Carg02665 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02665
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionReplication factor C subunit 1
LocationCarg_Chr02: 7519357 .. 7526198 (-)
RNA-Seq ExpressionCarg02665
SyntenyCarg02665
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGAAGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTCGCTGATCTTATTGCAAGCATTAAAAGCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGCTACAGCCAGAAGTTGAAAAGCCTTGTGAACTATTGTCTGATTCTCAGTTTTAGAAAACCTACAAAACAACAGGTTTTATGAAGATCTTTCTTGGTTTATTATCTATTACTCCTCCCTCGTTCATGGGTGACATCCTGTGTTTGAATTAAAGAACGACTCTGCATCATCAATTTCTCTGTTGTATTTTTCTGAGTTGCCCCAAAATATTGCAATAATTCACAAGTAAATAAACTTTCTTCTAATGTTACAAAGACGTTTTCATTAAATTGGATTGGCGACTTCAGAAAAAAAAAAAAAATCATGTTTGGTCAGTAGTAAGTAGCTGTCTCATATACTTGCCTCTGCATGTTTTTTTTTTGTTCCTTTTTAATAGATTTTCTCTCTCATCCAAAAAGAAAATAAAGAAAGATTATATCATCACTTGTATAGTCTCAAGTATGGACAGTTTTTGATCCTTTACCTGTGCCCCTTCATGTCCTTCATGTCTTCTGGTAGATTACAGTTTATGATTTTAGCTCAACCCTTTCTTTACATTCTTGGGCTAATATACAAAGCTCTGATAGAAGTTAGTTTGACCTGTTCTAGATGGCAAAAAGATTGAGTCAAGTTGCAAATGCAGAAGGACTTCAAGTTAATGAGGTAAACACTTCATATTTGACTTTGATTACGGCTGTTCATTTAGTTGGAGTGGGTTGTATGCATGCTTGGTTATAGCATCTTGATTCTTGATAATTACTACGGGTTCAGATTGCTCTTGAGGAACTTGCAGAAAGAGTGAATGGGGATATACGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCAATGTCTGTTATTAAATATGATGATATTCGCCAACGACTTCTGGGCAGTATGAAAGATGAAGACATCTCGCCGTTCACTGCTGTTGATAAGTATGCACATATCAATCCATCTTACCCCACTTCTATACTTTTATATGTGGCTAAGCCTTTCTGGATGCTGTATCTGGTCTGTTCTATTCGTGGAGCAATAATATATAATCCTTGCTATATCTTCAATATGAGCTGGTTGGTGTTGTCTTATGGCTGTACGTGTGTTTTTCATAATCTTTACTCCCTTGCTTGCGGAAAAGCTGATATTGTGGTTACAGTTTTTCACGACTGGAAGGCATTCTATTTGCAGTTTTGTGGGTGGGATTCTGTCTTCTAACTTCCCTTAGGTTGTTTTGCCTCTGGTTTTAATTTATTTCTTGGTTGCGTATTAAAAGGAAAAGGAAAAGAAGTATAATTCACGTTTTAGTTGTGAAGATATCATGACTATTTAGTACGAATTTGTTCCTCTTCCATGTGCAGGTTATCCTTTTATGTGGTTGGAAAGAAATTAGAGGATTTTTCTAGAGAAGTTTGGGGTTCAGTTATTTGTAGGGTTTTTTTTTTTTTATATAGAAACAAAACTTTTCTTTGAAAAGATGAAAATAGACCAATGCTCAAAATTCACAAGGGAGTGAATAGAAAATAAAACAATGAGAATTGAATAGGATAAGTAAAAGTGTGCCAAATTGTATTAATATCATATAACGAAAATTCCGTGGAAGACTTGAAAAGAGTGCACCAAGCCTTTAAATGAGCAGAATCAAAACAATCAAACCATGATAAATGTTTGTCTTCATTTTTTTTTTTAATAGTTCCATTCAAATTTCCGAGAAGATGATGTTCACTCTCTGGTGTGCTAATTATGTCCTTTCAGTTGAAAAGTCTTTATTAATTCCTTGGAAGCTTTTGTATGGTTCACTTTTGCAATGGAATATAGTTACTTATCAAAAGAAAAATAAATCGTTCCTCTTGGATGTTAGAATTTCAAGGTCGGTTTTATTTTTTGGCTGCATTTATTTATTTCTGCATTTTCACTTGTAGGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATAGACCTCAGCATGAGTGATATGGATCTAGTCCCTCTTCTTATTCAGGTATATTTCTTTGTTTTAATTGTGATGTAATCTACTCTTTTGTGTACTGTTCTTTTAGTTGATTCTCTCTTTTACTGTGGCTTTACCGTGACTTTAATCTTCTTTTATTGCTGCATTTTAGTTTGAAGCTTTTCACTGCTGTTGACCGAGTTACTTGGCTAGTTACTGTTAGTTCTTAAGTGTAAGGCTATAATCTTTACAACTTTTAGTTTTACTGCTATCATTTGGCTTACTGTTGCCAATGACTTGGAGGCTGGTTTATATCCTTTTAAATAAGGTCCTTGGGTTGTAAGAAGGACTATTCGTTAAAGCTTCGATTCAAGAACCCTCCAAGATTAGTCCTTCACTAAATAGGTACTTGTACGTCTACACTTGTACTAAATCCAGAAAGAGTTCTTGAGTGAAATTTTAGATGTAGAACAACTCGATTTAGGGTTTAATTTGTCCACCTTCCTCGTACGGGGTCTCAGCTTCAGCATTTGTCCTCATTCATGATCTTATTCTTTGGGCCTGATTTGAAAAAGCTCCTCTCTCCGATGGGTTTGCTTCAGTAGCCATGTATCATCACCGCTACCGTCATCAACATCACCTCCTTTCTCGGTCATTGTTTTTGTTGCCAACCAAAGAATCCTCAGCTTCTTTTTTTGCCTTATTTCAATTTTTGGTTTTTTTTTTTTTTTTTTTTTGGCTGAAATGAGTTGTTGTATTGTAATAAGTACTTTAGCATTTGGTTTAAAGATGGTGTGTTCTTTGTTCAAGATATGAAGAACAAGTCGATCGTTCCTCTCTCTATCACATTTGTGTTGGTTGGAAGGTGCGCTTGTGGATCTTTTGCTTCTTTAAGTGGGAAATTCTCAAGCAAACTAGAGATGATAGTGATATAATTTGTTTGTCAAAACGAAGGTTTTATTCTGGTTGGTTCATAGATTTCATTGTATTCTATTTTTGCAGTTCGAGTTTTGGGAATTTTGCTCTTGAAGTTTCTAAGTTGGATTGTTAATTTCTGGAGGAGGCTTTTAGCCAACTTTTTCTTGTTTTGGTTCTTTATTATTCTTATTTTCTGTTGTTGTTCAAGTTCAATTTGGAGCTAAGGTTTGGTTTACTCTTTTGTTTGTAATCGTTTTATGGTCTTATTTGTTTTTTGGTTCTATTTTCTTTTTCACTCTCTAGGGGAGTTTATATCCTTAGAACGTTATTTTCATTATATCAGTGAGAAGTTATTTCTTGTTAATAAGATAAAATACCACGATTTTTAGGGAAAATTTATGTGTTTGTAAATGCTTGACTGGAGTTAAGAATTTTACTTATGGCTAGTTATAGAAGCCTAGATCTCTAGGAGCCTTTCTTTTTGTACTTTACTTCTAGACTGTGTTACTTTTTCTTTATTGAAAATCTAAGAGGTTACAAAACTGAAACAACTTGATTCCTATGAGGTATAACATTTGAGGAATTTTTTGTAGTTCTCCATGGCTTGGGTTTGGGTTCCCCCACCCCCTCATTGGCTTTATTTCGTTTTATTAAAAAAAAAAAAAAAAATCCCTGTTTATTTGAAAAAAAAAATCATTTAAGTTGAGGGTTATATTTTGCATGTGAATATAATCTATCTTTCAACCGGTTTTGTCACTTTATACTTCAAACGTAGGATTTTCAAAACCTGTTACTCAGGCAGGCCATTTATGTTGACGAACCTGGCATTATATTTGCTTACAGGAAAATTATATTAATTATAGACCAAGCTCTGTTAGTAAGGATGACAATGGGATCAAACGGATGGATTTGATGGCCCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGACATCGACAGTGGCAACTCTCTCAAAGTAGCTCAATTGCTTCTTGTGTAATCCCGTAGGTTTCATGACTTCACCTCCAAGCATCTGATGCGTATTTATACTAACGTTACCATTCATTATTGATCTTTATATAATTCTTTCTGTGATAGAGCTTCATTATTGCATGGGCAAAGAGAAACACTTGAGCAGGTGATGAAATTCTGTACATGCAAGTTTTAAGGTTTTGAAATTTTTTTTTGTTCTTTAAATGATCTATGATTAAGGAAAATGAGTAATTGTCATATGTTTTGGACGTATTAAAAAATAGTTATTGTCTATGAGTTGGTAGAATTTGACCAGTAGATTTTATCTCGTAGTTTTTGTTTAGAGTATGAGTGAATCATGTATTTGATATGTATAGCAATATTCCACCCGAGTAAGAACACTTATTCTAGGATAACGTGTTTGTATCTCCAGCTTTTAGCTCTGTTTTTACCATTGAAACTTGCTCTTATGCTGATATTCTGGCCTGAGATCAAACTGATATTCTCAAGTATACTGGCGTTAATTTGTTGCGCCTCTGCATGCCGTTTTACATTGATCATAATTGAACATTCATTTGCTGTTTTCTTTTGCAAATGTGTGTTGTTCGTAGGAACCTACATTTTTTTCTTTTGGCATAATGATCATGGAGAGTCATGGGTTTTCCAATGAGTATATAGATTAGTGAGTGAAAGTTCAGCTCAGTTTCTTTTCAATGTCGAACCCTCAGAGCGTAATTTCAAGGGTATGTGTGCCATTTTAGATTATACTAAAGTTCACTTGTGCATTAATCATGCAGGGAGAGCGTAATTTTAATAGATTTAGTGCATGGCTGGGAAAAAATTCTACTTTTGGAAAAAATATGCGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAGTCCTGTTCTAGGAGGTAATTTATTATACTTCCTTTATGGATATTCCCTCAGTCAAAGTTGCAACGTTAGATACCTTCTCAATTAAATATCTTCCGATTATGTGCTTGTTTTGTTCTACTTTTTAGTTAAAAAAAATCTCTATTTCTAGTGGCTTAGTAATCAATTTAGACTTCTGCATAAGAAAGATAGACTAGGTCACTGAGATATAGCATGACAAGAGAAGTTCCCAGATTTAAATTTTTTTACAGATTCTGATATCATCCTAATGGTTAGGAGAAAAGCCTTCAATTCAATCTAAGGGGGTAGGCCCACCCCACTAAATCCCCTTATCATTTGAAGGGTATTCTAAGTTTCGGGTTCTGCTTCTTCCTTTCAAAAACATTCCCAAATATATGCCCTTCTTGCCTGTTCTGAAATCTAAGCTGGTTTGTCCACGTTCATATTTGAAAACTTCTTTAAAAAAAAATTTATGTAGAATACGCATGTAAGCTGCTGCTTAGCCCACTCTTTTTATGTGCATGTGTGTCATCAGTTGCAAGCTTTAACACTTCTATTCAAAATAACACAGGGAACACCTACGAGTTGAGAACCTTACCCTATTTCTGAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGTTAGAATATACTTTTCTTTCCTGATTTTACCTTTAGGAATGGTATTTTTGGGAGGCATAATGGTTAAATTAACCATTTTTTTTCTTTCAAATGATATGATTACCAGGATGAAGCTGTTAAAATGGTTGTAGATTTTATGAGTCTATATTCGATCAATCAAGAGGATTTTGATACTGTTATGGAGTTGTCAAAATTTCAGGTACCGATATCTACTTTTTTGTTCAGAGGTATCGTGGTTGCTATACTAGCTGCCTTTCCTTTTAGCTTAGATTTCTTACAGATGGTTCTCCAAATCAGGGTCGTAAGAATCCATTGGATGGCGTGGCCCCTGCTGTCAAAGCTGCTCTAACAAAGGCATATAAAGAAGCAAGAAAGACACAGATGGTGCGGACTGCAGACCTCATTACACTTCCTGGAATTAAAAAGGCCCCTAAGAAGCGAATTGCAGCAATGCTAGAACCGGCTGAGGATACAGTCGAGGGCAATGGTGGAGACACATTGGCAGAAAGTGACGATGAGAACTCTTTGGACAACGAAGACGCAGGTAAGATCTGATATTTCCTTGCTTATGTCAACCAAGCCATTTGTTTTTGTAGGGTAAATTCCACTTCTCTAATGGACAAATTTTCTTTCTGGATTGCTATTTTAGAAGATTCAACAAACGCTGAGAAGAAGCTGCAACTGGAACTTCAAAACTTGAAGAAGGAAGGTACCTGTCTTTCTTTGCTTCTAGTTTGTTTAAAATGCGAAGCCTTTCTTACTTATGAACTTATATTCGTTCTTGCTATTAATATATTTTATATTTTGTTAGGAATGGAAGTGCAGCTAGATTTGAAAGGTGTGGAAAATTCAAACGCCAAGAAACCTGGTGGCAGAGGAAGAGGAGGTGGTTCCCAGGCTTCAGAGAAGAAAGGTGGGGGGCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGAAATTAAACGCTCTTCTAGGACTTCTTCTGGTAATGTTATGATGATCTGTGTAGCGTTTTTGCTTCATCCCATGCATGCACAACTTTTGCTGGTTAATGTGTTTGAACCGCTAGAGGAATTCATAACCTTGTATTTGCTGCATTGGGCCTTTTTGTCGTATAACATAAACGCTTTTGTATCAGCCATTTTGGCTTTTAGACCAATAGGGTTGGAAATTCCTGATTGTTCAAAGGTTACTTTTGTATCTTTGTCCAGAAAGATGCATAATCTACCTAACATGGAAAAAGAACACTTCATAACCAAAAGTTCATATTGCCTTTTCATCCACTTAACAAAACAGGCGAGAAAATAGCAAAGGAAAATTTCAGAAAGAATTTT

