Carg03130 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03130
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Autophagy-related protein
Location	Carg_Chr20: 2959750 .. 2962133 (+)
RNA-Seq Expression	Carg03130
Synteny	Carg03130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTAACCTACAAATATCCGAAAAACTCCAATTTTGGGCTCGACCCGAACATGGCTTCCACCTCGACACCAGAGCCCATAAGACATGAACTGGGCAATCTCCATTTGAATAGATAACTTCCTGCAGGTCCATTTCGAGAGCTCGGGGATTCCAGAAGGGCCCGAGTAAGAGGTTAAAACGACTAAGGGAATAGCGATTGGGATCGGTGTTCGGGGCTGTGGAGATATTCATTGCATATATTCAACTTGAAAACGAATTTTCTCATTCTGTCTTGATTTCATTTATCACAGAGCGTTTTCTCGGTGTCTTTTGATTTGGTACTCAATAATTCGATTCCGTTGCCTCGCCGATTTCGAAAACCCCTGTGCTCCTTCTTTATTCCTTTGATTTTCTTTTGGCTGCAGGAGGCTTCTCTTTCGATGGCAAAAAGCTCGTTTAAGTTGGAGCATCCCCTGGGTTAGTTTTTTCTGTTCTTACGCAAATCGAGGGTCATATTTTGTGGTTTCTGTCAAATCTTTTGAGGGATTTTTCGTAGTTTTGAACACGCAGTTCGATTTCATCGCTTGATTCATTTAATTCCTCATACGCTATAGTCGAAATGATTGGGTTTATCCTTTTGTTTCTTGTAATTATGGATTCACCGAATGGTTGAGTTCTGATCGGGATGTTTGGTTATGTAAGGATCAATCTGTGTTCTGGTGTGGGTCTGTAGTATCAATCTGTGTTCTCTTTCATTGACAATTAGGGGAGGCGTAATGTTTTATATATATTCTTAACCCTTCCCATTACATGTGGGTTTGTATATTAATTTGATTGATGAGATTCAAACCCAAATACTTATGTTTCATGATGAACAACAAAAGATTAAAACAATCGATCAAGTTGTATGAGGGAGTTTTTTTATAGAATGTTTATTATAATCTACCAGATCAAATGGAAATAACCTTGGCCTGATATTCATACTCTCGAATAAACTCTAGAGAAGATAAGAAATTAACTTGACATTTGAATTGACATTATGAACATTCCAGAAAGAAGGCAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTATGATATTTGTAATTTATGAATGCTTGCAATTGTTTGAGTGTTCTTGTAATACGTACTTGTTTTAATGTCTGTCGGTTAACTGGTTTAGGTGATTGTGGAAAGGGCTGAAAAGAGTGATGTTCCAGAAATTGATAAGAAAAAGTAAGTTGCTCTCCGTTTTCTTACTAGCTGACGTTTCGATTTTATTTAGGATTAACTTGTTACTTTGATGTGCTTTCCAAATCTATAAGTATCTTTCAAATGGGAAGTAAAACGAGCGAATTTTGTGAATGCTGAAATGCTGTTCTTTATAGTGTTCTAGATTGATGGCGACGTATGAATGTTTTCAGTATTGCTAATGTTTTTCGAGGTTTAGTGTTTCTCGAGCGTTGGTAACTAGACCATTTTGTAACTATGACATTCGTCTAGTTGTTTTGGAACGGAGTTCTTTTTGTAGTTAGTATTGAACTCTTGCTTTTCTGAGGCTTGTTTCTTGTACGCCCTTGTATTGCTTCATTTTTTCTATGGAAGGTTGGTTTGTTATCCAAAAAGAATCGGTCTTTCAAGTGTTGTATGGCTTGTCTTATTGAGTCGGAGGTCAATATGAAGTTATTTATATTGTTGTTTGTACTTTCGAACGTTTCTTGGGTTAACGATGTTCTAGCTATTTTAATCTCCGTATCACGTTCAAAGGAATCAAATGTAACCACATTGAGATTGAATGGAATATCTATATGTTCAAAACAATGTTGGCTAGTGGAGGCTAGTGGGGGACGTGGATTGATAGATCTCTATTTTTGTTTCGAGTAGCGAAGATGACTATAGATTGTGTAGTAGAAGAACGATGCTGTTTGAGGGTCTAAAAGCGATGTTTCTGAACCTGAAAATGGATAATATCGAGAAGCGTTGCAAGGATTTGATAACTAGATGAGCTATCGGTGCAGAAAACCGTTAATGTTATCTATAGGAAAGTTATGTTACTGTCTTTATTGATTGCAGATATTTAGTCCCTGCTGATTTAACTGTGGGTCAGTTCGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTCATTTTTGTGAAGAATATTTTGCCCCCTACCGGTGAGAACTTGTACTTTGGGAATGTGTTCTTATCATATTTTGTGCATAATCTTCACATTTATCATTTTTCTGGTTCTGAACGTTTGTTCGGTCGGTCTGCAGCTGCTATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGTTTCCTGTATATGACCTACAGCGGGGAAAACACGTTCGGGGCGTGCTGA

mRNA sequence

TTTTAACCTACAAATATCCGAAAAACTCCAATTTTGGGCTCGACCCGAACATGGCTTCCACCTCGACACCAGAGCCCATAAGACATGAACTGGGCAATCTCCATTTGAATAGATAACTTCCTGCAGGTCCATTTCGAGAGCTCGGGGATTCCAGAAGGGCCCGAGTAAGAGGTTAAAACGACTAAGGGAATAGCGATTGGGATCGGTGTTCGGGGCTGTGGAGATATTCATTGCATATATTCAACTTGAAAACGAATTTTCTCATTCTGTCTTGATTTCATTTATCACAGAGCGTTTTCTCGGTGTCTTTTGATTTGGAGGCTTCTCTTTCGATGGCAAAAAGCTCGTTTAAGTTGGAGCATCCCCTGGGTTAGTTTTTTCTGTTCTTACGCAAATCGAGGGTCATATTTTGTGGTTTCTGTCAAATCTTTTGAGGGATTTTTCGTAGTTTTGAACACGCAGTTCGATTTCATCGCTTGATTCATTTAATTCCTCATACGCTATAGTCGAAATGATTGGGTTTATCCTTTTGTTTCTTGTAATTATGGATTCACCGAATGGTTGAGTTCTGATCGGGATGTTTGGTTATGTAAGGATCAATCTGTGTTCTGGTGTGGGTCTGTAGTATCAATCTGTGTTCTCTTTCATTGACAATTAGGGGAGGCGTAATGTTTTATATATATTCTTAACCCTTCCCATTACATGTGGGTTTGTATATTAATTTGATTGATGAGATTCAAACCCAAATACTTATGTTTCATGATGAACAACAAAAGATTAAAACAATCGATCAAGTTGTATGAGGGAGTTTTTTTATAGAATGTTTATTATAATCTACCAGATCAAATGGAAATAACCTTGGCCTGATATTCATACTCTCGAATAAACTCTAGAGAAGATAAGAAATTAACTTGACATTTGAATTGACATTATGAACATTCCAGAAAGAAGGCAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATTGTGGAAAGGGCTGAAAAGAGTGATGTTCCAGAAATTGATAAGAAAAAATATTTAGTCCCTGCTGATTTAACTGTGGGTCAGTTCGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTCATTTTTGTGAAGAATATTTTGCCCCCTACCGCTGCTATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGTTTCCTGTATATGACCTACAGCGGGGAAAACACGTTCGGGGCGTGCTGA

Coding sequence (CDS)

ATGAACATTCCAGAAAGAAGGCAGGTTGAATCTGCTAGGATCCGAGAGAAGTATCCTGACAGAATTCCGGTGATTGTGGAAAGGGCTGAAAAGAGTGATGTTCCAGAAATTGATAAGAAAAAATATTTAGTCCCTGCTGATTTAACTGTGGGTCAGTTCGTGTACGTGGTCCGAAAGAGGATCAAGCTCAGCCCTGAGAAGGCCATCTTCATTTTTGTGAAGAATATTTTGCCCCCTACCGCTGCTATGATGTCTGCAATTTATGAGGAAAACAAGGATGAAGATGGTTTCCTGTATATGACCTACAGCGGGGAAAACACGTTCGGGGCGTGCTGA

Protein sequence

MNIPERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC

Homology

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BLAST of Carg03130 vs. NCBI nr
Match: KAG7010735.1 (Autophagy-related protein 8c [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.7 bits (561), Expect = 6.3e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0


Query: 1   MNIPERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKR 60
           MNIPERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKR
Sbjct: 1   MNIPERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKR 60

Query: 61  IKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           IKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 61  IKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 111

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BLAST of Carg03130 vs. NCBI nr
Match: KAA0059575.1 (Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK24205.1 Ubiquitin-like superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 212.2 bits (539), Expect = 2.2e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 19  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 78

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 79  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 125

[Close]

BLAST of Carg03130 vs. NCBI nr
Match: KAG6570885.1 (NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.2 bits (539), Expect = 2.2e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5    ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
            ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 1000 ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 1059

Query: 65   PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
            PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 1060 PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 1106

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BLAST of Carg03130 vs. NCBI nr
Match: XP_004151892.1 (autophagy-related protein 8C-like [Cucumis sativus] >XP_008455886.1 PREDICTED: autophagy-related protein 8c [Cucumis melo] >XP_022943693.1 autophagy-related protein 8c [Cucurbita moschata] >XP_022943694.1 autophagy-related protein 8c [Cucurbita moschata] >XP_022986404.1 autophagy-related protein 8c [Cucurbita maxima] >XP_038902002.1 autophagy-related protein 8C-like isoform X1 [Benincasa hispida] >KGN63248.1 hypothetical protein Csa_022236 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 2.2e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 73  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

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BLAST of Carg03130 vs. NCBI nr
Match: XP_023512507.1 (autophagy-related protein 8c [Cucurbita pepo subsp. pepo] >XP_023512508.1 autophagy-related protein 8c [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.3 bits (534), Expect = 8.5e-51
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG C
Sbjct: 73  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGEC 119

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BLAST of Carg03130 vs. ExPASy Swiss-Prot
Match: Q8S927 (Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-49
Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 110
            EKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct: 73  AEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Carg03130 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-49
Identity = 97/106 (91.51%), Postives = 104/106 (98.11%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQ E+ARIREKYPDRIPVIVE+AE+SD+P+IDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 111
            EKAIFIFVKNILPPTAAMMSAIYEE+KDEDGFLYMTYSGENTFG+
Sbjct: 73  AEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of Carg03130 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 2.8e-49
Identity = 97/105 (92.38%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           E+RQ E+ARIREKYPDRIPVIVERAEKSDVP+ID+KKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 110
           PEKAIFIFVKNILPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 73  PEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Carg03130 vs. ExPASy Swiss-Prot
Match: Q2XPP5 (Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.3e-49
Identity = 96/106 (90.57%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQ ESARIREKY DRIPVIVE+A+K+DVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 111
           PEKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG+
Sbjct: 73  PEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of Carg03130 vs. ExPASy Swiss-Prot
Match: Q69RC4 (Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 6.3e-49
Identity = 96/106 (90.57%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQ ESARIREKY DRIPVIVE+A+K+DVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 111
           PEKAIF+FVKN LPPTA++MSAIYEENKDEDGFLYMTYSGENTFG+
Sbjct: 73  PEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118

[Close]

BLAST of Carg03130 vs. ExPASy TrEMBL
Match: A0A6J1FV37 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111448369 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 73  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Carg03130 vs. ExPASy TrEMBL
Match: A0A5A7V165 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00050 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 19  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 78

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 79  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 125

[Close]

BLAST of Carg03130 vs. ExPASy TrEMBL
Match: A0A6J1JFZ0 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111484151 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 73  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Carg03130 vs. ExPASy TrEMBL
Match: A0A0A0LN58 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G418350 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 73  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Carg03130 vs. ExPASy TrEMBL
Match: A0A1S3C2M9 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103495965 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 112
           PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC
Sbjct: 73  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGAC 119

[Close]

BLAST of Carg03130 vs. TAIR 10
Match: AT1G62040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-50
Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  ERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 110
            EKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct: 73  AEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of Carg03130 vs. TAIR 10
Match: AT1G62040.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-50
Identity = 97/105 (92.38%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ERRQ+ES+RIREKYPDRIPVIVERAE+SDVP IDKKKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 27  ERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQFVYVVRKRIKLS 86

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 110
            EKAIF+FVKN LPPTAAMMSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct: 87  AEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131

[Close]

BLAST of Carg03130 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 195.7 bits (496), Expect = 2.0e-50
Identity = 97/105 (92.38%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           E+RQ E+ARIREKYPDRIPVIVERAEKSDVP+ID+KKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 13  EKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLS 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 110
           PEKAIFIFVKNILPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 73  PEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 117

[Close]

BLAST of Carg03130 vs. TAIR 10
Match: AT2G05630.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 5.9e-50
Identity = 96/105 (91.43%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           ++RQ E+ARIREKYPDRIPVIVERAEKSDVP+ID+KKYLVPADLTVGQFVYVVRKRIKLS
Sbjct: 57  KKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLS 116

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFG 110
           PEKAIFIFVKNILPPTAA+MSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 117 PEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 161

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BLAST of Carg03130 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.4e-46
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 5   ERRQVESARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLS 64
           E R  ES+RIREKYPDRIPVIVE+A +SDVP+IDKKKYLVPADLTVGQFVYVVRKRIKL 
Sbjct: 13  EARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQFVYVVRKRIKLG 72

Query: 65  PEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGA 111
            EKAIF+FVKN LPPTAA+MSAIYEE+KDEDGFLYMTYSGENTFG+
Sbjct: 73  AEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 118

The following BLAST results are available for this feature:

BLAST of Carg03130 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7010735.1	6.3e-54	100.00	Autophagy-related protein 8c [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAA0059575.1	2.2e-51	100.00	Ubiquitin-like superfamily protein [Cucumis melo var. makuwa] >TYK24205.1 Ubiqui...	[more]
KAG6570885.1	2.2e-51	100.00	NEDD8-activating enzyme E1 regulatory subunit AXR1, partial [Cucurbita argyrospe...	[more]
XP_004151892.1	2.2e-51	100.00	autophagy-related protein 8C-like [Cucumis sativus] >XP_008455886.1 PREDICTED: a...	[more]
XP_023512507.1	8.5e-51	99.07	autophagy-related protein 8c [Cucurbita pepo subsp. pepo] >XP_023512508.1 autoph...	[more]

BLAST of Carg03130 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S927	2.8e-49	92.38	Autophagy-related protein 8c OS=Arabidopsis thaliana OX=3702 GN=ATG8C PE=1 SV=1	[more]
M1C146	2.8e-49	91.51	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
Q9SL04	2.8e-49	92.38	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]
Q2XPP5	6.3e-49	90.57	Autophagy-related protein 8A OS=Oryza sativa subsp. indica OX=39946 GN=ATG8A PE=...	[more]
Q69RC4	6.3e-49	90.57	Autophagy-related protein 8A OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8A P...	[more]

BLAST of Carg03130 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FV37	1.1e-51	100.00	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111448369 PE=3 SV=...	[more]
A0A5A7V165	1.1e-51	100.00	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1JFZ0	1.1e-51	100.00	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111484151 PE=3 SV=1	[more]
A0A0A0LN58	1.1e-51	100.00	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_2G418350 PE=3 SV=1	[more]
A0A1S3C2M9	1.1e-51	100.00	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103495965 PE=3 SV=1	[more]

BLAST of Carg03130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62040.1	2.0e-50	92.38	Ubiquitin-like superfamily protein	[more]
AT1G62040.2	2.0e-50	92.38	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	2.0e-50	92.38	Ubiquitin-like superfamily protein	[more]
AT2G05630.2	5.9e-50	91.43	Ubiquitin-like superfamily protein	[more]
AT4G21980.1	1.4e-46	85.85	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.90		coord: 2..110 e-value: 1.7E-55 score: 188.3
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 5..109
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 5..106 e-value: 3.32322E-70 score: 203.076
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 6..109 e-value: 4.2E-52 score: 174.7
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 5..109
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03130-RA	Carg03130-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule