Carg02824 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02824
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
LocationCarg_Chr09: 1896876 .. 1900625 (-)
RNA-Seq ExpressionCarg02824
SyntenyCarg02824
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACGAATTTTCTTTCGTCGAAAATGAGGCGGGCCCGAAAGAAACCCTCCAAGATATCTTCCACTTTCTCGGCTCCGTGTATTTCTTTGAATACCAGAAAACTTCTCTGGCGGTTCGTGTTTCGAACGAAATCGCACAGGAAGAATCCGATTGCTTTGGAACGTGATTGAGAAGAGAAGTAAAGGAGAGAAATGAGTAGTTCTGTGTGTTTCAGGCCTGTGATTATTGCGAAATCGATTGACGGCAGAGGATTTTCTTCTACGAGAATCATACTAATCGGCTCAGAGTTTGCTGCGAATCGTGTTTCGTTCACCGATTCGAGGCTACTGAGCTCTAGGATTTGTGGCGCGCGAGCTTCTATGGTGGATTCTTATGGAAGCTCGGATTTCGTCAAGAGGATGGAACAAGCATGGGAGATCTCTCAGGTACTCGCGATCTTCTACACTCCTCGTAATTTCCTTTCATTTCGTAACTGTTTCATTTACCTATCTCTCTTTCTGTCCTTGAGCGACGGTAGAATGAGTAGATGATTTCTTCCTGTTTCTTAGGCCGTGTTTCTTTCCAACGAGATTGCGATATTCATTTTCTTTAACATTCTGCTAGCATTTATGGCGATGTTTGTGAACCTAATCGCGGAAATTAATCCTGATAATTCAACGAGTCTGTTTGCTTACATTCCTTCCCTGTCTGACGCGGTCAGGAGGAGGAATAGGAACCGCAAATTTCCTAATCCTAATCCGCTGAACCTAGCTTAGTCTGTAAAGATTTCTGGCAACATTTGCTAGTCTAATCGAAGAAACCAGTCCTCATAGCATAACGCGTTGCCTGTCCGCTTATGTTCTTTTCTGCTGTAATGCGATCAGGCTTAGGAGCCGGTGATTTCCTTATCCTCTGGTTCTTCGGTTGTGCTATGTCAGCTTAGAATTAACATTTGTCTTCACGAACATAGTGGTAGAATATTCAAATCCTTTAGATCTCTGCTTTCCACAAGCCTATTCATAGCTTATATATGTTACCTGTTCATCATGTTATTGTAATATGATTTACAATGTTCGAAAGAAAAATTATCCAGTGTGTTTCTATTCGAACTCGAGATGATTCGACATCATGAAGAGCCTAACAGTCCTAATTATATGTTGACAGCAACCAACGCCTATTTGCTGCTCTTCTTGCCACTCAAATGGACATGTGGAGTGCCAATGGTGTAAGGGAACGGGCTTCTTTATTCTCGGAGATAATATGCTCTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTTATTTGCGCCGGCAAGGTATATTCATGAAACTGACTTGATCTCTCTCTCTTTTATTCTCTTTTTTCTTTTCATCCTAGAACAGTGAATTGCAGTACTCGTATTTTTTTTGGATATGTTTGGAACCAGTTTCACGGTGGCTTTTCTGGTGCTAGGAAGTGTTTTTATCCAAATATATCAGATAAATACTTAATAAAACGTGTTTAATGATAAAACAATTTGTTGAGTTTTTATCTAACGGAAAGTATTTTTTAATAATTATATATATTTACTAAGTTACTATGATTTCGTGCATGGAAACATTAGTGAGATGGATATATAGAAGCATGAGCTAGCGTTAGAAACTGTGGTTAGCAAGTATTTAGGAATAGTATGCGTTGTGTTGGATGAAACTAACGATAGAGGCTTTCAAGTCAAAATTATGAAAAGCACCTTCAAGTGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAAGCGTTTTTTAGCCTGTATTCAAATATAAACATTTCAGGTAGGTCAAAGTGTTTTTAACCACGAAAATCAACTTTTTTAATCGTTAAAAGCACTCTTAGTTAAGTAATGGTATAAAGCGCTTTCGAATACTTTGGGGCTTCTATATTTTCTGAAGTACATTTAAAGATGGAATTAGTTTGTGCTTCTTCTATTTTTGACCTAAATGTCTGCTACCTAAATTTTCACTGCACACTTTCCTTCTGCATCTCTACTTCTTTTTGCAACTCGACATATACACTTTCCCGCATTCTCCCCTATTCTGTGTATACTTTCTATTATTAACTTCCTAAACACTCACTTCTTTTTTGAACTGAGGAATGTGTTTGTTGTACCCAAGCACTTTTTCTTTAAATATTTTTAATAAAATCATTTTCATATTTTACCCTCAAATATTTTTTCTTTTTTCTTTAAATACTTTTAATAAAAAAAATTTCATATGATACCTATTGCAAATATGTTTTCTTTTTCTCACTATTATTTTTGGATATTTTAGTTAATCGCTTTAAATTCATTTTTGGTTAACCTATCTCATGTATATGGATCAGAAATAGATTTTAAATGAGTCCTTTTTCTTTGAATTATTATTTTTTCTTTCCTTCAAATTTGACCATACAAGTGTAGTGGTGTTTTCTATTTTTCTTTTTTTTTCTCTGTATTTTTTTTCTCTAGTTGACCACTTTGAATTAATTTTTCGATAATCTATCTTGCACGTATTTTATTTAAAGATAGTTTTTTTTTAAGGTAATACTTCAGATCATCTAGACACAATTTTAATTTTTTTTTTTTTTTCATATTGTTCTTTGAAAAAACCAATTTCATTCAAAAAGCATGTCTTTCGTAAAGGTATTTCAGATGCACTATATTGTGTTTTTAAAAAAGATTACTTGTAATTAGTTGTTAAATACTTTCATTTGTTGCCTTCAGTTAACAACAAAAGAAAACTACAAGAATTTTTGTTTGAAACTAACTTTTAGATAATCCAGAGAATTACTTGGCCTTTATTTCTCCATAATTTATGAACTGCCAGATTGAGTAGTTTAATTAGCATGGTTAACGTGCCATTATTTTTCAGGGCTCTATCCGATGCTTCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGCTGGGTGAGCCCCCCGTTTCTAAATAGACCGAAACTTCAGCAAAAAAGAAAAATGCCAGAGCCTGATCTGATGCTACCAGGTCTAATCAAGTCAACTATAATTTGTCATTATTATTTTTATTAAATCTCATAACCAACGTCTAGTGCAGTTTTCATTAAAATCGAGCAGTCAGCTTGCGAATGGATCGCTGGCTTTTTGCTGCTTTAAGATTCGTTGTATATTGTTTCAGAATCGGTCAAATTCATGTTGTTCATTGAATATCATATTGAAGTTACATTTGGCTCACAAGGTGTGCTAAGCATGCCATTTAACTTCTCGACATCTTTAGCGTCGGCAAGTGAATTGTGTGCACAGATTCTCCTTCATGGTCTCAGTATACGATGTCATGAAAATACCTGCATGAGCCAACAGAAAATTTAATATTTCCTTTTATCTTTGTATTAGTTAATTTTTTTTTTATCTTTGTTTATTTTCCTTAAAAATATGAATCAGTTCAATAATGTTCAAAATCTAAAAAGTATCGGACATGTAAAGCAGAAGACAAAGAAATGTTAGTTCTGTGTTCTCTTTTGGCAGCATATTTTTTACTAAAAATAAAAATCTGCCCTGTTTTTTGGTAAAAATAAGAGCCAAAATATCTAGTTTTATAAGTAAAATTATAAATAGAACTGGAGAAAAGCTACCTATTAATTTTTATTCCTTCACAGGTAGAAAAAGTTTGAAGAGAAAAAATAAGGAAACTGAGAGAGAGAGAGAGAGAGAGAGAAGAAACTTTAAGTCCGAGAAAGAGAACAAATTTAGTTAATTAAAAGTAACTTCAAGCGCGAGTCATAAAAA

mRNA sequence

AAACGAATTTTCTTTCGTCGAAAATGAGGCGGGCCCGAAAGAAACCCTCCAAGATATCTTCCACTTTCTCGGCTCCGTGTATTTCTTTGAATACCAGAAAACTTCTCTGGCGGTTCGTGTTTCGAACGAAATCGCACAGGAAGAATCCGATTGCTTTGGAACGTGATTGAGAAGAGAAGTAAAGGAGAGAAATGAGTAGTTCTGTGTGTTTCAGGCCTGTGATTATTGCGAAATCGATTGACGGCAGAGGATTTTCTTCTACGAGAATCATACTAATCGGCTCAGAGTTTGCTGCGAATCGTGTTTCGTTCACCGATTCGAGGCTACTGAGCTCTAGGATTTGTGGCGCGCGAGCTTCTATGGTGGATTCTTATGGAAGCTCGGATTTCGTCAAGAGGATGGAACAAGCATGGGAGATCTCTCAGCAACCAACGCCTATTTGCTGCTCTTCTTGCCACTCAAATGGACATGTGGAGTGCCAATGGTGTAAGGGAACGGGCTTCTTTATTCTCGGAGATAATATGCTCTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTTATTTGCGCCGGCAAGGGCTCTATCCGATGCTTCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGCTGGGTGAGCCCCCCGTTTCTAAATAGACCGAAACTTCAGCAAAAAAGAAAAATGCCAGAGCCTGATCTGATGCTACCAGGTCTAATCAAGTCAACTATAATTTGTCATTATTATTTTTATTAAATCTCATAACCAACGTCTAGTGCAGTTTTCATTAAAATCGAGCAGTCAGCTTGCGAATGGATCGCTGGCTTTTTGCTGCTTTAAGATTCGTTGTATATTGTTTCAGAATCGGTCAAATTCATGTTGTTCATTGAATATCATATTGAAGTTACATTTGGCTCACAAGGTGTGCTAAGCATGCCATTTAACTTCTCGACATCTTTAGCGTCGGCAAGTGAATTGTGTGCACAGATTCTCCTTCATGGTCTCAGTATACGATGTCATGAAAATACCTGCATGAGCCAACAGAAAATTTAATATTTCCTTTTATCTTTGTATTAGTTAATTTTTTTTTTATCTTTGTTTATTTTCCTTAAAAATATGAATCAGTTCAATAATGTTCAAAATCTAAAAAGTATCGGACATGTAAAGCAGAAGACAAAGAAATGTTAGTTCTGTGTTCTCTTTTGGCAGCATATTTTTTACTAAAAATAAAAATCTGCCCTGTTTTTTGGTAAAAATAAGAGCCAAAATATCTAGTTTTATAAGTAAAATTATAAATAGAACTGGAGAAAAGCTACCTATTAATTTTTATTCCTTCACAGGTAGAAAAAGTTTGAAGAGAAAAAATAAGGAAACTGAGAGAGAGAGAGAGAGAGAGAGAAGAAACTTTAAGTCCGAGAAAGAGAACAAATTTAGTTAATTAAAAGTAACTTCAAGCGCGAGTCATAAAAA

Coding sequence (CDS)

ATGAGTAGTTCTGTGTGTTTCAGGCCTGTGATTATTGCGAAATCGATTGACGGCAGAGGATTTTCTTCTACGAGAATCATACTAATCGGCTCAGAGTTTGCTGCGAATCGTGTTTCGTTCACCGATTCGAGGCTACTGAGCTCTAGGATTTGTGGCGCGCGAGCTTCTATGGTGGATTCTTATGGAAGCTCGGATTTCGTCAAGAGGATGGAACAAGCATGGGAGATCTCTCAGCAACCAACGCCTATTTGCTGCTCTTCTTGCCACTCAAATGGACATGTGGAGTGCCAATGGTGTAAGGGAACGGGCTTCTTTATTCTCGGAGATAATATGCTCTGTCAAGTTCCTTCCAGAAACACTAGCTGTGTTATTTGCGCCGGCAAGGGCTCTATCCGATGCTTCGACTGTAAGGGAACAGGTTACCGGGCCAAGTGGCTGGGTGAGCCCCCCGTTTCTAAATAG

Protein sequence

MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDSYGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNTSCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK
Homology
[Close]
BLAST of Carg02824 vs. NCBI nr
Match: KAG7024403.1 (hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.3 bits (830), Expect = 5.6e-85
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK
Sbjct: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 153

[Close]
BLAST of Carg02824 vs. NCBI nr
Match: XP_022935899.1 (uncharacterized protein LOC111442664 [Cucurbita moschata])

HSP 1 Score: 321.2 bits (822), Expect = 4.7e-84
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGSIRC DCKGTGYRAKWLGEPPVSK
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWLGEPPVSK 153

[Close]
BLAST of Carg02824 vs. NCBI nr
Match: XP_022977132.1 (uncharacterized protein LOC111477293 [Cucurbita maxima])

HSP 1 Score: 317.8 bits (813), Expect = 5.2e-83
Identity = 148/153 (96.73%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+SSVCFRPVI+AKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARAS+VDS
Sbjct: 1   MTSSVCFRPVILAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASLVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGSIRC DCKGTGYRAKWLGEPP+SK
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWLGEPPISK 153

[Close]
BLAST of Carg02824 vs. NCBI nr
Match: XP_023534880.1 (uncharacterized protein LOC111796478 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 311.6 bits (797), Expect = 3.7e-81
Identity = 146/153 (95.42%), Postives = 150/153 (98.04%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+SSVCF PVI+AKSIDGRGFSSTRIILIGSEFAANRV FTDSRLLSSRICGARASMV+S
Sbjct: 1   MTSSVCFGPVIMAKSIDGRGFSSTRIILIGSEFAANRVLFTDSRLLSSRICGARASMVNS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGSIRC DCKGTGYRAKWLGEPP+SK
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWLGEPPISK 153

[Close]
BLAST of Carg02824 vs. NCBI nr
Match: KAG6591516.1 (hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 2.0e-79
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWL 147
           SCVICAGKGSIRC DCKGTGYRAKWL
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWL 146

[Close]
BLAST of Carg02824 vs. ExPASy TrEMBL
Match: A0A6J1F6R2 (uncharacterized protein LOC111442664 OS=Cucurbita moschata OX=3662 GN=LOC111442664 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 2.3e-84
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS
Sbjct: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGSIRC DCKGTGYRAKWLGEPPVSK
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWLGEPPVSK 153

[Close]
BLAST of Carg02824 vs. ExPASy TrEMBL
Match: A0A6J1IHL0 (uncharacterized protein LOC111477293 OS=Cucurbita maxima OX=3661 GN=LOC111477293 PE=4 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 2.5e-83
Identity = 148/153 (96.73%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+SSVCFRPVI+AKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARAS+VDS
Sbjct: 1   MTSSVCFRPVILAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASLVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGSIRC DCKGTGYRAKWLGEPP+SK
Sbjct: 121 SCVICAGKGSIRCSDCKGTGYRAKWLGEPPISK 153

[Close]
BLAST of Carg02824 vs. ExPASy TrEMBL
Match: A0A1S3BVK1 (chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103493730 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70
Identity = 128/153 (83.66%), Postives = 137/153 (89.54%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVC + VI+AKSIDG+GF STR + I S FAA RVS  DSRL  SRICG RASMVDS
Sbjct: 1   MSSSVCCKSVIMAKSIDGKGFPSTRTVSICSRFAAIRVSLIDSRLFKSRICGVRASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQP PICCSSC+SNGHVEC+WC+GTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPRPICCSSCNSNGHVECKWCRGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGS+ C DCKGTGYRAKWLGEPP+SK
Sbjct: 121 SCVICAGKGSMCCSDCKGTGYRAKWLGEPPISK 153

[Close]
BLAST of Carg02824 vs. ExPASy TrEMBL
Match: A0A0A0L478 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651790 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.1e-70
Identity = 127/153 (83.01%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           MSSSVC + VI+AKSID +GF+ TR + I S FAANRVS  DSRL  SRICG RASMVDS
Sbjct: 1   MSSSVCCKSVIMAKSIDSKGFACTRTVSICSRFAANRVSLIDSRLFKSRICGVRASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           YGSSDFVKRMEQAWEISQQP PICCSSC+SNGHVEC+WC+GTGFFILGDNMLCQVPSRNT
Sbjct: 61  YGSSDFVKRMEQAWEISQQPRPICCSSCNSNGHVECKWCRGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGS  C DCKGTGYRAKWLGEPP+SK
Sbjct: 121 SCVICAGKGSRCCSDCKGTGYRAKWLGEPPISK 153

[Close]
BLAST of Carg02824 vs. ExPASy TrEMBL
Match: A0A6J1CHM4 (uncharacterized protein LOC111011719 OS=Momordica charantia OX=3673 GN=LOC111011719 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.0e-68
Identity = 125/153 (81.70%), Postives = 134/153 (87.58%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+S VC RPV  AK IDGRGF STRI+ IG+ FAA  +SF DS++LS RICG RASMVDS
Sbjct: 1   MASCVCCRPVNTAKPIDGRGFVSTRIVPIGAGFAAPHLSFNDSKILSPRICGVRASMVDS 60

Query: 61  YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRNT 120
           +GSSDF KRMEQAWEISQQP PI CSSCHSNGHVEC+WC GTGFFILGDNMLCQVPSRNT
Sbjct: 61  HGSSDFAKRMEQAWEISQQPRPIGCSSCHSNGHVECKWCAGTGFFILGDNMLCQVPSRNT 120

Query: 121 SCVICAGKGSIRCFDCKGTGYRAKWLGEPPVSK 154
           SCVICAGKGS+ C DCKGTGYRAKWLGEPPVSK
Sbjct: 121 SCVICAGKGSMGCSDCKGTGYRAKWLGEPPVSK 153

[Close]
BLAST of Carg02824 vs. TAIR 10
Match: AT2G24860.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 87/152 (57.24%), Postives = 106/152 (69.74%), Query Frame = 0 

Query: 1   MSSSVCFRPVIIAKSIDGRGFSSTRIILIGSEFAANRVSFTDSRLLSSRICGARASMVDS 60
           M+  +C    ++AKSI    ++S RI  +G      R   T +          +AS VDS
Sbjct: 1   MTICMCCDSHLVAKSI-LNPWNSPRITKLGFVPVVRRFPATTT---------VKASAVDS 60

Query: 61  -YGSSDFVKRMEQAWEISQQPTPICCSSCHSNGHVECQWCKGTGFFILGDNMLCQVPSRN 120
              SS+F KRM+QAW ISQQP+P+ CSSC+S GHVEC+WC GTGFFILGDNMLCQVPSRN
Sbjct: 61  PESSSNFAKRMDQAWIISQQPSPVGCSSCNSKGHVECKWCAGTGFFILGDNMLCQVPSRN 120

Query: 121 TSCVICAGKGSIRCFDCKGTGYRAKWLGEPPV 152
           TSCVIC+G+GS  C DCKGTG+RAKWL +PPV
Sbjct: 121 TSCVICSGQGSASCSDCKGTGFRAKWLEKPPV 142

The following BLAST results are available for this feature:
BLAST of Carg02824 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7024403.15.6e-85100.00hypothetical protein SDJN02_13217 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022935899.14.7e-8499.35uncharacterized protein LOC111442664 [Cucurbita moschata][more]
XP_022977132.15.2e-8396.73uncharacterized protein LOC111477293 [Cucurbita maxima][more]
XP_023534880.13.7e-8195.42uncharacterized protein LOC111796478 [Cucurbita pepo subsp. pepo][more]
KAG6591516.12.0e-7999.32hypothetical protein SDJN03_13862, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Carg02824 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg02824 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1F6R22.3e-8499.35uncharacterized protein LOC111442664 OS=Cucurbita moschata OX=3662 GN=LOC1114426... [more]
A0A6J1IHL02.5e-8396.73uncharacterized protein LOC111477293 OS=Cucurbita maxima OX=3661 GN=LOC111477293... [more]
A0A1S3BVK12.4e-7083.66chaperone protein DnaJ OS=Cucumis melo OX=3656 GN=LOC103493730 PE=4 SV=1[more]
A0A0A0L4787.1e-7083.01Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651790 PE=4 SV=1[more]
A0A6J1CHM43.0e-6881.70uncharacterized protein LOC111011719 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
BLAST of Carg02824 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24860.11.3e-4257.24DnaJ/Hsp40 cysteine-rich domain superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852:SF66OS09G0423700 PROTEINcoord: 39..153
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 39..153
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 83..142

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02824-RACarg02824-RAmRNA