mRNA sequence

ATGGATGAAGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTCGCTGATCTTATTGCAAGCATTAAAAGCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGCTACAGCCAGAAGTTGAAAAGCCTTGTGAACTATTGTCTGATTCTCAGTTTTAGAAAACCTACAAAACAACAGATGGCAAAAAGATTGAGTCAAGTTGCAAATGCAGAAGGACTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTGAATGGGGATATACGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCAATGTCTGTTATTAAATATGATGATATTCGCCAACGACTTCTGGGCAGTATGAAAGATGAAGACATCTCGCCGTTCACTGCTGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATAGACCTCAGCATGAGTGATATGGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGACCAAGCTCTGTTAGTAAGGATGACAATGGGATCAAACGGATGGATTTGATGGCCCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGACATCGACAGTGGCAACTCTCTCAAAGTAGCTCAATTGCTTCTTGTGTAATCCCAGCTTCATTATTGCATGGGCAAAGAGAAACACTTGAGCAGGGAGAGCGTAATTTTAATAGATTTAGTGCATGGCTGGGAAAAAATTCTACTTTTGGAAAAAATATGCGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAGTCCTGTTCTAGGAGGGAACACCTACGAGTTGAGAACCTTACCCTATTTCTGAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGATGAAGCTGTTAAAATGGTTGTAGATTTTATGAGTCTATATTCGATCAATCAAGAGGATTTTGATACTGTTATGGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCATTGGATGGCGTGGCCCCTGCTGTCAAAGCTGCTCTAACAAAGGCATATAAAGAAGCAAGAAAGACACAGATGGTGCGGACTGCAGACCTCATTACACTTCCTGGAATTAAAAAGGCCCCTAAGAAGCGAATTGCAGCAATGCTAGAACCGGCTGAGGATACAGTCGAGGGCAATGGTGGAGACACATTGGCAGAAAGTGACGATGAGAACTCTTTGGACAACGAAGACGCAGAAGATTCAACAAACGCTGAGAAGAAGCTGCAACTGGAACTTCAAAACTTGAAGAAGGAAGGAATGGAAGTGCAGCTAGATTTGAAAGGTGTGGAAAATTCAAACGCCAAGAAACCTGGTGGCAGAGGAAGAGGAGGTGGTTCCCAGGCTTCAGAGAAGAAAGGTGGGGGGCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGAAATTAAACGCTCTTCTAGGACTTCTTCTGGTAATGTTATGATGATCTGTGTAGCGTTTTTGCTTCATCCCATGCATGCACAACTTTTGCTGGTTAATGTGTTTGAACCGCTAGAGGAATTCATAACCTTGTATTTGCTGCATTGGGCCTTTTTGTCGTATAACATAAACGCTTTTGTATCAGCCATTTTGGCTTTTAGACCAATAGGGTTGGAAATTCCTGATTGTTCAAAGGTTACTTTTGTATCTTTGTCCAGAAAGATGCATAATCTACCTAACATGGAAAAAGAACACTTCATAACCAAAAGTTCATATTGCCTTTTCATCCACTTAACAAAACAGGCGAGAAAATAGCAAAGGAAAATTTCAGAAAGAATTTT

Coding sequence (CDS)

