Carg03086 (gene) Silver-seed gourd (SMH-JMG-627) v2

BLAST of Carg03086 vs. NCBI nr
Match: KAG7024658.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 388.3 bits (996), Expect = 3.8e-104
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0

Query: 1   QARDLFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLRKWWTFFV 60
           QARDLFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLRKWWTFFV
Sbjct: 1   QARDLFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLRKWWTFFV 60

Query: 61  GIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNLKEEMVTNKVVPGMQY 120
           GIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNLKEEMVTNKVVPGMQY
Sbjct: 61  GIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNLKEEMVTNKVVPGMQY 120

Query: 121 GAFGTVLNSLVRGNGMNVAIWTSFVCKESLSEASNNASQLAAVHHQRHGPDEHHKQHKEL 180
           GAFGTVLNSLVRGNGMNVAIWTSFVCKESLSEASNNASQLAAVHHQRHGPDEHHKQHKEL
Sbjct: 121 GAFGTVLNSLVRGNGMNVAIWTSFVCKESLSEASNNASQLAAVHHQRHGPDEHHKQHKEL 180

Query: 181 PLEA 185
           PLEA
Sbjct: 181 PLEA 184

BLAST of Carg03086 vs. NCBI nr
Match: XP_022941521.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita moschata])

HSP 1 Score: 156.8 bits (395), Expect = 1.8e-34
Identity = 76/106 (71.70%), Postives = 86/106 (81.13%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVFDKIPSFGCKRTV SANSLLDA L+     K    F
Sbjct: 103 IFC---NVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLKCREFEKMAEVF 162

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGNYGSP++CTFNILIHAACLCGDLD AW+VFDEMP+RG+ PN+
Sbjct: 163 VGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNV 205

BLAST of Carg03086 vs. NCBI nr
Match: KAG7037464.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 156.0 bits (393), Expect = 3.1e-34
Identity = 76/106 (71.70%), Postives = 85/106 (80.19%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVFDKIPSFGCKRTV SANSLLDA L+     K    F
Sbjct: 85  IFC---NVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLKCREFEKMAEVF 144

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGNYGSP++CTFNILIHAACLCGDLD AW+VFDEMP+RG  PN+
Sbjct: 145 VGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAKPNV 187

BLAST of Carg03086 vs. NCBI nr
Match: KAG6607949.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 155.2 bits (391), Expect = 5.4e-34
Identity = 75/106 (70.75%), Postives = 86/106 (81.13%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVFDKIPSFGCKRTV SANSLLDA L+     K    F
Sbjct: 85  IFC---NVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLKCREFEKMAEVF 144

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGNYGSP++C+FNILIHAACLCGDLD AW+VFDEMP+RG+ PN+
Sbjct: 145 VGIGNYGSPDACSFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNV 187

BLAST of Carg03086 vs. NCBI nr
Match: XP_022982178.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita maxima])

HSP 1 Score: 154.5 bits (389), Expect = 9.2e-34
Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVFDKIPS+GCKRTV SANSLLDA L+     +    F
Sbjct: 85  IFC---NVISFYGRARLLDRAFQVFDKIPSYGCKRTVKSANSLLDALLKCREFERMAEVF 144

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGNYGSP++CTFNILIHAACLCGDLD AW+VFDEMP+RG+ PN+
Sbjct: 145 VGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNV 187

BLAST of Carg03086 vs. ExPASy Swiss-Prot
Match: Q9MAG8 (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.8e-14
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + FFGR +   RA  +FD++P + C+RTV S NSLL A L+     K     
Sbjct: 85  IFC---NVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERL 144

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNP 104
             I  +G P++CT+NILIH     G  D A  +FDEM ++ + P
Sbjct: 145 SSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKP 185

BLAST of Carg03086 vs. ExPASy Swiss-Prot
Match: Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLRK------WWTFFVGIGNYG-SP 75
           +G A   + + ++F +IP FG KR+V S N+LL+  ++          F     ++G +P
Sbjct: 130 YGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP 189

Query: 76  NSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           N  T N+L+ A C   D+++A+ V DE+P  GL PNL
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNL 226

BLAST of Carg03086 vs. ExPASy Swiss-Prot
Match: Q9LQQ1 (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAF-----LRKWWTFFVGIGNYG-SPN 75
           +G+A   D+A  VF KI SF C RT+ S N+L++       L K  +FF G  +    PN
Sbjct: 126 YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185

Query: 76  SCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           S +FNILI       D +AA  VFDEM +  + P++
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221

BLAST of Carg03086 vs. ExPASy Swiss-Prot
Match: Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.6e-07
Identity = 33/96 (34.38%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLRK-----WWTFFVGIGNYG-SPN 75
           + R R A  A +VFD++    C   +++ N+LLDA  +       +  F  +GN G  P+
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277

Query: 76  SCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           + +F I IHA C  GD+ +A+ V D M +  L PN+
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313

BLAST of Carg03086 vs. ExPASy Swiss-Prot
Match: Q0WPZ6 (Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana OX=3702 GN=At2g17140 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.9e-06
Identity = 35/101 (34.65%), Postives = 53/101 (52.48%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSF--GCKRTVISANSLLDAFLRKWWTFFV----------GIG 75
           F ++ H D+AF  F  + S     K +V   N LL++ +++    FV          GI 
Sbjct: 85  FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI- 144

Query: 76  NYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPN 105
              +P + TFN+LI A C    +DAA ++FDEMP++G  PN
Sbjct: 145 ---APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPN 181

BLAST of Carg03086 vs. ExPASy TrEMBL
Match: A0A6J1FLC2 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita moschata OX=3662 GN=LOC111446799 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 8.9e-35
Identity = 76/106 (71.70%), Postives = 86/106 (81.13%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVFDKIPSFGCKRTV SANSLLDA L+     K    F
Sbjct: 103 IFC---NVISFYGRARLLDRAFQVFDKIPSFGCKRTVKSANSLLDALLKCREFEKMAEVF 162

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGNYGSP++CTFNILIHAACLCGDLD AW+VFDEMP+RG+ PN+
Sbjct: 163 VGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNV 205

BLAST of Carg03086 vs. ExPASy TrEMBL
Match: A0A6J1J467 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita maxima OX=3661 GN=LOC111481084 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 4.4e-34
Identity = 74/106 (69.81%), Postives = 86/106 (81.13%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVFDKIPS+GCKRTV SANSLLDA L+     +    F
Sbjct: 85  IFC---NVISFYGRARLLDRAFQVFDKIPSYGCKRTVKSANSLLDALLKCREFERMAEVF 144

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGNYGSP++CTFNILIHAACLCGDLD AW+VFDEMP+RG+ PN+
Sbjct: 145 VGIGNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNV 187

BLAST of Carg03086 vs. ExPASy TrEMBL
Match: A0A5A7VBA5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004190 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.9e-30
Identity = 68/106 (64.15%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVF++IP+F CKRTV S NSLLDA L+     K     
Sbjct: 103 IFC---NVIAFYGRARLPDRAFQVFERIPTFRCKRTVKSVNSLLDALLKSREFGKMMEVL 162

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGN+GSP++CTFNILIHAACLCGDLDA W VFDEM +RG+ PN+
Sbjct: 163 VGIGNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRKRGVQPNV 205

BLAST of Carg03086 vs. ExPASy TrEMBL
Match: A0A1S3BT71 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo OX=3656 GN=LOC103493464 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.9e-30
Identity = 68/106 (64.15%), Postives = 81/106 (76.42%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVF++IP+F CKRTV S NSLLDA L+     K     
Sbjct: 151 IFC---NVIAFYGRARLPDRAFQVFERIPTFRCKRTVKSVNSLLDALLKSREFGKMMEVL 210

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIGN+GSP++CTFNILIHAACLCGDLDA W VFDEM +RG+ PN+
Sbjct: 211 VGIGNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRKRGVQPNV 253

BLAST of Carg03086 vs. ExPASy TrEMBL
Match: A0A6J1BRW9 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Momordica charantia OX=3673 GN=LOC111004838 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29
Identity = 68/106 (64.15%), Postives = 83/106 (78.30%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + F+GRAR  DRAFQVF++IPSFGC RTV SANSLLDA L+     K    F
Sbjct: 85  IFC---NVISFYGRARLPDRAFQVFERIPSFGCNRTVKSANSLLDALLKCREFEKMAEVF 144

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           VGIG+YGSP++CTFNILIHAA LCG+ D AW+VFDEM +RG++PN+
Sbjct: 145 VGIGSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNV 187

BLAST of Carg03086 vs. TAIR 10
Match: AT1G53330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 2.7e-15
Identity = 42/104 (40.38%), Postives = 59/104 (56.73%), Query Frame = 0

Query: 5   LFCSSRNHLLFFGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLR-----KWWTFF 64
           +FC   N + FFGR +   RA  +FD++P + C+RTV S NSLL A L+     K     
Sbjct: 85  IFC---NVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERL 144

Query: 65  VGIGNYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNP 104
             I  +G P++CT+NILIH     G  D A  +FDEM ++ + P
Sbjct: 145 SSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKP 185

BLAST of Carg03086 vs. TAIR 10
Match: AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10
Identity = 38/96 (39.58%), Postives = 53/96 (55.21%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAF-----LRKWWTFFVGIGNYG-SPN 75
           +G+A   D+A  VF KI SF C RT+ S N+L++       L K  +FF G  +    PN
Sbjct: 126 YGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPN 185

Query: 76  SCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           S +FNILI       D +AA  VFDEM +  + P++
Sbjct: 186 SVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSV 221

BLAST of Carg03086 vs. TAIR 10
Match: AT5G16420.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10
Identity = 34/97 (35.05%), Postives = 55/97 (56.70%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLRK------WWTFFVGIGNYG-SP 75
           +G A   + + ++F +IP FG KR+V S N+LL+  ++          F     ++G +P
Sbjct: 130 YGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITP 189

Query: 76  NSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           N  T N+L+ A C   D+++A+ V DE+P  GL PNL
Sbjct: 190 NIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNL 226

BLAST of Carg03086 vs. TAIR 10
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-08
Identity = 33/96 (34.38%), Postives = 52/96 (54.17%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSFGCKRTVISANSLLDAFLRK-----WWTFFVGIGNYG-SPN 75
           + R R A  A +VFD++    C   +++ N+LLDA  +       +  F  +GN G  P+
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277

Query: 76  SCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPNL 106
           + +F I IHA C  GD+ +A+ V D M +  L PN+
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNV 313

BLAST of Carg03086 vs. TAIR 10
Match: AT2G17140.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 53.5 bits (127), Expect = 2.1e-07
Identity = 35/101 (34.65%), Postives = 53/101 (52.48%), Query Frame = 0

Query: 16  FGRARHADRAFQVFDKIPSF--GCKRTVISANSLLDAFLRKWWTFFV----------GIG 75
           F ++ H D+AF  F  + S     K +V   N LL++ +++    FV          GI 
Sbjct: 85  FAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGI- 144

Query: 76  NYGSPNSCTFNILIHAACLCGDLDAAWDVFDEMPQRGLNPN 105
              +P + TFN+LI A C    +DAA ++FDEMP++G  PN
Sbjct: 145 ---APQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPN 181