Carg02730 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02730
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	DNA damage-repair/toleration protein DRT100-like
Location	Carg_Chr02: 7167327 .. 7168538 (+)
RNA-Seq Expression	Carg02730
Synteny	Carg02730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCTATATATTTGCTGCTGCATTCACTTCCATGGCCGTGCTGCAGCCTGCCCCCTTCCTGACAGTTTCATTTATTGCTCCACACATACCTTTAACGGATCAGAGCTTAAAATGCGCACCGTCGTTCCGTGCTTAACCATTTTACTGGTTTTGGCCGTTGGCTCGGCGGTTCATGGCTGCCCGCCTTCGGAACGGGCAGCTCTTCTGGCTTTCAGAGCTGCCCTTAAGGAGCCATATTTGGGGATCTTTAATTCCTGGACCGGAGACGACTGTTGCAACCGATGGTACGGCGTTAGCTGTGACCCAGTGACTCACCGGGTTGCCGATATTAACCTCCGGGGCGAATCTGAGGATCCGATTTTCGAACGGGCTCACCGTACTGGTTTTATGACCGGGTATATTTCTCCGGCCATCTGCAAGCTTACTCGTCTCTCCAGCGTTATCATTGCTGACTGGAAGGGAATCACCGGTGAGATTCCGAGGTGTATAACTTCGTTGCCGTTCCTCAGAATTCTTGACCTCATTGGTAACCGTCTCTCCGGCGACCTTCCGGCGGATATTGGTCGGCTTCATCGACTCACGGTGCTCAACGTGGCGGATAATTTGATTTCCGGTTCAATTCCGACTTCGCTTACGGCGCTTCCGAACTTGATGCATTTGGACCTCCGAAACAACAAAATTTCCGGAACGTTACCCCGAAATTTCGGGAATATGAGGATGTTGAGCCGGGCTTTGCTAAGCCGGAACCAGATCTCCGGTCCACTTCCCGCTTCCATCTCCCGGATCTATCGCTTAGCGGACCTGGATCTTTCCCTGAATCAACTCACCGGCAAAATCCCGGAATTCATGGGAAGAATGGCAGTGTTGGCCACATTGAATCTGGACGGCAACAAATTCTACGGCAACATTCCGCCGAGTCTGTTGGTTTCAGGAATAAGCAATTTGAATTTAAGCCGAAACTACCTAACCGGAGAGCTACCGGATGTTCTAGGGCCACGATCGTACTTCACGGTGCTGGATTTGTCTTACAACAACTTGAAAGGGCGGATTCCGAAATCGATATCGGAAGCTTCATATATCGGACACTTGGATTTGAGCCACAACCACCTGTGTGGGCCGATCCCAAGCGGGGCGCCATTCGATCATCTTGAAGCCGCATCATTTGTTTTCAATGATTGCCTTTGCGGGAAGCCGCTCAAACCCTGTTAG

mRNA sequence

ATGACTCTATATATTTGCTGCTGCATTCACTTCCATGGCCGTGCTGCAGCCTGCCCCCTTCCTGACAGTTTCATTTATTGCTCCACACATACCTTTAACGGATCAGAGCTTAAAATGCGCACCGTCGTTCCGTGCTTAACCATTTTACTGGTTTTGGCCGTTGGCTCGGCGGTTCATGGCTGCCCGCCTTCGGAACGGGCAGCTCTTCTGGCTTTCAGAGCTGCCCTTAAGGAGCCATATTTGGGGATCTTTAATTCCTGGACCGGAGACGACTGTTGCAACCGATGGTACGGCGTTAGCTGTGACCCAGTGACTCACCGGGTTGCCGATATTAACCTCCGGGGCGAATCTGAGGATCCGATTTTCGAACGGGCTCACCGTACTGGTTTTATGACCGGGTATATTTCTCCGGCCATCTGCAAGCTTACTCGTCTCTCCAGCGTTATCATTGCTGACTGGAAGGGAATCACCGGTGAGATTCCGAGGTGTATAACTTCGTTGCCGTTCCTCAGAATTCTTGACCTCATTGGTAACCGTCTCTCCGGCGACCTTCCGGCGGATATTGGTCGGCTTCATCGACTCACGGTGCTCAACGTGGCGGATAATTTGATTTCCGGTTCAATTCCGACTTCGCTTACGGCGCTTCCGAACTTGATGCATTTGGACCTCCGAAACAACAAAATTTCCGGAACGTTACCCCGAAATTTCGGGAATATGAGGATGTTGAGCCGGGCTTTGCTAAGCCGGAACCAGATCTCCGGTCCACTTCCCGCTTCCATCTCCCGGATCTATCGCTTAGCGGACCTGGATCTTTCCCTGAATCAACTCACCGGCAAAATCCCGGAATTCATGGGAAGAATGGCAGTGTTGGCCACATTGAATCTGGACGGCAACAAATTCTACGGCAACATTCCGCCGAGTCTGTTGGTTTCAGGAATAAGCAATTTGAATTTAAGCCGAAACTACCTAACCGGAGAGCTACCGGATGTTCTAGGGCCACGATCGTACTTCACGGTGCTGGATTTGTCTTACAACAACTTGAAAGGGCGGATTCCGAAATCGATATCGGAAGCTTCATATATCGGACACTTGGATTTGAGCCACAACCACCTGTGTGGGCCGATCCCAAGCGGGGCGCCATTCGATCATCTTGAAGCCGCATCATTTGTTTTCAATGATTGCCTTTGCGGGAAGCCGCTCAAACCCTGTTAG

Coding sequence (CDS)

