Carg02769 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02769
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Non-structural maintenance of chromosomes element 1 homolog
Location	Carg_Chr02: 6949334 .. 6954012 (-)
RNA-Seq Expression	Carg02769
Synteny	Carg02769

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAATTTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTAGCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGGTTTTAATTTCTTTCTCCTTCCCCAGTTTGGTATTCAAGTTGGGAAGTAATGATTTAACGGTATGGAGTCCTGCTCGTTTTTGTCTAACAAATGATGGAGGATGTCTTTCTTAGATCATTTGTAAAAGATGCGTTTGAGTTCTTATAAATTCATGTTCAAAGATTACCGAATATTTGCAATAGAATGGTTTCTGAGTATAATATGGAACCACATATTGGAAGAAATTGCATCAGGGTTCATATCCGTATACGTTTTGGAAATGTGTATTCTTATATCTTTCCTTAATCATTAGCATAAACGATTGAAAAGGAAGAGTGTTTTTAATTGATAATTTGGCCGACGGTTGGAAACTAAGATCTGTTCGATGTTTATTTTGGTGCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTGAGTTATCAACTATGGGAACTATTGGCGTTCTTCAATAAACTGACCATTCTGCCAATTTGCTTAACAATAAACTATGGATACTTAGTGTTTACAATATATGCATCTTTTGTTTTATTGTCGTAGTATTTCTTATAAACAAAAAATTGCGATGTCAGGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGGTTCCTCTTGTTTGTATATGACCAATACTACCGTTTTGAGTTTATTATTGTCAAAGTCAGCTGCATATTTAACTAAGGTTGGCATCTTTGGTCTTTTGCCTTGTAAATAAGACTAATTCCAGTCACCATTTATATAGCGTACTGTGGACAAAGAACTTTTTGGAATGAATTTGTGAGATCCCACATCGTTTAGAGAGAGTAACGAGTGCCAGTGAGGATGTTGGGTCCCGAACGGGGTGGATTGTGAGATCCAACATCGGTTGAAGAGGGGAACGAAACATTATTTATAAGGGTGTGGAAACCTCTCCCTAGCAGACGCTTTTTAAAAACCTTGAGGGAAAGCCGAAAAAGGAAAAGCCAAAGAAGACAATATCTAATAGAGGTGGGCTTGGGCTGGTATAGAGTTCTACAAGAGTATCATTTGATCTTTAGCTTATATCATTTATAGAAAGGTACACTAGTTCTTAAATTATGATTTGATACGAGTCACATTCTTCTTGAATTTAAATACTGCCAATGGAGTGCCAAGAGTTTTCTACATGGTAAAGGCTCGTAACTTACCGACCAAAATTGGATAATGGGACTGTTAGTCCGACAGTGGCATGAATGCCTTTAGAATATATATTGATACATTCACTTCTTTGTGGCCACTTCAATTAAATTCGTCTAGGAGACACTCTCAAGTTTGTTATTTTCCAATACCTGAATTTTTATAATTGTTAAATTTGAGACTAAGAATTTAAGGCCACACTTAAACTCTACACAATTTTGTTGCATTGCTTCTGATTTGCCCCCATTGTGGGTAAAATTGAGAACTGACAAAAGCTTCCAGCTCCTTGTATTACTCTCTTTGTAGGTCTTTTCTGCTTTTTCCCATATCTAAGAATCCTATTGTATAATATTCGTATCATTGTTTAACTGTTACTGTTTTATCACTACCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGTTCTCTTCTTTTATGCCATTTTTGTGATTTACAAAGTCAATTATCATTTTATTTCAATTTTGTGCATTGCATTATTTTCCCCTATGCCCACACTGATAGGAGAAGCTGAACATTTGATGAAAAGGATTTTATGTTGACAGTGCAATTGGTCTGGATTTCAACATGATCCAAACACCGTATCGTTTTTACTCTAAAGAACCTTAACAAACCTTATTTCCTTGATGATTTATATGTTTGCTGGACTTGTTATTCACAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGGTTATATGATGTGGTACCTTCCTAATTTAATCTTTTGATCTGCAAGATCTCTTTTTCTTAACAGTTCTTTAATGGACTATTATTTAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGTAGGCGCTTGAAATGAGGTACGGTTATTTTGATATAGTTTCATGGATCCTAGTCTAGGAGTTGTGAAGTGTGCAGCAACTGCACCTTTTGATGTATTGTGTCAAAATTATCATCATATTCATCTTTAATTGAATTTGTTGTTTTCTCGTACACAGAATTGGAATGTAAAGTGCATTACACAGCGTAAGCCAAAAGTAAGTTTCCTTTTCTTTCTTTTAGTCTCTTGTAAACTATAGCAGTGTTCTCCATTCTTGTCGTCCACACATGCAAGGAACGAGCTGTTCCGTTGTAATGATTTTTTTTTCTTTTTGTACCAAGGATATTTTGCTTGTATTGAGAGTATAAATAGGTTCAATATTCTATAAATATCCCAAATTGCAATCCTTATGTAACAGTAACAGCCCAAGCCTGCTACCAAGTCTACAGGTAGCAGATATTGTCTATTTTGGGTTTTTCCTTTCAAGGTTCCCCTTAAAACGCACTTGCAAGGGAGAGATTTCCACACCCTTATAAAGAATGTTTTGTTTCCCTCTCCAACCGATGTAGGTTCTAATACTTTTTTTTTTCTTTTTATTGTGAGTGAGTGTCCGAGCCAACTTGTGTCACCATAGAAACACAAAAAACTATTTGACCTTGCTAATTTGATTATTGTAGAAACATGTTTGATCTAAATTCTAAGTATATGAGCACCATAGATTGAACTTGTTCTCTCTTATTTCTCCGAGACTCTTTTGGCCACCAAATTAACTCATAATAGTTAACTGTAGCCTCTTTATTTAACAGGAATTATGCTCTGTGGTGTGATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGGTATGCAGCTCAATGCTGAAAATTTGACCGTTCATCATATTTTCTATGTTTAGATTTAAGGATAAATATATCCACTCTAGAGGAGTCATAATTAAGCTGTTTAAATAGTGAACAAATTAGAGCACTCTGGAGAAGTCATAATAGCAGTGACATGAGATAAAAGTGGCGTCTTTGAACTGTTGAGAATAGAATCGATTATGAAACTTTAGATGGTGGGAAAGTGAAGCAATGAAAAGAATATGGCTACATGTTTGTCTTTTTATATAATTAGATTATCTGAATTCATTACAAAAATGTCCCTTTATGAAGCTGACTTGGCTGTGAAAAGAGAGTTTGATCTAATTAGCATCTTGTGAATGACGTTCAATCATCCAACTAAGCTACAGTAGGTGTGTCTAAGTTCACTACTAGTCGATATTGTCTCTTTTGGACTTTTCCTTTTAGGCTTCTTCTCAAAATTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATATTTCTTTGTCCTCTCAACCGACATGGGATCTCACAATCTATTGAGATATGCTAACTTTTATTCTTTTTAGTTCAACAATACATCAAGTGAATTATTTAAACCTTTACTCTCTTGGTTCATGATACATGTTTTATATCAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCCTTTGCCTTGTTTAAACAAGAACAGAATCCAAAGTAAAGTCTCAATTCAAAAGGTATAACCATTTTGCCATTTATTATCTGTTCTATTATTATAAAGTATGAGTAAATATTCGTCCTTCTTCTG

mRNA sequence

CTTCACTTCCTGGAGGTCTTTCAAAATTTTCCCGCACAATTTCTTCTCTTCTATGAGTTTGGCTGAAACTCCCTTACAGAATCAACCTTGTCTGAATCTTTGAGGTATTAGCTGACCTTGAATTAGGGTTCAGAATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGAATTATGCTCTGTGGTGTGATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGAGTGGATGCTTTGATGTCCTAAGGGCACACATGGCCTAAGCTTCTCAGCATTGTGGTTTGTGTCATTTGTACGACCTCTGTTTTTAAGCCTTTGCCTTGTTTAAACAAGAACAGAATCCAAAGTAAAGTCTCAATTCAAAAGGTATAACCATTTTGCCATTTATTATCTGTTCTATTATTATAAAGTATGAGTAAATATTCGTCCTTCTTCTG

Coding sequence (CDS)

ATGCGGGAGCTGAGTTGGAGACATCACACTCTCATTCAAGCGCTTCTCGCTCGCGGCCCACTCAGAGAGGATCACTTCCATTTGCTGTTTACGCGGATCACTGAAAAGAGTCCAGATAATGACCGGCAGCTTTTTAATAATTACCTCCTGACGATGAACAAAGCACTTTCTTTTGCTCAATTTGAGTTGCGAGGCTGCAGAAACCAATATGATGGTCGTGTTTACTATGGCTTGGTCAATAATGTATCCGATGAACAATCCAAACTGGGAACAAAGTATTCAGTTCCACAGATTGCCTTTTATAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGTGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATGCAGGGTCCCAGTCCCATGTCATACCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATCGCGGAGCTTGCTCAGGATCAGTGGCTTAATTGCACCCCTGATGGTTTTGTAAATTTGGGTGTCAGATCATTTCTTGATTTGCGAAGTTGGTTCCGCACTAATGACATACCTTCATGTGAAGTGTGCAATGAAGCTGGAGTGAAGGCAGAGTTGTGTAGTAATGAAGGCTGCACTGTTCGTGTACATCCGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAAGTTGTGGCACTCAATGGCGATCTACAGCACCCAATGTGGAGTTCAAGGAGGAAGAGGATGAGCCAGATGCGCGCATTCAAGGCCAGTCATCATCACATAAGAGGAAGAAAACCAGATTGAACAGAGATATTGATTCAGGACCAAATGGAGACAGTATGGCTGCGGCACAAGCTTCCCAACCTCCTCCAGATACAAGGAGAATAACACGAAGTTCTGCACACCCGCGGAATTATGCTCTGTGGTGTGATGATGAACAGTTAAACATGTATGATGGGTCTGGATTGTGTAAAAAGTTGAATTTTGTTCTTATTAGTGGGCTATGCTCACTAGAGAACGACGAAACATCTGATGGGACGTGA

Protein sequence

MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPPPDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT

Homology

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: KAG7035803.1 (Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 735.7 bits (1898), Expect = 1.9e-208
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT 358
           PDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT
Sbjct: 301 PDTRRITRSSAHPRNYALWCDDEQLNMYDGSGLCKKLNFVLISGLCSLENDETSDGT 357

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_022957637.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata])

HSP 1 Score: 635.6 bits (1638), Expect = 2.6e-178
Identity = 311/314 (99.04%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAHPR
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_022995422.1 (non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 634.0 bits (1634), Expect = 7.7e-178
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_022995424.1 (non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 634.0 bits (1634), Expect = 7.7e-178
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Carg02769 vs. NCBI nr
Match: XP_023533198.1 (non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632.9 bits (1631), Expect = 1.7e-177
Identity = 310/314 (98.73%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRS+AH R
Sbjct: 301 PDTRRITRSTAHQR 314

[Close]

BLAST of Carg02769 vs. ExPASy Swiss-Prot
Match: Q6PAF4 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX=8355 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-10
Identity = 62/282 (21.99%), Postives = 117/282 (41.49%), Query Frame = 0


Query: 8   HHTLIQALLARGPLREDHFHLLFTRITE-KSPDNDRQLFNNYLLTMNKALSFAQFELRGC 67
           H   +QAL++ G +       L     E           ++++  +N+ L      +   
Sbjct: 9   HQRFLQALMSHGIMEGSAVRALHRHCCELHKVHYMHDKLDDFVGVLNRHLQPLFMTIEKG 68

Query: 68  RNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHL 127
             + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L
Sbjct: 69  VGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELIIL--SDNGFATSISILNL 128

Query: 128 QLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNLGVRSF 187
             E Q                  S  +K+K + +L     Q++WL    +G   L  R  
Sbjct: 129 ADELQ------------------SKKMKKKEVEQLLQSFVQEKWL-IGRNGEYTLHTRCI 188

Query: 188 LDLRSWFRT--NDIPS-CEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPS 247
           ++L  + R    D+   C VC +  ++++LC N  C + +H  C  K   + K+   CP+
Sbjct: 189 MELEHYIRNTYQDVAKICNVCRKVAIQSQLCEN--CGIPLHLQCAGKYF-HGKANPTCPN 248

Query: 248 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRD 282
           C   W    P++           ++  Q  SH + +T   R+
Sbjct: 249 CNESWPHEIPDLN----------QVSSQGPSHSQTETVRGRN 256

[Close]

BLAST of Carg02769 vs. ExPASy Swiss-Prot
Match: Q6P881 (Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicalis OX=8364 GN=nsmce1 PE=2 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 6.0e-08
Identity = 59/279 (21.15%), Postives = 113/279 (40.50%), Query Frame = 0


Query: 3   ELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDN-DRQLFNNYLLTMNKALSFAQF 62
           +++  H   +Q L++ G +       L     E    N      ++++  +NK L     
Sbjct: 4   QINESHQRFLQVLMSHGIMESSLVRALHRHCCEVHKVNYMHDNLDDFVGVLNKHLQPLFM 63

Query: 63  ELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNI 122
           ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G    I
Sbjct: 64  KIEKGVGEEDGLTYYALVNRVENDITKMASDYAENELELFRKTMELII--ISENGFAPPI 123

Query: 123 AALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAEL----AQDQWLNCTPDGFVNL 182
           + L+L  E Q                  S  +K+K + +L     QD+WL    +G   L
Sbjct: 124 SILNLADELQ------------------SKKMKKKEVEQLLQSFVQDKWL-IGRNGEYTL 183

Query: 183 GVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSK 242
             R  ++L  +      D+   C VC++  ++ +LC N  C + +H  C   +     + 
Sbjct: 184 HTRCIMELEHYILNTYQDVAKICNVCHKIAIQCQLCEN--CGIPLHLQC-AGIYFRGIAN 243

Query: 243 RACPSCGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKR 274
             CP+C   W    P++          +++  Q  SH +
Sbjct: 244 PLCPNCKESWPHEIPDL----------SQVSSQGPSHSQ 248

[Close]

BLAST of Carg02769 vs. ExPASy TrEMBL
Match: A0A6J1GZN9 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111459112 PE=3 SV=1)

HSP 1 Score: 635.6 bits (1638), Expect = 1.3e-178
Identity = 311/314 (99.04%), Postives = 313/314 (99.68%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSP+NDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPENDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSA+GGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSARGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAHPR
Sbjct: 301 PDTRRITRSSAHPR 314

[Close]

BLAST of Carg02769 vs. ExPASy TrEMBL
Match: A0A6J1JYV1 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.7e-178
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Carg02769 vs. ExPASy TrEMBL
Match: A0A6J1K5P2 (Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111490968 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 3.7e-178
Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180
           IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR
Sbjct: 121 IAALHLQLENQLGDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVR 180

Query: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPSC 240
           SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVH YCLKKMLSNKKSKRACPSC
Sbjct: 181 SFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHRYCLKKMLSNKKSKRACPSC 240

Query: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQPP 300
           GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDS+AAAQASQPP
Sbjct: 241 GTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSVAAAQASQPP 300

Query: 301 PDTRRITRSSAHPR 315
           PDTRRITRSSAH R
Sbjct: 301 PDTRRITRSSAHQR 314

[Close]

BLAST of Carg02769 vs. ExPASy TrEMBL
Match: A0A6J1DLJ6 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.6e-157
Identity = 283/324 (87.35%), Postives = 294/324 (90.74%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPS 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH YCLKKMLSNKKSKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300

Query: 301 PPDTRRITRSSAHPRNYAL-WCDD 323
           PP+TRR+TRSSA   N A+ WC D
Sbjct: 301 PPETRRVTRSSARQSNCAVPWCLD 319

[Close]

BLAST of Carg02769 vs. ExPASy TrEMBL
Match: A0A6J1DI86 (Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021178 PE=3 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 5.2e-156
Identity = 279/316 (88.29%), Postives = 290/316 (91.77%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQ
Sbjct: 1   MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQ 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN
Sbjct: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120

Query: 121 IAALHLQLENQLGDAGSQ-SHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
           IAALHLQLENQLGD GSQ S VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV
Sbjct: 121 IAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPS 240
           RSFLDLRSWFRTNDIPSCEVCNEAGVKAELC NEGCTVRVH YCLKKMLSNKKSKRACP 
Sbjct: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPG 240

Query: 241 CGTQWRSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQP 300
           CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Sbjct: 241 CGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP 300

Query: 301 PPDTRRITRSSAHPRN 316
           PP+TRR+TRSSA  R+
Sbjct: 301 PPETRRVTRSSARQRD 311

[Close]

BLAST of Carg02769 vs. TAIR 10
Match: AT5G21140.1 (embryo defective 1379 )

HSP 1 Score: 344.0 bits (881), Expect = 1.5e-94
Identity = 175/316 (55.38%), Postives = 227/316 (71.84%), Query Frame = 0


Query: 1   MRELSWRHHTLIQALLARGPLREDHFHLLFTRITEKSPDNDRQLFNNYLLTMNKALSFAQ 60
           M  LSW+HHTLIQAL++RGPL+E  FH +FT +T ++P   +++F+ YLL +NK LS+  
Sbjct: 1   MASLSWKHHTLIQALISRGPLKEKEFHSIFTAVTGRNPVTVKKIFDKYLLEINKELSYVH 60

Query: 61  FELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISN 120
           FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF+K I+EAIAQD +AQG IS+
Sbjct: 61  FELKACRDQYDGQVCYGVVNNVADDQSKLGTKYSVPQIAFFKGIIEAIAQDEAAQGCISS 120

Query: 121 IAALHLQLENQL-GDAGSQSHVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGV 180
             AL+++LENQ+  +A S    +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+
Sbjct: 121 FDALNIRLENQISSEASSSQQQVPPAFKNFSMTQKEKTLDELVRDKWLCRTRERNIGLGI 180

Query: 181 RSFLDLRSWFRTNDIPSCEVCNEAGVKAELCSNEGCTVRVHPYCLKKMLSNKKSKRACPS 240
           RS LDLRSWFR ND+PSCEVCNEAGVKA+LC  EGC VR+H YCLKK+LS +  KR C  
Sbjct: 181 RSLLDLRSWFRNNDVPSCEVCNEAGVKADLCPTEGCPVRIHKYCLKKLLSQRDDKR-CSG 240

Query: 241 CGTQW-RSTAPNVEFKEEEDEPDARIQGQSSSHKRKKTRLNRDIDSGPNGDSMAAAQASQ 300
           CG  W  S     E  EE    +   + Q+++ K K+ R  R  DS  NG S A+  AS 
Sbjct: 241 CGKPWPLSKITKTEAAEEAMNDEEESETQATAPKAKRRRQQR--DSTENGSSQASL-AST 300

Query: 301 PPPDTRRITRSSAHPR 315
              +TRR+TRS  H R
Sbjct: 301 SGANTRRVTRSVGHSR 312

The following BLAST results are available for this feature:

BLAST of Carg02769 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035803.1	1.9e-208	100.00	Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argy...	[more]
XP_022957637.1	2.6e-178	99.04	non-structural maintenance of chromosomes element 1 homolog [Cucurbita moschata]	[more]
XP_022995422.1	7.7e-178	99.04	non-structural maintenance of chromosomes element 1 homolog isoform X1 [Cucurbit...	[more]
XP_022995424.1	7.7e-178	99.04	non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbit...	[more]
XP_023533198.1	1.7e-177	98.73	non-structural maintenance of chromosomes element 1 homolog [Cucurbita pepo subs...	[more]

BLAST of Carg02769 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6PAF4	2.2e-10	21.99	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus laevis OX...	[more]
Q6P881	6.0e-08	21.15	Non-structural maintenance of chromosomes element 1 homolog OS=Xenopus tropicali...	[more]

BLAST of Carg02769 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZN9	1.3e-178	99.04	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita moschat...	[more]
A0A6J1JYV1	3.7e-178	99.04	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1K5P2	3.7e-178	99.04	Non-structural maintenance of chromosomes element 1 homolog OS=Cucurbita maxima ...	[more]
A0A6J1DLJ6	1.6e-157	87.35	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]
A0A6J1DI86	5.2e-156	88.29	Non-structural maintenance of chromosomes element 1 homolog OS=Momordica charant...	[more]

BLAST of Carg02769 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21140.1	1.5e-94	55.38	embryo defective 1379	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 196..254 e-value: 4.2E-11 score: 44.2
IPR011513	Non-structural maintenance of chromosomes element 1	PFAM	PF07574	SMC_Nse1	coord: 8..185 e-value: 1.3E-41 score: 142.6
IPR011513	Non-structural maintenance of chromosomes element 1	PANTHER	PTHR20973	NON-SMC ELEMENT 1-RELATED	coord: 1..312
IPR014857	Zinc finger, RING-like	PFAM	PF08746	zf-RING-like	coord: 197..240 e-value: 6.7E-9 score: 35.9
IPR014857	Zinc finger, RING-like	CDD	cd16493	RING-CH-C4HC3_NSE1	coord: 196..242 e-value: 4.70593E-13 score: 60.9065
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 84..193 e-value: 3.5E-17 score: 64.3
None	No IPR available	GENE3D	3.90.1150.220		coord: 5..81 e-value: 4.8E-13 score: 51.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..309
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 290..305
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..268
None	No IPR available	PANTHER	PTHR20973:SF1	BNAANNG27900D PROTEIN	coord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02769-RA	Carg02769-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
cellular_component	GO:0005634	nucleus
cellular_component	GO:0030915	Smc5-Smc6 complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016740	transferase activity