Carg02810 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02810
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Protein of unknown function (DUF1350)
Location	Carg_Chr09: 1819698 .. 1824378 (-)
RNA-Seq Expression	Carg02810
Synteny	Carg02810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGATGGTCTCGAATGGATATGCCGGCGGAGGAAGCAGTGGTTATGGATACGATGGTAGAAATTCGTTTAGAAACAAGATTTACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGATGAGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGGTTTTTTTCCCTTCCGTTTCTTCGCTATCATTTGTATTTCGATGTAGCTACTTTGTTTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATTTCAGTACCTTATATTTTGACTTTCGATCATGACATTGCTGCGAGACAAGTTTTCGAGAGGTTTTGATGGCTGTTTGGATGCCATTTTAGCGTCCGGATTGCTCGATGAAGATGTTTCACATGCTCAACTCGTTAACCTTTCTCTACCGTGGATCATAGGTGAGTCAACTCGTGATTGTTGTCTTCATTTCCATAGGATGAAATGCTGAGGTAATTTCATTTTGTTGTTTATTGGTAGCAATGGCGCGCTTCCGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGTTTGGATTCTTACTTTTCTTCTGGTTGTTTTAGTCTTTTAGTTTACTTGTGGAAATGAATTGGACGCAACTGACTAGCTAATCACCGAGATGATAATTTTCTTATCAATTTCAATGGTTGTGTGACATAATAAATATTCTCGTTGTGGAAGGATAATGCTATAATCTCCTTAAACAACAGGCCAGCAACAGAGGCTGTTCCTTACTTTGAGCAGGTAAGGCTGGCATAGATCACTGTTCTTATTTTGATGGATTTCATGGTTAGTTTGTTTGGGCTTGTGCATGCTCAAAAGTATCAACTCCTTTTCACTTCTAAGAGCGATCGCTTATGGAAAAGATATCAATTCCAATATCTGAGACAATTTGCATTTTACCTCTGGAGATGTTTGTTTGGATTGTACAAAAGGTGAGAACCTGGTGATTTTCATGATCTTTCTGAATGAACAGGTTTTGGAAATTGAAGTGAAGCATGATCTTGAATTTTCAGTTTGAGGGAAGGTGTTTAATCTATAGGGGCGCTCGTCCTGAGTGAATCATTTGTTTTTTTGGATTCCATGAACTAAAGATAGGACGTAGTGATCATTCACTCCTAGATTTTGAATGATAGCAGTATAATAACCCCTAATTGAAGCTAACTCACTTTGTTCTTGATTTCTTTCATGTATTGGACATGGCATTGAGAATAGATAGACATCAAAGAAGACTGCATAACACGAACTACTGTATTCCATTTGAGAATATTGATTGAATGCTTCTCTAATCATTTGAGAATATTGTTTGATGCTGATTCACATTCATCCTTGTCATTTTCATTCGATTCAAATACTACTTGCTACTTGTGCTATAATTTCTTTTTTTCTTGAATCATGCAAAAAATCGTATCCTTGATCTTTGATGCGTTCACGACGAAACTTTCATTTACTATCCTTGTTTGTATGCAGGGGATGTGTGGAAGATCTTGCTTGATGCTGCTGGAGCTATTGTTTCAGACAGAGATCAATCGAGTAAGTCTTGAATTCTCTGACTAAAATTTGTTGATCAGCTGCCCTCAGTTTTAAACCACGTAACCCTTTAAAATTTCACGTCTGCTTCTTTGCTTTGTCTCTTCCTTTTTAGAATGGAAGCGGTTAGGAATCGGATCTCCACAATGGTATGATATTGTACCCATTTAAACATAAGTTCTCATGGCCTAGTACGAATGAAGATAATATTCCTCCCCTATAAACCCATGATTTTCTAAAGAACATGCCTGGTTGATTATGGCTGCTTCTTTCTTTTTTTTTTTTTTTTAACGTGATTGGGTTGGGTCGGGTTGACTCAGCCCTTTGCCCATCGAATTTGTACCCAATCTATAAATGGGCTTTGGTCTAAAAAATTCAACTCATCTCGAAATGTTATCTAGGCCAATCCAACCTTTATAATTCAAGTTGGGTTTTGGATTATTGGTTGAAAACACACTCCTACTTGACGCTTTTAAAAATTAAGTGTATCAATGCACCTTTTTAAAGTTTTTACATGTAATAGATCAATTAAGTCTCATTTCATAATCATTTAAATTTTTAATTTTTGGGTTAAGAATTAAGTTTTTAAAATCCATGAAAACGAAAATTTTGTAAATAAAAAATAAGTGTTTTTAAAATATATTTTTGTTGAAATTTTGTTAAGAATATATTGTAAAGAAATTGTCAAAATTCTAAAACTTTTTTAAAGAGACTAAAAAAAGAAAAAAGAAACAGGAACAATTTGGGAGAGGACAAGGCGGGGAAGAATATGGGAGGGTCGCGGGTGAGATCAAGAATCAGATGATCCAATCATTTGTTTCTTTTTCTTTTTCTTTTTCTCTCTCTTTCTCTTTCGTTAATTATTGTTTGATCGCTCTGCTATTTGCTGTCTGGGCGATTTCTTCAGTTCCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGTAAAACGTGGTTGCTCTTCCAATCCGAAGAGCCTTGTGAGTCTATGACCTCCGCCATTGCGCCATGAAACGCCACATACAAATGCAACAAAGGCACGTTTCCTTTTCCTTGCATCATTTCAATCTCTCTCTCTATTTCTTTTTTTTCCCTTTTTGTCGGCTCTTCTGATACATGTAGGAGTAAGATTTGTTCTGCAGTTCTTTTTTTTTTTTTTTCGTTTGCCCTAAATTTTGTTTTCTTATGATTCGCATCATCGTTTTTAGTTCAATTTTATATGAATATCCTTTGTTCCAAATTTAGGATGGTTTCTGCTACTGTTGGAGTCGGTTCTGGGCTTTATTTTTTATTTTTTAGGCTGAAACTCTATTTTAGTGTTCATTTTAGTCAATGTAATGTAAAATTTTGCAAAGTTTAACCCAAAGTCTATGCCCAATGAAAACAATAAGATAAATGGACCAAACTAGTCCCTTAAAAGTACAAAACCGAAGCTGAAACTATGATAAAAACAAAAGAGTATTTAAACTTTGGATAGACTTTTGGAATTTGGTGTCTACTTCCTCGACATTGCAGGAAATGGGATAAAGATCCGTCTCGAATTTCAGTTCTAAAAAATTATTGTCTTAACCTTTTGAACTCACAAAATTGGGGTTATTTCAAACCTGTATGAAACTCCAATTGCCTTTTCCAATCTGGAATGGACTTTTCAGATCTTCGAATTTAGTGGACTCTTTTCTTTAGGCAACCATTTTAACATCGAGAAATTTTCTTTTCATGTAAACTTGGACTAACTTAGCAAGTTATTGATAATTGATAAACCGCAAGAACCTACTTGCCATGGGGCTACCACTGTCTGGAAGAATAATATTTCCTTACTCACCCGACGTCAGAAACTTCTTACCGCTCACCCTGAATTTTTTACATATGGATCTGAGAGAAATTTTCTTTTCTTTTCCTTAGGAAAATATAAATACTTATTAAGAATTAGTGATTGTGACAGACATTAATTAGCCACTTAATTAAGTATGAATGAGTGGTGGTTCACAGAAACTAATTAGCCACTTATTAAGTATTGAGAACAGCAACAAAGACAGGATCAGCAGGATCAGCAAATTATACGAACACTTCATGTAACCGCCTAAATATGCTAAGAGATATTATACTCTTTGGACTTTCCTTTTCAGACTTCCCTTTAAAGTTTTAAAATGCATTTATTAGGGAGAGGTTTTGACATCGTTACTCTTAGAAGGAATGCTTTGTTTCACCTCTTCAATTGACGTGGGGTCTCACAATGCACCTGCTTAGAGGCCCAGCGTCCTGGTTTTGATACCATTTTTAATTGTCCAAGCCCACCGTGAGTAGATATTGTCCGCTTTAGTCCGTTACATATAACCACAGCCTCACGATTAAAAATCTATCTACCGTGAAAAAGTTTCTACACTTTTTTGAGAATGCTTCGTTTCTTTCTTCAATTAATCTGGGATCTTACATTTATGTCCAATTTGAACTTGAAGGAAGAAGAAGGAAATCCAGGAGAAATCCCAGGATATACCAAGGTGGCTCCTGTGATTGCTTATTTTGTTTGGAAAATGGATCTGCCTTAGTTTCTTCTCCACCTGTTGCACAGAATCTCAATACAGAAAACCCTATGCAAAATTTAGGTCCGAATCTCAATTTTGATAATAATTTCAAACACTGTTGATACTCGTTCAGCTGTCTGTGACAACAGTTATTCATTTTATTCACTTTCATTCTGGTCCCCATCTTCATATATCTGTCCCACTGTTTCTTTTGCTGCTACTTATCAGGAAGTTCCCAAATCAATTTCATTATCCAAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGGGTGATATTTTGCAGCAGCATTCGAATTATCAGTGTGCAGAGGAGGATTACCTACAAGATCCTGATCTATCCTGGTATGATTTTAACTTTTCTTCATATTAATGAAATTCGAACACAAAGAAAAAAATATATATATTTAGGAGCAAGCTTTATGATCTATTTATTTGGGTGCTTGCATTTTGGATTTGCAGCTTCGACATTGGGGAGATTGGTTAG

mRNA sequence

ATGAAGATGATGGTCTCGAATGGATATGCCGGCGGAGGAAGCAGTGGTTATGGATACGATGGTAGAAATTCGTTTAGAAACAAGATTTACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGATGAGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGGTTTTTTTCCCTTCCGTTTCTTCGCTATCATTTGTATTTCGATGTAGCTACTTTGTTTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATTTCAGTACCTTATATTTTGACTTTCGATCATGACATTGCTGCGAGACAAGTTTTCGAGAGCAATGGCGCGCTTCCGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGATAATGCTATAATCTCCTTAAACAACAGGCCAGCAACAGAGGCTGTTCCTTACTTTGAGCAGGGGATGTGTGGAAGATCTTGCTTGATGCTGCTGGAGCTATTGTTTCAGACAGAGATCAATCGATTCCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGTAAAACGTGGTTGCTCTTCCAATCCGAAGAGCCTTGAAGTTCCCAAATCAATTTCATTATCCAAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGGGTGATATTTTGCAGCAGCATTCGAATTATCAGTGTGCAGAGGAGGATTACCTACAAGATCCTGATCTATCCTGCTTCGACATTGGGGAGATTGGTTAG

Coding sequence (CDS)

ATGAAGATGATGGTCTCGAATGGATATGCCGGCGGAGGAAGCAGTGGTTATGGATACGATGGTAGAAATTCGTTTAGAAACAAGATTTACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGATGAGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGGTTTTTTTCCCTTCCGTTTCTTCGCTATCATTTGTATTTCGATGTAGCTACTTTGTTTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATTTCAGTACCTTATATTTTGACTTTCGATCATGACATTGCTGCGAGACAAGTTTTCGAGAGCAATGGCGCGCTTCCGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGATAATGCTATAATCTCCTTAAACAACAGGCCAGCAACAGAGGCTGTTCCTTACTTTGAGCAGGGGATGTGTGGAAGATCTTGCTTGATGCTGCTGGAGCTATTGTTTCAGACAGAGATCAATCGATTCCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGTAAAACGTGGTTGCTCTTCCAATCCGAAGAGCCTTGAAGTTCCCAAATCAATTTCATTATCCAAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGGGTGATATTTTGCAGCAGCATTCGAATTATCAGTGTGCAGAGGAGGATTACCTACAAGATCCTGATCTATCCTGCTTCGACATTGGGGAGATTGGTTAG

Protein sequence

MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFESNGALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINRFHYTCSCGCAARLPWIIVKRGCSSNPKSLEVPKSISLSKEEGILMASDVFWSNNDPTGESEKGMQQGDILQQHSNYQCAEEDYLQDPDLSCFDIGEIG

Homology

[Close]

BLAST of Carg02810 vs. NCBI nr
Match: KAG7024390.1 (hypothetical protein SDJN02_13204, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 570.1 bits (1468), Expect = 1.1e-158
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG
Sbjct: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFESNG 120
           AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFESNG
Sbjct: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFESNG 120

Query: 121 ALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINRF 180
           ALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINRF
Sbjct: 121 ALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINRF 180

Query: 181 HYTCSCGCAARLPWIIVKRGCSSNPKSLEVPKSISLSKEEGILMASDVFWSNNDPTGESE 240
           HYTCSCGCAARLPWIIVKRGCSSNPKSLEVPKSISLSKEEGILMASDVFWSNNDPTGESE
Sbjct: 181 HYTCSCGCAARLPWIIVKRGCSSNPKSLEVPKSISLSKEEGILMASDVFWSNNDPTGESE 240

Query: 241 KGMQQGDILQQHSNYQCAEEDYLQDPDLSCFDIGEIG 278
           KGMQQGDILQQHSNYQCAEEDYLQDPDLSCFDIGEIG
Sbjct: 241 KGMQQGDILQQHSNYQCAEEDYLQDPDLSCFDIGEIG 277

[Close]

BLAST of Carg02810 vs. NCBI nr
Match: KAG6591504.1 (hypothetical protein SDJN03_13850, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.8 bits (930), Expect = 2.6e-96
Identity = 196/277 (70.76%), Postives = 196/277 (70.76%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPP RGKLLGAIIKFLDGAIIG
Sbjct: 66  MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPPRGKLLGAIIKFLDGAIIG 125

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFESNG 120
           AIPEVTC                                                  SNG
Sbjct: 126 AIPEVTC--------------------------------------------------SNG 185

Query: 121 ALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINRF 180
           ALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINR 
Sbjct: 186 ALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINR- 245

Query: 181 HYTCSCGCAARLPWIIVKRGCSSNPKSLEVPKSISLSKEEGILMASDVFWSNNDPTGESE 240
                                       EVPKSISLSKE GILMASDVFWSNNDPTGESE
Sbjct: 246 ----------------------------EVPKSISLSKEGGILMASDVFWSNNDPTGESE 263

Query: 241 KGMQQGDILQQHSNYQCAEEDYLQDPDLSCFDIGEIG 278
           KGMQQGDILQQHSNYQCAEEDYLQDPDLSCFDIGEIG
Sbjct: 306 KGMQQGDILQQHSNYQCAEEDYLQDPDLSCFDIGEIG 263

[Close]

BLAST of Carg02810 vs. NCBI nr
Match: XP_022977122.1 (uncharacterized protein LOC111477284 isoform X2 [Cucurbita maxima])

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-52
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MKMMVSNGYAG GSS  GYDGRNS RNKI+KRLEPCLVIPP RGKLLGAIIKFLDGAIIG
Sbjct: 1   MKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIKFLDGAIIG 60

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFES-N 120
           AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPY L+FDH IAARQVFE  +
Sbjct: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAARQVFERFH 120

Query: 121 GALPQVL 127
           G L  +L
Sbjct: 121 GRLDAIL 127

[Close]

BLAST of Carg02810 vs. NCBI nr
Match: XP_022977121.1 (uncharacterized protein LOC111477284 isoform X1 [Cucurbita maxima])

HSP 1 Score: 217.2 bits (552), Expect = 1.7e-52
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MKMMVSNGYAG GSS  GYDGRNS RNKI+KRLEPCLVIPP RGKLLGAIIKFLDGAIIG
Sbjct: 1   MKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIKFLDGAIIG 60

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFES-N 120
           AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPY L+FDH IAARQVFE  +
Sbjct: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAARQVFERFH 120

Query: 121 GALPQVL 127
           G L  +L
Sbjct: 121 GRLDAIL 127

[Close]

BLAST of Carg02810 vs. NCBI nr
Match: XP_022140535.1 (uncharacterized protein LOC111011170 [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 3.3e-43
Identity = 110/192 (57.29%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M  NGYAG G SGYG+ GRNS  N+IYKRLE CLVIPP RGK   AIIKFL GA IG
Sbjct: 71  MKRMALNGYAGRGGSGYGFSGRNSNINRIYKRLESCLVIPPPRGKPPRAIIKFLGGAFIG 130

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFE--- 120
           AIPEVT  +                L ELLAKEGFLIISVPY +TFDH  A +QVFE   
Sbjct: 131 AIPEVTYSY----------------LLELLAKEGFLIISVPYNVTFDHADATKQVFERFH 190

Query: 121 -------------------------------SNGALPQVLTGSYFAAKIPKDNAIISLNN 159
                                          SNGAL QVLTGSYFA K+PK NAIIS NN
Sbjct: 191 ACLDTILASGLPDEYLSSAQLVNLPLFCVGHSNGALLQVLTGSYFAEKLPKANAIISFNN 246

[Close]

BLAST of Carg02810 vs. ExPASy TrEMBL
Match: A0A6J1IIY0 (uncharacterized protein LOC111477284 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477284 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 8.4e-53
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MKMMVSNGYAG GSS  GYDGRNS RNKI+KRLEPCLVIPP RGKLLGAIIKFLDGAIIG
Sbjct: 1   MKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIKFLDGAIIG 60

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFES-N 120
           AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPY L+FDH IAARQVFE  +
Sbjct: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAARQVFERFH 120

Query: 121 GALPQVL 127
           G L  +L
Sbjct: 121 GRLDAIL 127

[Close]

BLAST of Carg02810 vs. ExPASy TrEMBL
Match: A0A6J1IHK1 (uncharacterized protein LOC111477284 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477284 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 8.4e-53
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MKMMVSNGYAG GSS  GYDGRNS RNKI+KRLEPCLVIPP RGKLLGAIIKFLDGAIIG
Sbjct: 1   MKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIKFLDGAIIG 60

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFES-N 120
           AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPY L+FDH IAARQVFE  +
Sbjct: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAARQVFERFH 120

Query: 121 GALPQVL 127
           G L  +L
Sbjct: 121 GRLDAIL 127

[Close]

BLAST of Carg02810 vs. ExPASy TrEMBL
Match: A0A6J1CFC2 (uncharacterized protein LOC111011170 OS=Momordica charantia OX=3673 GN=LOC111011170 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.6e-43
Identity = 110/192 (57.29%), Postives = 116/192 (60.42%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M  NGYAG G SGYG+ GRNS  N+IYKRLE CLVIPP RGK   AIIKFL GA IG
Sbjct: 71  MKRMALNGYAGRGGSGYGFSGRNSNINRIYKRLESCLVIPPPRGKPPRAIIKFLGGAFIG 130

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFE--- 120
           AIPEVT  +                L ELLAKEGFLIISVPY +TFDH  A +QVFE   
Sbjct: 131 AIPEVTYSY----------------LLELLAKEGFLIISVPYNVTFDHADATKQVFERFH 190

Query: 121 -------------------------------SNGALPQVLTGSYFAAKIPKDNAIISLNN 159
                                          SNGAL QVLTGSYFA K+PK NAIIS NN
Sbjct: 191 ACLDTILASGLPDEYLSSAQLVNLPLFCVGHSNGALLQVLTGSYFAEKLPKANAIISFNN 246

[Close]

BLAST of Carg02810 vs. ExPASy TrEMBL
Match: A0A6J1FN34 (uncharacterized protein LOC111445763 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445763 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.4e-41
Identity = 109/192 (56.77%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M+SNGY G GSS      RNS  NKIYKRLE CLV+PP +GKL  AIIKFL GA IG
Sbjct: 71  MKTMISNGYVGRGSS------RNSNINKIYKRLESCLVVPPPKGKLPRAIIKFLGGAFIG 130

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFE--- 120
           AIPEVT  +                L ELLAKEGFLIISVPY +TFDH  A RQVFE   
Sbjct: 131 AIPEVTYSY----------------LIELLAKEGFLIISVPYNVTFDHADATRQVFERFH 190

Query: 121 -------------------------------SNGALPQVLTGSYFAAKIPKDNAIISLNN 159
                                          SNGAL QVLTGSYFA KIPK NAIIS NN
Sbjct: 191 ACLDTILASGLPDEDISSAQLVNLPLFSVGHSNGALLQVLTGSYFAEKIPKANAIISFNN 240

[Close]

BLAST of Carg02810 vs. ExPASy TrEMBL
Match: A0A6J1FIS9 (uncharacterized protein LOC111445763 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445763 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 7.4e-41
Identity = 109/192 (56.77%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 1   MKMMVSNGYAGGGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M+SNGY G GSS      RNS  NKIYKRLE CLV+PP +GKL  AIIKFL GA IG
Sbjct: 71  MKTMISNGYVGRGSS------RNSNINKIYKRLESCLVVPPPKGKLPRAIIKFLGGAFIG 130

Query: 61  AIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYILTFDHDIAARQVFE--- 120
           AIPEVT  +                L ELLAKEGFLIISVPY +TFDH  A RQVFE   
Sbjct: 131 AIPEVTYSY----------------LIELLAKEGFLIISVPYNVTFDHADATRQVFERFH 190

Query: 121 -------------------------------SNGALPQVLTGSYFAAKIPKDNAIISLNN 159
                                          SNGAL QVLTGSYFA KIPK NAIIS NN
Sbjct: 191 ACLDTILASGLPDEDISSAQLVNLPLFSVGHSNGALLQVLTGSYFAEKIPKANAIISFNN 240

[Close]

BLAST of Carg02810 vs. TAIR 10
Match: AT3G43540.1 (Protein of unknown function (DUF1350) )

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-32
Identity = 83/170 (48.82%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 24  SFRNKIYKRLEPCLVI-PPMRGKLLGAIIKFLDGAIIGAIPEVTCRFFSLPFLRYHLYFD 83
           S  NK+Y RL+ CLVI PP + K   AI+KFL GA +GA+PE+T  +             
Sbjct: 38  SRNNKVYTRLDSCLVIPPPPKFKKPRAIVKFLGGAFVGAVPELTYSY------------- 97

Query: 84  VATLFELLAKEGFLIISVPYILTFDHDIAARQVFE------------------------- 143
              L ELLAKEG+LI+SVPY +TFDH+ AA+QV+E                         
Sbjct: 98  ---LKELLAKEGYLIVSVPYNVTFDHEQAAKQVYERFNSCLDTIVSSGIPNSNLKPGDLA 157

Query: 144 ---------SNGALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQ 159
                    SNGAL QVLTGSYFA KIPK NAIIS NN+ ATEAVPYFEQ
Sbjct: 158 DLPLFSVGHSNGALLQVLTGSYFAEKIPKVNAIISFNNKSATEAVPYFEQ 191

[Close]

BLAST of Carg02810 vs. TAIR 10
Match: AT3G43540.2 (Protein of unknown function (DUF1350) )

HSP 1 Score: 99.8 bits (247), Expect = 3.8e-21
Identity = 58/107 (54.21%), Postives = 65/107 (60.75%), Query Frame = 0


Query: 86  LFELLAKEGFLIISVPYILTFDHDIAARQVFE---------------------------- 145
           L ELLAKEG+LI+SVPY +TFDH+ AA+QV+E                            
Sbjct: 13  LKELLAKEGYLIVSVPYNVTFDHEQAAKQVYERFNSCLDTIVSSGIPNSNLKPGDLADLP 72

Query: 146 ------SNGALPQVLTGSYFAAKIPKDNAIISLNNRPATEAVPYFEQ 159
                 SNGAL QVLTGSYFA KIPK NAIIS NN+ ATEAVPYFEQ
Sbjct: 73  LFSVGHSNGALLQVLTGSYFAEKIPKVNAIISFNNKSATEAVPYFEQ 119

The following BLAST results are available for this feature:

BLAST of Carg02810 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7024390.1	1.1e-158	100.00	hypothetical protein SDJN02_13204, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6591504.1	2.6e-96	70.76	hypothetical protein SDJN03_13850, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022977122.1	1.7e-52	87.40	uncharacterized protein LOC111477284 isoform X2 [Cucurbita maxima]	[more]
XP_022977121.1	1.7e-52	87.40	uncharacterized protein LOC111477284 isoform X1 [Cucurbita maxima]	[more]
XP_022140535.1	3.3e-43	57.29	uncharacterized protein LOC111011170 [Momordica charantia]	[more]

BLAST of Carg02810 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg02810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IIY0	8.4e-53	87.40	uncharacterized protein LOC111477284 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IHK1	8.4e-53	87.40	uncharacterized protein LOC111477284 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1CFC2	1.6e-43	57.29	uncharacterized protein LOC111011170 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1FN34	7.4e-41	56.77	uncharacterized protein LOC111445763 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1FIS9	7.4e-41	56.77	uncharacterized protein LOC111445763 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Carg02810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G43540.1	2.1e-32	48.82	Protein of unknown function (DUF1350)	[more]
AT3G43540.2	3.8e-21	54.21	Protein of unknown function (DUF1350)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34127:SF3	INITIATION FACTOR 4F SUBUNIT (DUF1350)	coord: 9..117 coord: 117..158
IPR010765	Protein of unknown function DUF1350	PANTHER	PTHR34127	OS04G0405600 PROTEIN	coord: 9..117 coord: 117..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02810-RA	Carg02810-RA	mRNA