ATGGATGAAGTAGATGGAATGTCTGCTGGAGATAGGGGTGGAGTCGCTGATCTTATTGCAAGCATTAAAAGCTCCAAAATTCCAATTATCTGCATCTGTAATGACCGCTACAGCCAGAAGTTGAAAAGCCTTGTGAACTATTGTCTGATTCTCAGTTTTAGAAAACCTACAAAACAACAGATGGCAAAAAGATTGAGTCAAGTTGCAAATGCAGAAGGACTTCAAGTTAATGAGATTGCTCTTGAGGAACTTGCAGAAAGAGTGAATGGGGATATACGTATGGCACTAAATCAGTTGCAGTACCTGAGTCTGTCAATGTCTGTTATTAAATATGATGATATTCGCCAACGACTTCTGGGCAGTATGAAAGATGAAGACATCTCGCCGTTCACTGCTGTTGATAAGCTGTTTGGTTTTAATTCTGGGAAGTTAAGGATGGATGAACGGATAGACCTCAGCATGAGTGATATGGATCTAGTCCCTCTTCTTATTCAGGAAAATTATATTAATTATAGACCAAGCTCTGTTAGTAAGGATGACAATGGGATCAAACGGATGGATTTGATGGCCCGTGCAGCTGAATCTATTGCAGATGGGGATATAATCAATGTACAGATTCGAAGACATCGACAGTGGCAACTCTCTCAAAGTAGCTCAATTGCTTCTTGTGTAATCCCAGCTTCATTATTGCATGGGCAAAGAGAAACACTTGAGCAGGGAGAGCGTAATTTTAATAGATTTAGTGCATGGCTGGGAAAAAATTCTACTTTTGGAAAAAATATGCGGCTTTTGGAGGATTTGCATGTTCACATTCTTGCTTCTCGCGAGTCCTGTTCTAGGAGGGAACACCTACGAGTTGAGAACCTTACCCTATTTCTGAAGAGGTTGACTGAACCACTGCACACGCTGCCTAAGGATGAAGCTGTTAAAATGGTTGTAGATTTTATGAGTCTATATTCGATCAATCAAGAGGATTTTGATACTGTTATGGAGTTGTCAAAATTTCAGGGTCGTAAGAATCCATTGGATGGCGTGGCCCCTGCTGTCAAAGCTGCTCTAACAAAGGCATATAAAGAAGCAAGAAAGACACAGATGGTGCGGACTGCAGACCTCATTACACTTCCTGGAATTAAAAAGGCCCCTAAGAAGCGAATTGCAGCAATGCTAGAACCGGCTGAGGATACAGTCGAGGGCAATGGTGGAGACACATTGGCAGAAAGTGACGATGAGAACTCTTTGGACAACGAAGACGCAGAAGATTCAACAAACGCTGAGAAGAAGCTGCAACTGGAACTTCAAAACTTGAAGAAGGAAGGAATGGAAGTGCAGCTAGATTTGAAAGGTGTGGAAAATTCAAACGCCAAGAAACCTGGTGGCAGAGGAAGAGGAGGTGGTTCCCAGGCTTCAGAGAAGAAAGGTGGGGGGCGAGGTTCAGGATCTGCCACAAAGAGGAAAAGATGA

Protein sequence

MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPLHTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAEDSTNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGSATKRKR
Homology
[Close]
BLAST of Carg02665 vs. NCBI nr
Match: KAG7035906.1 (Replication factor C subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 916.0 bits (2366), Expect = 1.4e-262
Identity = 486/486 (100.00%), Postives = 486/486 (100.00%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED
Sbjct: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS
Sbjct: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 481 ATKRKR 486

[Close]
BLAST of Carg02665 vs. NCBI nr
Match: XP_022957868.1 (replication factor C subunit 1 isoform X1 [Cucurbita moschata])

HSP 1 Score: 914.8 bits (2363), Expect = 3.1e-262
Identity = 485/486 (99.79%), Postives = 486/486 (100.00%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 490 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 549

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 550 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 609

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 610 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 669

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 670 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 729

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 730 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 789

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 790 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 849

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDN+DAED
Sbjct: 850 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNDDAED 909

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS
Sbjct: 910 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 969

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 970 ATKRKR 975

[Close]
BLAST of Carg02665 vs. NCBI nr
Match: XP_023532343.1 (replication factor C subunit 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 909.4 bits (2349), Expect = 1.3e-260
Identity = 482/486 (99.18%), Postives = 484/486 (99.59%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 491 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 550

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 551 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 610

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 611 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 670

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 671 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 730

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 731 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 790

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSI+QEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 791 HTLPKDEAVKMVVDFMSLYSISQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 850

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGD LAESDDENSLDN+D ED
Sbjct: 851 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDALAESDDENSLDNDDTED 910

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS
Sbjct: 911 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 970

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 971 ATKRKR 976

[Close]
BLAST of Carg02665 vs. NCBI nr
Match: XP_022957869.1 (replication factor C subunit 1 isoform X2 [Cucurbita moschata])

HSP 1 Score: 908.7 bits (2347), Expect = 2.2e-260
Identity = 484/486 (99.59%), Postives = 485/486 (99.79%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 490 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 549

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 550 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 609

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 610 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 669

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 670 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 729

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 730 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 789

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 790 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 849

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDN+DA D
Sbjct: 850 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNDDA-D 909

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS
Sbjct: 910 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 969

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 970 ATKRKR 974

[Close]
BLAST of Carg02665 vs. NCBI nr
Match: XP_023532344.1 (replication factor C subunit 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 903.3 bits (2333), Expect = 9.2e-259
Identity = 481/486 (98.97%), Postives = 483/486 (99.38%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 491 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 550

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 551 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 610

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 611 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 670

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 671 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 730

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 731 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 790

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSI+QEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 791 HTLPKDEAVKMVVDFMSLYSISQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 850

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGD LAESDDENSLDN+D  D
Sbjct: 851 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDALAESDDENSLDNDDT-D 910

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS
Sbjct: 911 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 970

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 971 ATKRKR 975

[Close]
BLAST of Carg02665 vs. ExPASy Swiss-Prot
Match: Q9C587 (Replication factor C subunit 1 OS=Arabidopsis thaliana OX=3702 GN=RFC1 PE=2 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 5.2e-188
Identity = 355/488 (72.75%), Postives = 409/488 (83.81%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNYCL L++RKPTKQQ
Sbjct: 474 MDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQ 533

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRL  +A AEGL++NEIALEELAERVNGDIR+A+NQLQY+SLSMSVIKYDDIRQRLL 
Sbjct: 534 MAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLS 593

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           S KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DLVPLLIQENY+NYRPS   KD+
Sbjct: 594 SAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPS--GKDE 653

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
              KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS  +AS ++PASLLHG RE LEQG
Sbjct: 654 --AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVLEQG 713

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRF  WLGKNST GKN RL+EDLHVH+LASRES + RE LRV+ L L L RLT PL
Sbjct: 714 ERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLPLLLSRLTSPL 773

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
            TLPKDEAV  VVDFM+ YSI+QEDFDT++EL KF+GR+NP++GV P VKAALTK Y E 
Sbjct: 774 QTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPVKAALTKKYNEM 833

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLD-NEDAE 420
            KT+MVR AD++ LPG+KKAPKKRIAAMLEP  D++    G+ LA++++ N  D  ED+E
Sbjct: 834 NKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEEGNGSDAEEDSE 893

Query: 421 DSTNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQA---SEKKGGGR 480
           ++T+ E KL+  L+NL   G++V+LDLKG  +S ++K  G+GRG G  A   +EKK  GR
Sbjct: 894 EATDGE-KLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAADTSAEKKATGR 953

Query: 481 GSGSATKR 485
           GSG+  KR
Sbjct: 954 GSGAKRKR 956

[Close]
BLAST of Carg02665 vs. ExPASy Swiss-Prot
Match: Q2R2B4 (Replication factor C subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC1 PE=2 SV=2)

HSP 1 Score: 606.3 bits (1562), Expect = 3.1e-172
Identity = 322/488 (65.98%), Postives = 394/488 (80.74%), Query Frame = 0 

Query: 1    MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
            MDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNYCL+L+FRKPTKQQ
Sbjct: 540  MDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLLLNFRKPTKQQ 599

Query: 61   MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
            M KRL ++A  EGLQ  E A+EELAERV+GDIRMALN LQY+SLS SV+KYDDIRQRL  
Sbjct: 600  MGKRLMEIAKKEGLQAQENAMEELAERVHGDIRMALNHLQYMSLSQSVVKYDDIRQRLNS 659

Query: 121  SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
            S KDEDISPFTAVDKLFGFN G+LRMDERIDLSMSD DLVPL+IQENYINYRP +V KDD
Sbjct: 660  STKDEDISPFTAVDKLFGFNGGRLRMDERIDLSMSDPDLVPLIIQENYINYRPITVGKDD 719

Query: 181  NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
            +G+KRM+ +ARAAESIAD DI+NVQIRR+RQWQLSQ++ ++S ++PA+L+HG RE LE G
Sbjct: 720  SGVKRMNFLARAAESIADADIVNVQIRRYRQWQLSQAACLSSSIVPAALMHGNREILEAG 779

Query: 241  ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
            ERNFNRF  WLGK ST  KN+RLLED H HILAS+++   RE LR++ LTL L++LT+PL
Sbjct: 780  ERNFNRFGGWLGKYSTTNKNIRLLEDAHSHILASQQANLDRESLRLDYLTLLLRQLTDPL 839

Query: 301  HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
             T+PKDEAV+ VV+FM  YS++QEDFDT++ELSKF+G  NP+DG+ PAVK+ALTKAYK+ 
Sbjct: 840  KTMPKDEAVQKVVEFMDTYSLSQEDFDTIVELSKFKGHPNPMDGIQPAVKSALTKAYKQG 899

Query: 361  RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
              +++VR ADL+ +PG+KK  KKR+AA+LEP  +++    G   +E D+E+S D E+ ++
Sbjct: 900  SSSRVVRAADLVNIPGMKKPLKKRVAAILEPVGESLPEENGVASSEGDEEDSSDAENNDE 959

Query: 421  STNAEKKLQLELQNLKKEGMEVQLDLKGVENS-NAKK-PGGRGRGGGSQASEKKGGGRGS 480
                + K +L+LQ+ KK+G++VQLDLK   N  N+KK P GR +  GS       G    
Sbjct: 960  LVPGDTKPKLDLQSDKKKGIQVQLDLKSNGNGLNSKKMPAGRSKASGS------AGKAAG 1019

Query: 481  GSATKRKR 487
            GS  KRKR
Sbjct: 1020 GSGGKRKR 1021

[Close]
BLAST of Carg02665 vs. ExPASy Swiss-Prot
Match: P35251 (Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4)

HSP 1 Score: 218.8 bits (556), Expect = 1.4e-55
Identity = 144/420 (34.29%), Postives = 233/420 (55.48%), Query Frame = 0 

Query: 1    MDEVDGMSAG-DRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQ 60
            MDEVDGM+   DRGG+ +LI  IK +KIPIIC+CNDR   K++SLV+YC  L F++P  +
Sbjct: 719  MDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVE 778

Query: 61   QMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLL 120
            Q+   +  +A  EGL++   A+ E+    N DIR  L+ L         + YD  +    
Sbjct: 779  QIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSH 838

Query: 121  GSMKDEDISPFTAVDKLF--GFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVS 180
             + KD  + PF    K+F  G  +  + + ++ DL   D  + PL +QENYI+ +P +  
Sbjct: 839  RAKKDIKMGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPVAAG 898

Query: 181  KDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETL 240
             D    K + L++RAA+SI DGD+++ QIR  + W L  + +I + V+P  L+ G     
Sbjct: 899  GDMK--KHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPAQAIYASVLPGELMRGYM--- 958

Query: 241  EQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLT 300
                  F  F +WLGK+S+ GK+ R+++DL +H+  S  + S +  + ++ L+L    L 
Sbjct: 959  ----TQFPTFPSWLGKHSSTGKHDRIVQDLALHM--SLRTYSSKRTVNMDYLSLLRDALV 1018

Query: 301  EPLHTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAY 360
            +PL T    + V+ VV  M  Y + +EDF+ +ME+S + G+ +P   + P VKAA T+AY
Sbjct: 1019 QPL-TSQGVDGVQDVVALMDTYYLMKEDFENIMEISSWGGKPSPFSKLDPKVKAAFTRAY 1078

Query: 361  -KEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNE 417
             KEA  T         +L  I KA +   +  L+ +E   E N  D+ ++  D+++++ +
Sbjct: 1079 NKEAHLTP-------YSLQAI-KASRHSTSPSLD-SEYNEELNEDDSQSDEKDQDAIETD 1117

[Close]
BLAST of Carg02665 vs. ExPASy Swiss-Prot
Match: P35601 (Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 9.8e-54
Identity = 145/447 (32.44%), Postives = 236/447 (52.80%), Query Frame = 0 

Query: 1    MDEVDGMSAG-DRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQ 60
            MDEVDGM+   DRGG+ +LI  IK +KIPIIC+CNDR   K++SLV+YC  L F++P  +
Sbjct: 703  MDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVE 762

Query: 61   QMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLL 120
            Q+   +  +A  EGL++   A+ E+    N D+R  L+ L         + YD  +    
Sbjct: 763  QIKSAMLSIAFKEGLKIPPPAMNEIILGANQDVRQVLHNLSMWCAQSKALTYDQAKADSQ 822

Query: 121  GSMKDEDISPFTAVDKLF--GFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVS 180
             + KD  + PF    K+F  G  +  + + ++ DL   D  + PL +QENY++ +P +  
Sbjct: 823  RAKKDIRLGPFDVTRKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYLHVKPVAAG 882

Query: 181  KDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETL 240
             D    K + L++RAA+SI DGD+++ QIR  + W L  + +I + V+P  L+ G     
Sbjct: 883  GDMK--KHLMLLSRAADSICDGDLVDNQIRSKQNWSLLPTQAIYASVLPGELMRGYM--- 942

Query: 241  EQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLT 300
                  F  F +WLGK+S+ GK+ R+++DL +H+  S  + S +  + ++ L+     L 
Sbjct: 943  ----TQFPSFPSWLGKHSSTGKHDRIVQDLSLHM--SLRTYSSKRTVNMDYLSHIRDALV 1002

Query: 301  EPLHTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAY 360
             PL T    E  + V+  M  Y + +EDF+ +ME+S + G+ +    + P VKAA T+AY
Sbjct: 1003 RPL-TSQGVEGAQHVIKLMDTYYLMKEDFENIMEVSSWGGKPSAFSKLDPKVKAAFTRAY 1062

Query: 361  -KEARKT----QMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENS 420
             KEA  T    Q+V+T+ L T P +              +E + E    DT +E + +  
Sbjct: 1063 NKEAHLTPYSLQVVKTSRLSTGPAL-------------DSEYSEEFQEDDTQSEKEQDAV 1122

Query: 421  LDNEDAEDSTNAEKKLQLELQNLKKEG 440
              +   +  T + K  + E +   K+G
Sbjct: 1123 ETDAMIKKKTRSSKPSKSEREKESKKG 1124

[Close]
BLAST of Carg02665 vs. ExPASy Swiss-Prot
Match: Q54MH9 (Probable replication factor C subunit 1 OS=Dictyostelium discoideum OX=44689 GN=rfc1 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 9.5e-49
Identity = 136/452 (30.09%), Postives = 238/452 (52.65%), Query Frame = 0 

Query: 1    MDEVDGMSA-GDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQ 60
            +DE+DG S   DRGG+A++I  IK SK+P IC+CND YS K+ SL N+C+ L  RKPT  
Sbjct: 973  LDEIDGSSGNSDRGGIAEIIGLIKKSKMPFICLCNDYYSSKVTSLRNHCMDLKLRKPTLN 1032

Query: 61   QMAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLL 120
            Q++ RL  +A  EG++V+   +E++    + DIR ++N LQ +S S      D++ Q L 
Sbjct: 1033 QVSSRLLAIAKHEGMKVSSYMIEKVYTSSHSDIRQSINTLQMMSRSKRDYNNDNVTQSL- 1092

Query: 121  GSMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRP---SSV 180
               KD DISPFTA + +   ++  +  ++++D   SD  LVPL+IQENY+  RP    S 
Sbjct: 1093 -QEKDFDISPFTAAELILREDNSNI--NKKLDYFFSDFSLVPLIIQENYLKTRPYGGGSQ 1152

Query: 181  SKDDNGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRET 240
            SK ++     +L++ AA++++D D     I +   W L  +  + SC+IP+  + G    
Sbjct: 1153 SKYND----CELISMAADALSDSDQFGRAIGKEMAWNLLPTYGVTSCIIPSGYIRGSPPM 1212

Query: 241  LEQGERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRL 300
                      F ++LGK S   K  R + +L +H+ ++  +   R+  R+  + +    L
Sbjct: 1213 PLS-------FPSYLGKYSNASKQQRFVRELQLHMRSTSNTFVNRDETRLYYVPMLKHHL 1272

Query: 301  TEPLHTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKA 360
             +PL     ++ ++ V++ M  Y + ++D + ++ELS + G+++PL  V   VK+A T+ 
Sbjct: 1273 IQPL-VQDDNDGIENVINVMDEYGLTEDDRNNIIELSTW-GKEDPLKDVKTQVKSAFTRK 1332

Query: 361  YKEARKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNE 420
            ++    +  +    L++  G                     G GG  +AE  +E   +++
Sbjct: 1333 FRST--SHAIYDVSLLSSKG--------------------SGGGGTNIAEGYEEVEGESQ 1385

Query: 421  DAEDSTNAEKKLQLELQNL-KKEGMEVQLDLK 448
            +  +  + E + +  L NL KK  ++ + D K
Sbjct: 1393 NQIEEEDEETEEKDSLPNLVKKSSVKSKSDTK 1385

[Close]
BLAST of Carg02665 vs. ExPASy TrEMBL
Match: A0A6J1H1H3 (Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=3 SV=1)

HSP 1 Score: 914.8 bits (2363), Expect = 1.5e-262
Identity = 485/486 (99.79%), Postives = 486/486 (100.00%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 490 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 549

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 550 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 609

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 610 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 669

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 670 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 729

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 730 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 789

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 790 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 849

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDN+DAED
Sbjct: 850 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNDDAED 909

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS
Sbjct: 910 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 969

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 970 ATKRKR 975

[Close]
BLAST of Carg02665 vs. ExPASy TrEMBL
Match: A0A6J1H397 (Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=3 SV=1)

HSP 1 Score: 908.7 bits (2347), Expect = 1.1e-260
Identity = 484/486 (99.59%), Postives = 485/486 (99.79%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 490 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 549

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 550 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 609

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 610 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 669

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 670 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 729

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 730 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 789

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 790 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 849

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDN+DA D
Sbjct: 850 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNDDA-D 909

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS
Sbjct: 910 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 969

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 970 ATKRKR 974

[Close]
BLAST of Carg02665 vs. ExPASy TrEMBL
Match: A0A6J1JXK0 (Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 SV=1)

HSP 1 Score: 899.8 bits (2324), Expect = 4.9e-258
Identity = 477/486 (98.15%), Postives = 481/486 (98.97%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 490 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 549

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 550 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 609

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERID+SMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 610 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDISMSDMDLVPLLIQENYINYRPSSVSKDD 669

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 670 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 729

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 730 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 789

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSI+QEDFDT MELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 790 HTLPKDEAVKMVVDFMSLYSISQEDFDTFMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 849

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDT+EG GGDTLAESDDENSLDN+ AED
Sbjct: 850 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTIEGTGGDTLAESDDENSLDNDYAED 909

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNA KKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQ SEKKGGGRGSGS
Sbjct: 910 STNAGKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQTSEKKGGGRGSGS 969

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 970 ATKRKR 975

[Close]
BLAST of Carg02665 vs. ExPASy TrEMBL
Match: A0A6J1K6Q0 (Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 SV=1)

HSP 1 Score: 893.6 bits (2308), Expect = 3.5e-256
Identity = 476/486 (97.94%), Postives = 479/486 (98.56%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 490 MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 549

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG
Sbjct: 550 MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 609

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDERID+SMSDMDLVPLLIQENYINYRPSSVSKDD
Sbjct: 610 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDISMSDMDLVPLLIQENYINYRPSSVSKDD 669

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG
Sbjct: 670 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 729

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL
Sbjct: 730 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 789

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVVDFMSLYSI+QEDFDT MELSKFQGRKNPLDGVAPAVKAALTKAYKEA
Sbjct: 790 HTLPKDEAVKMVVDFMSLYSISQEDFDTFMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 849

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
           RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDT+EG GGDTLAESDDENSLDN D  D
Sbjct: 850 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTIEGTGGDTLAESDDENSLDN-DYAD 909

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQASEKKGGGRGSGS 480
           STNA KKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQ SEKKGGGRGSGS
Sbjct: 910 STNAGKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQTSEKKGGGRGSGS 969

Query: 481 ATKRKR 487
           ATKRKR
Sbjct: 970 ATKRKR 974

[Close]
BLAST of Carg02665 vs. ExPASy TrEMBL
Match: A0A6J1DHR4 (Replication factor C subunit 1 OS=Momordica charantia OX=3673 GN=LOC111020593 PE=3 SV=1)

HSP 1 Score: 828.6 bits (2139), Expect = 1.4e-236
Identity = 445/490 (90.82%), Postives = 466/490 (95.10%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIK+SKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ
Sbjct: 492 MDEVDGMSAGDRGGVADLIASIKTSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 551

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKR  QVANAEGLQVNEIALEELAERVNGD+RMALNQLQY+SLSM VIKYDDIRQRLL 
Sbjct: 552 MAKRFMQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYMSLSMPVIKYDDIRQRLLS 611

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           SMKDEDISPFTAVDKLFGFNSGKLRMDE ++LSMSD DLVPLLIQENYINYRPSSVSKDD
Sbjct: 612 SMKDEDISPFTAVDKLFGFNSGKLRMDEWVNLSMSDPDLVPLLIQENYINYRPSSVSKDD 671

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
           NGIKRMDL+ARAAESIADGDIINVQIRRHRQWQLSQSSSIASC+IPASLLHGQRETLEQG
Sbjct: 672 NGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSSIASCIIPASLLHGQRETLEQG 731

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCS R+HLRVENLTLFLKRLTEPL
Sbjct: 732 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSGRQHLRVENLTLFLKRLTEPL 791

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
           HTLPKDEAVKMVV+ MSLYSI+QEDFDTV+ELSKFQGRKNPLDGVAPAVKAALTKAYKE 
Sbjct: 792 HTLPKDEAVKMVVELMSLYSISQEDFDTVVELSKFQGRKNPLDGVAPAVKAALTKAYKEV 851

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLDNEDAED 420
            KT MVR ADLITL GIKKAPKKRIAA+LEPAEDT+EG GGDTLAESDDE++LDNE AED
Sbjct: 852 SKTHMVRAADLITLTGIKKAPKKRIAAILEPAEDTIEGAGGDTLAESDDEDALDNEGAED 911

Query: 421 STNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGG--GSQASEKKGG--GR 480
           STN E KLQLELQ+L K+GM+VQLDLKGV+NS+AKK GGRG+GG   SQASEKKGG  GR
Sbjct: 912 STNGE-KLQLELQSLNKKGMQVQLDLKGVDNSSAKKSGGRGKGGRSSSQASEKKGGGRGR 971

Query: 481 GSGSATKRKR 487
           GSGSATKRKR
Sbjct: 972 GSGSATKRKR 980

[Close]
BLAST of Carg02665 vs. TAIR 10
Match: AT5G22010.1 (replication factor C1 )

HSP 1 Score: 658.7 bits (1698), Expect = 3.7e-189
Identity = 355/488 (72.75%), Postives = 409/488 (83.81%), Query Frame = 0 

Query: 1   MDEVDGMSAGDRGGVADLIASIKSSKIPIICICNDRYSQKLKSLVNYCLILSFRKPTKQQ 60
           MDEVDGMSAGDRGGVADLIASIK SKIPIICICNDRYSQKLKSLVNYCL L++RKPTKQQ
Sbjct: 474 MDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLPLNYRKPTKQQ 533

Query: 61  MAKRLSQVANAEGLQVNEIALEELAERVNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLG 120
           MAKRL  +A AEGL++NEIALEELAERVNGDIR+A+NQLQY+SLSMSVIKYDDIRQRLL 
Sbjct: 534 MAKRLMHIAKAEGLEINEIALEELAERVNGDIRLAVNQLQYMSLSMSVIKYDDIRQRLLS 593

Query: 121 SMKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDMDLVPLLIQENYINYRPSSVSKDD 180
           S KDEDISPFTAVDKLFG+N GKLRMDERIDLSMSD DLVPLLIQENY+NYRPS   KD+
Sbjct: 594 SAKDEDISPFTAVDKLFGYNGGKLRMDERIDLSMSDPDLVPLLIQENYLNYRPS--GKDE 653

Query: 181 NGIKRMDLMARAAESIADGDIINVQIRRHRQWQLSQSSSIASCVIPASLLHGQRETLEQG 240
              KRMDL+ARAAESIADGDIINVQIRR+RQWQLSQS  +AS ++PASLLHG RE LEQG
Sbjct: 654 --AKRMDLLARAAESIADGDIINVQIRRYRQWQLSQSCCVASSILPASLLHGSREVLEQG 713

Query: 241 ERNFNRFSAWLGKNSTFGKNMRLLEDLHVHILASRESCSRREHLRVENLTLFLKRLTEPL 300
           ERNFNRF  WLGKNST GKN RL+EDLHVH+LASRES + RE LRV+ L L L RLT PL
Sbjct: 714 ERNFNRFGGWLGKNSTAGKNRRLMEDLHVHVLASRESSAGRETLRVDYLPLLLSRLTSPL 773

Query: 301 HTLPKDEAVKMVVDFMSLYSINQEDFDTVMELSKFQGRKNPLDGVAPAVKAALTKAYKEA 360
            TLPKDEAV  VVDFM+ YSI+QEDFDT++EL KF+GR+NP++GV P VKAALTK Y E 
Sbjct: 774 QTLPKDEAVSEVVDFMNSYSISQEDFDTILELGKFKGRENPMEGVPPPVKAALTKKYNEM 833

Query: 361 RKTQMVRTADLITLPGIKKAPKKRIAAMLEPAEDTVEGNGGDTLAESDDENSLD-NEDAE 420
            KT+MVR AD++ LPG+KKAPKKRIAAMLEP  D++    G+ LA++++ N  D  ED+E
Sbjct: 834 NKTRMVRVADMVQLPGVKKAPKKRIAAMLEPTVDSLRDEDGEPLADNEEGNGSDAEEDSE 893

Query: 421 DSTNAEKKLQLELQNLKKEGMEVQLDLKGVENSNAKKPGGRGRGGGSQA---SEKKGGGR 480
           ++T+ E KL+  L+NL   G++V+LDLKG  +S ++K  G+GRG G  A   +EKK  GR
Sbjct: 894 EATDGE-KLESNLKNLNARGIQVELDLKGAGSSGSRKAAGKGRGRGKAADTSAEKKATGR 953

Query: 481 GSGSATKR 485
           GSG+  KR
Sbjct: 954 GSGAKRKR 956

[Close]
BLAST of Carg02665 vs. TAIR 10
Match: AT1G04730.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 3.6e-11
Identity = 44/128 (34.38%), Postives = 64/128 (50.00%), Query Frame = 0 

Query: 28  PIICICNDRYSQKLKSLVNYCLILSFRKPTKQQMAKRLSQVANAEGLQVNEIALEELAER 87
           P+ICICND Y+  L+ L     +  F +PT  ++  RL  + N EG++    AL  LAE 
Sbjct: 456 PVICICNDLYAPALRPLRQIAKVHIFVQPTVSRVVNRLKYICNMEGMKARSFALSALAEY 515

Query: 88  VNGDIRMALNQLQYLSLSMSVIKYDDIRQRLLGSMKDEDISPFTAVDKLFGFNSGKLRMD 147
              DIR  LN LQ+L      I   DI  +++G  KD   S F    ++  F + K++ +
Sbjct: 516 TECDIRSCLNTLQFLYKKKETINVIDIGSQVVG-RKDMSKSLFDIWKEI--FTTRKMKRE 575

Query: 148 ERIDLSMS 156
              D S S
Sbjct: 576 RSNDASGS 580

The following BLAST results are available for this feature:
BLAST of Carg02665 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7035906.11.4e-262100.00Replication factor C subunit 1, partial [Cucurbita argyrosperma subsp. argyrospe... [more]
XP_022957868.13.1e-26299.79replication factor C subunit 1 isoform X1 [Cucurbita moschata][more]
XP_023532343.11.3e-26099.18replication factor C subunit 1 isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022957869.12.2e-26099.59replication factor C subunit 1 isoform X2 [Cucurbita moschata][more]
XP_023532344.19.2e-25998.97replication factor C subunit 1 isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg02665 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9C5875.2e-18872.75Replication factor C subunit 1 OS=Arabidopsis thaliana OX=3702 GN=RFC1 PE=2 SV=1[more]
Q2R2B43.1e-17265.98Replication factor C subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC1 ... [more]
P352511.4e-5534.29Replication factor C subunit 1 OS=Homo sapiens OX=9606 GN=RFC1 PE=1 SV=4[more]
P356019.8e-5432.44Replication factor C subunit 1 OS=Mus musculus OX=10090 GN=Rfc1 PE=1 SV=2[more]
Q54MH99.5e-4930.09Probable replication factor C subunit 1 OS=Dictyostelium discoideum OX=44689 GN=... [more]
BLAST of Carg02665 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1H1H31.5e-26299.79Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=... [more]
A0A6J1H3971.1e-26099.59Replication factor C subunit 1 OS=Cucurbita moschata OX=3662 GN=LOC111459280 PE=... [more]
A0A6J1JXK04.9e-25898.15Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 ... [more]
A0A6J1K6Q03.5e-25697.94Replication factor C subunit 1 OS=Cucurbita maxima OX=3661 GN=LOC111490698 PE=3 ... [more]
A0A6J1DHR41.4e-23690.82Replication factor C subunit 1 OS=Momordica charantia OX=3673 GN=LOC111020593 PE... [more]
BLAST of Carg02665 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22010.13.7e-18972.75replication factor C1 [more]
AT1G04730.13.6e-1134.38P-loop containing nucleoside triphosphate hydrolases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 418..452
NoneNo IPR availableGENE3D1.20.272.10coord: 128..238
e-value: 1.7E-29
score: 103.9
NoneNo IPR availableGENE3D1.10.8.60coord: 56..126
e-value: 4.6E-18
score: 66.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 389..428
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 443..486
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 403..418
NoneNo IPR availablePANTHERPTHR23389:SF6REPLICATION FACTOR C SUBUNIT 1coord: 1..456
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 1..456
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 56..114
e-value: 7.3873E-14
score: 64.0873
IPR013725DNA replication factor RFC1, C-terminalPFAMPF08519RFC1coord: 196..358
e-value: 3.9E-43
score: 147.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..55
e-value: 2.6E-13
score: 52.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..116
IPR010372DNA polymerase III delta, N-terminalPFAMPF06144DNA_pol3_deltacoord: 29..104
e-value: 2.1E-6
score: 27.6
IPR012178Replication factor C subunit 1PIRSFPIRSF036578RFC1coord: 1..458
e-value: 2.2E-146
score: 487.0
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 127..272

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02665-RACarg02665-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
cellular_component GO:0009360 DNA polymerase III complex
cellular_component GO:0005663 DNA replication factor C complex
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003689 DNA clamp loader activity
molecular_function GO:0003887 DNA-directed DNA polymerase activity