Carg03001 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg03001
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein
LocationCarg_Chr09: 2907127 .. 2908614 (+)
RNA-Seq ExpressionCarg03001
SyntenyCarg03001
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTGTTTGGATTTCAAAAGCAATAATCTCCAAGAGGAATAGTCCTGCCAGACTCTTTACTACCTCCATAGAAGCTCAGAAGAAATCCAAATCCAGTTACATTTCTCACGAAACAGCCATAAGGTTGATAGAAAATGAAAGAGATCCTCAACATGCGCTTGAAATATTCAACATGGTGTCGGAGCAAAAAGGCTTTAATCACAATAACGCCACTTATGGAAGCATTCTTCAAAGGCTTGCAAAATCTAAGAAATTCCAGGCTATTGATGGAGTTCTGCATCAAATGACATATGACACCTGCAAATTACACGAGGGTATATTCCTTAATCTCATGAAGCATTATTCAAAGTCTTCTATGCACGAAAGAGTGCTTGACATGTTTTATGCTATCCAGTCGATTGTTCGTCAAAAGCCCTCTCTTAAAGCGATCAGCACGTGTCTCAATCTTCTAGTCGAAAACGACCGGGTTGATCTAGCCAGGAAATTGCTTGTAAATGCTAGTAGCAAGCTCAACTTAATACCAAATACTTGCATTTTCAACATTTTAGTTAAGCATCATTGCAGAAATGGAAATCTTCAAGCTGCATTTGAGGTTGTAAGGGAAATGAAAAGTGCTAGAGTCTCTTATCCTAATCTCATCACCTATTCAACTCTGATAGGTGGTCTTTGTCAAAGTGGAAAACTTAAAGAAGCCATTGAACTTTTTGAGAACATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTGACTTACAATATTCTGATCAATGGCTTTTGTCAAGGAGGGAAGGTTGACCGTGCAAGGAAAATAGTCGAGTTCATGAAAAGCAATGGATGCAGTCCTAACGTATTCAATTACTCAGTCTTAATGAATGGCCTCTGTAAAGAAGGGAAATTGCAAGAGGCAAAGGAAGTTTTTGATGAAATGAAGAGCCTCGGGATGAAGCCCGATACGGTCAGCTACACTACCTTAATGAACTGCCTATGTAGAACCGGAAGGGTCGACGAGGCTACAGAGTTACTCCAGAAAATGAAGGACCAAGATTGCAGAGCCGATTCCATAACATTGAATGTGATCCTTGGAGGTCTATGCCGAGAAGGAAGGTTCGAAGAGGCTCTCGATATGGTGCAGAAACTTCCCTTTGAGGGTTACTATTTGAACAAAGGAAGTTACAGAATTGTGTTGAATTTCCTGTCTCAGAAAGGAGAATTGAAAAGGGCTACTGAGTTATTGGGTCTAATGTTAAATAGGGGATTTGTACCTCACTATGCAACTTCTAATAGTCTGTTGGTTCTTCTGTGTAACAGTGGAATGGTGAAGGACGCAGTAGAATCTTTGCTTGGGTTGTTGGAGATGGGCTTCAAACCTGAGCCTGATTCTTGGTTTTCTTTGGTTGATTTGATCTGCAGGGAGAAGAAACTGCTGCCTGTGTTTGAATTGCTTGATGAGTTGATCTCTGAAGAACATTTAAATGTAAGTTAG

mRNA sequence

ATGAATATTGTTTGGATTTCAAAAGCAATAATCTCCAAGAGGAATAGTCCTGCCAGACTCTTTACTACCTCCATAGAAGCTCAGAAGAAATCCAAATCCAGTTACATTTCTCACGAAACAGCCATAAGGTTGATAGAAAATGAAAGAGATCCTCAACATGCGCTTGAAATATTCAACATGGTGTCGGAGCAAAAAGGCTTTAATCACAATAACGCCACTTATGGAAGCATTCTTCAAAGGCTTGCAAAATCTAAGAAATTCCAGGCTATTGATGGAGTTCTGCATCAAATGACATATGACACCTGCAAATTACACGAGGGTATATTCCTTAATCTCATGAAGCATTATTCAAAGTCTTCTATGCACGAAAGAGTGCTTGACATGTTTTATGCTATCCAGTCGATTGTTCGTCAAAAGCCCTCTCTTAAAGCGATCAGCACGTGTCTCAATCTTCTAGTCGAAAACGACCGGGTTGATCTAGCCAGGAAATTGCTTGTAAATGCTAGTAGCAAGCTCAACTTAATACCAAATACTTGCATTTTCAACATTTTAGTTAAGCATCATTGCAGAAATGGAAATCTTCAAGCTGCATTTGAGGTTGTAAGGGAAATGAAAAGTGCTAGAGTCTCTTATCCTAATCTCATCACCTATTCAACTCTGATAGGTGGTCTTTGTCAAAGTGGAAAACTTAAAGAAGCCATTGAACTTTTTGAGAACATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTGACTTACAATATTCTGATCAATGGCTTTTGTCAAGGAGGGAAGGTTGACCGTGCAAGGAAAATAGTCGAGTTCATGAAAAGCAATGGATGCAGTCCTAACGTATTCAATTACTCAGTCTTAATGAATGGCCTCTGTAAAGAAGGGAAATTGCAAGAGGCAAAGGAAGTTTTTGATGAAATGAAGAGCCTCGGGATGAAGCCCGATACGGTCAGCTACACTACCTTAATGAACTGCCTATGTAGAACCGGAAGGGTCGACGAGGCTACAGAGTTACTCCAGAAAATGAAGGACCAAGATTGCAGAGCCGATTCCATAACATTGAATGTGATCCTTGGAGGTCTATGCCGAGAAGGAAGGTTCGAAGAGGCTCTCGATATGGTGCAGAAACTTCCCTTTGAGGGTTACTATTTGAACAAAGGAAGTTACAGAATTGTGTTGAATTTCCTGTCTCAGAAAGGAGAATTGAAAAGGGCTACTGAGTTATTGGGTCTAATGTTAAATAGGGGATTTGTACCTCACTATGCAACTTCTAATAGTCTGTTGGTTCTTCTGTGTAACAGTGGAATGGTGAAGGACGCAGTAGAATCTTTGCTTGGGTTGTTGGAGATGGGCTTCAAACCTGAGCCTGATTCTTGGTTTTCTTTGGTTGATTTGATCTGCAGGGAGAAGAAACTGCTGCCTGTGTTTGAATTGCTTGATGAGTTGATCTCTGAAGAACATTTAAATGTAAGTTAG

Coding sequence (CDS)

ATGAATATTGTTTGGATTTCAAAAGCAATAATCTCCAAGAGGAATAGTCCTGCCAGACTCTTTACTACCTCCATAGAAGCTCAGAAGAAATCCAAATCCAGTTACATTTCTCACGAAACAGCCATAAGGTTGATAGAAAATGAAAGAGATCCTCAACATGCGCTTGAAATATTCAACATGGTGTCGGAGCAAAAAGGCTTTAATCACAATAACGCCACTTATGGAAGCATTCTTCAAAGGCTTGCAAAATCTAAGAAATTCCAGGCTATTGATGGAGTTCTGCATCAAATGACATATGACACCTGCAAATTACACGAGGGTATATTCCTTAATCTCATGAAGCATTATTCAAAGTCTTCTATGCACGAAAGAGTGCTTGACATGTTTTATGCTATCCAGTCGATTGTTCGTCAAAAGCCCTCTCTTAAAGCGATCAGCACGTGTCTCAATCTTCTAGTCGAAAACGACCGGGTTGATCTAGCCAGGAAATTGCTTGTAAATGCTAGTAGCAAGCTCAACTTAATACCAAATACTTGCATTTTCAACATTTTAGTTAAGCATCATTGCAGAAATGGAAATCTTCAAGCTGCATTTGAGGTTGTAAGGGAAATGAAAAGTGCTAGAGTCTCTTATCCTAATCTCATCACCTATTCAACTCTGATAGGTGGTCTTTGTCAAAGTGGAAAACTTAAAGAAGCCATTGAACTTTTTGAGAACATGGTTTCAAAGGACAAGATTTTGCCTGATGCCTTGACTTACAATATTCTGATCAATGGCTTTTGTCAAGGAGGGAAGGTTGACCGTGCAAGGAAAATAGTCGAGTTCATGAAAAGCAATGGATGCAGTCCTAACGTATTCAATTACTCAGTCTTAATGAATGGCCTCTGTAAAGAAGGGAAATTGCAAGAGGCAAAGGAAGTTTTTGATGAAATGAAGAGCCTCGGGATGAAGCCCGATACGGTCAGCTACACTACCTTAATGAACTGCCTATGTAGAACCGGAAGGGTCGACGAGGCTACAGAGTTACTCCAGAAAATGAAGGACCAAGATTGCAGAGCCGATTCCATAACATTGAATGTGATCCTTGGAGGTCTATGCCGAGAAGGAAGGTTCGAAGAGGCTCTCGATATGGTGCAGAAACTTCCCTTTGAGGGTTACTATTTGAACAAAGGAAGTTACAGAATTGTGTTGAATTTCCTGTCTCAGAAAGGAGAATTGAAAAGGGCTACTGAGTTATTGGGTCTAATGTTAAATAGGGGATTTGTACCTCACTATGCAACTTCTAATAGTCTGTTGGTTCTTCTGTGTAACAGTGGAATGGTGAAGGACGCAGTAGAATCTTTGCTTGGGTTGTTGGAGATGGGCTTCAAACCTGAGCCTGATTCTTGGTTTTCTTTGGTTGATTTGATCTGCAGGGAGAAGAAACTGCTGCCTGTGTTTGAATTGCTTGATGAGTTGATCTCTGAAGAACATTTAAATGTAAGTTAG

Protein sequence

MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNMVSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSSMHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCIFNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVFELLDELISEEHLNVS
Homology
BLAST of Carg03001 vs. NCBI nr
Match: KAG7024574.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 980.7 bits (2534), Expect = 4.6e-282
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM
Sbjct: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS
Sbjct: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV
Sbjct: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLNVS 496
           ELLDELISEEHLNVS
Sbjct: 481 ELLDELISEEHLNVS 495

BLAST of Carg03001 vs. NCBI nr
Match: KAG6591691.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 976.5 bits (2523), Expect = 8.7e-281
Identity = 492/495 (99.39%), Postives = 494/495 (99.80%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLI+NERDPQHALEIFNM
Sbjct: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIKNERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS
Sbjct: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATEL QKMKDQDCRAD+ITLNV
Sbjct: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELFQKMKDQDCRADTITLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLNVS 496
           ELLDELISEEHLNVS
Sbjct: 481 ELLDELISEEHLNVS 495

BLAST of Carg03001 vs. NCBI nr
Match: XP_022937178.1 (pentatricopeptide repeat-containing protein At5g18475 isoform X2 [Cucurbita moschata])

HSP 1 Score: 968.8 bits (2503), Expect = 1.8e-278
Identity = 487/494 (98.58%), Postives = 492/494 (99.60%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLI+NERDPQHALEIFNM
Sbjct: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIKNERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VSEQKGFNHNNATYG ILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS
Sbjct: 61  VSEQKGFNHNNATYGGILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG CKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGFCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVF+EMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD+ITLNV
Sbjct: 301 LQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADTITLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLNV 495
           ELLDELI+EEHLN+
Sbjct: 481 ELLDELIAEEHLNM 494

BLAST of Carg03001 vs. NCBI nr
Match: XP_022937177.1 (pentatricopeptide repeat-containing protein At5g18475 isoform X1 [Cucurbita moschata])

HSP 1 Score: 968.8 bits (2503), Expect = 1.8e-278
Identity = 487/493 (98.78%), Postives = 491/493 (99.59%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLI+NERDPQHALEIFNM
Sbjct: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIKNERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VSEQKGFNHNNATYG ILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS
Sbjct: 61  VSEQKGFNHNNATYGGILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG CKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGFCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVF+EMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD+ITLNV
Sbjct: 301 LQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADTITLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLN 494
           ELLDELI+EEHLN
Sbjct: 481 ELLDELIAEEHLN 493

BLAST of Carg03001 vs. NCBI nr
Match: XP_023536311.1 (pentatricopeptide repeat-containing protein At5g18475 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 964.1 bits (2491), Expect = 4.5e-277
Identity = 484/494 (97.98%), Postives = 489/494 (98.99%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIVWISKAIISKRNSP RLFTTSIEAQKKSKSSYISHETAIRLI+NERDPQHALEIFNM
Sbjct: 1   MNIVWISKAIISKRNSPTRLFTTSIEAQKKSKSSYISHETAIRLIKNERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VSEQKGFNHNNATYG ILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS
Sbjct: 61  VSEQKGFNHNNATYGGILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG CKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGFCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEA ELLQ+MKDQDCRAD +TLNV
Sbjct: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEANELLQQMKDQDCRADVVTLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSNSLLVLLCNSGMVKDAVESL+GLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLVGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLNV 495
           ELLDELI+EEHLNV
Sbjct: 481 ELLDELIAEEHLNV 494

BLAST of Carg03001 vs. ExPASy Swiss-Prot
Match: Q3E9F0 (Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX=3702 GN=At5g18475 PE=2 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 1.7e-157
Identity = 272/486 (55.97%), Postives = 357/486 (73.46%), Query Frame = 0

Query: 5   WISKAIIS-KRNSPARLFTTSIE-AQKKSKSSYISHETAIRLIENERDPQHALEIFNMVS 64
           W+S    S K+  P+    +SI   +   K+ +ISHE+A+ L++ ERDPQ  L+IFN  S
Sbjct: 21  WVSPICFSEKKKKPSPPPESSISPVETNPKTKFISHESAVSLMKRERDPQGVLDIFNKAS 80

Query: 65  EQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSSMH 124
           +QKGFNHNNATY  +L  L + KKF A+D +LHQM Y+TC+  E +FLNLM+H+S+S +H
Sbjct: 81  QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140

Query: 125 ERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCIFN 184
           ++V++MF  IQ I R KPSL AISTCLNLL+++  V+L+RKLL+ A   L L PNTCIFN
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200

Query: 185 ILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENMVS 244
           ILVKHHC+NG++  AF VV EMK + +SYPN ITYSTL+  L    + KEA+ELFE+M+S
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260

Query: 245 KDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGKLQ 304
           K+ I PD +T+N++INGFC+ G+V+RA+KI++FMK NGC+PNV+NYS LMNG CK GK+Q
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320

Query: 305 EAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNVIL 364
           EAK+ FDE+K  G+K DTV YTTLMNC CR G  DEA +LL +MK   CRAD++T NVIL
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380

Query: 365 GGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRGFV 424
            GL  EGR EEAL M+ +   EG +LNKGSYRI+LN L   GEL++A + L +M  RG  
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440

Query: 425 PHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVFEL 484
           PH+AT N L+V LC SG  +  V  L+G L +G  P P SW ++V+ IC+E+KL+ VFEL
Sbjct: 441 PHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFEL 500

Query: 485 LDELIS 489
           LD L+S
Sbjct: 501 LDSLVS 506

BLAST of Carg03001 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 1.8e-58
Identity = 143/444 (32.21%), Postives = 236/444 (53.15%), Query Frame = 0

Query: 33  SSYISHETAIRLIENERDPQHALEIFNMVSEQ--KGFNHNNATYGSILQRLAKSKKFQAI 92
           S  I+    I+L+  E+D + ++ +F+  + +   G+ H+ +++G ++ RL  + KF+A 
Sbjct: 11  SKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAA 70

Query: 93  DGVLHQMTYDTCKLHEGIFLNLMKHYSKSSMHERVLDMFYAIQSIVRQKPSLKAISTCLN 152
           + ++ +M  + C + E I L++ + Y +       L +F+ ++      PS KA  T L 
Sbjct: 71  EDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF-DCDPSQKAYVTVLA 130

Query: 153 LLVENDRVDLARKLLVNASSKLNLIPNTCIFNILVKHHCRN-GNLQAAFEVVREMKSARV 212
           +LVE ++++LA K   N   ++ L P     N+L+K  CRN G + A  ++  EM   R 
Sbjct: 131 ILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK-RG 190

Query: 213 SYPNLITYSTLIGGLCQSGKLKEAIELFENMVSKDKILPDALTYNILINGFCQGGKVDRA 272
             P+  TY TLI GLC+ G++ EA +LF  MV KD   P  +TY  LING C    VD A
Sbjct: 191 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDEA 250

Query: 273 RKIVEFMKSNGCSPNVFNYSVLMNGLCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNC 332
            + +E MKS G  PNVF YS LM+GLCK+G+  +A E+F+ M + G +P+ V+YTTL+  
Sbjct: 251 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 310

Query: 333 LCRTGRVDEATELLQKMKDQDCRADSITLNVILGGLCREGRFEEALDMVQKLPFEGYYLN 392
           LC+  ++ EA ELL +M  Q  + D+     ++ G C   +F EA + + ++   G   N
Sbjct: 311 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 370