ATGACTCTATATATTTGCTGCTGCATTCACTTCCATGGCCGTGCTGCAGCCTGCCCCCTTCCTGACAGTTTCATTTATTGCTCCACACATACCTTTAACGGATCAGAGCTTAAAATGCGCACCGTCGTTCCGTGCTTAACCATTTTACTGGTTTTGGCCGTTGGCTCGGCGGTTCATGGCTGCCCGCCTTCGGAACGGGCAGCTCTTCTGGCTTTCAGAGCTGCCCTTAAGGAGCCATATTTGGGGATCTTTAATTCCTGGACCGGAGACGACTGTTGCAACCGATGGTACGGCGTTAGCTGTGACCCAGTGACTCACCGGGTTGCCGATATTAACCTCCGGGGCGAATCTGAGGATCCGATTTTCGAACGGGCTCACCGTACTGGTTTTATGACCGGGTATATTTCTCCGGCCATCTGCAAGCTTACTCGTCTCTCCAGCGTTATCATTGCTGACTGGAAGGGAATCACCGGTGAGATTCCGAGGTGTATAACTTCGTTGCCGTTCCTCAGAATTCTTGACCTCATTGGTAACCGTCTCTCCGGCGACCTTCCGGCGGATATTGGTCGGCTTCATCGACTCACGGTGCTCAACGTGGCGGATAATTTGATTTCCGGTTCAATTCCGACTTCGCTTACGGCGCTTCCGAACTTGATGCATTTGGACCTCCGAAACAACAAAATTTCCGGAACGTTACCCCGAAATTTCGGGAATATGAGGATGTTGAGCCGGGCTTTGCTAAGCCGGAACCAGATCTCCGGTCCACTTCCCGCTTCCATCTCCCGGATCTATCGCTTAGCGGACCTGGATCTTTCCCTGAATCAACTCACCGGCAAAATCCCGGAATTCATGGGAAGAATGGCAGTGTTGGCCACATTGAATCTGGACGGCAACAAATTCTACGGCAACATTCCGCCGAGTCTGTTGGTTTCAGGAATAAGCAATTTGAATTTAAGCCGAAACTACCTAACCGGAGAGCTACCGGATGTTCTAGGGCCACGATCGTACTTCACGGTGCTGGATTTGTCTTACAACAACTTGAAAGGGCGGATTCCGAAATCGATATCGGAAGCTTCATATATCGGACACTTGGATTTGAGCCACAACCACCTGTGTGGGCCGATCCCAAGCGGGGCGCCATTCGATCATCTTGAAGCCGCATCATTTGTTTTCAATGATTGCCTTTGCGGGAAGCCGCTCAAACCCTGTTAG

Protein sequence

MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC

Homology

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BLAST of Carg02730 vs. NCBI nr
Match: KAG7035842.1 (DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 835.1 bits (2156), Expect = 2.6e-238
Identity = 403/403 (100.00%), Postives = 403/403 (100.00%), Query Frame = 0


Query: 1   MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60
           MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG
Sbjct: 1   MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60

Query: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120
           CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP
Sbjct: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120

Query: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180
           IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL
Sbjct: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180

Query: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMR 240
           SGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMR
Sbjct: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMR 240

Query: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300
           MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF
Sbjct: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300

Query: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360
           YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY
Sbjct: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360

Query: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC
Sbjct: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 403

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BLAST of Carg02730 vs. NCBI nr
Match: KAG6605899.1 (DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 833.2 bits (2151), Expect = 9.7e-238
Identity = 402/403 (99.75%), Postives = 402/403 (99.75%), Query Frame = 0


Query: 1   MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60
           MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG
Sbjct: 1   MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60

Query: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120
           CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP
Sbjct: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120

Query: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180
           IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL
Sbjct: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180

Query: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMR 240
           SGDLPADIGRLHRLTVLNVADNLISGSIP SLTALPNLMHLDLRNNKISGTLPRNFGNMR
Sbjct: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPASLTALPNLMHLDLRNNKISGTLPRNFGNMR 240

Query: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300
           MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF
Sbjct: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300

Query: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360
           YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY
Sbjct: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360

Query: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC
Sbjct: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 403

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BLAST of Carg02730 vs. NCBI nr
Match: XP_023532531.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 831.2 bits (2146), Expect = 3.7e-237
Identity = 401/403 (99.50%), Postives = 401/403 (99.50%), Query Frame = 0


Query: 1   MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60
           M LYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG
Sbjct: 1   MALYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60

Query: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120
           CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP
Sbjct: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120

Query: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180
           IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL
Sbjct: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180

Query: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMR 240
           SGDLPADIGRLHRLTVLNVADNLISGSIP SLTALPNLMHLDLRNNKISGTLPRNFGNMR
Sbjct: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPASLTALPNLMHLDLRNNKISGTLPRNFGNMR 240

Query: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300
           MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF
Sbjct: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300

Query: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360
           YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY
Sbjct: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360

Query: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC
Sbjct: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 403

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BLAST of Carg02730 vs. NCBI nr
Match: XP_022995095.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita maxima])

HSP 1 Score: 807.7 bits (2085), Expect = 4.4e-230
Identity = 392/403 (97.27%), Postives = 394/403 (97.77%), Query Frame = 0


Query: 1   MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60
           M LYIC CIHFHGRAAACPL D FIYCSTHTFNGSELKMRTVVPCLTILLVLAV SAVHG
Sbjct: 1   MALYICRCIHFHGRAAACPLSDIFIYCSTHTFNGSELKMRTVVPCLTILLVLAVCSAVHG 60

Query: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120
           CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP
Sbjct: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120

Query: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180
           IFERAHRTGFMTGYISPAICKLTRLS VIIADWKGITGEIPRCITSLPFLRILDLIGNRL
Sbjct: 121 IFERAHRTGFMTGYISPAICKLTRLSGVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180

Query: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMR 240
           SG LPADIGRLHRLTVLNVADNLISGSIP SLTALPNLMHLDLRNNKISG LPRNFGN+R
Sbjct: 181 SGYLPADIGRLHRLTVLNVADNLISGSIPASLTALPNLMHLDLRNNKISGPLPRNFGNLR 240

Query: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300
           MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF
Sbjct: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300

Query: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360
           +GNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY
Sbjct: 301 FGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360

Query: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC
Sbjct: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 403

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BLAST of Carg02730 vs. NCBI nr
Match: XP_022958717.1 (DNA damage-repair/toleration protein DRT100-like [Cucurbita moschata])

HSP 1 Score: 748.0 bits (1930), Expect = 4.1e-212
Identity = 364/365 (99.73%), Postives = 364/365 (99.73%), Query Frame = 0


Query: 39  MRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYG 98
           MRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYG
Sbjct: 1   MRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYG 60

Query: 99  VSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITG 158
           VSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITG
Sbjct: 61  VSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITG 120

Query: 159 EIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNL 218
           EIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIP SLTALPNL
Sbjct: 121 EIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPASLTALPNL 180

Query: 219 MHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTG 278
           MHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTG
Sbjct: 181 MHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTG 240

Query: 279 KIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFT 338
           KIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFT
Sbjct: 241 KIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFT 300

Query: 339 VLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGK 398
           VLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGK
Sbjct: 301 VLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGK 360

Query: 399 PLKPC 404
           PLKPC
Sbjct: 361 PLKPC 365

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BLAST of Carg02730 vs. ExPASy Swiss-Prot
Match: Q00874 (DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=DRT100 PE=2 SV=2)

HSP 1 Score: 432.6 bits (1111), Expect = 5.0e-120
Identity = 207/357 (57.98%), Postives = 269/357 (75.35%), Query Frame = 0


Query: 46  LTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWT-GDDCCNRWYGVSCDPV 105
           L  ++ ++V S V  C P ++ AL AF+++L EP LGIFN+W+   DCC  WYG+SCDP 
Sbjct: 12  LLAVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPD 71

Query: 106 THRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCI 165
           + RV DI+LRGESED IF++A R+G+M+G I PA+C LT L+S+++ADWKGITGEIP CI
Sbjct: 72  SGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCI 131

Query: 166 TSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLR 225
           TSL  LRILDL GN+++G++PA+IG+L +L VLN+A+N +SG IP SLT+L  L HL+L 
Sbjct: 132 TSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELT 191

Query: 226 NNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFM 285
            N I+G +P +FG+++MLSR LL RN+++G +P SIS + RLADLDLS N + G IPE+M
Sbjct: 192 ENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWM 251

Query: 286 GRMAVLATLNLDGNKFYGNIPPSLLV-SGISNLNLSRNYLTGELPDVLGPRSYFTVLDLS 345
           G M VL+ LNLD N   G IP SLL  SG+   NLSRN L G +PDV G ++Y   LDLS
Sbjct: 252 GNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLS 311

Query: 346 YNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPL 401
           +N+L GRIP S+S A ++GHLD+SHN LCG IP+G PFDHLEA SF  N CLCG PL
Sbjct: 312 HNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPL 368

[Close]

BLAST of Carg02730 vs. ExPASy Swiss-Prot
Match: Q69SP5 (LRR receptor-like serine/threonine-protein kinase ER1 OS=Oryza sativa subsp. japonica OX=39947 GN=ER1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.5e-43
Identity = 115/331 (34.74%), Postives = 166/331 (50.15%), Query Frame = 0


Query: 46  LTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVT 105
           L  LL++AV  A  G      + LL  + + +     +   W G D C+ W GV CD VT
Sbjct: 13  LVALLLVAVAVADDG------STLLEIKKSFRN-VDNVLYDWAGGDYCS-WRGVLCDNVT 72

Query: 106 HRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCIT 165
             VA +NL G +             + G ISPA+ +L  + S+ +    G++G+IP  I 
Sbjct: 73  FAVAALNLSGLN-------------LGGEISPAVGRLKGIVSIDLKS-NGLSGQIPDEIG 132

Query: 166 SLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRN 225
               L+ LDL  N L GD+P  + +L  +  L + +N + G IP++L+ LPNL  LDL  
Sbjct: 133 DCSSLKTLDLSFNSLDGDIPFSVSKLKHIESLILKNNQLIGVIPSTLSQLPNLKILDLAQ 192

Query: 226 NKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMG 285
           NK+SG +PR      +L    L  N + G +   I ++  L   D+  N LTG IPE +G
Sbjct: 193 NKLSGEIPRLIYWNEVLQYLGLRGNNLEGSISPDICQLTGLWYFDVKNNSLTGPIPETIG 252

Query: 286 RMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYN 345
                  L+L  NK  G+IP ++    ++ L+L  N  TG +P V+G      VLDLSYN
Sbjct: 253 NCTSFQVLDLSYNKLSGSIPFNIGFLQVATLSLQGNMFTGPIPSVIGLMQALAVLDLSYN 312

Query: 346 NLKGRIPKSISEASYIGHLDLSHNHLCGPIP 377
            L G IP  +   +Y   L +  N L GPIP
Sbjct: 313 QLSGPIPSILGNLTYTEKLYMQGNKLTGPIP 321

[Close]

BLAST of Carg02730 vs. ExPASy Swiss-Prot
Match: Q9LZV7 (Leucine-rich repeat receptor-like protein kinase PXC2 OS=Arabidopsis thaliana OX=3702 GN=PXC2 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.1e-42
Identity = 104/312 (33.33%), Postives = 172/312 (55.13%), Query Frame = 0


Query: 69  LLAFRAALKEPYLGIFNSWTGDDC--CNRWYGVSCDPVTHRVADINLRGESEDPIFERAH 128
           L+ F+A L +P L   +SW  +D   CN W G +CDP T+RV+++ L   S         
Sbjct: 31  LIVFKAGLDDP-LSKLSSWNSEDYDPCN-WVGCTCDPATNRVSELRLDAFS--------- 90

Query: 129 RTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLP- 188
               ++G+I   + +L  L ++++++   +TG +      L  L+++D  GN LSG +P 
Sbjct: 91  ----LSGHIGRGLLRLQFLHTLVLSN-NNLTGTLNPEFPHLGSLQVVDFSGNNLSGRIPD 150

Query: 189 ADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMRMLSRA 248
               +   L  +++A+N ++GSIP SL+    L HL+L +N++SG LPR+   ++ L   
Sbjct: 151 GFFEQCGSLRSVSLANNKLTGSIPVSLSYCSTLTHLNLSSNQLSGRLPRDIWFLKSLKSL 210

Query: 249 LLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKFYGNIP 308
             S N + G +P  +  +Y L  ++LS N  +G +P  +GR + L +L+L  N F GN+P
Sbjct: 211 DFSHNFLQGDIPDGLGGLYDLRHINLSRNWFSGDVPSDIGRCSSLKSLDLSENYFSGNLP 270

Query: 309 PSLLVSG-ISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASYIGHL 368
            S+   G  S++ L  N L GE+PD +G  +   +LDLS NN  G +P S+    ++  L
Sbjct: 271 DSMKSLGSCSSIRLRGNSLIGEIPDWIGDIATLEILDLSANNFTGTVPFSLGNLEFLKDL 326

Query: 369 DLSHNHLCGPIP 377
           +LS N L G +P
Sbjct: 331 NLSANMLAGELP 326

[Close]

BLAST of Carg02730 vs. ExPASy Swiss-Prot
Match: F4J8G2 (Receptor-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=RLP33 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.2e-42
Identity = 114/339 (33.63%), Postives = 170/339 (50.15%), Query Frame = 0


Query: 58  VHGCPPSERAALLAFR--AALKEPYLGI-----FNSW-TGDDCCNRWYGVSCDPVTHRVA 117
           +H C   +R ALL F+    +K+P  G        SW  G DCC+ W G++CD  T  V 
Sbjct: 27  IHLCHFEQRDALLEFKNEFKIKKPCFGCPSPLKTKSWENGSDCCH-WDGITCDAKTGEVI 86

Query: 118 DINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPF 177
           +I+L        F        +  +            + +   +  ++G+I   I +L  
Sbjct: 87  EIDLMCSCLHGWFHSNSNLSMLQNF---------HFLTTLDLSYNHLSGQISSSIGNLSH 146

Query: 178 LRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKIS 237
           L  LDL GN  SG +P+ +G L  LT L++ DN   G IP+SL  L  L  LDL  N   
Sbjct: 147 LTTLDLSGNNFSGWIPSSLGNLFHLTSLHLYDNNFGGEIPSSLGNLSYLTFLDLSTNNFV 206

Query: 238 GTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAV 297
           G +P +FG++  LS   L  N++SG LP  +  + +L+++ LS NQ TG +P  +  +++
Sbjct: 207 GEIPSSFGSLNQLSILRLDNNKLSGNLPLEVINLTKLSEISLSHNQFTGTLPPNITSLSI 266

Query: 298 LATLNLDGNKFYGNIPPSLL-VSGISNLNLSRNYLTG--ELPDVLGPRSYFTVLDLSYNN 357
           L + +  GN F G IP SL  +  I+ + L  N L+G  E  ++  P S   VL L  NN
Sbjct: 267 LESFSASGNNFVGTIPSSLFTIPSITLIFLDNNQLSGTLEFGNISSP-SNLLVLQLGGNN 326

Query: 358 LKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLE 386
           L+G IP SIS    +  LDLSH ++ G +     F HL+
Sbjct: 327 LRGPIPTSISRLVNLRTLDLSHFNIQGQVDFNI-FSHLK 353

[Close]

BLAST of Carg02730 vs. ExPASy Swiss-Prot
Match: Q9LH52 (Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.6e-41
Identity = 117/347 (33.72%), Postives = 174/347 (50.14%), Query Frame = 0


Query: 59  HGCPPSERAALLAFRAALKEPYLGIFNSWT-GDDCCNRWYGVSCDPVTHRVADINLRGES 118
           + C  +++ ALL  + AL  P L   +SW    DCC  W GV C     RV  +++    
Sbjct: 22  YSCTENDKNALLQIKKALGNPPL--LSSWNPRTDCCTGWTGVEC--TNRRVTGLSV---- 81

Query: 119 EDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIG 178
                     +G ++G IS  I  L  L ++  +    +TG IPR IT L  L  L L  
Sbjct: 82  ---------TSGEVSGQISYQIGDLVDLRTLDFSYLPHLTGNIPRTITKLKNLNTLYLKH 141

Query: 179 NRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFG 238
             LSG +P  I  L  LT L+++ N  +G IP SL+ +P L  + + +NK++G++P +FG
Sbjct: 142 TSLSGPIPDYISELKSLTFLDLSFNQFTGPIPGSLSQMPKLEAIQINDNKLTGSIPNSFG 201

Query: 239 N-MRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLD 298
           + +  +    LS N++SG +P S+S+ Y    +DLS N   G    F GR     T+ +D
Sbjct: 202 SFVGNVPNLYLSNNKLSGKIPESLSK-YDFNAVDLSGNGFEGDAFMFFGRNK--TTVRVD 261

Query: 299 GNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSIS 358
                                LSRN    +L  V   RS  + LDLS N++ G+IP +++
Sbjct: 262 ---------------------LSRNMFNFDLVKVKFARSIVS-LDLSQNHIYGKIPPALT 321

Query: 359 EASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           +  ++ H ++S NHLCG IPSG      E ++F  N CLCG PLK C
Sbjct: 322 KL-HLEHFNVSDNHLCGKIPSGGLLQTFEPSAFAHNICLCGTPLKAC 325

[Close]

BLAST of Carg02730 vs. ExPASy TrEMBL
Match: A0A6J1K361 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=LOC111490742 PE=4 SV=1)

HSP 1 Score: 807.7 bits (2085), Expect = 2.1e-230
Identity = 392/403 (97.27%), Postives = 394/403 (97.77%), Query Frame = 0


Query: 1   MTLYICCCIHFHGRAAACPLPDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHG 60
           M LYIC CIHFHGRAAACPL D FIYCSTHTFNGSELKMRTVVPCLTILLVLAV SAVHG
Sbjct: 1   MALYICRCIHFHGRAAACPLSDIFIYCSTHTFNGSELKMRTVVPCLTILLVLAVCSAVHG 60

Query: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120
           CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP
Sbjct: 61  CPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDP 120

Query: 121 IFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180
           IFERAHRTGFMTGYISPAICKLTRLS VIIADWKGITGEIPRCITSLPFLRILDLIGNRL
Sbjct: 121 IFERAHRTGFMTGYISPAICKLTRLSGVIIADWKGITGEIPRCITSLPFLRILDLIGNRL 180

Query: 181 SGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMR 240
           SG LPADIGRLHRLTVLNVADNLISGSIP SLTALPNLMHLDLRNNKISG LPRNFGN+R
Sbjct: 181 SGYLPADIGRLHRLTVLNVADNLISGSIPASLTALPNLMHLDLRNNKISGPLPRNFGNLR 240

Query: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300
           MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF
Sbjct: 241 MLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKF 300

Query: 301 YGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360
           +GNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY
Sbjct: 301 FGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASY 360

Query: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC
Sbjct: 361 IGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 403

[Close]

BLAST of Carg02730 vs. ExPASy TrEMBL
Match: A0A6J1H2L3 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 GN=LOC111459859 PE=4 SV=1)

HSP 1 Score: 748.0 bits (1930), Expect = 2.0e-212
Identity = 364/365 (99.73%), Postives = 364/365 (99.73%), Query Frame = 0


Query: 39  MRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYG 98
           MRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYG
Sbjct: 1   MRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYG 60

Query: 99  VSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITG 158
           VSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITG
Sbjct: 61  VSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITG 120

Query: 159 EIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNL 218
           EIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIP SLTALPNL
Sbjct: 121 EIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPASLTALPNL 180

Query: 219 MHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTG 278
           MHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTG
Sbjct: 181 MHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTG 240

Query: 279 KIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFT 338
           KIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFT
Sbjct: 241 KIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFT 300

Query: 339 VLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGK 398
           VLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGK
Sbjct: 301 VLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGK 360

Query: 399 PLKPC 404
           PLKPC
Sbjct: 361 PLKPC 365

[Close]

BLAST of Carg02730 vs. ExPASy TrEMBL
Match: A0A6J1FUX0 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 GN=LOC111448666 PE=4 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 5.6e-199
Identity = 340/395 (86.08%), Postives = 362/395 (91.65%), Query Frame = 0


Query: 14  RAAACPL-----PDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHGCPPSERAA 73
           R+  CP      PD FIY  T  FNGS+LKMRT V CL+ILL+LAV SAVH CPPSERAA
Sbjct: 96  RSLHCPCFTLIPPDIFIYFFTVAFNGSQLKMRTAVRCLSILLILAVSSAVHACPPSERAA 155

Query: 74  LLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDPIFERAHRT 133
           LLAFRAAL+EPYLGIFNSWTGDDCCNRWYG+SCD VTHRVADINLRGESEDPIFERAHRT
Sbjct: 156 LLAFRAALQEPYLGIFNSWTGDDCCNRWYGISCDSVTHRVADINLRGESEDPIFERAHRT 215

Query: 134 GFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADI 193
           GFMTG+ISPAICKLTRLS V+IADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADI
Sbjct: 216 GFMTGHISPAICKLTRLSGVVIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADI 275

Query: 194 GRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMRMLSRALLS 253
           GRL RLTVLNVADNLISGSIP SL ++PNLMHLDLRNNKISG LP+NFGNMRMLSRALLS
Sbjct: 276 GRLRRLTVLNVADNLISGSIPASLASIPNLMHLDLRNNKISGPLPQNFGNMRMLSRALLS 335

Query: 254 RNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKFYGNIPPSL 313
           RNQISG LP SIS+IYRLADLDLS+NQLTG IPE++GRMAVLATLNLDGNKF G+IP S+
Sbjct: 336 RNQISGSLPGSISKIYRLADLDLSMNQLTGPIPEWIGRMAVLATLNLDGNKFSGSIPASI 395

Query: 314 LVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASYIGHLDLSH 373
           LVS IS+LNLSRNYLTG +PDV GPRSYFTVLDLSYNNLKG IPKS+S+ASYIGH+DLSH
Sbjct: 396 LVSSISDLNLSRNYLTGNVPDVFGPRSYFTVLDLSYNNLKGAIPKSVSQASYIGHMDLSH 455

Query: 374 NHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           NHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLK C
Sbjct: 456 NHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKAC 490

[Close]

BLAST of Carg02730 vs. ExPASy TrEMBL
Match: A0A6J1JFH2 (DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=LOC111484043 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.1e-198
Identity = 337/383 (87.99%), Postives = 357/383 (93.21%), Query Frame = 0


Query: 21  PDSFIYCSTHTFNGSELKMRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPY 80
           PD FIY  T  FNGS+LKMRT V CL ILL+LAV SAVH CPPSERAALLAFRAAL+EPY
Sbjct: 46  PDIFIYFFTVAFNGSQLKMRTAVRCLFILLILAVSSAVHACPPSERAALLAFRAALQEPY 105

Query: 81  LGIFNSWTGDDCCNRWYGVSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAIC 140
           LGIFNSWTGDDCCNRWYG+SCD VTHRVADINLRGESEDPIFERAHRTGFMTG+ISPAIC
Sbjct: 106 LGIFNSWTGDDCCNRWYGISCDSVTHRVADINLRGESEDPIFERAHRTGFMTGHISPAIC 165

Query: 141 KLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVA 200
           KLTRLS V+IADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRL RLTVLNVA
Sbjct: 166 KLTRLSGVVIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRLRRLTVLNVA 225

Query: 201 DNLISGSIPTSLTALPNLMHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASI 260
           DNLISGSIP SL +LPNLMHLDLRNNKISG LP+NFGNMRMLSRALLSRNQISGPLP SI
Sbjct: 226 DNLISGSIPASLASLPNLMHLDLRNNKISGPLPQNFGNMRMLSRALLSRNQISGPLPGSI 285

Query: 261 SRIYRLADLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSR 320
           S+IYRLADLDLS+NQLTG IP+++GRMAVLATLNLDGNK  G+IP S+LVS IS+LNLSR
Sbjct: 286 SKIYRLADLDLSMNQLTGPIPDWIGRMAVLATLNLDGNKLSGDIPASVLVSSISDLNLSR 345

Query: 321 NYLTGELPDVLGPRSYFTVLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAP 380
           NYLTG +PDV GPRSYFTVLDLSYNNLKG IPKS+S+ASYIGH+DLSHNHLCGPIPSGAP
Sbjct: 346 NYLTGNVPDVFGPRSYFTVLDLSYNNLKGAIPKSVSQASYIGHMDLSHNHLCGPIPSGAP 405

