Carg02653 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02653
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	NDR1/HIN1-like protein 1
Location	Carg_Chr02: 7607995 .. 7608633 (+)
RNA-Seq Expression	Carg02653
Synteny	Carg02653

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGCCAAGGACAAGGACTGCGGCCACCACCACGACCACTACCAACAATTCCTCCGCCGCCTCGCCGCCGTCCTCCTCGCCTTGACCATCATCGTGGGCATTGTAATCTTCATCATATGGGCAGTTCTCCGCCCCTCCAAACCCCATTTCATCCTCCAAGACGTCACCGTTTTTAGCCTCAACGCCTCCACCTCCCCAAATCTCTTGTCTTTGAGTATGCAAGTCACAATCTCCTCGCGCAACCCCAACGACCGCATTGGCGTTTACTACCTCCAAATGGACGTTTATGGCGCTTACCGCGGCCAGCAACTCACCCTTCCCACACTCTTGCCTTCCACTTACCAAGGCCACCGTGACATCGTCGTTTGGTCCCCTTTTCTCTCCGGCGACGCCGTCCCCGTCGCGCCTGACGTCGCCGTGTCGTTACAGCAGGATAAAAACGTTGGGGCAGTTTTGTTTAATGTTAAAGTGGACGGGCAGGTTAAGTGGAAGGTGGGCACGTGGATTTCGGGCAGGTATCATTTGAATGTTAACTGCCCGGCGTTTATTAAATTTGGTAACGCTGATCATCATGCCATCGCTCTTGGCTCCGCCATGAAGTTTCAGATTGTTCAGAGCTGCCATGTTGAAGTTTGA

mRNA sequence

ATGAGCGCCAAGGACAAGGACTGCGGCCACCACCACGACCACTACCAACAATTCCTCCGCCGCCTCGCCGCCGTCCTCCTCGCCTTGACCATCATCGTGGGCATTGTAATCTTCATCATATGGGCAGTTCTCCGCCCCTCCAAACCCCATTTCATCCTCCAAGACGTCACCGTTTTTAGCCTCAACGCCTCCACCTCCCCAAATCTCTTGTCTTTGAGTATGCAAGTCACAATCTCCTCGCGCAACCCCAACGACCGCATTGGCGTTTACTACCTCCAAATGGACGTTTATGGCGCTTACCGCGGCCAGCAACTCACCCTTCCCACACTCTTGCCTTCCACTTACCAAGGCCACCGTGACATCGTCGTTTGGTCCCCTTTTCTCTCCGGCGACGCCGTCCCCGTCGCGCCTGACGTCGCCGTGTCGTTACAGCAGGATAAAAACGTTGGGGCAGTTTTGTTTAATGTTAAAGTGGACGGGCAGGTTAAGTGGAAGGTGGGCACGTGGATTTCGGGCAGGTATCATTTGAATGTTAACTGCCCGGCGTTTATTAAATTTGGTAACGCTGATCATCATGCCATCGCTCTTGGCTCCGCCATGAAGTTTCAGATTGTTCAGAGCTGCCATGTTGAAGTTTGA

Coding sequence (CDS)

ATGAGCGCCAAGGACAAGGACTGCGGCCACCACCACGACCACTACCAACAATTCCTCCGCCGCCTCGCCGCCGTCCTCCTCGCCTTGACCATCATCGTGGGCATTGTAATCTTCATCATATGGGCAGTTCTCCGCCCCTCCAAACCCCATTTCATCCTCCAAGACGTCACCGTTTTTAGCCTCAACGCCTCCACCTCCCCAAATCTCTTGTCTTTGAGTATGCAAGTCACAATCTCCTCGCGCAACCCCAACGACCGCATTGGCGTTTACTACCTCCAAATGGACGTTTATGGCGCTTACCGCGGCCAGCAACTCACCCTTCCCACACTCTTGCCTTCCACTTACCAAGGCCACCGTGACATCGTCGTTTGGTCCCCTTTTCTCTCCGGCGACGCCGTCCCCGTCGCGCCTGACGTCGCCGTGTCGTTACAGCAGGATAAAAACGTTGGGGCAGTTTTGTTTAATGTTAAAGTGGACGGGCAGGTTAAGTGGAAGGTGGGCACGTGGATTTCGGGCAGGTATCATTTGAATGTTAACTGCCCGGCGTTTATTAAATTTGGTAACGCTGATCATCATGCCATCGCTCTTGGCTCCGCCATGAAGTTTCAGATTGTTCAGAGCTGCCATGTTGAAGTTTGA

Protein sequence

MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFIKFGNADHHAIALGSAMKFQIVQSCHVEV

Homology

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BLAST of Carg02653 vs. NCBI nr
Match: KAG6605968.1 (NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035918.1 NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 429.5 bits (1103), Expect = 1.7e-116
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60
           MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS
Sbjct: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60

Query: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180
           IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV
Sbjct: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 212

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BLAST of Carg02653 vs. NCBI nr
Match: XP_022957734.1 (NDR1/HIN1-like protein 1 [Cucurbita moschata])

HSP 1 Score: 426.8 bits (1096), Expect = 1.1e-115
Identity = 209/212 (98.58%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60
           MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS
Sbjct: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60

Query: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180
           IVVWSPFLSGDAVPVAPDVAVSLQQDKN+GAVLFNVK+DGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNIGAVLFNVKMDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV
Sbjct: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 212

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BLAST of Carg02653 vs. NCBI nr
Match: XP_023534166.1 (NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 426.4 bits (1095), Expect = 1.4e-115
Identity = 210/212 (99.06%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60
           MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS
Sbjct: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60

Query: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180
           IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLF+VK+DGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFDVKMDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV
Sbjct: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 212

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BLAST of Carg02653 vs. NCBI nr
Match: XP_022995144.1 (NDR1/HIN1-like protein 1 [Cucurbita maxima])

HSP 1 Score: 425.6 bits (1093), Expect = 2.5e-115
Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60
           MSAKDKDCGHHH HYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS
Sbjct: 1   MSAKDKDCGHHHHHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60

Query: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASTSPNLLSLSMQVTISSRNPNDRIGVYYL+MDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLEMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180
           IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV
Sbjct: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 212

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BLAST of Carg02653 vs. NCBI nr
Match: XP_038901816.1 (NDR1/HIN1-like protein 1 [Benincasa hispida])

HSP 1 Score: 388.3 bits (996), Expect = 4.3e-104
Identity = 189/212 (89.15%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60
           MSAKDKDCGHH D YQQFLRRL  VLL L II+G++IFIIWAVLRPSKPHFILQDVTVF 
Sbjct: 1   MSAKDKDCGHHDDDYQQFLRRLGIVLLILIIILGLIIFIIWAVLRPSKPHFILQDVTVFG 60

Query: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNAS+SPNLLSLS+QVTISSRNPNDRIG+YYL MDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASSSPNLLSLSLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180
           +VVWSPFLSGDAVPVAPDVA+SLQQD+NVGAVLFNVK+DGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 VVVWSPFLSGDAVPVAPDVALSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           PAFIKFGN D HAIA+GSAMKFQIVQSC+VEV
Sbjct: 181 PAFIKFGNPD-HAIAIGSAMKFQIVQSCNVEV 211

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BLAST of Carg02653 vs. ExPASy Swiss-Prot
Match: Q9SRN0 (NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.4e-57
Identity = 103/208 (49.52%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 6   KDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNAS- 65
           KDC +H    ++ +RR+   ++ +  I+ + I +IWA+L+PSKP FILQD TV++ N S 
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 66  TSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVW 125
             PNLL+ + Q+T+SSRNPN++IG+YY ++DVY  YR QQ+T PT +P TYQGH+D+ +W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 126 SPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFI 185
           SPF+ G +VP+AP   VSL  DK+ G VL  ++ DG+V+WKVGT+I+G+YHL+V CPA+I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 186 KFGNADHHAIALGSAMKFQIVQSCHVEV 213
            FGN  +  I   +A+K+    SC V V
Sbjct: 182 NFGNKANGVIVGDNAVKYTFTTSCSVSV 209

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BLAST of Carg02653 vs. ExPASy Swiss-Prot
Match: Q9SJ54 (NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.2e-48
Identity = 97/208 (46.63%), Postives = 139/208 (66.83%), Query Frame = 0


Query: 6   KDCGHH-HDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNAS 65
           KDCG+H          R+  V++   IIV I IF++W +L+P+KP FILQD TV++ N S
Sbjct: 4   KDCGNHGGGGGGGTASRICGVIIGFIIIVLITIFLVWIILQPTKPRFILQDATVYAFNLS 63

Query: 66  TSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVW 125
             PNLL+ + Q+TI+SRN N RIG+YY ++ VY  YR QQ+TL T +P TYQGH++  VW
Sbjct: 64  -QPNLLTSNFQITIASRNRNSRIGIYYDRLHVYATYRNQQITLRTAIPPTYQGHKEDNVW 123

Query: 126 SPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFI 185
           SPF+ G++VP+AP  AV+L  ++N G V   ++ DG+V+WKVGT I+G+YHL+V C AFI
Sbjct: 124 SPFVYGNSVPIAPFNAVALGDEQNRGFVTLIIRADGRVRWKVGTLITGKYHLHVRCQAFI 183

Query: 186 KFGNADHHAIALGSAMKFQIVQSCHVEV 213
              +         +A+K+ ++  C V V
Sbjct: 184 NLADKAAGVHVGENAVKYMLINKCSVNV 210

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BLAST of Carg02653 vs. ExPASy Swiss-Prot
Match: Q9FI03 (NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 5.3e-36
Identity = 65/154 (42.21%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 35  IVIFIIWAVLRPSKPHFILQDVTVFSLNAST-SPNLLSLSMQVTISSRNPNDRIGVYYLQ 94
           ++IF++W +L P +P F L +  ++SLN +T S +LL+ S+Q+T+ S+NPN ++G+YY +
Sbjct: 40  LIIFLVWLILHPERPEFSLTEADIYSLNLTTSSTHLLNSSVQLTLFSKNPNKKVGIYYDK 99

Query: 95  MDVYGAYRGQQLTLPTLLPSTYQGHRDIVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVL 154
           + VY AYRGQQ+T    LP  YQ H +I + + FL G  +PVA      + ++++ G ++
Sbjct: 100 LLVYAAYRGQQITSEASLPPFYQSHEEINLLTAFLQGTELPVAQSFGYQISRERSTGKII 159

Query: 155 FNVKVDGQVKWKVGTWISGRYHLNVNCPAFIKFG 188
             +K+DG+++WK+GTW+SG Y  NVNC A + FG
Sbjct: 160 IGMKMDGKLRWKIGTWVSGAYRFNVNCLAIVAFG 193

[Close]

BLAST of Carg02653 vs. ExPASy Swiss-Prot
Match: Q9SJ52 (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 8.2e-13
Identity = 44/157 (28.03%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 25  VLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNASTSPNLLSLSMQVTISSRNPN 84
           V+++L +I+G+   I W ++RP    F + D ++   + ++  N+L  ++ +T+  RNPN
Sbjct: 44  VIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLALTVPVRNPN 103

Query: 85  DRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVWSPFLSG-DAVPVAPDVAVSL 144
            RIG+YY +++ +  Y G++ +  TL P  YQGH++  V +P   G + V      + +L
Sbjct: 104 KRIGLYYDRIEAHAYYEGKRFSTITLTP-FYQGHKNTTVLTPTFQGQNLVIFNAGQSRTL 163

Query: 145 QQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 181
             ++  G     +K   +V++K+G     R    V+C
Sbjct: 164 NAERISGVYNIEIKFRLRVRFKLGDLKFRRIKPKVDC 199

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BLAST of Carg02653 vs. ExPASy Swiss-Prot
Match: Q9SRN1 (NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.6e-11
Identity = 59/196 (30.10%), Postives = 91/196 (46.43%), Query Frame = 0


Query: 19  LRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTV--FSLNASTSPNLLSLSMQV 78
           L  +  +L+A+ +I+G+   I+W + RP+   F + D  +  FS + +   N L  S+ +
Sbjct: 52  LSLICNILIAVAVILGVAALILWLIFRPNAVKFYVADANLNRFSFDPN---NNLHYSLDL 111

Query: 79  TISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVWSPFLSGDAVPVA 138
             + RNPN R+GVYY +  V G Y G Q      + S YQGH++  V    + G  + V 
Sbjct: 112 NFTIRNPNQRVGVYYDEFSVSG-YYGDQRFGSANVSSFYQGHKNTTVILTKIEGQNLVVL 171

Query: 139 PDVA-VSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFIKFGNADHHAIA 198
            D A   L+ D+  G    N K+   V++K     S +    + C         D   I 
Sbjct: 172 GDGARTDLKDDEKSGIYRINAKLRLSVRFKFWFIKSWKLKPKIKC---------DDLKIP 231

Query: 199 LGSA-----MKFQIVQ 207
           LGS+      KFQ VQ
Sbjct: 232 LGSSNSTGGFKFQPVQ 234

[Close]

BLAST of Carg02653 vs. ExPASy TrEMBL
Match: A0A6J1H2U7 (NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459190 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.3e-116
Identity = 209/212 (98.58%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60
           MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS
Sbjct: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60

Query: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQ+TLPTLLPSTYQGHRD
Sbjct: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQVTLPTLLPSTYQGHRD 120

Query: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180
           IVVWSPFLSGDAVPVAPDVAVSLQQDKN+GAVLFNVK+DGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNIGAVLFNVKMDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV
Sbjct: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 212

[Close]

BLAST of Carg02653 vs. ExPASy TrEMBL
Match: A0A6J1K4W4 (NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111490773 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115
Identity = 210/212 (99.06%), Postives = 211/212 (99.53%), Query Frame = 0


Query: 1   MSAKDKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60
           MSAKDKDCGHHH HYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS
Sbjct: 1   MSAKDKDCGHHHHHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFS 60

Query: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRD 120
           LNASTSPNLLSLSMQVTISSRNPNDRIGVYYL+MDVYGAYRGQQLTLPTLLPSTYQGHRD
Sbjct: 61  LNASTSPNLLSLSMQVTISSRNPNDRIGVYYLEMDVYGAYRGQQLTLPTLLPSTYQGHRD 120

Query: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180
           IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC
Sbjct: 121 IVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNC 180

Query: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV
Sbjct: 181 PAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 212

[Close]

BLAST of Carg02653 vs. ExPASy TrEMBL
Match: A0A0A0KI64 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425840 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 9.8e-102
Identity = 187/213 (87.79%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MSAK-DKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVF 60
           MSAK DKDCGHH D YQQFLRRL  VLL L IIVGI+IFI+WAVLRPSKPHFILQDVTVF
Sbjct: 1   MSAKDDKDCGHHEDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVF 60

Query: 61  SLNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHR 120
            LNAS +PNLLSL +QVTISSRNPNDRIG+YYL MDVYGAYRGQQ+TLPTLLPSTYQGHR
Sbjct: 61  GLNASVTPNLLSLDLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHR 120

Query: 121 DIVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVN 180
           D+VVWSPFLSGDAVPVAPDVA+SLQQD+NVGAVLFNVK+DGQVKWKVGTWISGRYHLNVN
Sbjct: 121 DVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 180

Query: 181 CPAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           CPAFIKFGN D  AIA+GSAMKFQIVQSC+VEV
Sbjct: 181 CPAFIKFGNPD-RAIAIGSAMKFQIVQSCNVEV 212

[Close]

BLAST of Carg02653 vs. ExPASy TrEMBL
Match: A0A5A7V383 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G001050 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 4.8e-101
Identity = 187/213 (87.79%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MSAKD-KDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVF 60
           MSAKD KDCGH  D YQQFLRRL  VLL L IIVGI+IFI+WAVLRPSKPHFILQDVTVF
Sbjct: 1   MSAKDEKDCGHDDDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVF 60

Query: 61  SLNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHR 120
            LNAS SPNLLSL++QVTISSRNPNDRIG+YYL MDVYGAYRGQQ+TLPTLLPSTYQGHR
Sbjct: 61  GLNASVSPNLLSLNLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHR 120

Query: 121 DIVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVN 180
           D+VVWSPFLSGDAVPVAPDVA+SLQQD+NVGAVLFNVK+DGQVKWKVGTWISGRYHLNVN
Sbjct: 121 DVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 180

Query: 181 CPAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           CPAFIKFGN D  AIA+GSAMKFQIVQSC+VEV
Sbjct: 181 CPAFIKFGNPD-RAIAIGSAMKFQIVQSCNVEV 212

[Close]

BLAST of Carg02653 vs. ExPASy TrEMBL
Match: A0A5D3BAB6 (NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold182G00260 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.0e-100
Identity = 187/213 (87.79%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MSAKD-KDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVF 60
           MSAKD KDCG H D YQQFLRRL  VLL L IIVGI+IFI+WAVLRPSKPHFILQDVTVF
Sbjct: 1   MSAKDEKDCG-HDDDYQQFLRRLGIVLLILIIIVGIIIFIVWAVLRPSKPHFILQDVTVF 60

Query: 61  SLNASTSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHR 120
            LNAS SPNLLSL++QVTISSRNPNDRIG+YYL MDVYGAYRGQQ+TLPTLLPSTYQGHR
Sbjct: 61  GLNASVSPNLLSLNLQVTISSRNPNDRIGIYYLTMDVYGAYRGQQVTLPTLLPSTYQGHR 120

Query: 121 DIVVWSPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVN 180
           D+VVWSPFLSGDAVPVAPDVA+SLQQD+NVGAVLFNVK+DGQVKWKVGTWISGRYHLNVN
Sbjct: 121 DVVVWSPFLSGDAVPVAPDVAMSLQQDRNVGAVLFNVKIDGQVKWKVGTWISGRYHLNVN 180

Query: 181 CPAFIKFGNADHHAIALGSAMKFQIVQSCHVEV 213
           CPAFIKFGN D  AIA+GSAMKFQIVQSC+VEV
Sbjct: 181 CPAFIKFGNPD-RAIAIGSAMKFQIVQSCNVEV 211

[Close]

BLAST of Carg02653 vs. TAIR 10
Match: AT3G44220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 236.1 bits (601), Expect = 2.6e-62
Identity = 107/208 (51.44%), Postives = 150/208 (72.12%), Query Frame = 0


Query: 5   DKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNAS 64
           +K+C HHHD  ++  +R+ A++L     V  V+F++WA+L P  P F+LQD T+++ N S
Sbjct: 3   EKECEHHHDEDEKMRKRIGALVLGFLAAVLFVVFLVWAILHPHGPRFVLQDATIYAFNVS 62

Query: 65  TSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVW 124
             PN L+ ++QVT+SSRNPND+IG++Y ++D+Y +YR QQ+TL TLLP+TYQGH D+ +W
Sbjct: 63  -QPNYLTSNLQVTLSSRNPNDKIGIFYDRLDIYASYRNQQVTLATLLPATYQGHLDVTIW 122

Query: 125 SPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFI 184
           SPFL G  VPVAP  + +L QD   G VL N+K+DG V+WKVGTW+SGRY L+VNCPA+I
Sbjct: 123 SPFLYGTTVPVAPYFSPALSQDLTAGMVLLNIKIDGWVRWKVGTWVSGRYRLHVNCPAYI 182

Query: 185 KFGNADHHAIALGSAMKFQIVQSCHVEV 213
                  H    G A+K+Q+VQ C V+V
Sbjct: 183 TLAG---HFSGDGPAVKYQLVQRCAVDV 206

[Close]

BLAST of Carg02653 vs. TAIR 10
Match: AT3G11660.1 (NDR1/HIN1-like 1 )

HSP 1 Score: 224.2 bits (570), Expect = 1.0e-58
Identity = 103/208 (49.52%), Postives = 149/208 (71.63%), Query Frame = 0


Query: 6   KDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNAS- 65
           KDC +H    ++ +RR+   ++ +  I+ + I +IWA+L+PSKP FILQD TV++ N S 
Sbjct: 2   KDCENHGHSRRKLIRRIFWSIIFVLFIIFLTILLIWAILQPSKPRFILQDATVYAFNVSG 61

Query: 66  TSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVW 125
             PNLL+ + Q+T+SSRNPN++IG+YY ++DVY  YR QQ+T PT +P TYQGH+D+ +W
Sbjct: 62  NPPNLLTSNFQITLSSRNPNNKIGIYYDRLDVYATYRSQQITFPTSIPPTYQGHKDVDIW 121

Query: 126 SPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFI 185
           SPF+ G +VP+AP   VSL  DK+ G VL  ++ DG+V+WKVGT+I+G+YHL+V CPA+I
Sbjct: 122 SPFVYGTSVPIAPFNGVSLDTDKDNGVVLLIIRADGRVRWKVGTFITGKYHLHVKCPAYI 181

Query: 186 KFGNADHHAIALGSAMKFQIVQSCHVEV 213
            FGN  +  I   +A+K+    SC V V
Sbjct: 182 NFGNKANGVIVGDNAVKYTFTTSCSVSV 209

[Close]

BLAST of Carg02653 vs. TAIR 10
Match: AT5G22200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 218.0 bits (554), Expect = 7.2e-57
Identity = 104/208 (50.00%), Postives = 143/208 (68.75%), Query Frame = 0


Query: 5   DKDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNAS 64
           D+  G+     +  +RR+A   L L + V  V+F++WA+L P  P F+LQDVT+   N S
Sbjct: 7   DQHNGYEERRMRMMMRRIAWACLGLIVAVAFVVFLVWAILHPHGPRFVLQDVTINDFNVS 66

Query: 65  TSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVW 124
             PN LS ++QVT+SSRNPND+IG++Y ++D+Y  YR Q++TL  LLPSTYQGH ++ VW
Sbjct: 67  -QPNFLSSNLQVTVSSRNPNDKIGIFYDRLDIYVTYRNQEVTLARLLPSTYQGHLEVTVW 126

Query: 125 SPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFI 184
           SPFL G AVPVAP ++ +L +D   G VL N+K+DG V+WKVG+W+SG Y L+VNCPAFI
Sbjct: 127 SPFLIGSAVPVAPYLSSALNEDLFAGLVLLNIKIDGWVRWKVGSWVSGSYRLHVNCPAFI 186

Query: 185 KFGNADHHAIALGSAMKFQIVQSCHVEV 213
                       G A+K+Q+VQ C V+V
Sbjct: 187 ---TVTGKLTGTGPAIKYQLVQRCAVDV 210

[Close]

BLAST of Carg02653 vs. TAIR 10
Match: AT3G52470.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 208.8 bits (530), Expect = 4.4e-54
Identity = 98/207 (47.34%), Postives = 143/207 (69.08%), Query Frame = 0


Query: 6   KDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNAST 65
           KDCG+H    +  +R+L A ++A  +IV I IF++W +LRP+KP F+LQD TV++ N S 
Sbjct: 3   KDCGNHGGGKEVVVRKLCAAIIAFIVIVLITIFLVWVILRPTKPRFVLQDATVYAFNLS- 62

Query: 66  SPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVWS 125
            PNLL+ + QVTI+SRNPN +IG+YY ++ VY  Y  QQ+TL T +P TYQGH+++ VWS
Sbjct: 63  QPNLLTSNFQVTIASRNPNSKIGIYYDRLHVYATYMNQQITLRTAIPPTYQGHKEVNVWS 122

Query: 126 PFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFIK 185
           PF+ G AVP+AP  +V+L ++K+ G V   ++ DG V+WKV T I+G+YH++V C AFI 
Sbjct: 123 PFVYGTAVPIAPYNSVALGEEKDRGFVGLMIRADGTVRWKVRTLITGKYHIHVRCQAFIN 182

Query: 186 FGNADHHAIALGSAMKFQIVQSCHVEV 213
            GN     +   +A+K+ +   C V V
Sbjct: 183 LGNKAAGVLVGDNAVKYTLANKCSVNV 208

[Close]

BLAST of Carg02653 vs. TAIR 10
Match: AT5G06330.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 202.6 bits (514), Expect = 3.1e-52
Identity = 96/208 (46.15%), Postives = 145/208 (69.71%), Query Frame = 0


Query: 6   KDCGHHHDHYQQFLRRLAAVLLALTIIVGIVIFIIWAVLRPSKPHFILQDVTVFSLNAS- 65
           KDCG H  H     + +   +  + +++ +VI ++WA+L+PSKP F+LQD TVF+ N S 
Sbjct: 4   KDCGSHDSHSSCNRKIVIWTISIILLLILVVILLVWAILQPSKPRFVLQDATVFNFNVSG 63

Query: 66  TSPNLLSLSMQVTISSRNPNDRIGVYYLQMDVYGAYRGQQLTLPTLLPSTYQGHRDIVVW 125
             PNLL+ + Q T+SSRNPND+IG+YY ++DVY +YR QQ+TLP+ + +TYQGH+++ VW
Sbjct: 64  NPPNLLTSNFQFTLSSRNPNDKIGIYYDRLDVYASYRSQQITLPSPMLTTYQGHKEVNVW 123

Query: 126 SPFLSGDAVPVAPDVAVSLQQDKNVGAVLFNVKVDGQVKWKVGTWISGRYHLNVNCPAFI 185
           SPF+ G +VPVAP  A  L QD + GA++  + +DG+V+WKVG++I+G+YHL+V C A I
Sbjct: 124 SPFVGGYSVPVAPYNAFYLDQDHSSGAIMLMLHLDGRVRWKVGSFITGKYHLHVRCHALI 183

Query: 186 KFGNADHHAIALGSAMKFQIVQSCHVEV 213
            FG++    I      K+ + ++C V V
Sbjct: 184 NFGSSAAGVI----VGKYMLTETCSVSV 207

The following BLAST results are available for this feature:

BLAST of Carg02653 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605968.1	1.7e-116	100.00	NDR1/HIN1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
XP_022957734.1	1.1e-115	98.58	NDR1/HIN1-like protein 1 [Cucurbita moschata]	[more]
XP_023534166.1	1.4e-115	99.06	NDR1/HIN1-like protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022995144.1	2.5e-115	99.06	NDR1/HIN1-like protein 1 [Cucurbita maxima]	[more]
XP_038901816.1	4.3e-104	89.15	NDR1/HIN1-like protein 1 [Benincasa hispida]	[more]

BLAST of Carg02653 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SRN0	1.4e-57	49.52	NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=NHL1 PE=2 SV=1	[more]
Q9SJ54	1.2e-48	46.63	NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana OX=3702 GN=NHL12 PE=2 SV=1	[more]
Q9FI03	5.3e-36	42.21	NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana OX=3702 GN=NHL26 PE=2 SV=1	[more]
Q9SJ52	8.2e-13	28.03	NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1	[more]
Q9SRN1	2.6e-11	30.10	NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=NHL2 PE=2 SV=1	[more]

BLAST of Carg02653 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2U7	5.3e-116	98.58	NDR1/HIN1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111459190 PE=4 SV=1	[more]
A0A6J1K4W4	1.2e-115	99.06	NDR1/HIN1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111490773 PE=4 SV=1	[more]
A0A0A0KI64	9.8e-102	87.79	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G425840 PE=4 ...	[more]
A0A5A7V383	4.8e-101	87.79	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3BAB6	7.0e-100	87.79	NDR1/HIN1-like protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Carg02653 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44220.1	2.6e-62	51.44	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G11660.1	1.0e-58	49.52	NDR1/HIN1-like 1	[more]
AT5G22200.1	7.2e-57	50.00	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G52470.1	4.4e-54	47.34	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT5G06330.1	3.1e-52	46.15	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 77..180 e-value: 2.6E-11 score: 44.0
None	No IPR available	PANTHER	PTHR31415:SF127	PROTEIN YLS9-LIKE	coord: 10..212
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 10..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02653-RA	Carg02653-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009506	plasmodesma