Carg02763 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02763
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	oligoribonuclease
Location	Carg_Chr02: 6977953 .. 6984242 (+)
RNA-Seq Expression	Carg02763
Synteny	Carg02763

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGATGGGGGAAGAAGAGAAGGCAAATTAGAGGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGTTGATTTAGTTATGATGCGATTTAGGGTGTTCTTCTCGTTATCAAGTGTCACATTTTACAGGTGCAAGGTTGAAGGTTCTGAGAACTTCAGGAGTTCGATTAGATTAGATTACCTTCCCCGTTGGTCGCTTAGAGTGCATTAAGAATTAGGTTCAGGTAGTTTCTTCGGAAAATTGAAGTGATTCAATAAGAATCGATTGTTCTGTTTGCCCAGTTTTGAGTTCCGCGGCATTGTGGACATTAACAAGGCTGAAGATTTGATTCTATCTTCGACTTCTGAATCTAAGCTGCCAATTTGAGCTTTCAACTCAATACTAATTGAAAAAATTGGCTTTTAGGAAACGATGTAGCTTTACGATCAGGCTTTTCATTGTCACTTGTTGTGTACTTGCTGTAGATTGTCCCCGAGACCCCACGACATGGTAATTGTGGGTTTCGTTACTTCCTGGTTTTACGCAATGCATTACATGGTAGCTTCGTTCAATTTCAAGCTTGGAATGATGCTATTGTTTTGCAATTTGATATGTTAAGTTTTACCCTTATGTCTCTGATGAAATTGTTCGCTTCATCTCAAAGGAAAATCTGTAGCGACTTCGTTTTTTTGGGTCAGTATTTTACTGCGATTATTCCTTGTAGATCCCCCACGACAGACATGGATATTTCATCGATATTGCGCACTTAATATGTAGTTATTTTTCTTGATTTTTCTCCCTGTTGGTTTTTTACTGAATTAATCTTTCAAGCAATATATATTGTAGTAATCCATCCTCTTAGTATGGATATTACCATTGACATTCATGCATAGTGAATAGGATACAGTTCTTTTAAGTGTGGTTCACGGTTGTGGGTATTTATTTTTCTATTGTAAATTTCTCCCATCTACATGACCCTGTGGTGTGGTTTGATTAATTGAATCAGGAAAAAGCAAGAAGGAAGTTAACATCTCTGGTGATATTCTGATGGGAGATAGACAGAAACAAAGTCAACCAGATGCAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTAACTAACAATTATTAACTAGCCCATATGCTTTGAGCTTTTAAAACGTGGATCCAAGAGTGGGAGTAGATTATAGCTATGAGAAGACCCCTTGTTTTGGGGTTTTATCATTAAATATTGAAATCAAGTCCAACGGAATTTTAAAAATTTATATTTGCTCGAGGTTGAATGGACTGGATACTCAACATATTACCTATAATTTTTTTTTTCTGTAACTCTTTAATGGAAGTGTTTGCTCCTTACTATTCTTTTGTCTTCTTCTGTGGCAATGATGACTTATTTTTCTGTAACTTTCTCCACACACACCCGAAAAAGGAAAAAAAAATAAAAAAAAATGAAAAAGAAACTATAACCCTTCTAGCTTCCTCAAAACATATATCCTATGGTTTCTCTTTATGGAAATAAGAATATATCCTATGGTTTTTCTTTATTGAGAAGATAGATTCTATAAGTTTAAGTGAAGGCCAAGACAGGCTGGGGTGGGGGATTAATCCCATGGGAGACGTCACCACCAGATCGACTTTTCTCCATATTGCAAAGGAAAGTCACAGACTGAAAGCTCATATGGTGAGAAAACACGGTTGAAAAGCTCTAGAGATAGTTCCCAAATTGATCTCTGCCCCCTTGGGTTGTAGCTATTGTCTAAAACAGATGGAATCCATATATCATATTTTCCTTCACAACCCATATGCTTCTAATGGTTGGATTTGGTTGTTGGGAGAGTTTGGTTTGTCCTACTGCTTATTGAACAGAGATGATGATTGGCTGGTAGAATGTTTGACTGGTAGTTGTTTTAAGAACCGGGCTAATATTTTGTGGCAATTTGCAGTTAGAGCCTTTGTCTTGCTGCTGTGGTTATATCATAGGGTTGTTATAACTTCGACCTAAATTTTTGAAGTATATTCTGTGATGTCAATGAAGATGTGAGGTTGGTAGTTAAATCTTTAAGGTTGGTTTTTCTGTGCATGCCACTCTCACGGCTTTGGAGCAAAAGAAGTTGCAATCATAAAAATTTTCAAACAATGTTTTCATAATCTGAATTTATATTTTCCGTACAAGTTTTTCTCAATTAGGGGAAGTTCTGTTTTGAGTCGAACTAAATTCATGCTCCTATTTTTCTATAATTCCTTTTTTTTTTTACATCCTAAATAAATGAGAGTCCCACGTTCTTAGCGATGTGGAAGCCAAAATTCTTGTTAGACTAGAGTTTGACACTATTTGCCATTCCGTGCAACATCTCTTTGGCTAGAAAAGAAGGCCTAATCATTGTTGGTTGATAATATCCTGGCTATTTGAAAAGATGACGAGAGCAGCCTATAAAACATTTGGGATGGGGAATTAAAGATTAATGCCTCTAACAGGGCTTTCTTTCCAAAGAATTTTAAAACTGTCCATTTGTGTGTGCTAATGTGACTGTTGAGATCTGTTTCCAATCTCTTTTTTGCATTCTTCTCCTTAGAATTTTTATCCTCCACACTTTTGTACTTGTTTTTTATGTCGATACCTTCCTTTACTTAATTAAGATGCTGAACTCATAATTTCTAATGGTATATTTTCTCTGTTTGACTTACTATGCAGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGTATCTTTTGCTATTGGTTATTCAATTGTGTTTTCCATGAATGCATTTGCCCCCGTTTGTTTGTGCATTTGTGTCATCTTATTTATGTTTGTCAATAATTTCCTTTCATCAATGAAGTAACAAAAGAAACACAATATTTTCCGGTAAGATCGAACAAAATACAATGCAGTTTTGACAAGAAACCTGACTCAATATATCAGCGTCAGTCTTTGCAAATGCCTAAAACAAACAAGAGAAGTTCAAAAGTTGCAACCTTAGTCTCATCGCTTCTTTTTGTTTCGTTTTCTATTTTATGTTTTCAGGGTCCTCATTTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGTAAGAACCAACAAGCTTAATCAATATACCACTTCATTGTATATTCATGGCTTATGGCTTTCTGCCTTACTTTTTTTCTTGTGGATGACACAAATTATTATATAACACTGTCGTTATTCAGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTGCGTAAAAATTTATCTAATGCTAGGCTCCTCCCCTCTTGATGCATTTTTTTTTTTTTTTATTCGTATCCTTAATTCATTAATTTAAGTCATTTGATGTACGTATTATTGTGATAAATTTTGCGGTGCCTTGCGGCCACACACAAAAAATAATCATAAATACAGATAGGTCAAGAATCCTGCAACGATTGAACTTGGTAACTTATAATCATAAATAACATAAAAAAATAAGCGTTTCTTGTCTATAATCTAGTTTTAATGATAATGACAACGTTAATTTGAATCTTTATTTCATCTTCTTCATAATACCATCATCTCCCAGACCTTATGTTTGAAGGTCTTACTTCATGTTTAATCACAGATGCACATTAGTTGTACAAGGGAGGGAAAGCACCCCACAACCAGGCGGTTATTAGAAGGCTTCCCACTAGGTAATTATAGAGGGAAAAAAGTTTGACCAGCTGCCTCAAAATAATAATAATAAATAAATAAAATACAAGAGTGAGCAAAAATGCTTGGATCCTATAGCTCATCCCTTAGCGTATCATTCCTTTGGATTACTACTTTATTTTCTCAATCCAAAGATTTCTAAGAATTATACAGACGCCACCCATGCTCTCATTTTAAAATTATGAAAGAGGAAGAGTAGACTGATGAAGTCTTCCTTTATGAGAAACCATCTATCATTACTGACTGACAATCCATACATCCTTGATGGTTTTGTTTTTACGGTGAAGAAAATCCATCAATTTCTGCAACATAGCTGCTAGGGAAACAATTCCATCCAGCAATCCTCCGAAACCAGATCATAGAGCCATGTCCAGTAGACATTTTTTCTAAGGATATAGTTGAATGATCTTGGTTGAAATCAGAGCGAACGGCTTTTGAAAGATCTGTAACTATACTTTTTAGTGATTACCAACAATATCACAAATGTGTATGTAATCTGGTTAATATCTTCTTTTTTTTTTTGCTCAAATTTTATGCAATGACATTTGTAATTTGCAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTGTATGTGGATTTTATTTTTTTGAAGGTAGTCCCACAGCAATATTCTTTATTTTCTCACAATTTAACGTAATTGTATCTTTGGTTTGAATTAATTTATTGTGTTATATAAAGTAAACGTCTGAGTTTAGTCAATATGTCGATATACATTTTTATATAATTTATTTATGCACTCAACTGTTTCTTGTCTTTTTGGGGCTTGCATTTGATGCTTTCTCCTGGGTTATCTGTTCTTTAGAATCTTTTTGTTGCTTTCACTGTCCTAAATAATGGTCGTGTTATCTTGAAAATGAAAATTGTTTATTATTTAATATTCAATGATATCTTCACTTTAGTAAGTTTTACATGTGTGATATGTCTAATTTATTTGCATTATTGAATAAGCTTAATGGTTTTCGTTGATATGTGGTTATATTTTCCACCCCTTTTGAGAACAAATACTGGTTTGCAATGTCTTTCGTCCTAACGACCTGTTTTATTCCCTTCAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGCGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGGTAAAGATGTTGATGGGTTTAGAGCAAAATGACAAGCATGCTGTTCTTAATTCTCTGTTTCATATTAAAAATAAGAAACACATTATTTCCTTGCACTTGTTCGTCTGTAATTGCAGACCTCGACCAGTATTGTTGTTCAAATTAGAAACCCTTTGTGTCAATTCCGACTAAATTGATCACGTTACTTATTGTCTCATGGGATTCCGAGTTAAGAGCCGTCTAATATCATCTCTGAAAGATATTTAGGAGGCTTGTTAGATTTTAGTGGCATTACACTCTTCGATCAAACTTTTACCTGATTCATAGGACGATTGTGCCAACTTGAGAATAGAACTGACAAAATATATTTGATCACGGGGTCAGAAGTTTGAATCTCCCATCCTACATTTTTTCTGAAAAGAAAACAGGAACAATCGTTTTGAGAATTTCTAATGGAAATCTCGCAGCTGCTTATGATGTCCTAGGAATCTGTAGCCTTTTTGTAGACTGTTGATCAATAAAACCAAACATAGACTCACCTTGCAACATTTGGTTATTGAATTACTTGAGCGTACATGAACAACTCATTTCCTTTCCAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGAGGCACCACAACCACAAGTCTACATGTCTGTACGGTACGCGGAGGTTTTACTTTAAAATTCCAATCCACCATTCATCTCCTTGTTCAATTGTATATGGTGAAAGCTCTTTAGCTGAAACAGTTATCTGAATCTATCTATTTATTTGAGTGTAGTTGCTGGATTCATTGCTTGGAGAACCTTGATGGTATCAAATATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCAAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTTATCTTTTATCTATTTGAAATGGTCATTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTGGTTAAAAAAACGAATAGCATGAATGGTCAGGTTGCTGTTTT

mRNA sequence

AGGATGGGGGAAGAAGAGAAGGCAAATTAGAGGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAGTTAACATCTCTGGTGATATTCTGATGGGAGATAGACAGAAACAAAGTCAACCAGATGCAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATTTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTGTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGCGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGAGGCACCACAACCACAAGTCTACATGTCTGTACGTTGCTGGATTCATTGCTTGGAGAACCTTGATGGTATCAAATATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCAAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTTATCTTTTATCTATTTGAAATGGTCATTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTGGTTAAAAAAACGAATAGCATGAATGGTCAGGTTGCTGTTTT

Coding sequence (CDS)

ATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAGTTAACATCTCTGGTGATATTCTGATGGGAGATAGACAGAAACAAAGTCAACCAGATGCAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATTTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTGTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGCGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGA

Protein sequence

MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQSQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKKPKK

Homology

[Close]

BLAST of Carg02763 vs. NCBI nr
Match: XP_022957669.1 (oligoribonuclease [Cucurbita moschata] >KAG6605859.1 Oligoribonuclease, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035809.1 Oligoribonuclease [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 499.6 bits (1285), Expect = 1.6e-137
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 252
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Carg02763 vs. NCBI nr
Match: XP_023533182.1 (oligoribonuclease [Cucurbita pepo subsp. pepo] >XP_023533183.1 oligoribonuclease [Cucurbita pepo subsp. pepo] >XP_023533185.1 oligoribonuclease [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.3 bits (1261), Expect = 9.6e-135
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE NISGDILMG+RQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPD AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 252
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 250

[Close]

BLAST of Carg02763 vs. NCBI nr
Match: XP_022996309.1 (oligoribonuclease [Cucurbita maxima])

HSP 1 Score: 488.8 bits (1257), Expect = 2.8e-134
Identity = 245/251 (97.61%), Postives = 247/251 (98.41%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           MEPFVNAFSVLELDAEDDQV PPSTFSKDE AASSSSRTGKSKKEVNISGDILMG+RQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVCPPSTFSKDEGAASSSSRTGKSKKEVNISGDILMGERQKQ 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPD AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVI+FVKKHVGSYTLHLAGNSVYVDF 
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIDFVKKHVGSYTLHLAGNSVYVDFT 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 252
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Carg02763 vs. NCBI nr
Match: XP_038902868.1 (oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclease isoform X1 [Benincasa hispida])

HSP 1 Score: 451.8 bits (1161), Expect = 3.8e-123
Identity = 227/251 (90.44%), Postives = 237/251 (94.42%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           M+P VNAFSVLELDAEDDQ+   ST SKD+A ASS SRTGKSKKEVNISGDIL G++QKQ
Sbjct: 3   MKPLVNAFSVLELDAEDDQIPALSTSSKDDATASSPSRTGKSKKEVNISGDILTGEKQKQ 62

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
            QPD AAE+YKFPLVWIDLEMTGL+VETDRILEIACIITNGSLTKLVEGP LVIHQSKEC
Sbjct: 63  GQPDVAAENYKFPLVWIDLEMTGLHVETDRILEIACIITNGSLTKLVEGPDLVIHQSKEC 122

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSY LHLAGNSVY+DFI
Sbjct: 123 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFI 182

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRW+PRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 183 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKY 242

Query: 241 YKENIFKKPKK 252
           YK+NIFK  KK
Sbjct: 243 YKDNIFKNSKK 253

[Close]

BLAST of Carg02763 vs. NCBI nr
Match: XP_008449845.1 (PREDICTED: oligoribonuclease [Cucumis melo] >XP_008449846.1 PREDICTED: oligoribonuclease [Cucumis melo] >XP_016900790.1 PREDICTED: oligoribonuclease [Cucumis melo])

HSP 1 Score: 426.4 bits (1095), Expect = 1.7e-115
Identity = 217/250 (86.80%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 2   EPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQS 61
           +P VNAFSVLELDAEDDQ+   ST SKD+A  S SS TGKSKKEVNISGDI  G+RQKQ 
Sbjct: 4   KPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQG 63

Query: 62  QPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 121
           QP+A AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKECL
Sbjct: 64  QPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECL 123

Query: 122 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 181
           EKMGEWCQSHHAASGLTKKV +STISEREAEKQVIEFVKKHV    LHLAGNSVY+DFIF
Sbjct: 124 EKMGEWCQSHHAASGLTKKVQRSTISEREAEKQVIEFVKKHVCCDKLHLAGNSVYMDFIF 183

Query: 182 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 241
           LKKYMPDLAGLFSHVLVDVSSVK LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKYY
Sbjct: 184 LKKYMPDLAGLFSHVLVDVSSVKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYY 243

Query: 242 KENIFKKPKK 252
           KENIFK  KK
Sbjct: 244 KENIFKNSKK 253

[Close]

BLAST of Carg02763 vs. ExPASy Swiss-Prot
Match: Q9ZVE0 (Oligoribonuclease OS=Arabidopsis thaliana OX=3702 GN=At2g26970 PE=2 SV=2)

HSP 1 Score: 296.2 bits (757), Expect = 3.5e-79
Identity = 158/247 (63.97%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           M    NAFSVL              F+ ++A  +SSS TGK ++ VN  G +  G     
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSSTGKQEESVN--GSLEDG----- 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
                   DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+C
Sbjct: 61  --------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L+KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+
Sbjct: 121 LDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFL 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKY
Sbjct: 181 FLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKY 219

Query: 241 YKENIFK 248
           YK+ IFK
Sbjct: 241 YKKTIFK 219

[Close]

BLAST of Carg02763 vs. ExPASy Swiss-Prot
Match: Q9Y3B8 (Oligoribonuclease, mitochondrial OS=Homo sapiens OX=9606 GN=REXO2 PE=1 SV=3)

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-47
Identity = 91/184 (49.46%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 65  AAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKM 124
           AA E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M
Sbjct: 34  AAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSM 93

Query: 125 GEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKK 184
            +WC+ HH  SGLTK V +STI+ ++AE + + FV++        LAGNSV+ D  FL K
Sbjct: 94  SDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDK 153

Query: 185 YMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKEN 244
           YMP       + ++DVS+VK LC RW+P + + AP K   HRA+DDI ESI EL++Y+ N
Sbjct: 154 YMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNN 213

Query: 245 IFKK 249
           IFKK
Sbjct: 214 IFKK 217

[Close]

BLAST of Carg02763 vs. ExPASy Swiss-Prot
Match: Q9D8S4 (Oligoribonuclease, mitochondrial OS=Mus musculus OX=10090 GN=Rexo2 PE=1 SV=2)

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-47
Identity = 90/184 (48.91%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 65  AAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKM 124
           AA E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M
Sbjct: 34  AAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSM 93

Query: 125 GEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKK 184
            +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL K
Sbjct: 94  SDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDK 153

Query: 185 YMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKEN 244
           +MP       + ++DVS+VK LC RW+P D + AP K   HRA+DDI ESI EL++Y+ N
Sbjct: 154 HMPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNN 213

Query: 245 IFKK 249
           IFKK
Sbjct: 214 IFKK 217

[Close]

BLAST of Carg02763 vs. ExPASy Swiss-Prot
Match: Q5U1X1 (Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.8e-47
Identity = 90/184 (48.91%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 65  AAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKM 124
           AA E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M
Sbjct: 34  AAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSM 93

Query: 125 GEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKK 184
            +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL K
Sbjct: 94  SDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDK 153

Query: 185 YMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKEN 244
           +MP       + ++DVS+VK LC RW+P D + AP K   HRA+DDI ESI EL++Y+ N
Sbjct: 154 HMPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNN 213

Query: 245 IFKK 249
           IFKK
Sbjct: 214 IFKK 217

[Close]

BLAST of Carg02763 vs. ExPASy Swiss-Prot
Match: A2VE52 (Oligoribonuclease, mitochondrial OS=Bos taurus OX=9913 GN=REXO2 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.0e-46
Identity = 90/184 (48.91%), Postives = 125/184 (67.93%), Query Frame = 0


Query: 65  AAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKM 124
           AA E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M
Sbjct: 34  AAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSM 93

Query: 125 GEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKK 184
            +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL K
Sbjct: 94  SDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDK 153

Query: 185 YMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKEN 244
           YMP       + ++DVS+VK LC RW+P + + AP K   HRA+DDI ESI EL++Y+ N
Sbjct: 154 YMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNN 213

Query: 245 IFKK 249
           IFKK
Sbjct: 214 IFKK 217

[Close]

BLAST of Carg02763 vs. ExPASy TrEMBL
Match: A0A6J1H2M6 (oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1)

HSP 1 Score: 499.6 bits (1285), Expect = 7.7e-138
Identity = 251/251 (100.00%), Postives = 251/251 (100.00%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 252
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Carg02763 vs. ExPASy TrEMBL
Match: A0A6J1K8C8 (oligoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111491575 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134
Identity = 245/251 (97.61%), Postives = 247/251 (98.41%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           MEPFVNAFSVLELDAEDDQV PPSTFSKDE AASSSSRTGKSKKEVNISGDILMG+RQKQ
Sbjct: 1   MEPFVNAFSVLELDAEDDQVCPPSTFSKDEGAASSSSRTGKSKKEVNISGDILMGERQKQ 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           SQPD AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC
Sbjct: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVI+FVKKHVGSYTLHLAGNSVYVDF 
Sbjct: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIDFVKKHVGSYTLHLAGNSVYVDFT 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 252
           YKENIFKKPKK
Sbjct: 241 YKENIFKKPKK 251

[Close]

BLAST of Carg02763 vs. ExPASy TrEMBL
Match: A0A1S3BNX4 (oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 8.3e-116
Identity = 217/250 (86.80%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 2   EPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQS 61
           +P VNAFSVLELDAEDDQ+   ST SKD+A  S SS TGKSKKEVNISGDI  G+RQKQ 
Sbjct: 4   KPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQG 63

Query: 62  QPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 121
           QP+A AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKECL
Sbjct: 64  QPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECL 123

Query: 122 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 181
           EKMGEWCQSHHAASGLTKKV +STISEREAEKQVIEFVKKHV    LHLAGNSVY+DFIF
Sbjct: 124 EKMGEWCQSHHAASGLTKKVQRSTISEREAEKQVIEFVKKHVCCDKLHLAGNSVYMDFIF 183

Query: 182 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 241
           LKKYMPDLAGLFSHVLVDVSSVK LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKYY
Sbjct: 184 LKKYMPDLAGLFSHVLVDVSSVKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYY 243

Query: 242 KENIFKKPKK 252
           KENIFK  KK
Sbjct: 244 KENIFKNSKK 253

[Close]

BLAST of Carg02763 vs. ExPASy TrEMBL
Match: A0A0A0KZ28 (Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830 PE=3 SV=1)

HSP 1 Score: 426.0 bits (1094), Expect = 1.1e-115
Identity = 214/251 (85.26%), Postives = 229/251 (91.24%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKEVNISGDIL G+RQKQ
Sbjct: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
            QP+A AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKEC
Sbjct: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV +  LHLAGNSVY+DFI
Sbjct: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSS+K LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKY
Sbjct: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242

Query: 241 YKENIFKKPKK 252
           YKENIFK  KK
Sbjct: 243 YKENIFKNSKK 253

[Close]

BLAST of Carg02763 vs. ExPASy TrEMBL
Match: A0A6J1DKA2 (oligoribonuclease isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021263 PE=3 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.4e-115
Identity = 217/251 (86.45%), Postives = 230/251 (91.63%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           M+  VNAFSVLELDAEDDQ+   STFSK +A ASSSS+TGKSKKEV+ISGDI  G+RQKQ
Sbjct: 1   MQSLVNAFSVLELDAEDDQIPALSTFSKPDATASSSSKTGKSKKEVDISGDIPTGERQKQ 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
           S  D AAEDYK PLVWIDLEMTGLNVETDRILEIACI+TNG+LTKL EGP LVIHQSKEC
Sbjct: 61  SLLDVAAEDYKLPLVWIDLEMTGLNVETDRILEIACIVTNGNLTKLAEGPDLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           LEKMGEWCQ+HHAASGLTKKVL+STISEREAEKQVIEFVKK+VGSYT  LAGNSVY DFI
Sbjct: 121 LEKMGEWCQTHHAASGLTKKVLRSTISEREAEKQVIEFVKKYVGSYTPLLAGNSVYTDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSSVKALC RW+P+DQKKAP KENKHRAMDDIRESIMELKY
Sbjct: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCCRWYPKDQKKAPHKENKHRAMDDIRESIMELKY 240

Query: 241 YKENIFKKPKK 252
           YKENIFKK KK
Sbjct: 241 YKENIFKKSKK 251

[Close]

BLAST of Carg02763 vs. TAIR 10
Match: AT2G26970.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 296.2 bits (757), Expect = 2.5e-80
Identity = 158/247 (63.97%), Postives = 183/247 (74.09%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           M    NAFSVL              F+ ++A  +SSS TGK ++ VN  G +  G     
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSSTGKQEESVN--GSLEDG----- 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
                   DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+C
Sbjct: 61  --------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L+KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+
Sbjct: 121 LDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFL 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKY
Sbjct: 181 FLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKY 219

Query: 241 YKENIFK 248
           YK+ IFK
Sbjct: 241 YKKTIFK 219

[Close]

BLAST of Carg02763 vs. TAIR 10
Match: AT2G26970.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 288.5 bits (737), Expect = 5.2e-78
Identity = 154/247 (62.35%), Postives = 180/247 (72.87%), Query Frame = 0


Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKEVNISGDILMGDRQKQ 60
           M    NAFSVL              F+ ++A  +SSS T       +++G +  G     
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSST------ESVNGSLEDG----- 60

Query: 61  SQPDAAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
                   DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+C
Sbjct: 61  --------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L+KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+
Sbjct: 121 LDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFL 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKY
Sbjct: 181 FLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKY 215

Query: 241 YKENIFK 248
           YK+ IFK
Sbjct: 241 YKKTIFK 215

The following BLAST results are available for this feature:

BLAST of Carg02763 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957669.1	1.6e-137	100.00	oligoribonuclease [Cucurbita moschata] >KAG6605859.1 Oligoribonuclease, partial ...	[more]
XP_023533182.1	9.6e-135	98.80	oligoribonuclease [Cucurbita pepo subsp. pepo] >XP_023533183.1 oligoribonuclease...	[more]
XP_022996309.1	2.8e-134	97.61	oligoribonuclease [Cucurbita maxima]	[more]
XP_038902868.1	3.8e-123	90.44	oligoribonuclease isoform X1 [Benincasa hispida] >XP_038902870.1 oligoribonuclea...	[more]
XP_008449845.1	1.7e-115	86.80	PREDICTED: oligoribonuclease [Cucumis melo] >XP_008449846.1 PREDICTED: oligoribo...	[more]

BLAST of Carg02763 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVE0	3.5e-79	63.97	Oligoribonuclease OS=Arabidopsis thaliana OX=3702 GN=At2g26970 PE=2 SV=2	[more]
Q9Y3B8	7.8e-47	49.46	Oligoribonuclease, mitochondrial OS=Homo sapiens OX=9606 GN=REXO2 PE=1 SV=3	[more]
Q9D8S4	7.8e-47	48.91	Oligoribonuclease, mitochondrial OS=Mus musculus OX=10090 GN=Rexo2 PE=1 SV=2	[more]
Q5U1X1	7.8e-47	48.91	Oligoribonuclease, mitochondrial OS=Rattus norvegicus OX=10116 GN=Rexo2 PE=2 SV=...	[more]
A2VE52	1.0e-46	48.91	Oligoribonuclease, mitochondrial OS=Bos taurus OX=9913 GN=REXO2 PE=2 SV=1	[more]

BLAST of Carg02763 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2M6	7.7e-138	100.00	oligoribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111459134 PE=3 SV=1	[more]
A0A6J1K8C8	1.4e-134	97.61	oligoribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111491575 PE=3 SV=1	[more]
A0A1S3BNX4	8.3e-116	86.80	oligoribonuclease OS=Cucumis melo OX=3656 GN=LOC103491603 PE=3 SV=1	[more]
A0A0A0KZ28	1.1e-115	85.26	Exonuclease domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G279830...	[more]
A0A6J1DKA2	1.4e-115	86.45	oligoribonuclease isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021263 PE=3...	[more]

BLAST of Carg02763 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26970.1	2.5e-80	63.97	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G26970.2	5.2e-78	62.35	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 73..247 e-value: 4.0E-27 score: 106.1
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 75..236 e-value: 6.1E-32 score: 111.4
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 66..250 e-value: 1.8E-72 score: 244.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..60
None	No IPR available	PANTHER	PTHR11046:SF18	OLIGORIBONUCLEASE-LIKE	coord: 1..250
IPR022894	Oligoribonuclease	PANTHER	PTHR11046	OLIGORIBONUCLEASE, MITOCHONDRIAL	coord: 1..250
IPR022894	Oligoribonuclease	CDD	cd06135	Orn	coord: 74..246 e-value: 2.5926E-103 score: 295.224
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 72..247

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02763-RA	Carg02763-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0000175	3'-5'-exoribonuclease activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding