: 61 QVPLSDTLSSSKSDVFLICGAE 83
QVPLSDTLSSSKSDVFLICGAE
Sbjct: 61 QVPLSDTLSSSKSDVFLICGAE 82
BLAST of Carg03171 vs. NCBI nr
Match: KAG6570847.1 (putative protein phosphatase 2C 52, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 62.8 bits (151), Expect = 1.6e-06 Identity = 30/31 (96.77%), Postives = 31/31 (100.00%), Query Frame = 0
Query: 52 SRISHRSDDQVPLSDTLSSSKSDVFLICGAE 83
+RISHRSDDQVPLSDTLSSSKSDVFLICGAE
Sbjct: 19 TRISHRSDDQVPLSDTLSSSKSDVFLICGAE 49
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7010694.1 | 7.2e-39 | 100.00 | hypothetical protein SDJN02_27490, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6570847.1 | 1.6e-06 | 96.77 | putative protein phosphatase 2C 52, partial [Cucurbita argyrosperma subsp. soror... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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