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Carg02723 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACGCGCGCAATCCACTTCCTTTAATCCCTATATATATATTGCGTCGCTTCCGGCGCCAAATTCCTCGCTCATTCTACCATTCACTCACCTCTCTCACTCCTCCGCCTAATACCCCTTCGACATTCGTCTCTGTTCTTACCGTTCTTTCGCCATTTTCTTTCAATTTGGAAGCTGCTTTAAAACCCTCCAATCTTTTCGGGGGGTTTCTTGCTGTTCTTATCGACGCCTTTGAATTGGGGGTACGACCCAAGAAGGCATCCATGGCTTCTCAGGTGTTGGTAGCTCTTGCACTTTCGCTTGTTGGTGGATTCAGTACTTCTCTAGGTCAGTACCAAGTTTTTTCTTTAATATGCTTTGTGGGTGTTGTCTGTTTCTTGTTTTATTTTCGTTTGTTCTTTGTTCTTGATCATCTTTGGTTATGTTTTCATGTATTTGGTAGTTGGGTCTTGAGGCCAAATTTAATTTGAAATGTTTCTTGAATAATATGTAGAATCTTTCACATAGTGAACACAGAATCTTTAAATTTGGGACTTAGTTATTTACAATTCGTAATGGCATGGTGTCCCTATTGAGCCTTGACACCTACTCATCACTTCTGGTCCATGATCATTTTAAAACACCAGACTCATTCGTGTTCATAACATTTGGAACAGGTGCACTTTTGGTGATTCTTAGCGGTGCCCCAAATCTGAAGATGCTCGGTCTCTTACAGGTGATGCTTGTGGAAGTTTCATTGTTTGGTTGTTTTGGAGTGGGAGTGTAGCTTTGTAGCATAAATTCAATCCTGGATTCGTCTAAATGACCTGGTCTTAATTGCAGGGCTTTGCTGCTGGTTTAATGCTGAGCATTTCGTTCCTGGATTTAGCTCATAATGCTATTAATTCAATTGGGTTCTTGAAAGGAAATCTTTGGGTATTTGTCATAAGCCTTGATTGA CACGCGCGCAATCCACTTCCTTTAATCCCTATATATATATTGCGTCGCTTCCGGCGCCAAATTCCTCGCTCATTCTACCATTCACTCACCTCTCTCACTCCTCCGCCTAATACCCCTTCGACATTCGTCTCTGTTCTTACCGTTCTTTCGCCATTTTCTTTCAATTTGGAAGCTGCTTTAAAACCCTCCAATCTTTTCGGGGGGTTTCTTGCTGTTCTTATCGACGCCTTTGAATTGGGGGTACGACCCAAGAAGGCATCCATGGCTTCTCAGGTGTTGGTAGCTCTTGCACTTTCGCTTGTTGGTGGATTCAGTACTTCTCTAGGTGCACTTTTGGTGATTCTTAGCGGTGCCCCAAATCTGAAGATGCTCGGTCTCTTACAGGGCTTTGCTGCTGGTTTAATGCTGAGCATTTCGTTCCTGGATTTAGCTCATAATGCTATTAATTCAATTGGGTTCTTGAAAGGAAATCTTTGGGTATTTGTCATAAGCCTTGATTGA ATGGCTTCTCAGGTGTTGGTAGCTCTTGCACTTTCGCTTGTTGGTGGATTCAGTACTTCTCTAGGTGCACTTTTGGTGATTCTTAGCGGTGCCCCAAATCTGAAGATGCTCGGTCTCTTACAGGGCTTTGCTGCTGGTTTAATGCTGAGCATTTCGTTCCTGGATTTAGCTCATAATGCTATTAATTCAATTGGGTTCTTGAAAGGAAATCTTTGGGTATTTGTCATAAGCCTTGATTGA MASQVLVALALSLVGGFSTSLGALLVILSGAPNLKMLGLLQGFAAGLMLSISFLDLAHNAINSIGFLKGNLWVFVISLD Homology
BLAST of Carg02723 vs. NCBI nr
Match: KAG7035849.1 (Zinc transporter ZTP29 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.5 bits (358), Expect = 1.5e-30 Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0
BLAST of Carg02723 vs. NCBI nr
Match: XP_022957635.1 (zinc transporter ZTP29-like [Cucurbita moschata]) HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Carg02723 vs. NCBI nr
Match: XP_023532613.1 (zinc transporter ZTP29-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Carg02723 vs. NCBI nr
Match: XP_022995122.1 (zinc transporter ZTP29-like [Cucurbita maxima]) HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Carg02723 vs. NCBI nr
Match: KAG6605905.1 (Zinc transporter ZTP29, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.7 bits (330), Expect = 2.7e-27 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy Swiss-Prot
Match: Q940Q3 (Zinc transporter ZTP29 OS=Arabidopsis thaliana OX=3702 GN=ZTP29 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 2.9e-24 Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy Swiss-Prot
Match: Q54LY6 (Protein zntB OS=Dictyostelium discoideum OX=44689 GN=zntB PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-06 Identity = 30/71 (42.25%), Postives = 43/71 (60.56%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy Swiss-Prot
Match: Q9PIN2 (Zinc transporter ZupT OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=zupT PE=3 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.5e-04 Identity = 24/75 (32.00%), Postives = 46/75 (61.33%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy TrEMBL
Match: A0A6J1JXW6 (zinc transporter ZTP29-like OS=Cucurbita maxima OX=3661 GN=LOC111490760 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy TrEMBL
Match: A0A6J1H138 (zinc transporter ZTP29-like OS=Cucurbita moschata OX=3662 GN=LOC111459109 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy TrEMBL
Match: A0A6J1JEJ8 (zinc transporter ZTP29 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483708 PE=4 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.8e-27 Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy TrEMBL
Match: A0A5D3BAW2 (Zinc transporter ZTP29 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001190 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27 Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of Carg02723 vs. ExPASy TrEMBL
Match: A0A0A0L0N7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G290820 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27 Identity = 71/74 (95.95%), Postives = 72/74 (97.30%), Query Frame = 0
BLAST of Carg02723 vs. TAIR 10
Match: AT3G20870.1 (ZIP metal ion transporter family ) HSP 1 Score: 112.1 bits (279), Expect = 2.1e-25 Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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