Query: 381 FDHLEAASFVFNDCLCGKPLKPC 404
           FDHLEAASFVFNDCLCGKPLK C
Sbjct: 406 FDHLEAASFVFNDCLCGKPLKAC 428

[Close]

BLAST of Carg02730 vs. ExPASy TrEMBL
Match: A0A1S3BMR1 (DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC103491529 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 1.9e-191
Identity = 332/376 (88.30%), Postives = 349/376 (92.82%), Query Frame = 0


Query: 30  HTF-NGSELKMR-TVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSW 89
           H F NGS LKMR T V CL+ILL+LAV SAVH CPPSERAALLAFRAAL EPYLGIFNSW
Sbjct: 16  HLFLNGSHLKMRTTAVRCLSILLILAVSSAVHACPPSERAALLAFRAALHEPYLGIFNSW 75

Query: 90  TGDDCCNRWYGVSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSS 149
           TGDDCCNRW+G+SCD VTHRVADINLRGE+EDPIFERAHRTG+MTGYISP ICKLTRLSS
Sbjct: 76  TGDDCCNRWHGISCDQVTHRVADINLRGEAEDPIFERAHRTGYMTGYISPEICKLTRLSS 135

Query: 150 VIIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGS 209
           VIIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRL RLTVLNVADNLISGS
Sbjct: 136 VIIADWKGITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRLRRLTVLNVADNLISGS 195

Query: 210 IPTSLTALPNLMHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLA 269
           IP+SLTAL NLMHLDLRNNK SG LPRNFGN+RMLSRALLSRNQ SG LP SIS+IYRLA
Sbjct: 196 IPSSLTALTNLMHLDLRNNKFSGRLPRNFGNLRMLSRALLSRNQFSGSLPDSISKIYRLA 255

Query: 270 DLDLSLNQLTGKIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGEL 329
           DLDLS NQL+G IP ++GRMAVLATLNLDGNKF G+IPPS+LVSGIS+LNLSRNYLTG L
Sbjct: 256 DLDLSQNQLSGVIPSWIGRMAVLATLNLDGNKFSGSIPPSILVSGISDLNLSRNYLTGNL 315

Query: 330 PDVLGPRSYFTVLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAA 389
           PDV G RSYFTVLDLSYNNLKG IPKS+SEASYIGHLDLSHNHLCGPIP+GAPFDHLEAA
Sbjct: 316 PDVFGQRSYFTVLDLSYNNLKGPIPKSVSEASYIGHLDLSHNHLCGPIPTGAPFDHLEAA 375

Query: 390 SFVFNDCLCGKPLKPC 404
           SFVFNDCLCGKPLK C
Sbjct: 376 SFVFNDCLCGKPLKAC 391

[Close]

BLAST of Carg02730 vs. TAIR 10
Match: AT3G20820.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 550.4 bits (1417), Expect = 1.2e-156
Identity = 260/358 (72.63%), Postives = 306/358 (85.47%), Query Frame = 0


Query: 46  LTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNRWYGVSCDPVT 105
           + +LL+L + S+   CPPS+R ALLAFR+AL EPYLGIFNSWTG DCC+ WYG+SCD +T
Sbjct: 5   VVVLLLLLLISSATCCPPSDRRALLAFRSALHEPYLGIFNSWTGQDCCHNWYGISCDSLT 64

Query: 106 HRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCIT 165
           HRVADINLRGESEDPIFERAHRTG+MTG+IS +IC+LTRLS++ IADWKGI+GEIP+CIT
Sbjct: 65  HRVADINLRGESEDPIFERAHRTGYMTGHISASICELTRLSAITIADWKGISGEIPKCIT 124

Query: 166 SLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRN 225
            LPFLR LDLIGN++SG +P DIGRL+RL VLNVADN ISGSIP SLT L +LMHLDLRN
Sbjct: 125 RLPFLRTLDLIGNQISGGIPYDIGRLNRLAVLNVADNRISGSIPKSLTNLSSLMHLDLRN 184

Query: 226 NKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFMG 285
           N ISG +P + G ++MLSRALLS N+I+G +P S++ IYRLAD+DLS NQL G IP  +G
Sbjct: 185 NLISGVIPSDVGRLKMLSRALLSGNRITGRIPESLTNIYRLADVDLSGNQLYGTIPPSLG 244

Query: 286 RMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRSYFTVLDLSYN 345
           RM+VLATLNLDGNK  G IP +L+ S + NLNLSRN L G++P+  GPRSYFTVLDLSYN
Sbjct: 245 RMSVLATLNLDGNKISGEIPQTLMTSSVMNLNLSRNLLQGKIPEGFGPRSYFTVLDLSYN 304

Query: 346 NLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPLKPC 404
           NLKG IP+SIS AS+IGHLDLSHNHLCG IP G+PFDHLEAASF+FNDCLCGKPL+ C
Sbjct: 305 NLKGPIPRSISGASFIGHLDLSHNHLCGRIPVGSPFDHLEAASFMFNDCLCGKPLRAC 362

[Close]

BLAST of Carg02730 vs. TAIR 10
Match: AT5G12940.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-140
Identity = 235/368 (63.86%), Postives = 288/368 (78.26%), Query Frame = 0


Query: 36  ELKMRTVVPCLTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWTGDDCCNR 95
           + K   V+    +++ L + + VH C PS+RAALL FRA L EPY+G+FN+W G DCC  
Sbjct: 2   DTKKSLVILLTNVVVFLLLSTTVHSCLPSDRAALLEFRAKLNEPYIGVFNTWKGLDCCKG 61

Query: 96  WYGVSCDPVTHRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKG 155
           WYGVSCDP T RVA I LRGESEDP+F++A R+G MTG ISP+ICKLTRLS +IIADWKG
Sbjct: 62  WYGVSCDPNTRRVAGITLRGESEDPLFQKAKRSGLMTGSISPSICKLTRLSGIIIADWKG 121

