Carg03058 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03058
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	VQ domain-containing protein
Location	Carg_Chr09: 3253177 .. 3254155 (-)
RNA-Seq Expression	Carg03058
Synteny	Carg03058

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCCGGCAGCCCAAGTTTGCAATCCTCCAGCGGCGCCGATGAAGATTACGACTCTCATCACGCTTTTCCCCCGCCGCCACCACTTTTCTTCAACCCCAATTCCTACCAGACCCACCTCCTACCCTCCTCCCCTTTCTACGATTTCCCCTCCGATTACGCTTTCAACAACCCTTCCAACGCCGGAACATCTGAACCCGCCGCCGCGGAACCCACCCAAAACCAAATCCCAATTCGCTCATCTGGGGTTTTGCATCCCAAAGCCACTACAAAGAAGAGAACTAGAGCCTCACGGAGAGCTCCCACCACCGTTCTCACAACCGACACTACGAATTTCCGTGCTATGGTGCAAGAGTTCACCGGAATCCCTTCCCCGCCGTTTACCGCTGGTGGGTCATCCTATTCCCGCCGATTTGATCTCTTTAACTTGGTTAAAACAACCAGCTCCACACCCTCTATTCTAGAAACTTCTGGATCGGGTCTTTACTCTTCTCGTGTGGTAAAGACACAGGCTGCTATCAGGGCTGATTTAGACGCGCCCCACGATTGTACAAGCCCACTGTTCGTGTCAGCCGCGCTGCAAAATGATGAAACCTGGAGAACCAATAGCAGTGGTACCGCACCAGGTGAATTTCACCGGTCGTTGCTTCAATAATTTGCAGCGTGACAAAGGGAATATTATTGGACGTCTATGATCACTACTCTCTACGACAGTATGATATTGTCTACTTTGAGCATAAATTCTAAGCCTCGTATCAATGGAGATGTATTTTAAGGAAGATTTTGAAAAATGGCATTGACCCACTCCAACGGCAGCTGCCATCTCCGATCCGAATGGGACCCGCTAAAATTTAAATATTAATATGATGATCTACTAAAAATCTTTTGATTTAAGCTTTCTTATTGTTCACTTAATTTTGTTGATAGCGATGTTTGTTATTATTGTTAATATCTAAGATTCATATCCTATGTTTTAA

mRNA sequence

ATGGATTCCGGCAGCCCAAGTTTGCAATCCTCCAGCGGCGCCGATGAAGATTACGACTCTCATCACGCTTTTCCCCCGCCGCCACCACTTTTCTTCAACCCCAATTCCTACCAGACCCACCTCCTACCCTCCTCCCCTTTCTACGATTTCCCCTCCGATTACGCTTTCAACAACCCTTCCAACGCCGGAACATCTGAACCCGCCGCCGCGGAACCCACCCAAAACCAAATCCCAATTCGCTCATCTGGGGTTTTGCATCCCAAAGCCACTACAAAGAAGAGAACTAGAGCCTCACGGAGAGCTCCCACCACCGTTCTCACAACCGACACTACGAATTTCCGTGCTATGGTGCAAGAGTTCACCGGAATCCCTTCCCCGCCGTTTACCGCTGGTGGGTCATCCTATTCCCGCCGATTTGATCTCTTTAACTTGGTTAAAACAACCAGCTCCACACCCTCTATTCTAGAAACTTCTGGATCGGGTCTTTACTCTTCTCGTGTGGTAAAGACACAGGCTGCTATCAGGGCTGATTTAGACGCGCCCCACGATTGTACAAGCCCACTGTTCGTGTCAGCCGCGCTGCAAAATGATGAAACCTGGAGAACCAATAGCAGTGATTCATATCCTATGTTTTAA

Coding sequence (CDS)

ATGGATTCCGGCAGCCCAAGTTTGCAATCCTCCAGCGGCGCCGATGAAGATTACGACTCTCATCACGCTTTTCCCCCGCCGCCACCACTTTTCTTCAACCCCAATTCCTACCAGACCCACCTCCTACCCTCCTCCCCTTTCTACGATTTCCCCTCCGATTACGCTTTCAACAACCCTTCCAACGCCGGAACATCTGAACCCGCCGCCGCGGAACCCACCCAAAACCAAATCCCAATTCGCTCATCTGGGGTTTTGCATCCCAAAGCCACTACAAAGAAGAGAACTAGAGCCTCACGGAGAGCTCCCACCACCGTTCTCACAACCGACACTACGAATTTCCGTGCTATGGTGCAAGAGTTCACCGGAATCCCTTCCCCGCCGTTTACCGCTGGTGGGTCATCCTATTCCCGCCGATTTGATCTCTTTAACTTGGTTAAAACAACCAGCTCCACACCCTCTATTCTAGAAACTTCTGGATCGGGTCTTTACTCTTCTCGTGTGGTAAAGACACAGGCTGCTATCAGGGCTGATTTAGACGCGCCCCACGATTGTACAAGCCCACTGTTCGTGTCAGCCGCGCTGCAAAATGATGAAACCTGGAGAACCAATAGCAGTGATTCATATCCTATGTTTTAA

Protein sequence

MDSGSPSLQSSSGADEDYDSHHAFPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPSNAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRADLDAPHDCTSPLFVSAALQNDETWRTNSSDSYPMF

Homology

[Close]

BLAST of Carg03058 vs. NCBI nr
Match: KAG7024630.1 (hypothetical protein SDJN02_13448, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 417.2 bits (1071), Expect = 8.7e-113
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHHAFPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPS 60
           MDSGSPSLQSSSGADEDYDSHHAFPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPS
Sbjct: 1   MDSGSPSLQSSSGADEDYDSHHAFPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPS 60

Query: 61  NAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 120
           NAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEF
Sbjct: 61  NAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 120

Query: 121 TGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRADLDA 180
           TGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRADLDA
Sbjct: 121 TGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRADLDA 180

Query: 181 PHDCTSPLFVSAALQNDETWRTNSSDSYPMF 212
           PHDCTSPLFVSAALQNDETWRTNSSDSYPMF
Sbjct: 181 PHDCTSPLFVSAALQNDETWRTNSSDSYPMF 211

[Close]

BLAST of Carg03058 vs. NCBI nr
Match: KAG6591747.1 (hypothetical protein SDJN03_14093, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405.2 bits (1040), Expect = 3.4e-109
Identity = 206/209 (98.56%), Postives = 207/209 (99.04%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHHAFPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPS 60
           MDSGSPSLQSSSGADEDYDSHHAFPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPS
Sbjct: 1   MDSGSPSLQSSSGADEDYDSHHAFPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPS 60

Query: 61  NAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 120
           NAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEF
Sbjct: 61  NAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEF 120

Query: 121 TGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRADLDA 180
           TGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRADLDA
Sbjct: 121 TGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRADLDA 180

Query: 181 PHDCTSPLFVSAALQNDETWRTNSSDSYP 210
           PHDCTSPLFVSAALQNDETWRTNSS + P
Sbjct: 181 PHDCTSPLFVSAALQNDETWRTNSSGTAP 209

[Close]

BLAST of Carg03058 vs. NCBI nr
Match: XP_023536151.1 (uncharacterized protein LOC111797394 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 198/213 (92.96%), Postives = 201/213 (94.37%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHHAF----PPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAF 60
           MDSGSPSLQSSSG +EDYDSHH F    PPPPPLFFNPNSYQTHLLPSSPFYDFPSDY F
Sbjct: 1   MDSGSPSLQSSSGGEEDYDSHHPFPPPPPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYTF 60

Query: 61  NNPSNAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAM 120
           NNPSNAGTSEPAAA+PTQNQ PIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAM
Sbjct: 61  NNPSNAGTSEPAAADPTQNQFPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAM 120

Query: 121 VQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRA 180
           VQEFTGIPSPPFT GGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRA
Sbjct: 121 VQEFTGIPSPPFTTGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRA 180

Query: 181 DLDAPHDCTSPLFVSAALQNDETWRTNSSDSYP 210
           DLDAPHD TSPLFVSAALQNDETWRTNSS + P
Sbjct: 181 DLDAPHDSTSPLFVSAALQNDETWRTNSSGTAP 213

[Close]

BLAST of Carg03058 vs. NCBI nr
Match: XP_022975920.1 (uncharacterized protein LOC111476479 [Cucurbita maxima])

HSP 1 Score: 366.7 bits (940), Expect = 1.3e-97
Identity = 191/208 (91.83%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHHAF---PPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFN 60
           MDSGSPSLQSSSG DEDYDSH  F   PPPPPLFFNPNSYQTHLLPSSPFYDFPSDY F 
Sbjct: 1   MDSGSPSLQSSSGGDEDYDSHQPFPPPPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYTF- 60

Query: 61  NPSNAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMV 120
           NPSN+GTS+PAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMV
Sbjct: 61  NPSNSGTSQPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMV 120

Query: 121 QEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRAD 180
           QEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTP+ILETSGSGLYSSRVVKTQAAIRAD
Sbjct: 121 QEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPTILETSGSGLYSSRVVKTQAAIRAD 180

Query: 181 LDAPHDCTSPLFVSAALQNDETWRTNSS 206
           LDAPH+ TSPL VSA LQNDETWR+N+S
Sbjct: 181 LDAPHNRTSPLLVSAVLQNDETWRSNTS 207

[Close]

BLAST of Carg03058 vs. NCBI nr
Match: XP_038898813.1 (uncharacterized serine-rich protein C215.13-like [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 9.5e-43
Identity = 144/302 (47.68%), Postives = 153/302 (50.66%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADE----DYDSHH--AFPPPPPLFFN--------------------- 60
           MDSGS SLQSSSGADE    D  SHH     PPPPLFFN                     
Sbjct: 1   MDSGSGSLQSSSGADEVEEYDSSSHHQPQLFPPPPLFFNNNIIPFSSSSSSSSSSSSSSS 60

Query: 61  -------------------PNSYQT-HLLPSSPFYDFPSDYAFNNPSNAGTS-------- 120
                              P  YQ  HLLPS  FYDFPS Y   NP N+  S        
Sbjct: 61  SSSSSLLGCSSSSSIPHQLPFHYQNHHLLPS--FYDFPSSYHNFNPDNSSNSFVNLDVLR 120

Query: 121 --------EPAAAEPTQNQIPIR-----SSGVLHPKATTKKRTRASRRAPTTVLTTDTTN 180
                    P +   TQNQI IR     SSG LHPK TTKKRTRASRRAPTTVLTTDTTN
Sbjct: 121 SEPTHFKNPPISDGSTQNQIQIRSTPSSSSGALHPKVTTKKRTRASRRAPTTVLTTDTTN 180

Query: 181 FRAMVQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSR-----V 204
           FRAMVQEFTGIPSPPFTAGGSSYSRRFDLF LV+T +S  + LE SG G+Y SR     V
Sbjct: 181 FRAMVQEFTGIPSPPFTAGGSSYSRRFDLFGLVRTNNSAATNLEASGLGVYPSRSKVDNV 240

[Close]

BLAST of Carg03058 vs. ExPASy Swiss-Prot
Match: Q9LIE6 (VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-06
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 91  TKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSS 150
           T++R+RASRR PTT+L TDT+NFRAMVQ++TG PS      G++ S     F+L  T+SS
Sbjct: 54  TRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTS----AFSL--TSSS 110

Query: 151 TPS 154
            PS
Sbjct: 114 DPS 110

[Close]

BLAST of Carg03058 vs. ExPASy TrEMBL
Match: A0A6J1II30 (uncharacterized protein LOC111476479 OS=Cucurbita maxima OX=3661 GN=LOC111476479 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.5e-98
Identity = 191/208 (91.83%), Postives = 197/208 (94.71%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHHAF---PPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFN 60
           MDSGSPSLQSSSG DEDYDSH  F   PPPPPLFFNPNSYQTHLLPSSPFYDFPSDY F 
Sbjct: 1   MDSGSPSLQSSSGGDEDYDSHQPFPPPPPPPPLFFNPNSYQTHLLPSSPFYDFPSDYTF- 60

Query: 61  NPSNAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMV 120
           NPSN+GTS+PAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMV
Sbjct: 61  NPSNSGTSQPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMV 120

Query: 121 QEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSRVVKTQAAIRAD 180
           QEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTP+ILETSGSGLYSSRVVKTQAAIRAD
Sbjct: 121 QEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPTILETSGSGLYSSRVVKTQAAIRAD 180

Query: 181 LDAPHDCTSPLFVSAALQNDETWRTNSS 206
           LDAPH+ TSPL VSA LQNDETWR+N+S
Sbjct: 181 LDAPHNRTSPLLVSAVLQNDETWRSNTS 207

[Close]

BLAST of Carg03058 vs. ExPASy TrEMBL
Match: A0A1S4E5L0 (anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC103503584 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 1.1e-39
Identity = 138/308 (44.81%), Postives = 157/308 (50.97%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHHAFP---------------PPPPLFF------------- 60
           MDSGS SLQSSSG DE+YDSHH                  PP PLFF             
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  --------------------------NPNSYQTHLLPSSPFYDFP-SDYAFNNPSNAG-- 120
                                     N N++  HLLPS  FYDFP S+Y FN  S++   
Sbjct: 61  SSSLLACSSSSIPHHQQSLPNFHNYQNNNNHHHHLLPS--FYDFPSSNYNFNPDSSSNSF 120

Query: 121 -------TSEPAAAE-----PTQNQIPIR------SSGVLHPKATTKKRTRASRRAPTTV 180
                  + EP          TQNQIP        SSG LHPK TTKKRTRASRRAPTTV
Sbjct: 121 VNLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTV 180

Query: 181 LTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTS--STPSILETSGSGL- 208
           LTTDTTNFRAMVQEFTGIPSPPFT+GGSSYSRRFDLF LV+TTS  ST + LE SG G+ 
Sbjct: 181 LTTDTTNFRAMVQEFTGIPSPPFTSGGSSYSRRFDLFGLVRTTSNNSTATRLEDSGLGVG 240

[Close]

BLAST of Carg03058 vs. ExPASy TrEMBL
Match: A0A0A0LJY7 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 2.0e-38
Identity = 126/232 (54.31%), Postives = 137/232 (59.05%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHH-----AFPPPPPLFFN-PNS------------------ 60
           MDSGS SLQSSSG DE+YDSHH        PP PLFFN P+S                  
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHQQPQLVFPPSPLFFNLPSSSSSSSCSSSSLLASSSSS 60

Query: 61  --------------YQT--HLLPSSPFYDFP--SDYAFNNPSNAG---------TSEPAA 120
                         YQ   HLLPS  FYDFP  S+Y FN  S++          + EP  
Sbjct: 61  SIPHHQQSLPSFHNYQNNHHLLPS--FYDFPASSNYNFNPDSSSNSFVNLDVLRSGEPTH 120

Query: 121 AE-----PTQNQIPI------RSSGVLHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQ 167
            +      TQNQIP        SSG LHPK  TKKRTRASRRAPTTVLTTDTTNFRAMVQ
Sbjct: 121 FKTPPDGSTQNQIPTIRSTPSTSSGALHPKVNTKKRTRASRRAPTTVLTTDTTNFRAMVQ 180

[Close]

BLAST of Carg03058 vs. ExPASy TrEMBL
Match: A0A5D3E5M3 (Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G004870 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 5.8e-38
Identity = 124/245 (50.61%), Postives = 135/245 (55.10%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSHHAFP---------------PPPPLFF------------- 60
           MDSGS SLQSSSG DE+YDSHH                  PP PLFF             
Sbjct: 1   MDSGSGSLQSSSGGDEEYDSHHHHHHHHQQQQQQQPQLVFPPSPLFFNLPSSSSSSSSCS 60

Query: 61  --------------------------NPNSYQTHLLPSSPFYDFP-SDYAFNNPSNAG-- 120
                                     N N++  HLLPS  FYDFP S+Y FN  S++   
Sbjct: 61  SSSLLACSSSSIPHHQQSLPNFHNYQNNNNHHHHLLPS--FYDFPSSNYNFNPDSSSNSF 120

Query: 121 -------TSEPAAAE-----PTQNQIPIR------SSGVLHPKATTKKRTRASRRAPTTV 167
                  + EP          TQNQIP        SSG LHPK TTKKRTRASRRAPTTV
Sbjct: 121 VNLDVLRSGEPTHFRNPPDGSTQNQIPTNRSTPSTSSGALHPKVTTKKRTRASRRAPTTV 180

[Close]

BLAST of Carg03058 vs. ExPASy TrEMBL
Match: A0A6J1IVA8 (mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 3.0e-34
Identity = 127/303 (41.91%), Postives = 148/303 (48.84%), Query Frame = 0


Query: 1   MDSGSPSLQSSSGADEDYDSH----------------HAF-PPPPPLFFNPNSYQTHLLP 60
           MDSGS SLQSSSG D+DYDSH                H F PPPPPLFFN        LP
Sbjct: 1   MDSGSGSLQSSSGGDDDYDSHRRRHHHYHHQEQQQQPHLFPPPPPPLFFNATMPPHQPLP 60

Query: 61  -------SSPFYDFPSDYAFN----NPSNAGT---------------SEP---------- 120
                      YDFPS++       NP ++ +               SEP          
Sbjct: 61  FHLSHHNFQNLYDFPSNFNLQPTNFNPDSSNSFLNLDDDRPNPTSLRSEPTTTTTFKTPI 120

Query: 121 -AAAEPTQNQIPIRSSGV----LHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTG 180
            A       QIP RS+      LHPK TTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTG
Sbjct: 121 SAEGSTHHTQIPNRSTNPSPTGLHPKPTTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTG 180

Query: 181 IPSPPFTAGG------SSYSRRFDLFNLVKTTSSTPSILETSGSGLYSSR---------- 206
           IPSPPFTA G      SS+SRRFDLF  V+  ++T + LE SGSG + SR          
Sbjct: 181 IPSPPFTAPGSSSSSSSSFSRRFDLFASVRANTTTTTNLEPSGSGFHPSRSKVQLFSSLN 240

[Close]

BLAST of Carg03058 vs. TAIR 10
Match: AT5G65170.1 (VQ motif-containing protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.3e-15
Identity = 57/129 (44.19%), Postives = 71/129 (55.04%), Query Frame = 0


Query: 25  PPPPPLFFNPNSYQTHLLPSSPFYDFPSDYAFNNPSNAGTSEPAAAEPTQNQIPIRSSGV 84
           P PPP+    +S Q        F+  P         N  T+ P  + PT  +  + ++  
Sbjct: 90  PVPPPI----SSEQV-------FFTNPLQQNLRTVPNTNTTSPICSVPTDKKNGLATT-- 149

Query: 85  LHPKATTKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSR-RFDLFN 144
                  KKR+R SRRAPTTVLTTDT+NFRAMVQEFTG PS PFT   SS+ R RFDLF 
Sbjct: 150 ----RNPKKRSRVSRRAPTTVLTTDTSNFRAMVQEFTGNPSTPFTGLSSSFPRSRFDLFG 201

Query: 145 LVKTTSSTP 153
              ++SS P
Sbjct: 210 SSSSSSSRP 201

[Close]

BLAST of Carg03058 vs. TAIR 10
Match: AT1G35830.1 (VQ motif-containing protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.2e-15
Identity = 66/156 (42.31%), Postives = 86/156 (55.13%), Query Frame = 0


Query: 1   MDS-GSPSLQSSS--------GADEDYDSHH--AFPPPP---PLFFNPNSYQTHLLPSSP 60
           MDS  S SLQSSS        GA +D+ S     F PPP     + +P +  +    S+ 
Sbjct: 1   MDSCNSGSLQSSSDDHESSSTGAPQDHSSFFLPPFQPPPSSSTYYGDPTTLSSSSSSSAT 60

Query: 61  FYDFPSDYAFNNPSNAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKKRTRASRRAPTTVL 120
           + +F ++   ++  N     P    P     P  SS         +KRTRASRRAPTTVL
Sbjct: 61  YLNFVNNLISDDILNQTHLLPPQPPPPPPPPPPSSS------RNPRKRTRASRRAPTTVL 120

Query: 121 TTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLF 143
           TTDT+NFRAMVQEFTG+P+ PF+   SS +RRFD+F
Sbjct: 121 TTDTSNFRAMVQEFTGVPASPFSHPFSSTTRRFDIF 150

[Close]

BLAST of Carg03058 vs. TAIR 10
Match: AT4G39720.1 (VQ motif-containing protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.2e-12
Identity = 69/185 (37.30%), Postives = 93/185 (50.27%), Query Frame = 0


Query: 1   MDSG-SPSLQSSS----GADEDYDS------------HH-----AFPPPPP-----LFFN 60
           M+SG S S+QSSS    G +E+YDS            HH     + P P       L F+
Sbjct: 1   MESGNSSSMQSSSGGGGGGEEEYDSRAADQSISAFFDHHNNHVSSIPTPQQNHRNLLHFD 60

Query: 61  PNSYQTHLLPSSPFYDFPSDYAFNNPSNAGTSEPAAAEPTQNQIPIRSSGVLHPKATTKK 120
            N+    L+P + F +         P      +   +  T +  P  + GV+     TKK
Sbjct: 61  HNN-NNSLIPPNYFNNNTFLPVNQQPDPISQLDLRTSSATSSLPPTNNIGVI---KKTKK 120

Query: 121 RTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSSTPS 159
           R+RASRRAPTTVLTTDT+NFRAMVQEFTGIP+PP     +S      L   +  +SS+P+
Sbjct: 121 RSRASRRAPTTVLTTDTSNFRAMVQEFTGIPAPPL-FNNNSIVNTTRLNTFLGLSSSSPN 180

[Close]

BLAST of Carg03058 vs. TAIR 10
Match: AT4G15120.1 (VQ motif-containing protein )

HSP 1 Score: 56.2 bits (134), Expect = 3.6e-08
Identity = 38/75 (50.67%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 91  TKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSS 150
           T++R+RASRR PTT+  TDT NFRAMVQ+FTG PS    A GSS S  F L      TSS
Sbjct: 50  TRRRSRASRRTPTTLFNTDTANFRAMVQQFTGGPSA--VAFGSSPSSGFSL------TSS 109

Query: 151 TPSILETSGSGLYSS 166
            P+   +S    Y++
Sbjct: 110 DPTAGVSSSPWQYAN 116

[Close]

BLAST of Carg03058 vs. TAIR 10
Match: AT3G22160.1 (VQ motif-containing protein )

HSP 1 Score: 55.1 bits (131), Expect = 8.1e-08
Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 91  TKKRTRASRRAPTTVLTTDTTNFRAMVQEFTGIPSPPFTAGGSSYSRRFDLFNLVKTTSS 150
           T++R+RASRR PTT+L TDT+NFRAMVQ++TG PS      G++ S     F+L  T+SS
Sbjct: 54  TRRRSRASRRTPTTLLNTDTSNFRAMVQQYTGGPSAMAFGSGNTTS----AFSL--TSSS 110

Query: 151 TPS 154
            PS
Sbjct: 114 DPS 110

The following BLAST results are available for this feature:

BLAST of Carg03058 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024630.1	8.7e-113	100.00	hypothetical protein SDJN02_13448, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6591747.1	3.4e-109	98.56	hypothetical protein SDJN03_14093, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023536151.1	4.8e-103	92.96	uncharacterized protein LOC111797394 [Cucurbita pepo subsp. pepo]	[more]
XP_022975920.1	1.3e-97	91.83	uncharacterized protein LOC111476479 [Cucurbita maxima]	[more]
XP_038898813.1	9.5e-43	47.68	uncharacterized serine-rich protein C215.13-like [Benincasa hispida]	[more]

BLAST of Carg03058 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LIE6	1.1e-06	53.97	VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1	[more]

BLAST of Carg03058 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1II30	6.5e-98	91.83	uncharacterized protein LOC111476479 OS=Cucurbita maxima OX=3661 GN=LOC111476479...	[more]
A0A1S4E5L0	1.1e-39	44.81	anaphase-promoting complex subunit cdh1-like OS=Cucumis melo OX=3656 GN=LOC10350...	[more]
A0A0A0LJY7	2.0e-38	54.31	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G895870 PE=4 SV=...	[more]
A0A5D3E5M3	5.8e-38	50.61	Anaphase-promoting complex subunit cdh1-like OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A6J1IVA8	3.0e-34	41.91	mucin-5AC-like OS=Cucurbita maxima OX=3661 GN=LOC111480291 PE=4 SV=1	[more]

BLAST of Carg03058 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65170.1	2.3e-15	44.19	VQ motif-containing protein	[more]
AT1G35830.1	5.2e-15	42.31	VQ motif-containing protein	[more]
AT4G39720.1	3.2e-12	37.30	VQ motif-containing protein	[more]
AT4G15120.1	3.6e-08	50.67	VQ motif-containing protein	[more]
AT3G22160.1	8.1e-08	53.97	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 100..127 e-value: 7.1E-13 score: 47.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR33179:SF4	VQ MOTIF-CONTAINING PROTEIN	coord: 1..153
IPR039609	VQ motif-containing protein 15/22	PANTHER	PTHR33179	VQ MOTIF-CONTAINING PROTEIN	coord: 1..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03058-RA	Carg03058-RA	mRNA