Carg03152 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03152
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Xyloglucan endotransglucosylase/hydrolase
Location	Carg_Chr20: 2843241 .. 2844591 (-)
RNA-Seq Expression	Carg03152
Synteny	Carg03152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTATAAATACACTGCTCCGGTGTTATGCACAGTAGAAGCTTCAGCTCAGCTTATAAGCAGTGTCCATATCTGCTCTGTCCATGGCTGCTTCTGTGTCTTTTGCTTGTGTTCTTGGCTTCTTTCTGTGTTCTTTAATGGCGGGTTCCATCGAATCCAGAAATTTTCATGACCTGTTCCAGCCAAGCTGGGCATTCGATCATTTCATCTATGAAGGAGAGCTTCTTAAGCTTAGACTCGACAACTCTTCCGGTACTTTAATTACTATATTAAATTCTGCTCTGGTTTTCGTTTTCGAGTTGCTGATACTGAGAATTTTCAGGTGCTGGGTTTTCGTCGAAGAACAAGTACCTGTTTGGGAAGGTCACCATTCAAATTAAACTCATCGCCGGTGACTCTGCTGGAACTGTCACCGCATTTTATGTATGTTTCTTAATCAAATCATTGAAATGGGTTAGCGATTATCTTGAAATGTGATGTAATCATGTGTCTGTGATGATGCAGATGTCATCGGAGGGCTCGAATCACAACGAATTCGACTTTGAGTTTCTGGGGAATACGAGCGGCGAACCTTACTCTGTTCAAACCAATGTGTACGTTAATGGCGTGGGGAACAGGGAACAGAGGTTGAACCTCTGGTTTGACCCAACCAAGGACTTTCACTCCTATTCCATCTTCTGGAATCGTCGACAAGTCATGTAAGCAATCTTCCTTGGCCCATGTTTTATGGTCTCTGCTCGACAATGTCGGGGTGGACCATTTTTGCTTTTGGATGTTTGTGTCGGGGATGGGGTCACTCGCTACAAAACAGAGCAAAACAGAGAAAAACAGAGCAAAACAGAACAAATTTTGGTTCCATGAAAAAAGGGGCATTGAATTTCGTGCATTTTGATGATTTTTTGTTTCTTTGTGAATTTTGGTCAGTTTCCTCGTGGATGAAACTCCGATCAGAGTTCATTCGAATTTGGAGCACAGAGGCATACCCTTTCCGAAGGATCAAGCCATGGGTGTATATAGTTCAATATGGAACGCCGATGATTGGGCAACGCAGGGTGGTCGGGTGAAGACAAATTGGGCCCATGCGCCGTTCATAGCATCATACAAAGGCTTTGAGATCGACGGCTGCGAGTGTCCAACGACGGTTGCGACATCGGATGTTGCTCGGAAGTGTAGCAGCGATGGGGAGAAGAAGTATTGGTGGGACGAGCCGACAATGTCTGAGCTGAATTTGCACCAAAGCCATCAGCTTGTTTGGGTTCGGGCCAGGCATATGGTGTATGACTATTGTACGGACAGTGCGCGGTTTCCTGTTACTCCTGCTGAGTGCGTTCATCACACCCACCGCCATTGGTGA

mRNA sequence

CTATAAATACACTGCTCCGGTGTTATGCACAGTAGAAGCTTCAGCTCAGCTTATAAGCAGTGTCCATATCTGCTCTGTCCATGGCTGCTTCTGTGTCTTTTGCTTGTGTTCTTGGCTTCTTTCTGTGTTCTTTAATGGCGGGTTCCATCGAATCCAGAAATTTTCATGACCTGTTCCAGCCAAGCTGGGCATTCGATCATTTCATCTATGAAGGAGAGCTTCTTAAGCTTAGACTCGACAACTCTTCCGGTGCTGGGTTTTCGTCGAAGAACAAGTACCTGTTTGGGAAGGTCACCATTCAAATTAAACTCATCGCCGGTGACTCTGCTGGAACTGTCACCGCATTTTATTGTAGCAGCGATGGGGAGAAGAAGTATTGGTGGGACGAGCCGACAATGTCTGAGCTGAATTTGCACCAAAGCCATCAGCTTGTTTGGGTTCGGGCCAGGCATATGGTGTATGACTATTGTACGGACAGTGCGCGGTTTCCTGTTACTCCTGCTGAGTGCGTTCATCACACCCACCGCCATTGGTGA

Coding sequence (CDS)

ATGGCTGCTTCTGTGTCTTTTGCTTGTGTTCTTGGCTTCTTTCTGTGTTCTTTAATGGCGGGTTCCATCGAATCCAGAAATTTTCATGACCTGTTCCAGCCAAGCTGGGCATTCGATCATTTCATCTATGAAGGAGAGCTTCTTAAGCTTAGACTCGACAACTCTTCCGGTGCTGGGTTTTCGTCGAAGAACAAGTACCTGTTTGGGAAGGTCACCATTCAAATTAAACTCATCGCCGGTGACTCTGCTGGAACTGTCACCGCATTTTATTGTAGCAGCGATGGGGAGAAGAAGTATTGGTGGGACGAGCCGACAATGTCTGAGCTGAATTTGCACCAAAGCCATCAGCTTGTTTGGGTTCGGGCCAGGCATATGGTGTATGACTATTGTACGGACAGTGCGCGGTTTCCTGTTACTCCTGCTGAGTGCGTTCATCACACCCACCGCCATTGGTGA

Protein sequence

MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGFSSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDGEKKYWWDEPTMSELNLHQSHQLVWVRARHMVYDYCTDSARFPVTPAECVHHTHRHW

Homology

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BLAST of Carg03152 vs. NCBI nr
Match: KAG7010713.1 (Xyloglucan endotransglucosylase/hydrolase protein 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 323.9 bits (829), Expect = 7.2e-85
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDGEKKYWWDEPTMSELNLHQSHQLVWV 120
           SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDGEKKYWWDEPTMSELNLHQSHQLVWV
Sbjct: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDGEKKYWWDEPTMSELNLHQSHQLVWV 120

Query: 121 RARHMVYDYCTDSARFPVTPAECVHHTHRHW 152
           RARHMVYDYCTDSARFPVTPAECVHHTHRHW
Sbjct: 121 RARHMVYDYCTDSARFPVTPAECVHHTHRHW 151

[Close]

BLAST of Carg03152 vs. NCBI nr
Match: XP_023511864.1 (xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 260.0 bits (663), Expect = 1.3e-65
Identity = 149/297 (50.17%), Postives = 150/297 (50.51%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MAA VSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MAACVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY                              
Sbjct: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYMSSEGSNHNEFDFEFLGNTSGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKDFHSYSIFWNRRQVIFLVDETPIRVHSNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. NCBI nr
Match: XP_022986355.1 (xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita maxima])

HSP 1 Score: 257.7 bits (657), Expect = 6.3e-65
Identity = 148/297 (49.83%), Postives = 149/297 (50.17%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MA SVSFACVLGFFLCSLMA SIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MATSVSFACVLGFFLCSLMADSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY                              
Sbjct: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYMSSEGSNHNEFDFEFLGNTSGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKDFHSYSIFWNRRQVIFLVDETPIRVHSNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. NCBI nr
Match: XP_022944610.1 (xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita moschata])

HSP 1 Score: 257.3 bits (656), Expect = 8.2e-65
Identity = 148/297 (49.83%), Postives = 149/297 (50.17%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MAA VSFACVLGFFLCSLMA SIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MAAPVSFACVLGFFLCSLMADSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY                              
Sbjct: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYMSSEGSNHNEFDFEFLGNTSGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKDFHSYSIFWNRRQVIFLVDETPIRVHMNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. NCBI nr
Match: XP_022140268.1 (xyloglucan endotransglucosylase/hydrolase protein 9-like [Momordica charantia])

HSP 1 Score: 240.7 bits (613), Expect = 8.0e-60
Identity = 135/297 (45.45%), Postives = 146/297 (49.16%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MA+SVSFAC LGFFLC LM G +ESRNFH+LFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MASSVSFACFLGFFLCFLMVGYVESRNFHELFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSK+KY+FG+VTIQIKL+ GDSAGTVTAFY                              
Sbjct: 61  SSKSKYMFGRVTIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKDFHSYSIFWNRRQVIFLVDETPIRVHSNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. ExPASy Swiss-Prot
Match: Q8LDW9 (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana OX=3702 GN=XTH9 PE=2 SV=2)

HSP 1 Score: 147.9 bits (372), Expect = 9.2e-35
Identity = 90/283 (31.80%), Postives = 114/283 (40.28%), Query Frame = 0


Query: 7   FACVLGFFLCSLMAG-SIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGFSSKNK 66
           F CV+   +  +  G ++    F +L++ SWA DH + EGE+ KL+LDN SGAGF S++K
Sbjct: 7   FKCVMMIMVLVVSCGEAVSGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSK 66

Query: 67  YLFGKVTIQIKLIAGDSAGTVTAFYCSSD------------------------------- 126
           YLFGKV+IQIKL+ GDSAGTVTAFY SSD                               
Sbjct: 67  YLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGV 126

Query: 127 ------------------------------------------------------------ 149
                                                                       
Sbjct: 127 GNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVY 186

[Close]

BLAST of Carg03152 vs. ExPASy Swiss-Prot
Match: Q38910 (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana OX=3702 GN=XTH23 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.6e-15
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 3   ASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSW--AFDHFIYEGELLKLRLDNSSGAGF 62
           A +S++ ++   L S M  S+ S NF    + +W          G+LL L LD +SG+GF
Sbjct: 2   AMISYSTIVVALLASFMICSV-SANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGF 61

Query: 63  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDGEKKYWWDE 104
            SKN+YLFGK+ +QIKL+AG+SAGTVTA+Y  S G     WDE
Sbjct: 62  QSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGST---WDE 100

[Close]

BLAST of Carg03152 vs. ExPASy Swiss-Prot
Match: Q9FKL8 (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana OX=3702 GN=XTH13 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.1e-15
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 15  LCSLMAGSIESRNFHDLFQPSWAFD--HFIYEGELLKLRLDNSSGAGFSSKNKYLFGKVT 74
           L  L+  S+ + +F+D F  +W     + +  G+LL   LD  SG+GF SK +YLFGK+ 
Sbjct: 13  LSLLLLISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKID 72

Query: 75  IQIKLIAGDSAGTVTAFYCSSDGEKKYWWDE 104
           +++KL+AG+SAGTVTA+Y SS GE    WDE
Sbjct: 73  MKMKLVAGNSAGTVTAYYLSSKGET---WDE 100

[Close]

BLAST of Carg03152 vs. ExPASy Swiss-Prot
Match: Q9ZSU4 (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana OX=3702 GN=XTH14 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 0


Query: 5   VSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFD--HFIYEGELLKLRLDNSSGAGFSS 64
           +S    +GFF+ +  AG     NF++ F  +W     +    G+LL   LD  SG+GF S
Sbjct: 12  LSLLLAIGFFVVAASAG-----NFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQS 71

Query: 65  KNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDGEKKYWWDEPTMSELNLHQSH 116
           K +YLFGK+ +++KL+AG+SAGTVTA+Y SS G     WDE     L     H
Sbjct: 72  KKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTA---WDEIDFEFLGNRTGH 116

[Close]

BLAST of Carg03152 vs. ExPASy Swiss-Prot
Match: Q38911 (Xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana OX=3702 GN=XTH15 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 1  MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDH---FIYEGELLKLRLDNSSG 60
          M  S S   ++   L   + GS  + NF D F  +W  DH       G +L L LD  SG
Sbjct: 1  MGPSSSLTTIVATVLLVTLFGSAYASNFFDEFDLTWG-DHRGKIFNGGNMLSLSLDQVSG 60

Query: 61 AGFSSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDG 96
          +GF SK +YLFG++ +Q+KL+AG+SAGTVTA+Y SS G
Sbjct: 61 SGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQG 97

[Close]

BLAST of Carg03152 vs. ExPASy TrEMBL
Match: A0A6J1JDU5 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111484120 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.1e-65
Identity = 148/297 (49.83%), Postives = 149/297 (50.17%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MA SVSFACVLGFFLCSLMA SIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MATSVSFACVLGFFLCSLMADSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY                              
Sbjct: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYMSSEGSNHNEFDFEFLGNTSGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKDFHSYSIFWNRRQVIFLVDETPIRVHSNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. ExPASy TrEMBL
Match: A0A6J1FYS0 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111449016 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.0e-65
Identity = 148/297 (49.83%), Postives = 149/297 (50.17%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MAA VSFACVLGFFLCSLMA SIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MAAPVSFACVLGFFLCSLMADSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY                              
Sbjct: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYMSSEGSNHNEFDFEFLGNTSGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKDFHSYSIFWNRRQVIFLVDETPIRVHMNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. ExPASy TrEMBL
Match: A0A6J1CHL9 (Xyloglucan endotransglucosylase/hydrolase OS=Momordica charantia OX=3673 GN=LOC111010982 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.9e-60
Identity = 135/297 (45.45%), Postives = 146/297 (49.16%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MA+SVSFAC LGFFLC LM G +ESRNFH+LFQPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MASSVSFACFLGFFLCFLMVGYVESRNFHELFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSK+KY+FG+VTIQIKL+ GDSAGTVTAFY                              
Sbjct: 61  SSKSKYMFGRVTIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKDFHSYSIFWNRRQVIFLVDETPIRVHSNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. ExPASy TrEMBL
Match: A0A6J1G5B5 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111450965 PE=3 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 4.4e-56
Identity = 131/294 (44.56%), Postives = 142/294 (48.30%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MAAS+SF C L  FL   + GS+ESR+FH+L+QPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MAASMSFPCFLVLFLGFCLVGSVESRDFHELYQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSKNKY+FGKVTIQ+KLI GDSAGTVTAFY                              
Sbjct: 61  SSKNKYMFGKVTIQMKLIEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKEFHSYSILWTRRHVMFLVDETPIRVHSNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. ExPASy TrEMBL
Match: A0A6J1I7I3 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111469845 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.8e-56
Identity = 130/294 (44.22%), Postives = 143/294 (48.64%), Query Frame = 0


Query: 1   MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGF 60
           MAAS+SF C L FFL   + GS+ES++FH+L+QPSWAFDHFIYEGELLKLRLDNSSGAGF
Sbjct: 1   MAASMSFPCFLVFFLGFCLVGSVESKDFHELYQPSWAFDHFIYEGELLKLRLDNSSGAGF 60

Query: 61  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFY------------------------------ 120
           SSKNKY+FGKVTIQ+KLI GDSAGTVTAFY                              
Sbjct: 61  SSKNKYMFGKVTIQMKLIEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYSVQTNV 120

Query: 121 ------------------------------------------------------------ 152
                                                                       
Sbjct: 121 YVNGVGNREQRLNLWFDPTKEFHSYSILWTRRHVMFLVDETPIRVHSNLEHRGIPFPKDQ 180

[Close]

BLAST of Carg03152 vs. TAIR 10
Match: AT4G03210.1 (xyloglucan endotransglucosylase/hydrolase 9 )

HSP 1 Score: 147.9 bits (372), Expect = 6.6e-36
Identity = 90/283 (31.80%), Postives = 114/283 (40.28%), Query Frame = 0


Query: 7   FACVLGFFLCSLMAG-SIESRNFHDLFQPSWAFDHFIYEGELLKLRLDNSSGAGFSSKNK 66
           F CV+   +  +  G ++    F +L++ SWA DH + EGE+ KL+LDN SGAGF S++K
Sbjct: 7   FKCVMMIMVLVVSCGEAVSGAKFDELYRSSWAMDHCVNEGEVTKLKLDNYSGAGFESRSK 66

Query: 67  YLFGKVTIQIKLIAGDSAGTVTAFYCSSD------------------------------- 126
           YLFGKV+IQIKL+ GDSAGTVTAFY SSD                               
Sbjct: 67  YLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQTNIYVNGV 126

Query: 127 ------------------------------------------------------------ 149
                                                                       
Sbjct: 127 GNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVY 186

[Close]

BLAST of Carg03152 vs. TAIR 10
Match: AT4G03210.2 (xyloglucan endotransglucosylase/hydrolase 9 )

HSP 1 Score: 106.3 bits (264), Expect = 2.2e-23
Identity = 69/231 (29.87%), Postives = 82/231 (35.50%), Query Frame = 0


Query: 58  AGFSSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSD----------------------- 117
           AGF S++KYLFGKV+IQIKL+ GDSAGTVTAFY SSD                       
Sbjct: 31  AGFESRSKYLFGKVSIQIKLVEGDSAGTVTAFYMSSDGPNHNEFDFEFLGNTTGEPYIVQ 90

Query: 118 ------------------------------------------------------------ 149
                                                                       
Sbjct: 91  TNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFA 150

[Close]

BLAST of Carg03152 vs. TAIR 10
Match: AT4G25810.1 (xyloglucan endotransglycosylase 6 )

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-16
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 0


Query: 3   ASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSW--AFDHFIYEGELLKLRLDNSSGAGF 62
           A +S++ ++   L S M  S+ S NF    + +W          G+LL L LD +SG+GF
Sbjct: 2   AMISYSTIVVALLASFMICSV-SANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGF 61

Query: 63  SSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDGEKKYWWDE 104
            SKN+YLFGK+ +QIKL+AG+SAGTVTA+Y  S G     WDE
Sbjct: 62  QSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGST---WDE 100

HSP 2 Score: 40.4 bits (93), Expect = 1.5e-03
Identity = 20/54 (37.04%), Postives = 29/54 (53.70%), Query Frame = 0


Query: 92  SSDGEKKYWWDEPTMSELNLHQSHQLVWVRARHMVYDYCTDSARFPV-TPAECV 145
           S  G    W  +    EL+     Q+ WV+  +M+Y+YCTD+ RFP   P EC+
Sbjct: 235 SGQGSTGSWLSQ----ELDSTGQEQMRWVQNNYMIYNYCTDAKRFPQGLPRECL 284

[Close]

BLAST of Carg03152 vs. TAIR 10
Match: AT5G57540.1 (xyloglucan endotransglucosylase/hydrolase 13 )

HSP 1 Score: 81.6 bits (200), Expect = 5.8e-16
Identity = 42/91 (46.15%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 15  LCSLMAGSIESRNFHDLFQPSWAFD--HFIYEGELLKLRLDNSSGAGFSSKNKYLFGKVT 74
           L  L+  S+ + +F+D F  +W     + +  G+LL   LD  SG+GF SK +YLFGK+ 
Sbjct: 13  LSLLLLISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKID 72

Query: 75  IQIKLIAGDSAGTVTAFYCSSDGEKKYWWDE 104
           +++KL+AG+SAGTVTA+Y SS GE    WDE
Sbjct: 73  MKMKLVAGNSAGTVTAYYLSSKGET---WDE 100

HSP 2 Score: 42.0 bits (97), Expect = 5.1e-04
Identity = 20/54 (37.04%), Postives = 30/54 (55.56%), Query Frame = 0


Query: 91  CSSDGEKKYWWDEPTMSELNLHQSHQLVWVRARHMVYDYCTDSARFPV-TPAEC 144
           C+++     W      + LN +Q  Q+ WV+  +M+Y+YCTD  RFP   P EC
Sbjct: 234 CNANSNSWMW------TTLNSNQYGQMKWVQDDYMIYNYCTDFKRFPQGLPTEC 281

[Close]

BLAST of Carg03152 vs. TAIR 10
Match: AT4G14130.1 (xyloglucan endotransglucosylase/hydrolase 15 )

HSP 1 Score: 81.3 bits (199), Expect = 7.5e-16
Identity = 44/98 (44.90%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 1  MAASVSFACVLGFFLCSLMAGSIESRNFHDLFQPSWAFDH---FIYEGELLKLRLDNSSG 60
          M  S S   ++   L   + GS  + NF D F  +W  DH       G +L L LD  SG
Sbjct: 1  MGPSSSLTTIVATVLLVTLFGSAYASNFFDEFDLTWG-DHRGKIFNGGNMLSLSLDQVSG 60

Query: 61 AGFSSKNKYLFGKVTIQIKLIAGDSAGTVTAFYCSSDG 96
          +GF SK +YLFG++ +Q+KL+AG+SAGTVTA+Y SS G
Sbjct: 61 SGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQG 97

The following BLAST results are available for this feature:

BLAST of Carg03152 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010713.1	7.2e-85	100.00	Xyloglucan endotransglucosylase/hydrolase protein 9 [Cucurbita argyrosperma subs...	[more]
XP_023511864.1	1.3e-65	50.17	xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita pepo subsp. ...	[more]
XP_022986355.1	6.3e-65	49.83	xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita maxima]	[more]
XP_022944610.1	8.2e-65	49.83	xyloglucan endotransglucosylase/hydrolase protein 9-like [Cucurbita moschata]	[more]
XP_022140268.1	8.0e-60	45.45	xyloglucan endotransglucosylase/hydrolase protein 9-like [Momordica charantia]	[more]

BLAST of Carg03152 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDW9	9.2e-35	31.80	Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana OX=3...	[more]
Q38910	3.6e-15	45.63	Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis tha...	[more]
Q9FKL8	8.1e-15	46.15	Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis tha...	[more]
Q9ZSU4	1.1e-14	40.71	Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana OX=...	[more]
Q38911	1.1e-14	44.90	Xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Carg03152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JDU5	3.1e-65	49.83	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FYS0	4.0e-65	49.83	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1CHL9	3.9e-60	45.45	Xyloglucan endotransglucosylase/hydrolase OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1G5B5	4.4e-56	44.56	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1I7I3	5.8e-56	44.22	Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of Carg03152 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03210.1	6.6e-36	31.80	xyloglucan endotransglucosylase/hydrolase 9	[more]
AT4G03210.2	2.2e-23	29.87	xyloglucan endotransglucosylase/hydrolase 9	[more]
AT4G25810.1	2.6e-16	45.63	xyloglucan endotransglycosylase 6	[more]
AT5G57540.1	5.8e-16	46.15	xyloglucan endotransglucosylase/hydrolase 13	[more]
AT4G14130.1	7.5e-16	44.90	xyloglucan endotransglucosylase/hydrolase 15	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010713	Xyloglucan endo-transglycosylase, C-terminal	PFAM	PF06955	XET_C	coord: 97..143 e-value: 2.8E-18 score: 65.5
None	No IPR available	GENE3D	2.60.120.200		coord: 16..94 e-value: 7.6E-16 score: 60.2 coord: 95..149 e-value: 2.6E-14 score: 55.1
None	No IPR available	PANTHER	PTHR31062:SF234	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE	coord: 7..96 coord: 96..147
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 7..96
IPR044791	Beta-glucanase/XTH	PANTHER	PTHR31062	XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED	coord: 96..147
IPR000757	Glycoside hydrolase family 16	PROSITE	PS51762	GH16_2	coord: 1..151 score: 9.339915
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 41..104
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 95..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03152-RA	Carg03152-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006073	cellular glucan metabolic process
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0005618	cell wall
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function	GO:0016762	xyloglucan:xyloglucosyl transferase activity