Query: 156 ITGEIPRCITSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTAL 215
           I+G IP CI +LPFLR LDL+GN+ SG +PA+IG+L RL VLN+ADN + G IP S+T L
Sbjct: 122 ISGVIPSCIENLPFLRHLDLVGNKFSGVIPANIGKLLRLKVLNLADNHLYGVIPPSITRL 181

Query: 216 PNLMHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQ 275
            +L HLDLRNN ISG +PR+ G ++M+SR LLS N+ISG +P S++RIYRLADL+LS+N+
Sbjct: 182 VSLSHLDLRNNNISGVIPRDIGRLKMVSRVLLSGNKISGQIPDSLTRIYRLADLELSMNR 241

Query: 276 LTGKIPEFMGRMAVLATLNLDGNKFYGNIPPSLLVSGISNLNLSRNYLTGELPDVLGPRS 335
           LTG IP   G+M+VLATLNLDGN   G IP SLL S ISNLNLS N +TG +P+  GPRS
Sbjct: 242 LTGPIPASFGKMSVLATLNLDGNLISGMIPGSLLASSISNLNLSGNLITGSIPNTFGPRS 301

Query: 336 YFTVLDLSYNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCL 395
           YFTVLDL+ N L+G IP SI+ AS+IGHLD+SHNHLCG IP G+PFDHL+A SF +N CL
Sbjct: 302 YFTVLDLANNRLQGPIPASITAASFIGHLDVSHNHLCGKIPMGSPFDHLDATSFAYNACL 361

Query: 396 CGKPLKPC 404
           CGKPL  C
Sbjct: 362 CGKPLGNC 369

[Close]

BLAST of Carg02730 vs. TAIR 10
Match: AT3G12610.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 432.6 bits (1111), Expect = 3.6e-121
Identity = 207/357 (57.98%), Postives = 269/357 (75.35%), Query Frame = 0


Query: 46  LTILLVLAVGSAVHGCPPSERAALLAFRAALKEPYLGIFNSWT-GDDCCNRWYGVSCDPV 105
           L  ++ ++V S V  C P ++ AL AF+++L EP LGIFN+W+   DCC  WYG+SCDP 
Sbjct: 12  LLAVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPD 71

Query: 106 THRVADINLRGESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCI 165
           + RV DI+LRGESED IF++A R+G+M+G I PA+C LT L+S+++ADWKGITGEIP CI
Sbjct: 72  SGRVTDISLRGESEDAIFQKAGRSGYMSGSIDPAVCDLTALTSLVLADWKGITGEIPPCI 131

Query: 166 TSLPFLRILDLIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLR 225
           TSL  LRILDL GN+++G++PA+IG+L +L VLN+A+N +SG IP SLT+L  L HL+L 
Sbjct: 132 TSLASLRILDLAGNKITGEIPAEIGKLSKLAVLNLAENQMSGEIPASLTSLIELKHLELT 191

Query: 226 NNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLADLDLSLNQLTGKIPEFM 285
            N I+G +P +FG+++MLSR LL RN+++G +P SIS + RLADLDLS N + G IPE+M
Sbjct: 192 ENGITGVIPADFGSLKMLSRVLLGRNELTGSIPESISGMERLADLDLSKNHIEGPIPEWM 251

Query: 286 GRMAVLATLNLDGNKFYGNIPPSLLV-SGISNLNLSRNYLTGELPDVLGPRSYFTVLDLS 345
           G M VL+ LNLD N   G IP SLL  SG+   NLSRN L G +PDV G ++Y   LDLS
Sbjct: 252 GNMKVLSLLNLDCNSLTGPIPGSLLSNSGLDVANLSRNALEGTIPDVFGSKTYLVSLDLS 311

Query: 346 YNNLKGRIPKSISEASYIGHLDLSHNHLCGPIPSGAPFDHLEAASFVFNDCLCGKPL 401
           +N+L GRIP S+S A ++GHLD+SHN LCG IP+G PFDHLEA SF  N CLCG PL
Sbjct: 312 HNSLSGRIPDSLSSAKFVGHLDISHNKLCGRIPTGFPFDHLEATSFSDNQCLCGGPL 368

[Close]

BLAST of Carg02730 vs. TAIR 10
Match: AT2G26380.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-53
Identity = 130/340 (38.24%), Postives = 187/340 (55.00%), Query Frame = 0


Query: 56  SAVHGCPPSERAALLAFRAALKEPYLGIFNSW-TGDDCCNRWYGVSCDPVTHRVADINLR 115
           +A   C P + A LLAF++ + +   GI ++W  G DCC+ W GVSC P  +RV  + +R
Sbjct: 24  TAAATCHPDDEAGLLAFKSGITKDPSGILSTWKKGTDCCS-WNGVSC-PNGNRVVVLTIR 83

Query: 116 GESEDPIFERAHRTGFMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILD 175
            ES+D          F++G ISP++ KL  L  V+  + K ITG  P  +  LP L+ + 
Sbjct: 84  IESDDAGI-------FLSGTISPSLAKLQHLEGVVFINLKNITGPFPPFLFRLPHLKYVY 143

Query: 176 LIGNRLSGDLPADIGRLHRLTVLNVADNLISGSIPTSLTALPNLMHLDLRNNKISGTLPR 235
           L   RLSG LPA+IG L+RL  L V  N   GSIP+S++ L  L +L+L  N ++GT+P 
Sbjct: 144 LENTRLSGPLPANIGALNRLDTLTVKGNRFIGSIPSSISNLTRLNYLNLGGNLLTGTIPL 203

Query: 236 NFGNMRMLSR------------------------ALLSRNQISGPLPASISRIYR-LADL 295
              N++++S                           LSRN+ SG LP SI+ +   LA L
Sbjct: 204 GIANLKLISNLNLDGNRLSGTIPDIFKSMTNLRILTLSRNRFSGKLPPSIASLAPVLAFL 263

Query: 296 DLSLNQLTGKIPEFMGRMAVLATLNLDGNKFYGNIPPSLL-VSGISNLNLSRNYLTGELP 355
           +L  N L+G IP ++ R   L TL+L  N+F G +P SL  ++ I+N+NLS N LT   P
Sbjct: 264 ELGQNNLSGSIPSYLSRFVALDTLDLSKNRFSGAVPKSLAKLTKIANINLSHNLLTNPFP 323

Query: 356 DVLGPRSYFTVLDLSYNNL-KGRIPKSISEASYIGHLDLS 368
            VL  ++Y   LDLSYN      IP+ ++ AS +G L L+
Sbjct: 324 -VLNVKNYILTLDLSYNKFHMETIPEWVTSASILGSLKLA 353

[Close]

BLAST of Carg02730 vs. TAIR 10
Match: AT1G33600.1 (Leucine-rich repeat (LRR) family protein )

HSP 1 Score: 203.8 bits (517), Expect = 2.7e-52
Identity = 145/467 (31.05%), Postives = 214/467 (45.82%), Query Frame = 0


Query: 61  CPPSERAALLAFRAALKEPYLGIFNSW-TGDDCCNRWYGVSCDPVTHRVADINLRGESED 120
           C P + A LLAF++ + +   GI +SW  G DCC+ W GV C  +T+RV  + + G+S+ 
Sbjct: 28  CHPDDEAGLLAFKSGITQDPTGILSSWKKGTDCCS-WKGVGC--LTNRVTGLTINGQSD- 87

Query: 121 PIFERAHRTG-FMTGYISPAICKLTRLSSVIIADWKGITGEIPRCITSLPFLRILDLIGN 180
                   TG F++G ISP++ KL  L  +   + + ITG  P+ +  LP ++ +    +
Sbjct: 88  -------VTGSFLSGTISPSLAKLQHLVGIYFTNLRNITGSFPQFLFQLPNVKQVYFTNS 147

Query: 181 RLSGDLPADIG------------------------RLHRLTVLNVADNLISGSIPTSLTA 240
           RLSG LPA+IG                         L RL +LN+ DNL++G+IP  L  
Sbjct: 148 RLSGPLPANIGALSELGELSLDGNLFTGPIPSSISNLTRLYLLNLGDNLLTGTIPLGLAN 207

Query: 241 LPNLMHLDLRNNKISGTLPRNFGNMRMLSRALLSRNQISGPLPASISRIYRLAD-LDLSL 300
           L  L+ L+  NN++S T+P  F +M+ L    LSRN+ SG LP SI+ +  + + LDLS 
Sbjct: 208 LKILLSLNFGNNRLSETIPDIFKSMQKLQSLTLSRNKFSGNLPPSIASLKPILNYLDLSQ 267

Query: 301 NQLTGKIPEFMGRMAVLATLNLDGNKFYGNIPPSLL-VSGISNLNLSRNYLTGELPDV-- 360
           N L+G IP F+    VL +L+L  N+F G +P SL  +  + +LNLS N+LTG LP +  
Sbjct: 268 NNLSGTIPTFLSNFKVLDSLDLSRNRFSGVVPKSLANMPKLFHLNLSHNFLTGPLPAMKN 327

Query: 361 ------------------------------------------------LGPRSYFTV--- 404
                                                           + P  YF +   
Sbjct: 328 VDGLATLDLSYNQFHLKTIPKWVTSSPSMYSLKLVKCGINMSLDNWKPVRPNIYFYIDLS 387

The following BLAST results are available for this feature:

BLAST of Carg02730 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035842.1	2.6e-238	100.00	DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. arg...	[more]
KAG6605899.1	9.7e-238	99.75	DNA damage-repair/toleration protein, partial [Cucurbita argyrosperma subsp. sor...	[more]
XP_023532531.1	3.7e-237	99.50	DNA damage-repair/toleration protein DRT100-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995095.1	4.4e-230	97.27	DNA damage-repair/toleration protein DRT100-like [Cucurbita maxima]	[more]
XP_022958717.1	4.1e-212	99.73	DNA damage-repair/toleration protein DRT100-like [Cucurbita moschata]	[more]

BLAST of Carg02730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q00874	5.0e-120	57.98	DNA damage-repair/toleration protein DRT100 OS=Arabidopsis thaliana OX=3702 GN=D...	[more]
Q69SP5	6.5e-43	34.74	LRR receptor-like serine/threonine-protein kinase ER1 OS=Oryza sativa subsp. jap...	[more]
Q9LZV7	1.1e-42	33.33	Leucine-rich repeat receptor-like protein kinase PXC2 OS=Arabidopsis thaliana OX...	[more]
F4J8G2	3.2e-42	33.63	Receptor-like protein 33 OS=Arabidopsis thaliana OX=3702 GN=RLP33 PE=3 SV=1	[more]
Q9LH52	4.6e-41	33.72	Leucine-rich repeat protein FLOR 1 OS=Arabidopsis thaliana OX=3702 GN=FLR1 PE=1 ...	[more]

BLAST of Carg02730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K361	2.1e-230	97.27	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1H2L3	2.0e-212	99.73	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1FUX0	5.6e-199	86.08	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JFH2	2.1e-198	87.99	DNA damage-repair/toleration protein DRT100-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A1S3BMR1	1.9e-191	88.30	DNA-damage-repair/toleration protein DRT100-like OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of Carg02730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20820.1	1.2e-156	72.63	Leucine-rich repeat (LRR) family protein	[more]
AT5G12940.1	1.2e-140	63.86	Leucine-rich repeat (LRR) family protein	[more]
AT3G12610.1	3.6e-121	57.98	Leucine-rich repeat (LRR) family protein	[more]
AT2G26380.1	3.2e-53	38.24	Leucine-rich repeat (LRR) family protein	[more]
AT1G33600.1	2.7e-52	31.05	Leucine-rich repeat (LRR) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 193..252 e-value: 8.0E-8 score: 31.9
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 64..231 e-value: 1.6E-39 score: 137.2
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 232..312 e-value: 2.8E-20 score: 74.5
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 313..403 e-value: 5.0E-27 score: 96.4
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 63..102 e-value: 2.2E-9 score: 37.5
None	No IPR available	PANTHER	PTHR48060:SF3	LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN	coord: 41..403
None	No IPR available	PANTHER	PTHR48060	DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100	coord: 41..403
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 61..402

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02730-RA	Carg02730-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding