Carg03139 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCTTCCCCTGATTTGTTTCTGTTCGTTTGGCCATTCTTCTTTCTCCTCAACATTCTGGTAACAAGGCAACTTGTATGGTTTATTACGATCTTGAATACTCCGATTTTGTTCTTTTCTGATCGAATTCAGTTTTTTGATGTGTAAATCTCTTCTTTTGAATCTGACGATTTGATTGTGTTTGGTTTTGCGACAGGTTGATTTTGCTTCTCGAAACAGTTGGAACATTTTTCGAGGGGGTTGTCTTCCAGCTTGTAGAAAATGGAGAATTCGATAGTTCAAGAGGCACTGTCTCGGCCTTTTTATACGTAGAACACTATTCCTGTTGTTGTTTGTAGATGATGGATTGATTTTTTTTTTCGTTCTTTTTCTTTGGTTCAGATATTGGAAAAGCAAGTGCTGACGGTGGCGAAGGCCGTGGAGGATAAGATCGATGACGAAATTGCAGCTATAGATCGTCTCGACCTCGATGATTTGGAGGCTTTGAGGGAGCGGAGATTGCAGCAGATGAAGAAGATGGCGGAGAAGCGTAGTCGATGGATCTCTCTTGGCCACGGCGAATACTCTGAGATTCCCGTCGAGAAGGACTTCTTCTCCATTGTCAAGGCTAGTGATCGCGTGGTCTGCCACTTTTACCGTGACAATTGGCCCTGTAAGGTAGGTTTGGTTCTATCAGTTAGCTTACTTAATCAATTATCGTTTGAATTAGTGTGCTCAATTGGATATTTTTCCCACTTAATTGTTCAAGTCGGTGATTTTTTACGGATTGTTCTTGCAATCTTTTTAGTTTTTCCAATGTCTACCAGTTAGTGCAATGATCAAATATGGCCAGGAATATGAGACATGAGTTCATTTTTATTGATGCCTCTGGTTTCTTTTTCTTGTGCATATTGTTTTCAATCTATTGCATTTAAGGGAAACGATGCATGTTCATTTACGAATCACAGGTTATGGACAAGCACTTGGGTATTTTGGCAAAGCAGCATATTGAGACACGTTTTGTCAAAATTAATGCCGAGAAAAGTCCATTTCTGGCTGAGAAGTTGAAGATCGTTGTTCTTCCAACCCTTGCTCTTATCAAGAATGCAAAAGTGGATGATTATGTGGTATGCCATTTACGATAACACACCAGTGATTACTGAATTATAGTTCATGTCCTTGTAACAGTTGCCCTCACTCATGTGAATCTATTAGGTGGGATTTGATGAGCTTGGTGGAACTGACGAGTTCAGCACAGAGGAATTGGAAGAGAGGTTGGCAAAATGTCAAGTCATCTTCTATGAAGGTGAATCGTCCATAAATGCTTCAAAATCTAATGCACAAACCAGGAGAAGTGTGCGGCAAAGCACAAGATCAGACTCATCAGATTCGGAATAAATCAACATTTCAGGTCTGCGAGGTTCTGTTCATATCTCACCCCTTGAATGCAAATTTTTACTTAATGGGTATCTCTTAAGTTCTTGCAGCAGCTGTTTTTTAGAAAGATAAAGTTCTTGGCTAGAAAAACATGACATCATCTTGTGTACTTAATGGGTATCTCACCCCTTGAATGCAAAT CTTCTCTTCCCCTGATTTGTTTCTGTTCGTTTGGCCATTCTTCTTTCTCCTCAACATTCTGGTTGATTTTGCTTCTCGAAACAGTTGGAACATTTTTCGAGGGGGTTGTCTTCCAGCTTGTAGAAAATGGAGAATTCGATAGTTCAAGAGATATTGGAAAAGCAAGTGCTGACGGTGGCGAAGGCCGTGGAGGATAAGATCGATGACGAAATTGCAGCTATAGATCGTCTCGACCTCGATGATTTGGAGGCTTTGAGGGAGCGGAGATTGCAGCAGATGAAGAAGATGGCGGAGAAGCGTAGTCGATGGATCTCTCTTGGCCACGGCGAATACTCTGAGATTCCCGTCGAGAAGGACTTCTTCTCCATTGTCAAGGCTAGTGATCGCGTGGTCTGCCACTTTTACCGTGACAATTGGCCCTGTAAGGTTATGGACAAGCACTTGGGTATTTTGGCAAAGCAGCATATTGAGACACGTTTTGTCAAAATTAATGCCGAGAAAAGTCCATTTCTGGCTGAGAAGTTGAAGATCGTTGTTCTTCCAACCCTTGCTCTTATCAAGAATGCAAAAGTGGATGATTATGTGGTGGGATTTGATGAGCTTGGTGGAACTGACGAGTTCAGCACAGAGGAATTGGAAGAGAGGTTGGCAAAATGTCAAGTCATCTTCTATGAAGGTGAATCGTCCATAAATGCTTCAAAATCTAATGCACAAACCAGGAGAAGTGTGCGGCAAAGCACAAGATCAGACTCATCAGATTCGGAATAAATCAACATTTCAGGTCTGCGAGGTTCTGTTCATATCTCACCCCTTGAATGCAAATTTTTACTTAATGGGTATCTCTTAAGTTCTTGCAGCAGCTGTTTTTTAGAAAGATAAAGTTCTTGGCTAGAAAAACATGACATCATCTTGTGTACTTAATGGGTATCTCACCCCTTGAATGCAAAT ATGGAGAATTCGATAGTTCAAGAGATATTGGAAAAGCAAGTGCTGACGGTGGCGAAGGCCGTGGAGGATAAGATCGATGACGAAATTGCAGCTATAGATCGTCTCGACCTCGATGATTTGGAGGCTTTGAGGGAGCGGAGATTGCAGCAGATGAAGAAGATGGCGGAGAAGCGTAGTCGATGGATCTCTCTTGGCCACGGCGAATACTCTGAGATTCCCGTCGAGAAGGACTTCTTCTCCATTGTCAAGGCTAGTGATCGCGTGGTCTGCCACTTTTACCGTGACAATTGGCCCTGTAAGGTTATGGACAAGCACTTGGGTATTTTGGCAAAGCAGCATATTGAGACACGTTTTGTCAAAATTAATGCCGAGAAAAGTCCATTTCTGGCTGAGAAGTTGAAGATCGTTGTTCTTCCAACCCTTGCTCTTATCAAGAATGCAAAAGTGGATGATTATGTGGTGGGATTTGATGAGCTTGGTGGAACTGACGAGTTCAGCACAGAGGAATTGGAAGAGAGGTTGGCAAAATGTCAAGTCATCTTCTATGAAGGTGAATCGTCCATAAATGCTTCAAAATCTAATGCACAAACCAGGAGAAGTGTGCGGCAAAGCACAAGATCAGACTCATCAGATTCGGAATAA MENSIVQEILEKQVLTVAKAVEDKIDDEIAAIDRLDLDDLEALRERRLQQMKKMAEKRSRWISLGHGEYSEIPVEKDFFSIVKASDRVVCHFYRDNWPCKVMDKHLGILAKQHIETRFVKINAEKSPFLAEKLKIVVLPTLALIKNAKVDDYVVGFDELGGTDEFSTEELEERLAKCQVIFYEGESSINASKSNAQTRRSVRQSTRSDSSDSE Homology
BLAST of Carg03139 vs. NCBI nr
Match: XP_022944636.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita moschata] >XP_022944637.1 thioredoxin domain-containing protein 9 homolog [Cucurbita moschata] >XP_022944638.1 thioredoxin domain-containing protein 9 homolog [Cucurbita moschata] >XP_022986377.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986378.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986379.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986380.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >XP_022986381.1 thioredoxin domain-containing protein 9 homolog [Cucurbita maxima] >KAG7010726.1 Thioredoxin domain-containing protein 9-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405.6 bits (1041), Expect = 2.6e-109 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg03139 vs. NCBI nr
Match: XP_023513333.1 (thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo] >XP_023513334.1 thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo] >XP_023513335.1 thioredoxin domain-containing protein 9 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 403.3 bits (1035), Expect = 1.3e-108 Identity = 211/213 (99.06%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg03139 vs. NCBI nr
Match: XP_008455854.1 (PREDICTED: thioredoxin domain-containing protein 9 homolog [Cucumis melo] >XP_008455855.1 PREDICTED: thioredoxin domain-containing protein 9 homolog [Cucumis melo]) HSP 1 Score: 387.9 bits (995), Expect = 5.7e-104 Identity = 201/213 (94.37%), Postives = 209/213 (98.12%), Query Frame = 0
BLAST of Carg03139 vs. NCBI nr
Match: XP_038901500.1 (thioredoxin domain-containing protein 9 homolog [Benincasa hispida]) HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103 Identity = 201/213 (94.37%), Postives = 209/213 (98.12%), Query Frame = 0
BLAST of Carg03139 vs. NCBI nr
Match: XP_011650010.1 (thioredoxin domain-containing protein 9 homolog [Cucumis sativus] >KGN63261.1 hypothetical protein Csa_021829 [Cucumis sativus]) HSP 1 Score: 386.3 bits (991), Expect = 1.7e-103 Identity = 200/213 (93.90%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy Swiss-Prot
Match: O64628 (Thioredoxin domain-containing protein 9 homolog OS=Arabidopsis thaliana OX=3702 GN=At2g18990 PE=2 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 7.8e-88 Identity = 168/208 (80.77%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy Swiss-Prot
Match: O14530 (Thioredoxin domain-containing protein 9 OS=Homo sapiens OX=9606 GN=TXNDC9 PE=1 SV=2) HSP 1 Score: 205.3 bits (521), Expect = 6.9e-52 Identity = 95/178 (53.37%), Postives = 135/178 (75.84%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy Swiss-Prot
Match: O18883 (Thioredoxin domain-containing protein 9 OS=Bos taurus OX=9913 GN=TXNDC9 PE=2 SV=2) HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50 Identity = 93/178 (52.25%), Postives = 135/178 (75.84%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy Swiss-Prot
Match: Q9CQ79 (Thioredoxin domain-containing protein 9 OS=Mus musculus OX=10090 GN=Txndc9 PE=1 SV=1) HSP 1 Score: 200.7 bits (509), Expect = 1.7e-50 Identity = 96/178 (53.93%), Postives = 133/178 (74.72%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy Swiss-Prot
Match: Q8K581 (Thioredoxin domain-containing protein 9 OS=Rattus norvegicus OX=10116 GN=Txndc9 PE=2 SV=2) HSP 1 Score: 198.4 bits (503), Expect = 8.4e-50 Identity = 95/178 (53.37%), Postives = 132/178 (74.16%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy TrEMBL
Match: A0A6J1JDW9 (thioredoxin domain-containing protein 9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111484134 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy TrEMBL
Match: A0A6J1FUY2 (thioredoxin domain-containing protein 9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111449040 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.3e-109 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy TrEMBL
Match: A0A1S3C206 (thioredoxin domain-containing protein 9 homolog OS=Cucumis melo OX=3656 GN=LOC103495950 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.8e-104 Identity = 201/213 (94.37%), Postives = 209/213 (98.12%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy TrEMBL
Match: A0A6J1CW34 (thioredoxin domain-containing protein 9 homolog OS=Momordica charantia OX=3673 GN=LOC111015098 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 8.0e-104 Identity = 204/213 (95.77%), Postives = 209/213 (98.12%), Query Frame = 0
BLAST of Carg03139 vs. ExPASy TrEMBL
Match: A0A0A0LT99 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G418960 PE=4 SV=1) HSP 1 Score: 386.3 bits (991), Expect = 8.0e-104 Identity = 200/213 (93.90%), Postives = 208/213 (97.65%), Query Frame = 0
BLAST of Carg03139 vs. TAIR 10
Match: AT2G18990.1 (thioredoxin domain-containing protein 9 homolog ) HSP 1 Score: 324.7 bits (831), Expect = 5.5e-89 Identity = 168/208 (80.77%), Postives = 188/208 (90.38%), Query Frame = 0
BLAST of Carg03139 vs. TAIR 10
Match: AT3G25580.1 (Thioredoxin superfamily protein ) HSP 1 Score: 320.9 bits (821), Expect = 8.0e-88 Identity = 165/208 (79.33%), Postives = 189/208 (90.87%), Query Frame = 0
BLAST of Carg03139 vs. TAIR 10
Match: AT3G50960.1 (phosducin-like protein 3 homolog ) HSP 1 Score: 122.5 bits (306), Expect = 4.2e-28 Identity = 76/208 (36.54%), Postives = 121/208 (58.17%), Query Frame = 0
BLAST of Carg03139 vs. TAIR 10
Match: AT5G66410.1 (phosducin-like protein 3 homolog ) HSP 1 Score: 121.7 bits (304), Expect = 7.1e-28 Identity = 76/208 (36.54%), Postives = 122/208 (58.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|