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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCGTTGATTTCGATGCGGAATGTTCTACAAAAACATACCCCAGGTTATAATCCAACAGATTATGGTGAATACCCAATGTTTGTCGTAGCGCACCGTCCTCCGACTGGTCGGCAGTTCCCCTCTTCCTATACTGGTTTTGAAGGTACTGGTTGATACTTCATTGCCGATTTTCTTAATATTCATACATTTTTATTGTCATTTTCAGTAGATTTTTTACTCGAGCTGGGAATGGCGGGGATTGGAGGTGTTATTGTGAACTGCTGCGATTTCTGTTCCTGTTGCATCGAGGTTCATGATGCTTGTTGTAATAGTAGTTTGCTGCCTTTCCCATGCCATGGAGCGGCAGATATTGGGGGTTCTCTGTTTATTTGTGGGGATTAAGGTTTTTATCGTTTTATTTCATCAGGGTTTTCTTCAGTTGTAGGAAATTCGATCTCGTTGGTTGGGTCGTTTGTTGTTCTGTATTCTACTCTCATTTGTGCTTATGGGTTAATGTTTGGTAATTAGTGGTTAGCTACTTGCTTACATATGAATTTGTTCGTTGTTTGTATCTGCTTGTTTTGGTTTAGGGTCTCTTCCTGTTATAATTCTGTGTAAGAAGTGATTGTGATCTTGATAGGAATGTTATTAGGATAGAATTAGGGATGTTTTTGGGGTATTAAAGGTATGTTAGTAATTAGGTAATGAGTTGCTTGGGATAGAATTATTTAGATGTTTTTGACTTGGACTGAGAGTATGTTAGTAATCTTTTGTATTTCAATATCATTTTGGTTCTGTTTGGTTCGATCTTGTACTCGTTCTTTTCCATATGCAACGAGCACGACTCTGATGTACTGTCGATATCTTGCAGTCTTTATTGAATTTTGTTCTCTCTTGGTGGCATTTCATCGTAATTTTGACAGGCCGGTAAACTAAACTGCTGA mRNA sequence ATGGCGTTGATTTCGATGCGGAATGTTCTACAAAAACATACCCCAGGTTATAATCCAACAGATTATGGTGAATACCCAATGTTTGTCGTAGCGCACCGTCCTCCGACTGTAGATTTTTTACTCGAGCTGGGAATGGCGGGGATTGGAGGTGTTATTGTGAACTGCTGCGATTTCTGTTCCTGTTGCATCGAGGCCGGTAAACTAAACTGCTGA Coding sequence (CDS) ATGGCGTTGATTTCGATGCGGAATGTTCTACAAAAACATACCCCAGGTTATAATCCAACAGATTATGGTGAATACCCAATGTTTGTCGTAGCGCACCGTCCTCCGACTGTAGATTTTTTACTCGAGCTGGGAATGGCGGGGATTGGAGGTGTTATTGTGAACTGCTGCGATTTCTGTTCCTGTTGCATCGAGGCCGGTAAACTAAACTGCTGA Protein sequence MALISMRNVLQKHTPGYNPTDYGEYPMFVVAHRPPTVDFLLELGMAGIGGVIVNCCDFCSCCIEAGKLNC
Homology
BLAST of Carg02758 vs. NCBI nr
Match: KAG7035814.1 (hypothetical protein SDJN02_02613, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155.2 bits (391), Expect = 2.0e-34 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MALISMRNVLQKHTPGYNPTDYGEYPMFVVAHRPPTVDFLLELGMAGIGGVIVNCCDFCS 60
MALISMRNVLQKHTPGYNPTDYGEYPMFVVAHRPPTVDFLLELGMAGIGGVIVNCCDFCS
Sbjct: 1 MALISMRNVLQKHTPGYNPTDYGEYPMFVVAHRPPTVDFLLELGMAGIGGVIVNCCDFCS 60
Query: 61 CCIEAGKLNC 71
CCIEAGKLNC
Sbjct: 61 CCIEAGKLNC 70
BLAST of Carg02758 vs. NCBI nr
Match: KAG6605864.1 (hypothetical protein SDJN03_03181, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 134.0 bits (336), Expect = 4.9e-28 Identity = 65/82 (79.27%), Postives = 65/82 (79.27%), Query Frame = 0
Query: 1 MALISMRNVLQKHTPGYNPTDYGEYPMFVVAHRPPT------------VDFLLELGMAGI 60
MALISMRNVLQKHTPGYNPTDYGEYPMFVVAHRPPT VDFLLELGMAGI
Sbjct: 1 MALISMRNVLQKHTPGYNPTDYGEYPMFVVAHRPPTGRQFPSSYTGFEVDFLLELGMAGI 60
Query: 61 GGVIVNCCDFCSCCIEAGKLNC 71
GGVIVNCCDFCSCCIE C
Sbjct: 61 GGVIVNCCDFCSCCIEVRDACC 82
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7035814.1 | 2.0e-34 | 100.00 | hypothetical protein SDJN02_02613, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| KAG6605864.1 | 4.9e-28 | 79.27 | hypothetical protein SDJN03_03181, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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