Carg02937 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02937
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr09: 2532421 .. 2532708 (-)
RNA-Seq ExpressionCarg02937
SyntenyCarg02937
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGCCCATTATAGAGGCACCGAAATGACGCTTATGCCCCCAGTGGTGACAAAAACATCTTTCCGTTTCGTACACCTTTAAATTCCTACAATAATTCAACTGACACTGATACTGACACCGTACTGGAATCGCGTAATCAATGATGGTTGAAACTTGAACAACGTTCCTCAGCCGTCGATCATCAACTGTACAGAACGCTCCGATCCGACGGCCGATATCGCAGAAGCCGCCATTTTCTTTGTTCTTGCTGCTGCAGAACGGCACCATTCCCGGGTCTTCCGCTGA

mRNA sequence

ATGGGGGCCCATTATAGAGGCACCGAAATGACGCTTATGCCCCCAGTGGTGACAAAAACATCTTTCCGTTTCCCGTCGATCATCAACTGTACAGAACGCTCCGATCCGACGGCCGATATCGCAGAAGCCGCCATTTTCTTTGTTCTTGCTGCTGCAGAACGGCACCATTCCCGGGTCTTCCGCTGA

Coding sequence (CDS)

ATGGGGGCCCATTATAGAGGCACCGAAATGACGCTTATGCCCCCAGTGGTGACAAAAACATCTTTCCGTTTCCCGTCGATCATCAACTGTACAGAACGCTCCGATCCGACGGCCGATATCGCAGAAGCCGCCATTTTCTTTGTTCTTGCTGCTGCAGAACGGCACCATTCCCGGGTCTTCCGCTGA

Protein sequence

MGAHYRGTEMTLMPPVVTKTSFRFPSIINCTERSDPTADIAEAAIFFVLAAAERHHSRVFR
Homology
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BLAST of Carg02937 vs. NCBI nr
Match: KAG7024512.1 (hypothetical protein SDJN02_13328, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126.3 bits (316), Expect = 8.9e-26
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  MGAHYRGTEMTLMPPVVTKTSFRFPSIINCTERSDPTADIAEAAIFFVLAAAERHHSRVF 60
          MGAHYRGTEMTLMPPVVTKTSFRFPSIINCTERSDPTADIAEAAIFFVLAAAERHHSRVF
Sbjct: 1  MGAHYRGTEMTLMPPVVTKTSFRFPSIINCTERSDPTADIAEAAIFFVLAAAERHHSRVF 60

Query: 61 R 62
          R
Sbjct: 61 R 61

The following BLAST results are available for this feature:
BLAST of Carg02937 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024512.18.9e-26100.00hypothetical protein SDJN02_13328, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg02937 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg02937 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg02937 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02937-RACarg02937-RAmRNA