Carg02681 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02681
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	AvrRpt-cleavage domain-containing protein
Location	Carg_Chr02: 7438699 .. 7440016 (+)
RNA-Seq Expression	Carg02681
Synteny	Carg02681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATACTCGGGCGGAGGTCAGCATTTTAAACTCTTATCTCGTACGACTTTAAAATTATCTCGTGGTTCAAAGTTTTGATCTTAAATTTTAATTTTTTATTGTTTAGATTACGCTTTTTTTGAATCTTCTCGTTTTAATTCATCTTGAACGATGATATATTTGTAGTAGTGTTATTAAGATTTTGAAAGAAAGAAAAATAAACATTTAGAAAATAAGTGTGGCTCATGGTTGTAATAAACTATATCGTAAGATTATTAAACCTAAAATCACTGTAGTAATGGTCTGGAACGTCGTGATGATGACAACTTCAAACACCTACATAGATTAAGTCTAAAAGTAACGATATGCAAATAGGTAACTTTTCTTCCAATACTGTAAGCTTTTTTCTACCATGGTAGTCTTGATATATTTACGAATGATATGTTTTCACCACTCCATAATCACTTCCAACCATGTTCCAAATGTCAAAGATAATATCGAAACTTTTAAAATAATACAAGTATTTTTTAAACATGAGACACAAATTCAATGTATTTTGTAAGATCCCACGTATTTCTTACAAGGGTGTAGAGACCTCTCCCTAAAAGAGGCATTTTAAAAACATAACGAGTCAGGTCAAAGCAGACAATATCTATTAGCGGTGGGCTTGGACGGTTACATATTCTTTCTATAACGACCAATATTTTTCTTTTTTTTTTATCGTAATTCAAGAGATCCTTGTATTTTATCATAAAAAAGCACCAGAATGGATACAAATCAATCAAAATCACAAATTCAAAAGCTGAAAGTTTTGTTGGTGTGTGTGTGTGTGTACAGAAAAACAATAGGTGGAAATCTGTTCCAGAGTTTGGGGGATGGGATCACAACGCACCTGGGGCAAGCAATTATTCTGTTGTATTCTCTCAAGCTCGTGCAAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAGCCAGCCTTGGAAATGAGAGGGAGATGATGGCAATGGCAGATAAACATCTTCGCCAACAGAACCACCACCACCACCGCCACCACAGCCACAACAGCCACCACAGCCGCTATGAACACCACCCACAATATCAACATCGTCTTCGCCCCCACCAGCACGACCCTGTTGTCCCGGTAAGCACTTTCATCTGCTGCATCCCCTGTTCTTTTCCTACCTTAATCTCTAAAACAGATCTTTAGAAGCAAAGCTAAATTGAAAAATAAATAGCATACATACATCTAATCCTTGCTCTTTTATTTCTCTTATTCAGCAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA

mRNA sequence

ATGGATACTCGGGCGGAGAAAAACAATAGGTGGAAATCTGTTCCAGAGTTTGGGGGATGGGATCACAACGCACCTGGGGCAAGCAATTATTCTGTTGTATTCTCTCAAGCTCGTGCAAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAGCCAGCCTTGGAAATGAGAGGGAGATGATGGCAATGGCAGATAAACATCTTCGCCAACAGAACCACCACCACCACCGCCACCACAGCCACAACAGCCACCACAGCCGCTATGAACACCACCCACAATATCAACATCGTCTTCGCCCCCACCAGCACGACCCTGTTGTCCCGCAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA

Coding sequence (CDS)

ATGGATACTCGGGCGGAGAAAAACAATAGGTGGAAATCTGTTCCAGAGTTTGGGGGATGGGATCACAACGCACCTGGGGCAAGCAATTATTCTGTTGTATTCTCTCAAGCTCGTGCAAATAGGAAACAGCAAAAAACTGACTTAACTGAGTTCAAAAGAGCCAGCCTTGGAAATGAGAGGGAGATGATGGCAATGGCAGATAAACATCTTCGCCAACAGAACCACCACCACCACCGCCACCACAGCCACAACAGCCACCACAGCCGCTATGAACACCACCCACAATATCAACATCGTCTTCGCCCCCACCAGCACGACCCTGTTGTCCCGCAGAAGAAAAAGAAGATTCTGACCTACATCAATTGTTGTATCAGGCCTTGA

Protein sequence

MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYINCCIRP

Homology

[Close]

BLAST of Carg02681 vs. NCBI nr
Match: KAG6605945.1 (hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035891.1 hypothetical protein SDJN02_02690, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 2.6e-64
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER
Sbjct: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60

Query: 61  EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI 120
           EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI
Sbjct: 61  EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI 120

Query: 121 NCCIRP 127
           NCCIRP
Sbjct: 121 NCCIRP 126

[Close]

BLAST of Carg02681 vs. NCBI nr
Match: XP_038901151.1 (lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-37
Identity = 90/128 (70.31%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           M  R EK NRW+SVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKR SLGNER
Sbjct: 1   MAARTEK-NRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNER 60

Query: 61  EMMAMADKHLRQQNHHHHRHHSHN--SHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILT 120
           E+MA   K  R Q HHHHRHH H+   H  +++H   + HR +P   D VVPQKKKKILT
Sbjct: 61  ELMAATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVVPQKKKKILT 120

Query: 121 YINCCIRP 127
           YINCCIRP
Sbjct: 121 YINCCIRP 127

[Close]

BLAST of Carg02681 vs. NCBI nr
Match: XP_038901152.1 (lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 160.2 bits (404), Expect = 1.1e-35
Identity = 89/128 (69.53%), Postives = 100/128 (78.12%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           M  R EK NRW+SVPEFGGWDHNAPGASNYSVVF+QARA+RKQ+KTDLTEFKR SLGNER
Sbjct: 1   MAARTEK-NRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQRKTDLTEFKRTSLGNER 60

Query: 61  EMMAMADKHLRQQNHHHHRHHSHN--SHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILT 120
           E+MA   K  R Q HHHHRHH H+   H  +++H   + HR +P   D VVP KKKKILT
Sbjct: 61  ELMAATGKCHRHQKHHHHRHHHHHEQQHQHQHQHRHHHHHRHQPPADDSVVP-KKKKILT 120

Query: 121 YINCCIRP 127
           YINCCIRP
Sbjct: 121 YINCCIRP 126

[Close]

BLAST of Carg02681 vs. NCBI nr
Match: XP_022985819.1 (dendritic arbor reduction protein 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 147.9 bits (372), Expect = 5.9e-32
Identity = 84/126 (66.67%), Postives = 96/126 (76.19%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+
Sbjct: 1   MDSRTE--NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 60

Query: 61  EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI 120
           E+MA+ADKH R   HHH R H H  HH R  HHP   H  +      VV QKKKKIL+ +
Sbjct: 61  ELMAIADKHDRHHQHHHRREHRHQHHHHR--HHP---HHGQLPADGAVVGQKKKKILSCM 119

Query: 121 NCCIRP 127
           +CCI+P
Sbjct: 121 SCCIKP 119

[Close]

BLAST of Carg02681 vs. NCBI nr
Match: XP_022985820.1 (dendritic arbor reduction protein 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31
Identity = 84/126 (66.67%), Postives = 95/126 (75.40%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+
Sbjct: 1   MDSRTE--NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 60

Query: 61  EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI 120
           E+MA+ADKH R   HHH R H H  HH R  HHP   H   P   D  V  KKKKIL+ +
Sbjct: 61  ELMAIADKHDRHHQHHHRREHRHQHHHHR--HHP--HHGQLP--ADGAVVGKKKKILSCM 118

Query: 121 NCCIRP 127
           +CCI+P
Sbjct: 121 SCCIKP 118

[Close]

BLAST of Carg02681 vs. ExPASy TrEMBL
Match: A0A0A0KK09 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G430670 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.1e-36
Identity = 84/129 (65.12%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 6   EKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNEREMMAM 65
           ++NNRW+SVPEFGGWDHNAPGASNYSVVF+QARA+RKQQKTDLTEFK+ SLGNE+E+M  
Sbjct: 5   KENNRWRSVPEFGGWDHNAPGASNYSVVFTQARADRKQQKTDLTEFKKTSLGNEKELMEA 64

Query: 66  ADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQH--------DPVVPQKKKKIL 125
            DKH R Q H HHRH   + HH  ++H   ++H+   HQH        D V P+KKKKIL
Sbjct: 65  VDKHHRHQKHRHHRHRHRHHHHHHHDHDHDHEHQHHHHQHHHQSPPGDDSVGPEKKKKIL 124

Query: 126 TYINCCIRP 127
           TYINCCIRP
Sbjct: 125 TYINCCIRP 133

[Close]

BLAST of Carg02681 vs. ExPASy TrEMBL
Match: A0A6J1JEB9 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.8e-32
Identity = 84/126 (66.67%), Postives = 96/126 (76.19%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+
Sbjct: 1   MDSRTE--NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 60

Query: 61  EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI 120
           E+MA+ADKH R   HHH R H H  HH R  HHP   H  +      VV QKKKKIL+ +
Sbjct: 61  ELMAIADKHDRHHQHHHRREHRHQHHHHR--HHP---HHGQLPADGAVVGQKKKKILSCM 119

Query: 121 NCCIRP 127
           +CCI+P
Sbjct: 121 SCCIKP 119

[Close]

BLAST of Carg02681 vs. ExPASy TrEMBL
Match: A0A6J1JCC4 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111483749 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.8e-31
Identity = 84/126 (66.67%), Postives = 95/126 (75.40%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+
Sbjct: 1   MDSRTE--NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 60

Query: 61  EMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTYI 120
           E+MA+ADKH R   HHH R H H  HH R  HHP   H   P   D  V  KKKKIL+ +
Sbjct: 61  ELMAIADKHDRHHQHHHRREHRHQHHHHR--HHP--HHGQLP--ADGAVVGKKKKILSCM 118

Query: 121 NCCIRP 127
           +CCI+P
Sbjct: 121 SCCIKP 118

[Close]

BLAST of Carg02681 vs. ExPASy TrEMBL
Match: A0A6J1FT95 (dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.5e-30
Identity = 83/127 (65.35%), Postives = 95/127 (74.80%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+
Sbjct: 1   MDSRTE--NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 60

Query: 61  EMMAMADKHLRQQNHHHHRH-HSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTY 120
           E+MA+ADKH R   HH HRH H H   H    HHP   H  +      VV QKKKKIL+ 
Sbjct: 61  ELMAIADKHDR---HHQHRHRHEHRQQHHHQRHHP---HHGQLPVGGAVVGQKKKKILSC 119

Query: 121 INCCIRP 127
           ++CCI+P
Sbjct: 121 MSCCIKP 119

[Close]

BLAST of Carg02681 vs. ExPASy TrEMBL
Match: A0A6J1FX29 (dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448272 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.9e-29
Identity = 83/130 (63.85%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNER 60
           MD+R E  NRWKSVPEFGGWD+N P ASNYSVVFS+ARAN+KQQKTDLTEFKRASLGNE+
Sbjct: 1   MDSRTE--NRWKSVPEFGGWDNNTPDASNYSVVFSRARANKKQQKTDLTEFKRASLGNEK 60

Query: 61  EMMAMADKHLRQQNHHHHRH-HSHNSHHSRYEHHPQYQHRLRPHQHDPV---VPQKKKKI 120
           E+MA+ADKH R   HH HRH H H   H    HHP        H   PV   V  KKKKI
Sbjct: 61  ELMAIADKHDR---HHQHRHRHEHRQQHHHQRHHPH-------HGQLPVGGAVVGKKKKI 118

Query: 121 LTYINCCIRP 127
           L+ ++CCI+P
Sbjct: 121 LSCMSCCIKP 118

[Close]

BLAST of Carg02681 vs. TAIR 10
Match: AT5G19473.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 85.5 bits (210), Expect = 3.3e-17
Identity = 58/127 (45.67%), Postives = 74/127 (58.27%), Query Frame = 0


Query: 1   MDTRAEKNNRWKSVPEFGGWDHNAPG-ASNYSVVFSQARANRKQQKTDLTEFKRASLGNE 60
           MD R E N  W  VP+FGGWD   P  A+NYSVVFS+ARANRKQ K  +   + +SLG+E
Sbjct: 1   MDKRRE-NAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGV---RHSSLGSE 60

Query: 61  REMMAMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILTY 120
           +E+M    ++ +Q    HHRH + +                     DPV+  KKK+ILTY
Sbjct: 61  QELMVSVRRNHQQL---HHRHETQDD--------------------DPVM--KKKRILTY 98

Query: 121 INCCIRP 127
           INCCIRP
Sbjct: 121 INCCIRP 98

[Close]

BLAST of Carg02681 vs. TAIR 10
Match: AT5G09960.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.5e-06
Identity = 43/130 (33.08%), Postives = 61/130 (46.92%), Query Frame = 0


Query: 2   DTRAEKNNRWKSVPEFGGWDHNAPGA-SNYSVVFSQARANRKQQKTDLTEFKRASLGNER 61
           D R EKN  W SVP+FG WD    G   +YS+ F++ R  RKQ K D +   RASLGNE 
Sbjct: 3   DDRKEKNTPWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPS---RASLGNEE 62

Query: 62  EMM-----AMADKHLRQQNHHHHRHHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKK 121
           E++     A +   L      + R  S + HH             +PH      P  ++ 
Sbjct: 63  ELIKPPESATSTAELTTVQSENQREFSPSHHH-------------QPHS-----PSTRRS 111

Query: 122 ILTYINCCIR 126
           + +  NCC++
Sbjct: 123 MFSCFNCCVK 111

[Close]

BLAST of Carg02681 vs. TAIR 10
Match: AT5G64850.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 2.9e-05
Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 0


Query: 2   DTRAEKNNRWKSVPEFGGWDHNAPGASNYSVVFSQARANRKQQKTDLTEFKRASLGNERE 61
           D +  KN+ W SVP+FG WD    G+ +YS+ FS+ R  RK  K D +   RASLGNE E
Sbjct: 3   DRKENKNSPWLSVPQFGDWDQKG-GSIDYSMDFSKIREMRKLNKRDAS---RASLGNEEE 62

Query: 62  MMAMADKHLRQQNHHHHR---HHSHNSHHSRYEHHPQYQHRLRPHQHDPVVPQKKKKILT 121
           ++               +    HS N++ + + HH         H H    P ++++I +
Sbjct: 63  LINPFHDQPPVDTAKPKKLTTVHSDNNNRNEFSHH---------HPHS---PSRRRRIFS 113

Query: 122 YINCCIR 126
             NCC++
Sbjct: 123 CFNCCVK 113

The following BLAST results are available for this feature:

BLAST of Carg02681 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605945.1	2.6e-64	100.00	hypothetical protein SDJN03_03262, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038901151.1	1.2e-37	70.31	lateral signaling target protein 2 homolog isoform X1 [Benincasa hispida]	[more]
XP_038901152.1	1.1e-35	69.53	lateral signaling target protein 2 homolog isoform X2 [Benincasa hispida]	[more]
XP_022985819.1	5.9e-32	66.67	dendritic arbor reduction protein 1 isoform X1 [Cucurbita maxima]	[more]
XP_022985820.1	3.8e-31	66.67	dendritic arbor reduction protein 1 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg02681 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg02681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KK09	1.1e-36	65.12	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G43...	[more]
A0A6J1JEB9	2.8e-32	66.67	dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1JCC4	1.8e-31	66.67	dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FT95	3.5e-30	65.35	dendritic arbor reduction protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1FX29	2.9e-29	63.85	dendritic arbor reduction protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of Carg02681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G19473.1	3.3e-17	45.67	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G09960.1	3.5e-06	33.08	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G64850.1	2.9e-05	32.28	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 12..42 e-value: 4.8E-8 score: 32.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..88
None	No IPR available	PANTHER	PTHR33882	PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN	coord: 3..125
None	No IPR available	PANTHER	PTHR33882:SF11	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 3..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02681-RA	Carg02681-RA	mRNA