Query: 393 KGSYRIVLNFLSQ------KGELKRATELLGLMLNRGFVPHYATSNSLLVLLCNSGMVKD 452
           + ++ I +   ++           RA  L   M +RG      T  SL+  LC  G  + 
Sbjct: 371 RLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQK 430

Query: 453 AVESLLGLLEMGFKPEPDSWFSLV 468
           AV+ +  ++  G  P   +W  L+
Sbjct: 431 AVQLVDEIVTDGCIPSKGTWKLLI 450

BLAST of Carg03001 vs. ExPASy Swiss-Prot
Match: Q9FFE3 (Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16420 PE=2 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.3e-58
Identity = 132/430 (30.70%), Postives = 235/430 (54.65%), Query Frame = 0

Query: 42  IRLIENERDPQHALEIFNMVSE-QKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQM--T 101
           + +I  +++   AL+IF    +   GF HN  TY SIL +L++++ F  ++ ++  +  +
Sbjct: 53  VSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS 112

Query: 102 YDTCKLHEGIFLNLMKHYSKSSMHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRV 161
           Y   K  E +F++L+++Y  +  +E  + +F  I      K S+++++T LN+L++N R 
Sbjct: 113 YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF-GVKRSVRSLNTLLNVLIQNQRF 172

Query: 162 DLARKLLVNASSKLNLIPNTCIFNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYS 221
           DL   +  N+     + PN    N+LVK  C+  ++++A++V+ E+ S  +  PNL+TY+
Sbjct: 173 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL-VPNLVTYT 232

Query: 222 TLIGGLCQSGKLKEAIELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKS 281
           T++GG    G ++ A  + E M+ +    PDA TY +L++G+C+ G+   A  +++ M+ 
Sbjct: 233 TILGGYVARGDMESAKRVLEEMLDRG-WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 292

Query: 282 NGCSPNVFNYSVLMNGLCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDE 341
           N   PN   Y V++  LCKE K  EA+ +FDEM      PD+     +++ LC   +VDE
Sbjct: 293 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 352

Query: 342 ATELLQKMKDQDCRADSITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLN 401
           A  L +KM   +C  D+  L+ ++  LC+EGR  EA  +  +   +G   +  +Y  ++ 
Sbjct: 353 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIA 412

Query: 402 FLSQKGELKRATELLGLMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKP 461
            + +KGEL  A  L   M  R   P+  T N L+  L  +G VK+ V  L  +LE+G  P
Sbjct: 413 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 472

Query: 462 EPDSWFSLVD 469
              ++  L +
Sbjct: 473 NKTTFLILFE 478

BLAST of Carg03001 vs. ExPASy Swiss-Prot
Match: Q9LQQ1 (Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g07740 PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 8.2e-56
Identity = 125/404 (30.94%), Postives = 231/404 (57.18%), Query Frame = 0

Query: 50  DPQHALEIFNMVSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIF 109
           DP+ AL +F+   E  GF H+  +Y S++ +LAKS+ F A+D +L  + Y   +  E +F
Sbjct: 61  DPEEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 120

Query: 110 LNLMKHYSKSSMHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNAS 169
           + L++HY K+   ++ +D+F+ I S    + ++++++T +N+LV+N  ++ A K   + +
Sbjct: 121 MGLIQHYGKAGSVDKAIDVFHKITSFDCVR-TIQSLNTLINVLVDNGELEKA-KSFFDGA 180

Query: 170 SKLNLIPNTCIFNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGK 229
             + L PN+  FNIL+K      + +AA +V  EM    V  P+++TY++LIG LC++  
Sbjct: 181 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQ-PSVVTYNSLIGFLCRNDD 240

Query: 230 LKEAIELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYS 289
           + +A  L E+M+ K +I P+A+T+ +L+ G C  G+ + A+K++  M+  GC P + NY 
Sbjct: 241 MGKAKSLLEDMIKK-RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 300

Query: 290 VLMNGLCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQ 349
           +LM+ L K G++ EAK +  EMK   +KPD V Y  L+N LC   RV EA  +L +M+ +
Sbjct: 301 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 360

Query: 350 DCRADSITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRA 409
            C+ ++ T  +++ G CR   F+  L+++  +    +     ++  ++  L + G L  A
Sbjct: 361 GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 420

Query: 410 TELLGLMLNRGFVPHYATSNSLLVLLC--NSGMVKDAVESLLGL 452
             +L +M  +          +LL  LC  + G+  +A+  ++ +
Sbjct: 421 CFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVISI 459

BLAST of Carg03001 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.0e-54
Identity = 106/316 (33.54%), Postives = 188/316 (59.49%), Query Frame = 0

Query: 175 IPNTCIFNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAI 234
           +P+   +N+++  +C+ G +  A  V+  M  +    P+++TY+T++  LC SGKLK+A+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAM 228

Query: 235 ELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG 294
           E+ + M+ +D   PD +TY ILI   C+   V  A K+++ M+  GC+P+V  Y+VL+NG
Sbjct: 229 EVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 288

Query: 295 LCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD 354
           +CKEG+L EA +  ++M S G +P+ +++  ++  +C TGR  +A +LL  M  +     
Sbjct: 289 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 348

Query: 355 SITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLG 414
            +T N+++  LCR+G    A+D+++K+P  G   N  SY  +L+   ++ ++ RA E L 
Sbjct: 349 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 408

Query: 415 LMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREK 474
            M++RG  P   T N++L  LC  G V+DAVE L  L   G  P   ++ +++D + +  
Sbjct: 409 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 468

Query: 475 KLLPVFELLDELISEE 491
           K     +LLDE+ +++
Sbjct: 469 KTGKAIKLLDEMRAKD 479

BLAST of Carg03001 vs. ExPASy TrEMBL
Match: A0A6J1FAE2 (pentatricopeptide repeat-containing protein At5g18475 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443553 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 8.8e-279
Identity = 487/493 (98.78%), Postives = 491/493 (99.59%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLI+NERDPQHALEIFNM
Sbjct: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIKNERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VSEQKGFNHNNATYG ILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS
Sbjct: 61  VSEQKGFNHNNATYGGILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG CKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGFCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVF+EMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD+ITLNV
Sbjct: 301 LQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADTITLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLN 494
           ELLDELI+EEHLN
Sbjct: 481 ELLDELIAEEHLN 493

BLAST of Carg03001 vs. ExPASy TrEMBL
Match: A0A6J1FFA8 (pentatricopeptide repeat-containing protein At5g18475 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443553 PE=4 SV=1)

HSP 1 Score: 968.8 bits (2503), Expect = 8.8e-279
Identity = 487/494 (98.58%), Postives = 492/494 (99.60%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLI+NERDPQHALEIFNM
Sbjct: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIKNERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VSEQKGFNHNNATYG ILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS
Sbjct: 61  VSEQKGFNHNNATYGGILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG CKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGFCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVF+EMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD+ITLNV
Sbjct: 301 LQEAKEVFNEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADTITLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLNV 495
           ELLDELI+EEHLN+
Sbjct: 481 ELLDELIAEEHLNM 494

BLAST of Carg03001 vs. ExPASy TrEMBL
Match: A0A6J1IJ31 (pentatricopeptide repeat-containing protein At5g18475 OS=Cucurbita maxima OX=3661 GN=LOC111476740 PE=4 SV=1)

HSP 1 Score: 948.3 bits (2450), Expect = 1.2e-272
Identity = 476/495 (96.16%), Postives = 488/495 (98.59%), Query Frame = 0

Query: 1   MNIVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNM 60
           MNIV ISKAIISK NSP RLFTTSIEAQKKSKSSYISHETAIRLI++ERDPQHALEIFNM
Sbjct: 1   MNIVRISKAIISKSNSPTRLFTTSIEAQKKSKSSYISHETAIRLIKHERDPQHALEIFNM 60

Query: 61  VSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSS 120
           VS+QKGFNHNNATYG ILQRLAKSKKFQAIDGVLHQMTYDTC+LHEGIFLNLMKHYSKSS
Sbjct: 61  VSDQKGFNHNNATYGGILQRLAKSKKFQAIDGVLHQMTYDTCQLHEGIFLNLMKHYSKSS 120

Query: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180
           MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI
Sbjct: 121 MHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCI 180

Query: 181 FNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240
           FNILVK+HCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM
Sbjct: 181 FNILVKYHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENM 240

Query: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGK 300
           VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG CKEGK
Sbjct: 241 VSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGFCKEGK 300

Query: 301 LQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNV 360
           LQEAKEVFDEMKSLGMKPDTV +TTLMNCLCRTGRVDEATELLQ+MKDQDCRADS+TLNV
Sbjct: 301 LQEAKEVFDEMKSLGMKPDTVCHTTLMNCLCRTGRVDEATELLQQMKDQDCRADSVTLNV 360

Query: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRG 420
           ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQ GELKRAT+LLGLMLNRG
Sbjct: 361 ILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQNGELKRATDLLGLMLNRG 420

Query: 421 FVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480
           FVPHYATSN+LLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF
Sbjct: 421 FVPHYATSNNLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVF 480

Query: 481 ELLDELISEEHLNVS 496
           ELLDEL++EEHLNVS
Sbjct: 481 ELLDELVAEEHLNVS 495

BLAST of Carg03001 vs. ExPASy TrEMBL
Match: A0A0A0LGW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G890050 PE=4 SV=1)

HSP 1 Score: 862.8 bits (2228), Expect = 6.8e-247
Identity = 421/490 (85.92%), Postives = 468/490 (95.51%), Query Frame = 0

Query: 3   IVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNMVS 62
           I W+SK +ISK N+  RLF TS E QKKSKSSYISHETAI+LI+NERDPQHAL+IFNMVS
Sbjct: 15  IGWVSKTVISKSNTSIRLFATSKEIQKKSKSSYISHETAIKLIKNERDPQHALDIFNMVS 74

Query: 63  EQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSSMH 122
           EQ+GFNHN+ATY SI+Q LAK KKFQAIDGVLHQMTYDTCK+HEGIFLNLMKH+SKSSMH
Sbjct: 75  EQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSKSSMH 134

Query: 123 ERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCIFN 182
           ERVLDMFYAI+SIVR+KPSLKAISTCLNLLVE+DRVDLARKLLVNA SKLNL PNTCIFN
Sbjct: 135 ERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFN 194

Query: 183 ILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENMVS 242
           ILVKHHCRNG+LQAAFEVV+EMKSARVSYPNL+TYSTLIGGLC++GKLKEAIE FE MVS
Sbjct: 195 ILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVS 254

Query: 243 KDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGKLQ 302
           KD ILPDALTYNILINGFCQ GKVDRAR I+EFMKSNGCSPNVFNYSVLMNG CKEG+LQ
Sbjct: 255 KDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQ 314

Query: 303 EAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNVIL 362
           EAKEVF+E+KSLGMKPDT+SYTTL+NCLCRTGRVDEATELLQ+MKD+DCRAD++T NV+L
Sbjct: 315 EAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVML 374

Query: 363 GGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRGFV 422
           GGLCREGRF+EALDMVQKLPFEG+YLNKGSYRIVLNFL+QKGEL++ATELLGLMLNRGFV
Sbjct: 375 GGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFV 434

Query: 423 PHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVFEL 482
           PH+ATSN+LL+LLCN+GMVKDAVESLLGLLEMGFKPE +SWF+LVDLICRE+K+LPVFEL
Sbjct: 435 PHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLPVFEL 494

Query: 483 LDELISEEHL 493
           LD L+++E+L
Sbjct: 495 LDVLVTQEYL 504

BLAST of Carg03001 vs. ExPASy TrEMBL
Match: A0A5A7T5D4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G005770 PE=4 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 4.4e-246
Identity = 421/490 (85.92%), Postives = 468/490 (95.51%), Query Frame = 0

Query: 3   IVWISKAIISKRNSPARLFTTSIEAQKKSKSSYISHETAIRLIENERDPQHALEIFNMVS 62
           I W+SK   SK N+  RLF TS E QKKSKSSY+SHETAI+LI+NERDPQHAL+IFNMVS
Sbjct: 15  IGWVSKT-FSKSNTSIRLFATSKEIQKKSKSSYVSHETAIKLIKNERDPQHALDIFNMVS 74

Query: 63  EQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSSMH 122
           EQ+GFNHN+ATY SI+Q+LAKSKKFQAIDGVLHQMTYDTCK+HEGIFLNLMKH+S SSMH
Sbjct: 75  EQQGFNHNHATYASIIQKLAKSKKFQAIDGVLHQMTYDTCKVHEGIFLNLMKHFSVSSMH 134

Query: 123 ERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCIFN 182
           ERVLDMFYAI+SIVR+KPSLKA STCLNLLVE+DRVDLARKLLVNA SKLNL PNTCIFN
Sbjct: 135 ERVLDMFYAIKSIVREKPSLKAFSTCLNLLVESDRVDLARKLLVNARSKLNLRPNTCIFN 194

Query: 183 ILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENMVS 242
           ILVKHHCRNG+LQAAFEVV+EMKSARVSYPNL+TYSTLIGGLC++GKLKEAIE FE MVS
Sbjct: 195 ILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVS 254

Query: 243 KDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGKLQ 302
           KDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGC PNVFNYS LMNG CKEG+LQ
Sbjct: 255 KDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCIPNVFNYSALMNGYCKEGRLQ 314

Query: 303 EAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNVIL 362
           EAKEVF+E+KSLGMKPDT+SYTTL+NCLCRTGRVDEATELLQ+MKD+DCRAD++T NV+L
Sbjct: 315 EAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVML 374

Query: 363 GGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRGFV 422
           GGLCREGRFEEALDMVQKLPFEG+YLNKGSYRIVLNFL+QKGEL+RATELLGLMLNRGFV
Sbjct: 375 GGLCREGRFEEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRRATELLGLMLNRGFV 434

Query: 423 PHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVFEL 482
           PH+ATSN+LL+LLCN+GMVKDAVESLLGLLEMGFKPE +SWF+LV+LICRE+K+LP+FEL
Sbjct: 435 PHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVNLICRERKMLPMFEL 494

Query: 483 LDELISEEHL 493
           LDEL++E++L
Sbjct: 495 LDELVTEKYL 503

BLAST of Carg03001 vs. TAIR 10
Match: AT5G18475.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 557.4 bits (1435), Expect = 1.2e-158
Identity = 272/486 (55.97%), Postives = 357/486 (73.46%), Query Frame = 0

Query: 5   WISKAIIS-KRNSPARLFTTSIE-AQKKSKSSYISHETAIRLIENERDPQHALEIFNMVS 64
           W+S    S K+  P+    +SI   +   K+ +ISHE+A+ L++ ERDPQ  L+IFN  S
Sbjct: 21  WVSPICFSEKKKKPSPPPESSISPVETNPKTKFISHESAVSLMKRERDPQGVLDIFNKAS 80

Query: 65  EQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIFLNLMKHYSKSSMH 124
           +QKGFNHNNATY  +L  L + KKF A+D +LHQM Y+TC+  E +FLNLM+H+S+S +H
Sbjct: 81  QQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLH 140

Query: 125 ERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNASSKLNLIPNTCIFN 184
           ++V++MF  IQ I R KPSL AISTCLNLL+++  V+L+RKLL+ A   L L PNTCIFN
Sbjct: 141 DKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFN 200

Query: 185 ILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAIELFENMVS 244
           ILVKHHC+NG++  AF VV EMK + +SYPN ITYSTL+  L    + KEA+ELFE+M+S
Sbjct: 201 ILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMIS 260

Query: 245 KDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNGLCKEGKLQ 304
           K+ I PD +T+N++INGFC+ G+V+RA+KI++FMK NGC+PNV+NYS LMNG CK GK+Q
Sbjct: 261 KEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQ 320

Query: 305 EAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRADSITLNVIL 364
           EAK+ FDE+K  G+K DTV YTTLMNC CR G  DEA +LL +MK   CRAD++T NVIL
Sbjct: 321 EAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVIL 380

Query: 365 GGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLGLMLNRGFV 424
            GL  EGR EEAL M+ +   EG +LNKGSYRI+LN L   GEL++A + L +M  RG  
Sbjct: 381 RGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIW 440

Query: 425 PHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREKKLLPVFEL 484
           PH+AT N L+V LC SG  +  V  L+G L +G  P P SW ++V+ IC+E+KL+ VFEL
Sbjct: 441 PHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFEL 500

Query: 485 LDELIS 489
           LD L+S
Sbjct: 501 LDSLVS 506

BLAST of Carg03001 vs. TAIR 10
Match: AT5G46100.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 228.4 bits (581), Expect = 1.3e-59
Identity = 143/444 (32.21%), Postives = 236/444 (53.15%), Query Frame = 0

Query: 33  SSYISHETAIRLIENERDPQHALEIFNMVSEQ--KGFNHNNATYGSILQRLAKSKKFQAI 92
           S  I+    I+L+  E+D + ++ +F+  + +   G+ H+ +++G ++ RL  + KF+A 
Sbjct: 11  SKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAA 70

Query: 93  DGVLHQMTYDTCKLHEGIFLNLMKHYSKSSMHERVLDMFYAIQSIVRQKPSLKAISTCLN 152
           + ++ +M  + C + E I L++ + Y +       L +F+ ++      PS KA  T L 
Sbjct: 71  EDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF-DCDPSQKAYVTVLA 130

Query: 153 LLVENDRVDLARKLLVNASSKLNLIPNTCIFNILVKHHCRN-GNLQAAFEVVREMKSARV 212
           +LVE ++++LA K   N   ++ L P     N+L+K  CRN G + A  ++  EM   R 
Sbjct: 131 ILVEENQLNLAFKFYKN-MREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPK-RG 190

Query: 213 SYPNLITYSTLIGGLCQSGKLKEAIELFENMVSKDKILPDALTYNILINGFCQGGKVDRA 272
             P+  TY TLI GLC+ G++ EA +LF  MV KD   P  +TY  LING C    VD A
Sbjct: 191 CDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTSLINGLCGSKNVDEA 250

Query: 273 RKIVEFMKSNGCSPNVFNYSVLMNGLCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNC 332
            + +E MKS G  PNVF YS LM+GLCK+G+  +A E+F+ M + G +P+ V+YTTL+  
Sbjct: 251 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITG 310

Query: 333 LCRTGRVDEATELLQKMKDQDCRADSITLNVILGGLCREGRFEEALDMVQKLPFEGYYLN 392
           LC+  ++ EA ELL +M  Q  + D+     ++ G C   +F EA + + ++   G   N
Sbjct: 311 LCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPN 370

Query: 393 KGSYRIVLNFLSQ------KGELKRATELLGLMLNRGFVPHYATSNSLLVLLCNSGMVKD 452
           + ++ I +   ++           RA  L   M +RG      T  SL+  LC  G  + 
Sbjct: 371 RLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQK 430

Query: 453 AVESLLGLLEMGFKPEPDSWFSLV 468
           AV+ +  ++  G  P   +W  L+
Sbjct: 431 AVQLVDEIVTDGCIPSKGTWKLLI 450

BLAST of Carg03001 vs. TAIR 10
Match: AT5G16420.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 228.0 bits (580), Expect = 1.6e-59
Identity = 132/430 (30.70%), Postives = 235/430 (54.65%), Query Frame = 0

Query: 42  IRLIENERDPQHALEIFNMVSE-QKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQM--T 101
           + +I  +++   AL+IF    +   GF HN  TY SIL +L++++ F  ++ ++  +  +
Sbjct: 53  VSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLRNS 112

Query: 102 YDTCKLHEGIFLNLMKHYSKSSMHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRV 161
           Y   K  E +F++L+++Y  +  +E  + +F  I      K S+++++T LN+L++N R 
Sbjct: 113 YPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDF-GVKRSVRSLNTLLNVLIQNQRF 172

Query: 162 DLARKLLVNASSKLNLIPNTCIFNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYS 221
           DL   +  N+     + PN    N+LVK  C+  ++++A++V+ E+ S  +  PNL+TY+
Sbjct: 173 DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGL-VPNLVTYT 232

Query: 222 TLIGGLCQSGKLKEAIELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKS 281
           T++GG    G ++ A  + E M+ +    PDA TY +L++G+C+ G+   A  +++ M+ 
Sbjct: 233 TILGGYVARGDMESAKRVLEEMLDRG-WYPDATTYTVLMDGYCKLGRFSEAATVMDDMEK 292

Query: 282 NGCSPNVFNYSVLMNGLCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDE 341
           N   PN   Y V++  LCKE K  EA+ +FDEM      PD+     +++ LC   +VDE
Sbjct: 293 NEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDE 352

Query: 342 ATELLQKMKDQDCRADSITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLN 401
           A  L +KM   +C  D+  L+ ++  LC+EGR  EA  +  +   +G   +  +Y  ++ 
Sbjct: 353 ACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIA 412

Query: 402 FLSQKGELKRATELLGLMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKP 461
            + +KGEL  A  L   M  R   P+  T N L+  L  +G VK+ V  L  +LE+G  P
Sbjct: 413 GMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFP 472

Query: 462 EPDSWFSLVD 469
              ++  L +
Sbjct: 473 NKTTFLILFE 478

BLAST of Carg03001 vs. TAIR 10
Match: AT1G07740.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 219.5 bits (558), Expect = 5.8e-57
Identity = 125/404 (30.94%), Postives = 231/404 (57.18%), Query Frame = 0

Query: 50  DPQHALEIFNMVSEQKGFNHNNATYGSILQRLAKSKKFQAIDGVLHQMTYDTCKLHEGIF 109
           DP+ AL +F+   E  GF H+  +Y S++ +LAKS+ F A+D +L  + Y   +  E +F
Sbjct: 61  DPEEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLF 120

Query: 110 LNLMKHYSKSSMHERVLDMFYAIQSIVRQKPSLKAISTCLNLLVENDRVDLARKLLVNAS 169
           + L++HY K+   ++ +D+F+ I S    + ++++++T +N+LV+N  ++ A K   + +
Sbjct: 121 MGLIQHYGKAGSVDKAIDVFHKITSFDCVR-TIQSLNTLINVLVDNGELEKA-KSFFDGA 180

Query: 170 SKLNLIPNTCIFNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGK 229
             + L PN+  FNIL+K      + +AA +V  EM    V  P+++TY++LIG LC++  
Sbjct: 181 KDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQ-PSVVTYNSLIGFLCRNDD 240

Query: 230 LKEAIELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYS 289
           + +A  L E+M+ K +I P+A+T+ +L+ G C  G+ + A+K++  M+  GC P + NY 
Sbjct: 241 MGKAKSLLEDMIKK-RIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 300

Query: 290 VLMNGLCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQ 349
           +LM+ L K G++ EAK +  EMK   +KPD V Y  L+N LC   RV EA  +L +M+ +
Sbjct: 301 ILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMK 360

