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Carg02705 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATCCTGAAAGCGTTCCGATGCGGCTGTGGTTAATCAGCAGCTCTCAGATGCTTTCCCTTCACTCCCTCTTCAATCAAAACCATCGCCCGCCATTGTTAGCCACCAAGAAAAGCTCCGATGCTTTGAAGACAAAGAAAGCTCACCCACTTCCTTTCCCTGCTTCTCGTCGCTGTATTGTGTGTTCAAAGGAGACCGACTCACAGCAGTTCGAGGTCGACCCAGACAAGGCCAGGCAGGCCCTTCAAGAGCTCGACCAGCAGCTTCAATCCTTCTCCAAAAAACGAGCCACCCCTCCCAAGAAGAAAGGTATTCCCCCAACTTTTCAATCCTAATTCCAACCAAAATTTGTTGTGCCACTTTGGTTAAAGAATGGACTGAACCGATTAGATGCACATGGTCTTGATTGAATTCTCTTTGAGGAAATGGGTATGATTAGTAACCCTGAAATGATCGAGAGTCGACTAATTAAGGGGTTGATCATAAGTTCATAAGTAACATGGATATGAAAGTTTATGCTCGAAGTGGACAATATCATATAATCGTGGAAGTTTGTGATTACTAACATGGATATCTATAGAACATCTTGTTGGTGGATGAAAGTCCCACATCTGCTCATTCAGGAAATGATTATGGGTTTATAATCAAAGAATACTATCTTCATTAGTATGAGGCAGGTTAGGGAAATCCAAAGTAAAGCCATGAGAGCTTATGCTTAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTACATGGTATTAGAGTCATGTCCTAATATGTCGAACAAATGACTCCACAAGAAAAGGAGTCGAAGTCCTCAAAGGCATAGTCAAAAAATGACTAAGACTCCGAAAGATAAGGAGTCGAGCCTCGACTAAGGGGAGACGTACTTTGTTCGAGGGGAGGTGTTGGTGGATGAAAGTCCCACATCGGTCTTTTGGGGATTGGTACGACATTGAATCGTTACTGAACTTGAAAGTTCTTGATTTATGGTAGCTTAGAGCAAGAAGGGTTGTTGGCATTGGTGTGTATAGAATCTGTTCTTAAGCTGATTTGGAGTGTTTTAAAAAAACAACTTTTGCAGTTGTTGAAGGCACAAAGCTTCCAAGAGATCAAATGAGAGGAGAAATGGCAGAACTTTCAGAGTCCTTTTTAGCAAACTCTGCTGTTGTTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTCTATGCAGTCATAAAGCCCTCCATTGATACTCCACTGCCAAGCTCAATCAGCTCTGAGACACAATCCACTGAGCCACCAGTCTTGCAGCTGCTACCACCTTCATCTCTGTTCATATCCCCCTCACTTCTTACCTAAATCTTTCATCATTCAAGAAATGATATTACACAAATTTAACATGGGTGCTGAATTGTACGAAGAAAAAGTTATGAACATATCAAACTTTTTATAATTTAGCTAGTTTTATACTTAAATGAGAATTCTGTACGTTTTTGTTATAGAAATTAAGTGGTTGTAATT ATCCTGAAAGCGTTCCGATGCGGCTGTGGTTAATCAGCAGCTCTCAGATGCTTTCCCTTCACTCCCTCTTCAATCAAAACCATCGCCCGCCATTGTTAGCCACCAAGAAAAGCTCCGATGCTTTGAAGACAAAGAAAGCTCACCCACTTCCTTTCCCTGCTTCTCGTCGCTGTATTGTGTGTTCAAAGGAGACCGACTCACAGCAGTTCGAGGTCGACCCAGACAAGGCCAGGCAGGCCCTTCAAGAGCTCGACCAGCAGCTTCAATCCTTCTCCAAAAAACGAGCCACCCCTCCCAAGAAGAAAGTTGTTGAAGGCACAAAGCTTCCAAGAGATCAAATGAGAGGAGAAATGGCAGAACTTTCAGAGTCCTTTTTAGCAAACTCTGCTGTTGTTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTCTATGCAGTCATAAAGCCCTCCATTGATACTCCACTGCCAAGCTCAATCAGCTCTGAGACACAATCCACTGAGCCACCAGTCTTGCAGCTGCTACCACCTTCATCTCTGTTCATATCCCCCTCACTTCTTACCTAAATCTTTCATCATTCAAGAAATGATATTACACAAATTTAACATGGGTGCTGAATTGTACGAAGAAAAAGTTATGAACATATCAAACTTTTTATAATTTAGCTAGTTTTATACTTAAATGAGAATTCTGTACGTTTTTGTTATAGAAATTAAGTGGTTGTAATT ATGCGGCTGTGGTTAATCAGCAGCTCTCAGATGCTTTCCCTTCACTCCCTCTTCAATCAAAACCATCGCCCGCCATTGTTAGCCACCAAGAAAAGCTCCGATGCTTTGAAGACAAAGAAAGCTCACCCACTTCCTTTCCCTGCTTCTCGTCGCTGTATTGTGTGTTCAAAGGAGACCGACTCACAGCAGTTCGAGGTCGACCCAGACAAGGCCAGGCAGGCCCTTCAAGAGCTCGACCAGCAGCTTCAATCCTTCTCCAAAAAACGAGCCACCCCTCCCAAGAAGAAAGTTGTTGAAGGCACAAAGCTTCCAAGAGATCAAATGAGAGGAGAAATGGCAGAACTTTCAGAGTCCTTTTTAGCAAACTCTGCTGTTGTTCTCTTCATCTTCTCCATTTTCTACAATGTGCTGTTCTATGCAGTCATAAAGCCCTCCATTGATACTCCACTGCCAAGCTCAATCAGCTCTGAGACACAATCCACTGAGCCACCAGTCTTGCAGCTGCTACCACCTTCATCTCTGTTCATATCCCCCTCACTTCTTACCTAA MRLWLISSSQMLSLHSLFNQNHRPPLLATKKSSDALKTKKAHPLPFPASRRCIVCSKETDSQQFEVDPDKARQALQELDQQLQSFSKKRATPPKKKVVEGTKLPRDQMRGEMAELSESFLANSAVVLFIFSIFYNVLFYAVIKPSIDTPLPSSISSETQSTEPPVLQLLPPSSLFISPSLLT Homology
BLAST of Carg02705 vs. NCBI nr
Match: KAG7035867.1 (hypothetical protein SDJN02_02666 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 342.0 bits (876), Expect = 3.1e-90 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Carg02705 vs. NCBI nr
Match: XP_022996085.1 (uncharacterized protein LOC111491401 [Cucurbita maxima]) HSP 1 Score: 328.9 bits (842), Expect = 2.7e-86 Identity = 175/182 (96.15%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Carg02705 vs. NCBI nr
Match: KAG6605919.1 (hypothetical protein SDJN03_03236, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 328.6 bits (841), Expect = 3.5e-86 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of Carg02705 vs. NCBI nr
Match: XP_023533692.1 (uncharacterized protein LOC111795475 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 325.5 bits (833), Expect = 3.0e-85 Identity = 174/182 (95.60%), Postives = 175/182 (96.15%), Query Frame = 0
BLAST of Carg02705 vs. NCBI nr
Match: XP_038901592.1 (uncharacterized protein LOC120088397 [Benincasa hispida]) HSP 1 Score: 243.8 bits (621), Expect = 1.1e-60 Identity = 139/185 (75.14%), Postives = 155/185 (83.78%), Query Frame = 0
BLAST of Carg02705 vs. ExPASy TrEMBL
Match: A0A6J1K5Q9 (uncharacterized protein LOC111491401 OS=Cucurbita maxima OX=3661 GN=LOC111491401 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.3e-86 Identity = 175/182 (96.15%), Postives = 177/182 (97.25%), Query Frame = 0
BLAST of Carg02705 vs. ExPASy TrEMBL
Match: A0A0A0KH36 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G439950 PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 2.6e-55 Identity = 128/175 (73.14%), Postives = 144/175 (82.29%), Query Frame = 0
BLAST of Carg02705 vs. ExPASy TrEMBL
Match: A0A5D3BB07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G001000 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.9e-53 Identity = 125/175 (71.43%), Postives = 140/175 (80.00%), Query Frame = 0
BLAST of Carg02705 vs. ExPASy TrEMBL
Match: A0A1S3BNA1 (uncharacterized protein LOC103491505 OS=Cucumis melo OX=3656 GN=LOC103491505 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.9e-53 Identity = 125/175 (71.43%), Postives = 140/175 (80.00%), Query Frame = 0
BLAST of Carg02705 vs. ExPASy TrEMBL
Match: A0A6J1D5V3 (uncharacterized protein LOC111017318 OS=Momordica charantia OX=3673 GN=LOC111017318 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 3.0e-51 Identity = 122/176 (69.32%), Postives = 136/176 (77.27%), Query Frame = 0
BLAST of Carg02705 vs. TAIR 10
Match: AT2G01870.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 11 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10 Identity = 45/115 (39.13%), Postives = 68/115 (59.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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