Carg03158 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03158
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor MYB13-like
Location	Carg_Chr20: 2808792 .. 2809983 (-)
RNA-Seq Expression	Carg03158
Synteny	Carg03158

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAGATGGTGAAAATGGAAGAAGAAAGGGTAGATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTTTGCAGGTAATTCATGCATTCATTCATTATGAACTAATTAATTCATGTTTGGTCACTTAGTTTTACTAATAAACATGAACATGATGGTACCGTTTAGGTCTATCCCGATGTGGAAAAAGCTGTAGATTGCGTTGGATGAACTACTTGGCGCCTGATATTAAAAGAGGGAACTTCCAAAAGGAAGAGGATCAAACCATCCTTCGATTGCAAGCAACTCTCGGAAATAGGTCATTTGTAACAGCCCAGATACACACACTACTAGTAGATATTGTCTTTTTTGAGCTTTCCCTTTAAAATGCGTCTACTAGGGAAAGGTTTCCACGTTCTTATAAAGGGTGTTTCGTTCTCCTCCCAATCAACGTGGGATTCTCACATCATCTTTGTTGAGGATTGTTGGGAGGGAGTTGCACCTTGACTAAATGATCATGGGCTTATAAGTAAGAAATACCTCTCCATTGGTAATTAGGTCTTTTGGGGGAGTCCCACGAGAGCTTATACTCAAAGTGACAATATCATACCATTGTAGAGAGCGGTTATTCTTAATATCCTTCCTAAACCCTCTCGTATGTATACTCAACTCTTACGCAATGCATAATGGATTTGGACAGGTGGTCTGCCATTGCAGCTCATTTACCGGGGAGAACAGATAACGACATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAGAACCCGTCAAACACGGAGGTTGAAGAAGCAGCAGCTAGTTCATGCTCGGAATTAAGAATCCGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAATTGGATGAAACCCTTTTTGTTTTGAATTCAGAAATGGCAACCCCAGAATTAGCAGCCAAGCATAAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAACTGGGCGGCAACTTATGGACCGATCCTTTTGTTCTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATGTACCAATGGATCTCTTACAACATTATGAAATGTTTCCTCCCATTCAGTTTTGA

mRNA sequence

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAGATGGTGAAAATGGAAGAAGAAAGGGTAGATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTGGTCTGCCATTGCAGCTCATTTACCGGGGAGAACAGATAACGACATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAGAACCCGTCAAACACGGAGGTTGAAGAAGCAGCAGCTAGTTCATGCTCGGAATTAAGAATCCGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAATTGGATGAAACCCTTTTTGTTTTGAATTCAGAAATGGCAACCCCAGAATTAGCAGCCAAGCATAAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAACTGGGCGGCAACTTATGGACCGATCCTTTTGTTCTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATGTACCAATGGATCTCTTACAACATTATGAAATGTTTCCTCCCATTCAGTTTTGA

Coding sequence (CDS)

ATGGAAGAAGAGGGTGATGAGAGAGAGAGAGAAGATGGTGAAAATGGAAGAAGAAAGGGTAGATGGAGTAAGGAGGAAGATGAGAAACTTAGAGCTTATGTTACCAAATATGGCTCTTGGAATTGGCGCTTAATTCCCAAGTGGTCTGCCATTGCAGCTCATTTACCGGGGAGAACAGATAACGACATAAAGAATCATTGGCACACGAACTTAAAGAAACTTTTGGATCAGAACCCGTCAAACACGGAGGTTGAAGAAGCAGCAGCTAGTTCATGCTCGGAATTAAGAATCCGAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAATTGGATGAAACCCTTTTTGTTTTGAATTCAGAAATGGCAACCCCAGAATTAGCAGCCAAGCATAAAGGCATGAACTTTGGGGAAACTGAGACATGGGTTGTTGGTTTGAATGCTGAACACTCTATGGAACTGGGCGGCAACTTATGGACCGATCCTTTTGTTCTTGAAGACCCTTTAAGTTTGGATAATAACCCAACTCATGTACCAATGGATCTCTTACAACATTATGAAATGTTTCCTCCCATTCAGTTTTGA

Protein sequence

MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKWSAIAAHLPGRTDNDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATPELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPPIQF

Homology

[Close]

BLAST of Carg03158 vs. NCBI nr
Match: KAG7010707.1 (Transcription factor MYB80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 391.7 bits (1005), Expect = 3.6e-105
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 1   MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKWSAIAAHLPGRTD 60
           MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKWSAIAAHLPGRTD
Sbjct: 1   MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKWSAIAAHLPGRTD 60

Query: 61  NDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSE 120
           NDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSE
Sbjct: 61  NDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSE 120

Query: 121 MATPELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMD 180
           MATPELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMD
Sbjct: 121 MATPELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMD 180

Query: 181 LLQHYEMFPPIQF 194
           LLQHYEMFPPIQF
Sbjct: 181 LLQHYEMFPPIQF 193

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BLAST of Carg03158 vs. NCBI nr
Match: XP_023512256.1 (transcription factor WER-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 335.5 bits (859), Expect = 3.0e-88
Identity = 176/236 (74.58%), Postives = 179/236 (75.85%), Query Frame = 0


Query: 1   MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK------------- 60
           MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK             
Sbjct: 1   MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRL 60

Query: 61  ---------------------------------WSAIAAHLPGRTDNDIKNHWHTNLKKL 120
                                            WSAIAAHLPGRTDN+IKNHWHTNLKKL
Sbjct: 61  RWMNYLAPNIKRGNFQKEEDQTILRLQATLGNRWSAIAAHLPGRTDNEIKNHWHTNLKKL 120

Query: 121 LDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATPELAAKHKGMN 180
           LDQNPSNTEVEEAAASSCSELRIR         EELDETLFVLNS+MA PELAAKH+GMN
Sbjct: 121 LDQNPSNTEVEEAAASSCSELRIR---------EELDETLFVLNSDMAAPELAAKHEGMN 180

Query: 181 FGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPP 191
           FGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDL QHYEMFPP
Sbjct: 181 FGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLFQHYEMFPP 227

[Close]

BLAST of Carg03158 vs. NCBI nr
Match: XP_022986201.1 (transcription factor MYB13-like [Cucurbita maxima])

HSP 1 Score: 328.2 bits (840), Expect = 4.9e-86
Identity = 171/236 (72.46%), Postives = 180/236 (76.27%), Query Frame = 0


Query: 1   MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK------------- 60
           MEEEGDERERE+GENGR+KG+WSKEEDEKLRAYVTKYGSWNWRLIPK             
Sbjct: 1   MEEEGDERERENGENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRL 60

Query: 61  ---------------------------------WSAIAAHLPGRTDNDIKNHWHTNLKKL 120
                                            WSAIA +LPGRTDN+IKNHWHTNLKKL
Sbjct: 61  RWMNYLRPDIKRGNFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKL 120

Query: 121 LDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATPELAAKHKGMN 180
           LDQNPSNTEVE+AAASSCSELRIREE      EEELDETL VLNSEMATPELAAKH+GMN
Sbjct: 121 LDQNPSNTEVEDAAASSCSELRIREE------EEELDETLIVLNSEMATPELAAKHEGMN 180

Query: 181 FGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPP 191
           FGETETWVVGLNAEHSME+GGNLWTDPFV EDPLSLDNNPTHVPMDL +HYEMFPP
Sbjct: 181 FGETETWVVGLNAEHSMEVGGNLWTDPFVFEDPLSLDNNPTHVPMDLFEHYEMFPP 230

[Close]

BLAST of Carg03158 vs. NCBI nr
Match: XP_022944071.1 (transcription factor MYB13-like [Cucurbita moschata])

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 169/236 (71.61%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 4   EGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK---------------- 63
           +G  + R+ G     KGRWSKEEDEKLRAYVTKYGSWNWRLIPK                
Sbjct: 9   QGCIKRRKRGFVWPSKGRWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWM 68

Query: 64  ------------------------------WSAIAAHLPGRTDNDIKNHWHTNLKKLLDQ 123
                                         WSAIAAHLPGRTDNDIKNHWHTNLKKLLDQ
Sbjct: 69  NYLAPDIKRGNFQKEEDQTILRLQATLGNRWSAIAAHLPGRTDNDIKNHWHTNLKKLLDQ 128

Query: 124 NPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATPELAAKHKGMNFGE 183
           NPSNTEVEEAAASSCSELRIREEEE     EELDETLFVLNS+MATPELAAKH+GMNFGE
Sbjct: 129 NPSNTEVEEAAASSCSELRIREEEE----GEELDETLFVLNSDMATPELAAKHEGMNFGE 188

Query: 184 TETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPPIQF 194
           TETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPP  F
Sbjct: 189 TETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPPTHF 240

[Close]

BLAST of Carg03158 vs. NCBI nr
Match: KAG6570857.1 (Transcription factor MYB30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 6.2e-73
Identity = 140/147 (95.24%), Postives = 142/147 (96.60%), Query Frame = 0


Query: 47  KWSAIAAHLPGRTDNDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEEEEEG 106
           +WSAIAAHLPGRTDNDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEE    
Sbjct: 5   RWSAIAAHLPGRTDNDIKNHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEE---- 64

Query: 107 EEELDETLFVLNSEMATPELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLED 166
            EELDETLFVLNSEM+TPELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLED
Sbjct: 65  GEELDETLFVLNSEMSTPELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLED 124

Query: 167 PLSLDNNPTHVPMDLLQHYEMFPPIQF 194
           PLSLDNNPTHVPMDLLQHYEMFPPIQF
Sbjct: 125 PLSLDNNPTHVPMDLLQHYEMFPPIQF 147

[Close]

BLAST of Carg03158 vs. ExPASy Swiss-Prot
Match: Q7XQN1 (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.7e-13
Identity = 40/104 (38.46%), Postives = 50/104 (48.08%), Query Frame = 0


Query: 18  RKGRWSKEEDEKLRAYVTKYGSWNWRLIPK------------------------------ 76
           ++G+W+ EED KL +Y+T+YG+ NWRLIPK                              
Sbjct: 13  KRGQWTPEEDNKLLSYITQYGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGEFTD 72

[Close]

BLAST of Carg03158 vs. ExPASy Swiss-Prot
Match: Q9XHV0 (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.0e-11
Identity = 37/104 (35.58%), Postives = 49/104 (47.12%), Query Frame = 0


Query: 18  RKGRWSKEEDEKLRAYVTKYGSWNWRLIPK------------------------------ 76
           ++G+W+ EED KL +Y+ ++G+ NWRLIPK                              
Sbjct: 13  KRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSE 72

[Close]

BLAST of Carg03158 vs. ExPASy Swiss-Prot
Match: Q7XBH4 (Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 SV=2)

HSP 1 Score: 67.0 bits (162), Expect = 2.6e-10
Identity = 39/107 (36.45%), Postives = 49/107 (45.79%), Query Frame = 0


Query: 16  GRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK---------------------------- 75
           G +KG W+ EED+ L A++ ++G  NWR +PK                            
Sbjct: 11  GLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNF 70

Query: 76  ------------------WSAIAAHLPGRTDNDIKNHWHTNLKKLLD 77
                             WSAIAA LPGRTDN+IKN WHT+LKK LD
Sbjct: 71  SKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLD 117

[Close]

BLAST of Carg03158 vs. ExPASy Swiss-Prot
Match: Q9LDR8 (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-10
Identity = 38/108 (35.19%), Postives = 50/108 (46.30%), Query Frame = 0


Query: 14  ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIP--------------------------- 73
           +NG +KG W+ EED+KL  Y+ K+G  NWR +P                           
Sbjct: 9   KNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRG 68

Query: 74  -------------------KWSAIAAHLPGRTDNDIKNHWHTNLKKLL 76
                              KWSAIAA LPGRTDN+IKN W+T+++K L
Sbjct: 69  RFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKL 116

[Close]

BLAST of Carg03158 vs. ExPASy Swiss-Prot
Match: Q9M0J5 (Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.5e-10
Identity = 38/108 (35.19%), Postives = 50/108 (46.30%), Query Frame = 0


Query: 14  ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIP--------------------------- 73
           +NG +KG W+ EED+KL  Y+  +G  NWR +P                           
Sbjct: 9   KNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNYLRPDIKRG 68

Query: 74  -------------------KWSAIAAHLPGRTDNDIKNHWHTNLKKLL 76
                              KWSAIAA LPGRTDN+IKNHW+T+++K L
Sbjct: 69  RFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRL 116

[Close]

BLAST of Carg03158 vs. ExPASy TrEMBL
Match: A0A6J1JAG0 (transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111484015 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 2.4e-86
Identity = 171/236 (72.46%), Postives = 180/236 (76.27%), Query Frame = 0


Query: 1   MEEEGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK------------- 60
           MEEEGDERERE+GENGR+KG+WSKEEDEKLRAYVTKYGSWNWRLIPK             
Sbjct: 1   MEEEGDERERENGENGRKKGKWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRL 60

Query: 61  ---------------------------------WSAIAAHLPGRTDNDIKNHWHTNLKKL 120
                                            WSAIA +LPGRTDN+IKNHWHTNLKKL
Sbjct: 61  RWMNYLRPDIKRGNFQKEEDQTILRLQATLGNRWSAIATYLPGRTDNEIKNHWHTNLKKL 120

Query: 121 LDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATPELAAKHKGMN 180
           LDQNPSNTEVE+AAASSCSELRIREE      EEELDETL VLNSEMATPELAAKH+GMN
Sbjct: 121 LDQNPSNTEVEDAAASSCSELRIREE------EEELDETLIVLNSEMATPELAAKHEGMN 180

Query: 181 FGETETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPP 191
           FGETETWVVGLNAEHSME+GGNLWTDPFV EDPLSLDNNPTHVPMDL +HYEMFPP
Sbjct: 181 FGETETWVVGLNAEHSMEVGGNLWTDPFVFEDPLSLDNNPTHVPMDLFEHYEMFPP 230

[Close]

BLAST of Carg03158 vs. ExPASy TrEMBL
Match: A0A6J1FTF2 (transcription factor MYB13-like OS=Cucurbita moschata OX=3662 GN=LOC111448622 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.8e-82
Identity = 169/236 (71.61%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 4   EGDEREREDGENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK---------------- 63
           +G  + R+ G     KGRWSKEEDEKLRAYVTKYGSWNWRLIPK                
Sbjct: 9   QGCIKRRKRGFVWPSKGRWSKEEDEKLRAYVTKYGSWNWRLIPKFAGLSRCGKSCRLRWM 68

Query: 64  ------------------------------WSAIAAHLPGRTDNDIKNHWHTNLKKLLDQ 123
                                         WSAIAAHLPGRTDNDIKNHWHTNLKKLLDQ
Sbjct: 69  NYLAPDIKRGNFQKEEDQTILRLQATLGNRWSAIAAHLPGRTDNDIKNHWHTNLKKLLDQ 128

Query: 124 NPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATPELAAKHKGMNFGE 183
           NPSNTEVEEAAASSCSELRIREEEE     EELDETLFVLNS+MATPELAAKH+GMNFGE
Sbjct: 129 NPSNTEVEEAAASSCSELRIREEEE----GEELDETLFVLNSDMATPELAAKHEGMNFGE 188

Query: 184 TETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPPIQF 194
           TETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPP  F
Sbjct: 189 TETWVVGLNAEHSMELGGNLWTDPFVLEDPLSLDNNPTHVPMDLLQHYEMFPPTHF 240

[Close]

BLAST of Carg03158 vs. ExPASy TrEMBL
Match: B9RHM0 (R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_1761410 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-19
Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 14 ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKWSAIAAHLPGRTDNDIKNHWHTNLKK 73
          +NG +KG WS+EED+KLRAY+ KYG WNWR +PKWS IAA LPGRTDN++KN+WHT+LKK
Sbjct: 9  KNGLKKGAWSREEDDKLRAYILKYGHWNWRELPKWSKIAAQLPGRTDNEVKNYWHTHLKK 68

Query: 74 LLDQNPSNTEVEE 87
             +  S +  +E
Sbjct: 69 RTQRTQSKSGSKE 81

[Close]

BLAST of Carg03158 vs. ExPASy TrEMBL
Match: A0A6A6K4E4 (HTH myb-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_013466 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17
Identity = 61/167 (36.53%), Postives = 93/167 (55.69%), Query Frame = 0


Query: 14  ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPKWSAIAAHLPGRTDNDIKNHWHTNLKK 73
           +NG +KG W++EED+KLRAY+  YG  NWR +PKWS IA +LPGRTDN+IKNHWHT+LK+
Sbjct: 9   KNGLKKGAWNQEEDDKLRAYIRAYGHGNWRELPKWSTIATNLPGRTDNEIKNHWHTHLKR 68

Query: 74  LLDQN-PSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATPELAAKHKG 133
              Q+  SN + +E ++ +   L    ++ E         +L ++       + ++ H  
Sbjct: 69  RGKQSQASNVQAKEQSSETPESLISPCKKLEAADVANNTPSLPIILESFPLSKESSDHSS 128

Query: 134 MNFGETETWVVGLNAEHSM-------ELGGNLWTDPFVLEDPLSLDN 173
           ++ G      V   AE S+       E G + WT PFV ++    D+
Sbjct: 129 LSAG------VSFVAEDSLTLMGIFEESGEDFWTQPFVGDNTYDQDD 169

[Close]

BLAST of Carg03158 vs. ExPASy TrEMBL
Match: A0A118JWU4 (Homeodomain-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_001997 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.0e-17
Identity = 60/179 (33.52%), Postives = 93/179 (51.96%), Query Frame = 0


Query: 14  ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIPK---------WSAIAAHLPGRTDNDIK 73
           +NG +KG WS++ED KLRAYV +YG WNWRL+PK         WS +AA+LPGR+DN+IK
Sbjct: 9   KNGVKKGAWSEDEDNKLRAYVQRYGHWNWRLLPKFAGMSHFPEWSEMAAYLPGRSDNEIK 68

Query: 74  NHWHTNLKKLLDQNPSNTEVEEAAASSCSELRIREEEEEEEGEEELDETLFVLNSEMATP 133
           N WHT+LKK   ++ +  E E        +    EE   +  + +L + + +L +E    
Sbjct: 69  NRWHTHLKKRAQKDQTELENEHIGTVEPDQTNNTEENLVQNSDLQLQQDIEILLAESPLS 128

Query: 134 ELAAKHKGMNFGETETWVVGLNAEHSMELGGNLWTDPFVLE-DPLSLDNNPTHVPMDLL 183
                   +N  ++      +         G+ WTDPF  + D +   ++   +P DL+
Sbjct: 129 SSTTNLSWLNGFDSAGSSDDIPQLTDYAPVGDFWTDPFFSDNDSIISSSDNLFLPSDLV 187

[Close]

BLAST of Carg03158 vs. TAIR 10
Match: AT5G56110.1 (myb domain protein 103 )

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-12
Identity = 37/104 (35.58%), Postives = 49/104 (47.12%), Query Frame = 0


Query: 18  RKGRWSKEEDEKLRAYVTKYGSWNWRLIPK------------------------------ 76
           ++G+W+ EED KL +Y+ ++G+ NWRLIPK                              
Sbjct: 13  KRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSE 72

[Close]

BLAST of Carg03158 vs. TAIR 10
Match: AT1G34670.1 (myb domain protein 93 )

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11
Identity = 40/110 (36.36%), Postives = 50/110 (45.45%), Query Frame = 0


Query: 14  ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIP--------------------------- 73
           ENG +KG W+ EED+KL  Y+ K+G  +WR +P                           
Sbjct: 9   ENGLKKGPWTPEEDQKLIDYIHKHGHGSWRALPKLADLNRCGKSCRLRWTNYLRPDIKRG 68

Query: 74  -------------------KWSAIAAHLPGRTDNDIKNHWHTNLKKLLDQ 78
                              KWSAIA HL GRTDN+IKN W+T+LKK L Q
Sbjct: 69  KFSAEEEQTILHLHSILGNKWSAIATHLQGRTDNEIKNFWNTHLKKKLIQ 118

[Close]

BLAST of Carg03158 vs. TAIR 10
Match: AT4G21440.1 (MYB-like 102 )

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11
Identity = 38/108 (35.19%), Postives = 50/108 (46.30%), Query Frame = 0


Query: 14  ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIP--------------------------- 73
           +NG +KG W+ EED+KL  Y+ K+G  NWR +P                           
Sbjct: 9   KNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRG 68

Query: 74  -------------------KWSAIAAHLPGRTDNDIKNHWHTNLKKLL 76
                              KWSAIAA LPGRTDN+IKN W+T+++K L
Sbjct: 69  RFSFEEEETIIQLHSFLGNKWSAIAARLPGRTDNEIKNFWNTHIRKKL 116

[Close]

BLAST of Carg03158 vs. TAIR 10
Match: AT4G28110.1 (myb domain protein 41 )

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11
Identity = 38/108 (35.19%), Postives = 50/108 (46.30%), Query Frame = 0


Query: 14  ENGRRKGRWSKEEDEKLRAYVTKYGSWNWRLIP--------------------------- 73
           +NG +KG W+ EED+KL  Y+  +G  NWR +P                           
Sbjct: 9   KNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNYLRPDIKRG 68

Query: 74  -------------------KWSAIAAHLPGRTDNDIKNHWHTNLKKLL 76
                              KWSAIAA LPGRTDN+IKNHW+T+++K L
Sbjct: 69  RFSFEEEETIIQLHSVMGNKWSAIAARLPGRTDNEIKNHWNTHIRKRL 116

[Close]

BLAST of Carg03158 vs. TAIR 10
Match: AT3G28470.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 4.2e-11
Identity = 38/104 (36.54%), Postives = 46/104 (44.23%), Query Frame = 0


Query: 18  RKGRWSKEEDEKLRAYVTKYGSWNWRLIPK------------------------------ 76
           +KG W++EED K+ AYV  +G  NW LIPK                              
Sbjct: 13  KKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKSCRLRWTNYLRPDLKHDSFST 72

The following BLAST results are available for this feature:

BLAST of Carg03158 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010707.1	3.6e-105	100.00	Transcription factor MYB80, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023512256.1	3.0e-88	74.58	transcription factor WER-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986201.1	4.9e-86	72.46	transcription factor MYB13-like [Cucurbita maxima]	[more]
XP_022944071.1	1.6e-81	71.61	transcription factor MYB13-like [Cucurbita moschata]	[more]
KAG6570857.1	6.2e-73	95.24	Transcription factor MYB30, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Carg03158 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XQN1	9.7e-13	38.46	Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=...	[more]
Q9XHV0	7.0e-11	35.58	Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1	[more]
Q7XBH4	2.6e-10	36.45	Transcription factor MYB4 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB4 PE=2 ...	[more]
Q9LDR8	3.5e-10	35.19	Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1	[more]
Q9M0J5	3.5e-10	35.19	Transcription factor MYB41 OS=Arabidopsis thaliana OX=3702 GN=MYB41 PE=1 SV=1	[more]

BLAST of Carg03158 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JAG0	2.4e-86	72.46	transcription factor MYB13-like OS=Cucurbita maxima OX=3661 GN=LOC111484015 PE=4...	[more]
A0A6J1FTF2	7.8e-82	71.61	transcription factor MYB13-like OS=Cucurbita moschata OX=3662 GN=LOC111448622 PE...	[more]
B9RHM0	3.2e-19	61.64	R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_1761...	[more]
A0A6A6K4E4	1.0e-17	36.53	HTH myb-type domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_01...	[more]
A0A118JWU4	1.0e-17	33.52	Homeodomain-like protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_00...	[more]

BLAST of Carg03158 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56110.1	4.9e-12	35.58	myb domain protein 103	[more]
AT1G34670.1	2.5e-11	36.36	myb domain protein 93	[more]
AT4G21440.1	2.5e-11	35.19	MYB-like 102	[more]
AT4G28110.1	2.5e-11	35.19	myb domain protein 41	[more]
AT3G28470.1	4.2e-11	36.54	Duplicated homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 18..73 e-value: 2.2E-13 score: 60.4
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 14..71 score: 11.195762
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 21..71 e-value: 2.47394E-13 score: 59.5114
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 19..70 e-value: 2.2E-14 score: 53.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 14..75 score: 23.038218
None	No IPR available	GENE3D	1.10.10.60		coord: 21..104 e-value: 6.4E-20 score: 73.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..110
None	No IPR available	PANTHER	PTHR10641:SF1271	MYB-RELATED PROTEIN 308-LIKE	coord: 47..167
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 47..167
None	No IPR available	PANTHER	PTHR10641:SF1271	MYB-RELATED PROTEIN 308-LIKE	coord: 14..48
None	No IPR available	PANTHER	PTHR10641	MYB FAMILY TRANSCRIPTION FACTOR	coord: 14..48
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 16..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03158-RA	Carg03158-RA	mRNA