Query: 350 DCRADSITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRA 409
            C+ ++ T  +++ G CR   F+  L+++  +    +     ++  ++  L + G L  A
Sbjct: 361 GCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHA 420

Query: 410 TELLGLMLNRGFVPHYATSNSLLVLLC--NSGMVKDAVESLLGL 452
             +L +M  +          +LL  LC  + G+  +A+  ++ +
Sbjct: 421 CFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEALSEVISI 459

BLAST of Carg03001 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 214.9 bits (546), Expect = 1.4e-55
Identity = 106/316 (33.54%), Postives = 188/316 (59.49%), Query Frame = 0

Query: 175 IPNTCIFNILVKHHCRNGNLQAAFEVVREMKSARVSYPNLITYSTLIGGLCQSGKLKEAI 234
           +P+   +N+++  +C+ G +  A  V+  M  +    P+++TY+T++  LC SGKLK+A+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS----PDVVTYNTILRSLCDSGKLKQAM 228

Query: 235 ELFENMVSKDKILPDALTYNILINGFCQGGKVDRARKIVEFMKSNGCSPNVFNYSVLMNG 294
           E+ + M+ +D   PD +TY ILI   C+   V  A K+++ M+  GC+P+V  Y+VL+NG
Sbjct: 229 EVLDRMLQRD-CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNG 288

Query: 295 LCKEGKLQEAKEVFDEMKSLGMKPDTVSYTTLMNCLCRTGRVDEATELLQKMKDQDCRAD 354
           +CKEG+L EA +  ++M S G +P+ +++  ++  +C TGR  +A +LL  M  +     
Sbjct: 289 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 348

Query: 355 SITLNVILGGLCREGRFEEALDMVQKLPFEGYYLNKGSYRIVLNFLSQKGELKRATELLG 414
            +T N+++  LCR+G    A+D+++K+P  G   N  SY  +L+   ++ ++ RA E L 
Sbjct: 349 VVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLE 408

Query: 415 LMLNRGFVPHYATSNSLLVLLCNSGMVKDAVESLLGLLEMGFKPEPDSWFSLVDLICREK 474
            M++RG  P   T N++L  LC  G V+DAVE L  L   G  P   ++ +++D + +  
Sbjct: 409 RMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAG 468

Query: 475 KLLPVFELLDELISEE 491
           K     +LLDE+ +++
Sbjct: 469 KTGKAIKLLDEMRAKD 479

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7024574.14.6e-282100.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6591691.18.7e-28199.39Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022937178.11.8e-27898.58pentatricopeptide repeat-containing protein At5g18475 isoform X2 [Cucurbita mosc... [more]
XP_022937177.11.8e-27898.78pentatricopeptide repeat-containing protein At5g18475 isoform X1 [Cucurbita mosc... [more]
XP_023536311.14.5e-27797.98pentatricopeptide repeat-containing protein At5g18475 isoform X4 [Cucurbita pepo... [more]
Match NameE-valueIdentityDescription
Q3E9F01.7e-15755.97Pentatricopeptide repeat-containing protein At5g18475 OS=Arabidopsis thaliana OX... [more]
Q9FNL21.8e-5832.21Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX... [more]
Q9FFE32.3e-5830.70Pentatricopeptide repeat-containing protein At5g16420, mitochondrial OS=Arabidop... [more]
Q9LQQ18.2e-5630.94Pentatricopeptide repeat-containing protein At1g07740, mitochondrial OS=Arabidop... [more]
Q3EDF82.0e-5433.54Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1FAE28.8e-27998.78pentatricopeptide repeat-containing protein At5g18475 isoform X1 OS=Cucurbita mo... [more]
A0A6J1FFA88.8e-27998.58pentatricopeptide repeat-containing protein At5g18475 isoform X2 OS=Cucurbita mo... [more]
A0A6J1IJ311.2e-27296.16pentatricopeptide repeat-containing protein At5g18475 OS=Cucurbita maxima OX=366... [more]
A0A0A0LGW76.8e-24785.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G890050 PE=4 SV=1[more]
A0A5A7T5D44.4e-24685.92Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT5G18475.11.2e-15855.97Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G46100.11.3e-5932.21Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G16420.11.6e-5930.70Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G07740.15.8e-5730.94Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G09900.11.4e-5533.54Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 212..262
e-value: 4.5E-16
score: 58.8
coord: 283..332
e-value: 1.2E-16
score: 60.6
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 392..421
e-value: 0.16
score: 12.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 180..212
e-value: 1.9E-6
score: 25.6
coord: 321..354
e-value: 1.7E-10
score: 38.4
coord: 288..320
e-value: 8.1E-11
score: 39.4
coord: 356..389
e-value: 1.3E-5
score: 23.0
coord: 215..250
e-value: 1.4E-8
score: 32.4
coord: 392..423
e-value: 0.0011
score: 17.0
coord: 252..285
e-value: 1.1E-10
score: 39.0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 350..379
e-value: 1.3E-5
score: 24.8
coord: 174..205
e-value: 1.2E-8
score: 34.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 213..247
score: 11.750571
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 284..318
score: 14.151095
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 249..283
score: 13.76745
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 354..388
score: 10.500983
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 177..211
score: 9.744654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 389..423
score: 9.667924
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 319..353
score: 13.011121
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 384..494
e-value: 7.7E-15
score: 57.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 100..242
e-value: 8.3E-25
score: 89.4
coord: 314..383
e-value: 1.6E-21
score: 78.7
coord: 243..313
e-value: 2.5E-26
score: 94.4
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 3..489
NoneNo IPR availablePANTHERPTHR47933:SF23FERTILITY RESTORER HOMOLOGUE A-LIKEcoord: 3..489
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 225..384

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg03001-RACarg03001-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding