Carg03037 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg03037
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like
Location	Carg_Chr09: 3138596 .. 3144056 (+)
RNA-Seq Expression	Carg03037
Synteny	Carg03037

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATTTCTGATCGACGAGGGAACTGCAAATACTCCTCGGTCCAAACACCAAGAAACAGTGGAGCATGGAGCGTCTCCGGCCGAGGGACAGACAGATGTTTTCCGGGTTTACGAAGGGCGAGGTAGGTATCTCATTCATGTCTCGTAGGATCTGAGCGCTTGTTTGATTATTTTGGTGTTGCTGGATTTACAATATCAAAGTATAATTTTGAAGTACGGTCTCTCATCGTCTGTGCTGCGCAGGGTATCTATATGCATTTTGTGAACTATTGATGTTTTTTAATGATCATGTCCGAAGTATGTTTTCATGTTTAGTGGTGCAATGGAAGCTACAACGTAGCTTGTTTTGATGCGTGAACTATTGCATAATTTGTAATGTTACCTCATAGTTGATGATAAGTGAATGGACTTCATTTTATGTTTTTCGACTACATGTTCTTTCTGTTTCAACATGTTTCATTAGCAAACAGGAAGGGTTTAGTGGTGGAGTTTTTGTTTTTCTTTAATTTCTGTTCTTTGGTTTATTGGCCTCATCGGTGTCCCGCCGTACATTGGTTCCCTAACTCCAACATTTGAAGTATTAACTTACCACTGTTCTGTACCAAAAGCTTGACGTTGGGGCATATTAAAGCTTTTATTTGTATTCTTCTACATTTGAAAGGCGAAAAGAGGGAGAATTACAAGTTAGGAGTCAAATATTTTGTCTACCTATACTGGAAAAGGATTACTATATCAATGTCATCTACCTTAGAAAGCAACTCTCCTTAAACTTATTTGAGTCACAAATTGTATTCAGAAACATGCCCTTGTACAAAACAACAAAGAGCAAGTGAATCTTCCTATTTTTTTTTTCGTCACAATGAAAAATAGTTTTTGCAAATGTAAAGTTGAGAAGGCAAGAAAAATAATTTTCCCGGTTTCTTTTGTTTTTTAGGACTCCTCCTGTGCGTGTATTTTGATTTCCACCAGCCCGGAAGCGCTCTTGTTAATACCCCTGACTCTTTGCCTTCTTTTTTTGGTGCACTCGGAACAATGTTTTCTGTGTGGTCTCATGCTTGTATGCTCTTATCATCCATCTAATTAAAATTTTTGCCTTTTATTAAATAAAAACAAGCCTTCTGAGAAGCAGAACTAATTACGTATAACTTGTTGCTTTTATTGTGTTTTCTTCAAATGAAAACAGAGGATATTCTGGACTCTTGATGTCATATTTATTTCTTTTCTTTCATTTGGTACCTTTACACTGAATCCATTATAAAATATACTTTTGCATCAATTTAGAATTTCCTTTTGGATTGAGAGCTTGTTGTACATACTTCTTATAACATTTTAGTTTTCCCATCCCACATGGCTTTAAACTTTGCAAACAGATAGCGAAAATGGAGAAATTAATAGAGGAATCAGGAGAACAATTGCTTGATCGAGATTTTTGTCAAAAAGTTACCAAACGTTTCAAGTGAGTATCATTTTTCTTGTTATCATAAAACTTTTAATTAATCTTTAAATATGTATATGACGTATGTATAATGTTGAGTTCTCTTGTTTGGCATTCCATGTCTATACAGTCGGTCCTCCGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTTATCATATTGTTTATGTTTTTTCTTATTCTGTTTTATTTTTTATTTTTTTATAAGTAATATTCTACTTCTATTGTTGTATATCTTGCGAATAGGACTTGATGAACCTTTTTTTATTGGCCTTTGGAAATCGTTGTGGAGATTCTTGGCAGAGAGAGAGATTCATGGTGGTACCAGCTTACATTGAGTGTTCACACATCTTGATTTTCAGGACGTCTCCCTTAATTTGATTAGTGGGCGTGTCCTCCAACCTTTGGAGAAGGATAAAAGGGCAAAGAGTATTCTTATTGAACATTTCTTAGATTTAAACTCTTGTAGCTACTCTATTCTTCAAACTAAATCCAATTAGGAAGTCCTTGGGTAGTTCCTTGACTTGAGCTTGGGTGATACCTCCTCCTTCCTTATTATATATTGGTTTTTGCTACATTGAAGTTCTACGTTTCCTAGTGGGTACTTTGGCAGGGTACTTTGGTAACTAGTGGGTATTTGGAAAGAGAAGAATAAAAAGTTTTTTGAAGCTTGATTTTTCAGTGGGGTTATGTTTGGAGTCTTGCATCACTGCAAATCTCCCATAATTACAACAGTAGAGTCTTATATGGGTGTCCTGAGATGTTTTTTTTTTTTTTTTTTTCCTTTTCCGTCTTCTCCGTATTTACTGTTCTTTATCTGATCTTTTGTATTTTCATGTTTGAGCAAAAAGGTTCTGGTGAAAAGTTTGTATCCATACAATGTTACAGGTATACGATTGGTTTGAAAGCAGACTGCAAGACTTCCCAAAAATTGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCCAATAAGACTCAGGAAAGTTCTCAAGGCCCCGAAGGTAATTTGAGTTAAGGTTTGCTTCCAATGTTTAAGGCAAAGTTACTCAGCTGTAGGATAGTTTATTGTTAAACGACAGTTCCTTTCTACTTCTTACTCTAACCGCAACCTTCATACCTCTTCATTTGGACATATGTTTACAATATTTTCATTTGGAACAATTTGAATGATGCTTTCAAGTGATCTAAAATTTGAATTTATTGAGAATATGTTAGCCTCCAATAGAAAATGTTTGTTCTTTTTCATTGATGAGATGAAATCTAAGCAATTCGGTGCAACAGAAAACGTTTTTTGTACAAAAGGAAAAAGGGAAAATGTCTCCCCTGAGGGCTAGTAAGTATTATATGGGTTCGACATATGTGAGATACAGGTAGGGGTAGGTTGTATTTTGGCAAGGTTTGTGCGTAGATAGTGGCTAGCCTCTTGAGTTGGTTAGACATTATATCATGTACGGTGTGCATTTGCACCCTCTTGAGCTCACTTTTAGTAATTAACAGTTTTGTCCTAACATTAATCTACATATTAAGAAATGTTTAATTTCACCCGCATATAGCTGCATTTCCATTAAATAAATGCACTAGTGCAATGCATGGAGCAGGGGCAAGTTGAGGCAATATTTTCATTTGGTATTTTGCTTGCCCTTGGACTTGAGATCTTTTGTCCTCTCTTCCACGGTCATTTTTAAGATACATTTTCTTGATTGGTTGTTTATTACTGTAGTTGTATTGGTTTGATTATTTAATTGCATGTTCCCAATTTTTTTTTTTTTTTTCCTTCCCTAGTTTTTCTATTGTGTAGTTGGACTATTTAACATAGAATATGGAGCTAACTACCATAGGTTGACCTGATGGTCATTGAGAGGCTAGTGTAAAAACACAAGGTATTTTGGGGTAATGGGTTCACACACACGGTGTTGAGGTGTTGAGGTGTTGTAACTCCTACATAGGATATTAAAATTGTATGAGTTTCTTTACAACTAAATATGGTAAGGTCAAATACTTGTCGTGTGAAATTAATTAGTGTGCGTAATGTGTAGTGGATATTTGCACTCCCTATTAACAAAAAAAAAAAAAAAACAAATGGAATTAGACTGTGTTTTTTATTGTATTTTATAATCTTTTTATTGAAATTAATTTGTGCAGATGGGACCTTTTTCTTTTGCTCCTCCACATGCTAATGACCTTTGTTTAAAAGCAGGCAAAAAGAAACCAGATTTGTCAGAGTTGGAATTTGAAGCAAGGTCTTCAAAAGATGGTGCATGGTATGTGAAGAAAACACTGCCATTAATTTTGACTAATAAAGTTGGTTCTGTTTGGTTGGGTGCATCTTTTGGGTGCCTGTCTATATATTTGCTCTGATGGTCTTTAATTGAGCTAAGAAACATATGCTTAAATTCAGTCTTTTACGGACTGCATATGGCTCGCTATGGATATCAGCAGATAGAAGAGTGAGCTATCTAGATAGACGGGCTAAGTTTAACGGTATCTTTGAGTTTCAAATCTGACAATTTCCTTCTTTTCTTGAGCATTTTTGGGGTTTTGATTCAAAATTAAGCTTTCTTTTGCCTAACTCCGTCTTGGCCATAGATTGAGTTGGAGCCTTGGAAATAAGGAATAGGAGTTTCAAGGGAAAATATATAGGATTGATTGGAAGTGTGGGATTGGCCTTGTATATTGTTTGTAGTCGGCTCCCTCTCTTTATGGAGCTTCTCTTGATGACGGGCTCTCTTAAACTCCTTGGCTTCCCCTTCCAGATCTGATGTCTGGTCCTCTGTAGTATTTCGTTCAGCGGCATCTTTGTTTCTGATCACAAACAATCTCTATAAATCGTAAACAAAAAACAAATGCACTATGAAGTAAGAATTGGGAAGTTATGACACACATTGAATTGCATGTCCATGTAGCAATTTAAAATCATACTATCAGTGTGATTACTTTGTAACTGCTATTGAAAAATCACTTTTGGTTTACTGCGATGTTAATTTGATTCATAAGCACGGTTGTTTTTTTAATAGCATATGCAGATTGACATGTTTCAGTATAATATCTCAAAATAGCATGCCTCTTATTCAGTCTTCTCCTCACGACAAGCAGGCTGCCTGTTGAATCTAATTAGGAAATTTCTTCTGGGCATCTGAATGTAAATTGTACTGGATTGAAGGTTGAATGTGGTGGCTAACTACATGAAGGAGATGATTTTACTATGAAAATCTTTTACGTTCAGGTTATTTAAGGGGAAAAAATAATACAGAAAAGAATGAGAACTCTACGTTGGTTTTAGATGAATCTTTATTTATGGTTTCTGCTTGTTTCTTAATACATTTCAATTTTTTCTGGGGTTCTGATGACATTCCACTAATATTTTGTAGGTATGATGTTGCTATGTTCCTTACACATAGATTTCTTAGTTCAGGCGAAGCTGTGAGTCTTGGAACCATCACATTTTTTTTCCGTCTTGTATTATGATTTATCATGCCTTCCATGATTTGTTGACCCAAGTGAGCTCATTGTTCACAAAAGGCGTCTAGATTTGAGGAACACGCTTAAGTTATACATGCATTTATGTATGTGATATGAGTATCTGAGTATAATTGCATGCTAGTTTTCAGTTGCGGATGGAATGTATAGTTGTCTGATTGGTTTGCCGATTCATTAAAGGAAGTGCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGTCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGCCAGAAGGTGAAGGCTGGGGACCTTGTACTCTGCTTCCAGGTGACTATGCAAAACATTCAATTGTTCATTTCTCAGTAGTCCACTTCATCTTAGAGTGTTACAACATTTTTAGGAGAGGAGGGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTCCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGATTCGTTACGATCATGATAGCACCGAGGCA

mRNA sequence

ATATTTCTGATCGACGAGGGAACTGCAAATACTCCTCGGTCCAAACACCAAGAAACAGTGGAGCATGGAGCGTCTCCGGCCGAGGGACAGACAGATGTTTTCCGGGTTTACGAAGGGCGAGATAGCGAAAATGGAGAAATTAATAGAGGAATCAGGAGAACAATTGCTTGATCGAGATTTTTGTCAAAAAGTTACCAAACGTTTCAATCGGTCCTCCGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACGATTGGTTTGAAAGCAGACTGCAAGACTTCCCAAAAATTGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCCAATAAGACTCAGGAAAGTTCTCAAGGCCCCGAAGGCAAAAAGAAACCAGATTTGTCAGAGTTGGAATTTGAAGCAAGGTCTTCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACACATAGATTTCTTAGTTCAGGCGAAGCTGAAGTGCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGTCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGCCAGAAGGTGAAGGCTGGGGACCTTGTACTCTGCTTCCAGGAGAGGAGGGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTCCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGATTCGTTACGATCATGATAGCACCGAGGCA

Coding sequence (CDS)

ATGGAGCGTCTCCGGCCGAGGGACAGACAGATGTTTTCCGGGTTTACGAAGGGCGAGATAGCGAAAATGGAGAAATTAATAGAGGAATCAGGAGAACAATTGCTTGATCGAGATTTTTGTCAAAAAGTTACCAAACGTTTCAATCGGTCCTCCGGTCGTGCTGGGAAGCCTGTAATAAAGTGGATGGAGGTATACGATTGGTTTGAAAGCAGACTGCAAGACTTCCCAAAAATTGAAAAGAGGATGTCTGAAATTCCCAAAGCTTGCCCTTCCAATAAGACTCAGGAAAGTTCTCAAGGCCCCGAAGGCAAAAAGAAACCAGATTTGTCAGAGTTGGAATTTGAAGCAAGGTCTTCAAAAGATGGTGCATGGTATGATGTTGCTATGTTCCTTACACATAGATTTCTTAGTTCAGGCGAAGCTGAAGTGCGTGTCAGATTTGTTGGATTTGGAGCTGAGGAAGATGAATGGGTCAACATAAAACAGTCAGTACGAGAACGCTCTGTCCCTCTAGAACATTCAGAGTGCCAGAAGGTGAAGGCTGGGGACCTTGTACTCTGCTTCCAGGAGAGGAGGGATCAGGCAATCTACTACGATGCCCATATTGTAGAAGTCCAGAGGAGAATGCATGATATTAGGGGCTGCAGGTGTCTTTTCTTGATTCGTTACGATCATGATAGCACCGAGGCA

Protein sequence

MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEA

Homology

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BLAST of Carg03037 vs. NCBI nr
Match: KAG7024610.1 (Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 471.1 bits (1211), Expect = 5.5e-129
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK
Sbjct: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEA 231
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEA
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTEA 230

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BLAST of Carg03037 vs. NCBI nr
Match: XP_022936584.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X4 [Cucurbita moschata] >KAG6591727.1 Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469.2 bits (1206), Expect = 2.1e-128
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK
Sbjct: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 229

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BLAST of Carg03037 vs. NCBI nr
Match: XP_022976049.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita maxima] >XP_023534844.1 protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468.0 bits (1203), Expect = 4.7e-128
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK
Sbjct: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 229

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BLAST of Carg03037 vs. NCBI nr
Match: XP_008466074.1 (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 446.4 bits (1147), Expect = 1.5e-121
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPR RQMFSGFTKGEI KMEKL+EESGEQ L+RDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRGRQMFSGFTKGEIEKMEKLLEESGEQSLNRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           W EVYDW +SRLQD PKIEKRMSEIPKACPSNKTQESSQGPEG+K PDLSELEFEARSSK
Sbjct: 61  WTEVYDWLQSRLQDLPKIEKRMSEIPKACPSNKTQESSQGPEGEKSPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDHDSTE
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTE 229

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BLAST of Carg03037 vs. NCBI nr
Match: XP_038898496.1 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 442.6 bits (1137), Expect = 2.1e-120
Identity = 213/229 (93.01%), Postives = 221/229 (96.51%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPR RQMFSGFTKGEI KMEKL+EESGEQ L+RDFCQ+VTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRGRQMFSGFTKGEIEKMEKLLEESGEQSLNRDFCQRVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           W EVYDW +SRLQDFPKIE R+SEIPKACPSNKTQESSQGPEG+K PDLSELEFEARSSK
Sbjct: 61  WTEVYDWLQSRLQDFPKIENRISEIPKACPSNKTQESSQGPEGEKSPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDHD TE
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDGTE 229

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BLAST of Carg03037 vs. ExPASy Swiss-Prot
Match: Q9XI47 (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE=1 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52
Identity = 110/234 (47.01%), Postives = 145/234 (61.97%), Query Frame = 0


Query: 12  FSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESR 71
           F+ FT  EI  ME L +E G+Q L +DFCQ V   F+ S  R GK  I W +V  WF+ +
Sbjct: 11  FTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK 70

Query: 72  L--QDFPKIEKRMS--------EIPKACPSNKTQESSQG------PEGKKKPDLSELEFE 131
           L  Q  PK +   S          P +  SN +  +  G          K  DL++L FE
Sbjct: 71  LKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFE 130

Query: 132 ARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSE 191
           A+S++D AWYDV+ FLT+R L +GE EVRVRF GF    DEWVN+K SVRERS+P+E SE
Sbjct: 131 AKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSE 190

Query: 192 CQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           C +V  GDL+LCFQER DQA+Y D H++ ++R +HD   C C+FL+RY+ D+TE
Sbjct: 191 CGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 244

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BLAST of Carg03037 vs. ExPASy Swiss-Prot
Match: Q8RWJ7 (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE=2 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.9e-47
Identity = 99/247 (40.08%), Postives = 145/247 (58.70%), Query Frame = 0


Query: 15  FTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESR--- 74
           F   E+ +ME ++ +    +  R   + +  +F+ S  R GK V+++ ++++WF++R   
Sbjct: 14  FILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYA 73

Query: 75  -------------LQDFPKIE--KRMSEIPKACPSNKTQE-------SSQGPEGKKKP-- 134
                        +   P+++   +M  + +     KT          +  P G   P  
Sbjct: 74  LRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGSLVPGV 133

Query: 135 -----DLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ 194
                D S LEFEA+S++DGAWYDV  FL HR L  G+ EV+VRF GF  EEDEW+N+K+
Sbjct: 134 MRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKK 193

Query: 195 SVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIR 230
            VR+RS+P E SEC  V AGDLVLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FL+R
Sbjct: 194 HVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVR 253

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BLAST of Carg03037 vs. ExPASy TrEMBL
Match: A0A6J1F8P9 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111443145 PE=4 SV=1)

HSP 1 Score: 469.2 bits (1206), Expect = 1.0e-128
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK
Sbjct: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 229

[Close]

BLAST of Carg03037 vs. ExPASy TrEMBL
Match: A0A6J1IMF0 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111476568 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.3e-128
Identity = 228/229 (99.56%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK
Sbjct: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 229

[Close]

BLAST of Carg03037 vs. ExPASy TrEMBL
Match: A0A1S3CQD7 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503608 PE=4 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 7.1e-122
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPR RQMFSGFTKGEI KMEKL+EESGEQ L+RDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRGRQMFSGFTKGEIEKMEKLLEESGEQSLNRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPEGKKKPDLSELEFEARSSK 120
           W EVYDW +SRLQD PKIEKRMSEIPKACPSNKTQESSQGPEG+K PDLSELEFEARSSK
Sbjct: 61  WTEVYDWLQSRLQDLPKIEKRMSEIPKACPSNKTQESSQGPEGEKSPDLSELEFEARSSK 120

Query: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVK 180
           DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VRERSVPLEHSECQKVK
Sbjct: 121 DGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRERSVPLEHSECQKVK 180

Query: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDHDSTE
Sbjct: 181 AGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHDSTE 229

[Close]

BLAST of Carg03037 vs. ExPASy TrEMBL
Match: A0A1S3CQD5 (protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503608 PE=4 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.6e-119
Identity = 216/243 (88.89%), Postives = 222/243 (91.36%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPR RQMFSGFTKGEI KMEKL+EESGEQ L+RDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRGRQMFSGFTKGEIEKMEKLLEESGEQSLNRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WMEVYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPE--------------GKKK 120
           W EVYDW +SRLQD PKIEKRMSEIPKACPSNKTQESSQGPE              G+K 
Sbjct: 61  WTEVYDWLQSRLQDLPKIEKRMSEIPKACPSNKTQESSQGPEVCMEQGQVEAILTSGEKS 120

Query: 121 PDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRE 180
           PDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VRE
Sbjct: 121 PDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVRE 180

Query: 181 RSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHD 230
           RSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDHD
Sbjct: 181 RSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDHD 240

[Close]

BLAST of Carg03037 vs. ExPASy TrEMBL
Match: A0A5A7TB77 (Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001550 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 3.6e-118
Identity = 217/245 (88.57%), Postives = 223/245 (91.02%), Query Frame = 0


Query: 1   MERLRPRDRQMFSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIK 60
           MERLRPR RQMFSGFTKGEI KMEKL+EESGEQ L+RDFCQKVTKRFNRSSGRAGKPVIK
Sbjct: 1   MERLRPRGRQMFSGFTKGEIEKMEKLLEESGEQSLNRDFCQKVTKRFNRSSGRAGKPVIK 60

Query: 61  WME-VYDWFESRLQDFPKIEKRMSEIPKACPSNKTQESSQGPE--------------GKK 120
           W E VYDW +SRLQD PKIEKRMSEIPKACPSNKTQESSQGPE              G+K
Sbjct: 61  WTEVVYDWLQSRLQDLPKIEKRMSEIPKACPSNKTQESSQGPEVCMEQGQVEAILTSGEK 120

Query: 121 KPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVR 180
            PDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ+VR
Sbjct: 121 SPDLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQAVR 180

Query: 181 ERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDH 231
           ERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFL+RYDH
Sbjct: 181 ERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLVRYDH 240

[Close]

BLAST of Carg03037 vs. TAIR 10
Match: AT1G15215.2 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 208.0 bits (528), Expect = 8.1e-54
Identity = 110/234 (47.01%), Postives = 145/234 (61.97%), Query Frame = 0


Query: 12  FSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESR 71
           F+ FT  EI  ME L +E G+Q L +DFCQ V   F+ S  R GK  I W +V  WF+ +
Sbjct: 11  FTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK 70

Query: 72  L--QDFPKIEKRMS--------EIPKACPSNKTQESSQG------PEGKKKPDLSELEFE 131
           L  Q  PK +   S          P +  SN +  +  G          K  DL++L FE
Sbjct: 71  LKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFE 130

Query: 132 ARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSE 191
           A+S++D AWYDV+ FLT+R L +GE EVRVRF GF    DEWVN+K SVRERS+P+E SE
Sbjct: 131 AKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSE 190

Query: 192 CQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           C +V  GDL+LCFQER DQA+Y D H++ ++R +HD   C C+FL+RY+ D+TE
Sbjct: 191 CGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Carg03037 vs. TAIR 10
Match: AT1G15215.3 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 208.0 bits (528), Expect = 8.1e-54
Identity = 110/234 (47.01%), Postives = 145/234 (61.97%), Query Frame = 0


Query: 12  FSGFTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESR 71
           F+ FT  EI  ME L +E G+Q L +DFCQ V   F+ S  R GK  I W +V  WF+ +
Sbjct: 11  FTEFTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEK 70

Query: 72  L--QDFPKIEKRMS--------EIPKACPSNKTQESSQG------PEGKKKPDLSELEFE 131
           L  Q  PK +   S          P +  SN +  +  G          K  DL++L FE
Sbjct: 71  LKHQSQPKSKTLPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFE 130

Query: 132 ARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSE 191
           A+S++D AWYDV+ FLT+R L +GE EVRVRF GF    DEWVN+K SVRERS+P+E SE
Sbjct: 131 AKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSE 190

Query: 192 CQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           C +V  GDL+LCFQER DQA+Y D H++ ++R +HD   C C+FL+RY+ D+TE
Sbjct: 191 CGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 244

[Close]

BLAST of Carg03037 vs. TAIR 10
Match: AT1G15215.1 (BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 198.7 bits (504), Expect = 4.9e-51
Identity = 105/223 (47.09%), Postives = 139/223 (62.33%), Query Frame = 0


Query: 23  MEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESRL--QDFPKIEK 82
           ME L +E G+Q L +DFCQ V   F+ S  R GK  I W +V  WF+ +L  Q  PK + 
Sbjct: 1   MENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKHQSQPKSKT 60

Query: 83  RMS--------EIPKACPSNKTQESSQG------PEGKKKPDLSELEFEARSSKDGAWYD 142
             S          P +  SN +  +  G          K  DL++L FEA+S++D AWYD
Sbjct: 61  LPSPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLAFEAKSARDYAWYD 120

Query: 143 VAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQSVRERSVPLEHSECQKVKAGDLVL 202
           V+ FLT+R L +GE EVRVRF GF    DEWVN+K SVRERS+P+E SEC +V  GDL+L
Sbjct: 121 VSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEPSECGRVNVGDLLL 180

Query: 203 CFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIRYDHDSTE 230
           CFQER DQA+Y D H++ ++R +HD   C C+FL+RY+ D+TE
Sbjct: 181 CFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTE 223

[Close]

BLAST of Carg03037 vs. TAIR 10
Match: AT3G18380.1 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 99/247 (40.08%), Postives = 145/247 (58.70%), Query Frame = 0


Query: 15  FTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESR--- 74
           F   E+ +ME ++ +    +  R   + +  +F+ S  R GK V+++ ++++WF++R   
Sbjct: 14  FILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYA 73

Query: 75  -------------LQDFPKIE--KRMSEIPKACPSNKTQE-------SSQGPEGKKKP-- 134
                        +   P+++   +M  + +     KT          +  P G   P  
Sbjct: 74  LRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGSLVPGV 133

Query: 135 -----DLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ 194
                D S LEFEA+S++DGAWYDV  FL HR L  G+ EV+VRF GF  EEDEW+N+K+
Sbjct: 134 MRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKK 193

Query: 195 SVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIR 230
            VR+RS+P E SEC  V AGDLVLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FL+R
Sbjct: 194 HVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVR 253

[Close]

BLAST of Carg03037 vs. TAIR 10
Match: AT3G18380.2 (sequence-specific DNA binding transcription factors;sequence-specific DNA binding )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 99/247 (40.08%), Postives = 145/247 (58.70%), Query Frame = 0


Query: 15  FTKGEIAKMEKLIEESGEQLLDRDFCQKVTKRFNRSSGRAGKPVIKWMEVYDWFESR--- 74
           F   E+ +ME ++ +    +  R   + +  +F+ S  R GK V+++ ++++WF++R   
Sbjct: 14  FILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQFKQIWNWFQNRRYA 73

Query: 75  -------------LQDFPKIE--KRMSEIPKACPSNKTQE-------SSQGPEGKKKP-- 134
                        +   P+++   +M  + +     KT          +  P G   P  
Sbjct: 74  LRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPGMTPAPSGSLVPGV 133

Query: 135 -----DLSELEFEARSSKDGAWYDVAMFLTHRFLSSGEAEVRVRFVGFGAEEDEWVNIKQ 194
                D S LEFEA+S++DGAWYDV  FL HR L  G+ EV+VRF GF  EEDEW+N+K+
Sbjct: 134 MRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAGFEVEEDEWINVKK 193

Query: 195 SVRERSVPLEHSECQKVKAGDLVLCFQERRDQAIYYDAHIVEVQRRMHDIRGCRCLFLIR 230
            VR+RS+P E SEC  V AGDLVLCFQE +DQA+Y+DA +++ QRR HD+RGCRC FL+R
Sbjct: 194 HVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRRHDVRGCRCRFLVR 253

The following BLAST results are available for this feature:

BLAST of Carg03037 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024610.1	5.5e-129	100.00	Protein SAWADEE HOMEODOMAIN-like 1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022936584.1	2.1e-128	100.00	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X4 [Cucurbita moschata] >KAG6...	[more]
XP_022976049.1	4.7e-128	99.56	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like [Cucurbita maxima] >XP_023534844.1 pr...	[more]
XP_008466074.1	1.5e-121	94.32	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 [Cucumis melo]	[more]
XP_038898496.1	2.1e-120	93.01	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 [Benincasa hispida]	[more]

BLAST of Carg03037 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI47	1.1e-52	47.01	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana OX=3702 GN=SHH1 PE...	[more]
Q8RWJ7	1.9e-47	40.08	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana OX=3702 GN=SHH2 PE...	[more]

BLAST of Carg03037 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F8P9	1.0e-128	100.00	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X4 OS=Cucurbita moschata OX=3...	[more]
A0A6J1IMF0	2.3e-128	99.56	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A1S3CQD7	7.1e-122	94.32	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3CQD5	5.6e-119	88.89	protein SAWADEE HOMEODOMAIN HOMOLOG 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7TB77	3.6e-118	88.57	Protein SAWADEE HOMEODOMAIN-like protein 1-like isoform X1 OS=Cucumis melo var. ...	[more]

BLAST of Carg03037 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15215.2	8.1e-54	47.01	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.3	8.1e-54	47.01	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT1G15215.1	4.9e-51	47.09	BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transc...	[more]
AT3G18380.1	1.3e-48	40.08	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]
AT3G18380.2	1.3e-48	40.08	sequence-specific DNA binding transcription factors;sequence-specific DNA bindin...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.50.40		coord: 109..170 e-value: 5.2E-33 score: 115.0
None	No IPR available	GENE3D	2.30.30.140		coord: 171..230 e-value: 3.7E-30 score: 105.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..111
None	No IPR available	PANTHER	PTHR33827:SF3	OS09G0346900 PROTEIN	coord: 8..229
IPR032001	SAWADEE domain	PFAM	PF16719	SAWADEE	coord: 111..227 e-value: 4.6E-43 score: 146.6
IPR039276	Protein SAWADEE HOMEODOMAIN HOMOLOG 1/2	PANTHER	PTHR33827	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 8..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg03037-RA	Carg03037-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding