Carg02582 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02582
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	transcription factor RAX2-like
Location	Carg_Chr02: 7960687 .. 7961715 (+)
RNA-Seq Expression	Carg02582
Synteny	Carg02582

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGGCGCCTTGTTGCGACAAAGCAAATGTGAAAAAGGGGCCATGGTCACCTGAAGAGGATGTTAAGCTCAAACACTTCATACAAACCTATGGGACTGGTGGCAATTGGATTTCCCTTCCTCACAAAGCTGGTATGTTTTTTAGGAGTCACGGACCTTCGTAATGGTATGATATTTGTCTATTTTGAGCATAAACTCTCGTAGCTTTGCTTTTGTACTTCCCTAAAAGGCCTCTTACCAATGAAAACGCATTCCTTACTTATAAACTTATCATCTTTCCATGTTCGGACGTTAAAATTCAAGCATTTTAATCGATATTAGCTTAACGAGTTGAGTTGAATTGAGTTGTGTTGTTTGAATCAGGTCTTAAACGGTGTGGGAAGAGTTGCAGATTGAGATGGCTGAATTACCTGAGGCCAAATATTAAGCATGGTGAATTTTCAGCTGAGGAAGATAGAATCATTTGCACTCTCTTCGCCACCATTGGAAGCCGGTAACCAAAAAGAACACAGAAATTTCTCCTCTTCCCAGAAAAACCCTTTTTCTCAAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATGAACAGATGGTCAATTATTGCTGCTCAGCTGTCGGGACGAACGGACAATGATATCAAAAACTACTGGAACACGAAGCTGAAGAAGAAACTTGTGGGGATGATATCATCTTCTCCAAACACTTATACTCAATCTTTAACCCATCAAAGCACCTCCTTGAACATTCCAAACCCAATGGCTGAACCATCACCCACTTCTAACATCATTAATGGCAGTTTGGTGGGCAACCCTTTTGAGCAGTGGCGCTATGGAGCCCTTAAAATGAATGAAATGCAAATGGGGTTTGAATTTGGAAGTGGGTTAGTCACTTCCAGTAATGGGTTTGAAGAGAATCATGGGAAGTTGATGAGCAACAACGAAAGTGAGGTGTTCTTGAAGATGGAGGAGGAGGAGGAGAAGATCAAGAGAGAAGTGGAAGAGAAGTACTTTTATTACTACTGA

mRNA sequence

ATGGGAAGGGCGCCTTGTTGCGACAAAGCAAATGTGAAAAAGGGGCCATGGTCACCTGAAGAGGATGTTAAGCTCAAACACTTCATACAAACCTATGGGACTGGTGGCAATTGGATTTCCCTTCCTCACAAAGCTGGTCTTAAACGGTGTGGGAAGAGTTGCAGATTGAGATGGCTGAATTACCTGAGGCCAAATATTAAGCATGGTGAATTTTCAGCTGAGGAAGATAGAATCATTTGCACTCTCTTCGCCACCATTGGAAGCCGATGGTCAATTATTGCTGCTCAGCTGTCGGGACGAACGGACAATGATATCAAAAACTACTGGAACACGAAGCTGAAGAAGAAACTTGTGGGGATGATATCATCTTCTCCAAACACTTATACTCAATCTTTAACCCATCAAAGCACCTCCTTGAACATTCCAAACCCAATGGCTGAACCATCACCCACTTCTAACATCATTAATGGCAGTTTGGTGGGCAACCCTTTTGAGCAGTGGCGCTATGGAGCCCTTAAAATGAATGAAATGCAAATGGGGTTTGAATTTGGAAGTGGGTTAGTCACTTCCAGTAATGGGTTTGAAGAGAATCATGGGAAGTTGATGAGCAACAACGAAAGTGAGGTGTTCTTGAAGATGGAGGAGGAGGAGGAGAAGATCAAGAGAGAAGTGGAAGAGAAGTACTTTTATTACTACTGA

Coding sequence (CDS)

ATGGGAAGGGCGCCTTGTTGCGACAAAGCAAATGTGAAAAAGGGGCCATGGTCACCTGAAGAGGATGTTAAGCTCAAACACTTCATACAAACCTATGGGACTGGTGGCAATTGGATTTCCCTTCCTCACAAAGCTGGTCTTAAACGGTGTGGGAAGAGTTGCAGATTGAGATGGCTGAATTACCTGAGGCCAAATATTAAGCATGGTGAATTTTCAGCTGAGGAAGATAGAATCATTTGCACTCTCTTCGCCACCATTGGAAGCCGATGGTCAATTATTGCTGCTCAGCTGTCGGGACGAACGGACAATGATATCAAAAACTACTGGAACACGAAGCTGAAGAAGAAACTTGTGGGGATGATATCATCTTCTCCAAACACTTATACTCAATCTTTAACCCATCAAAGCACCTCCTTGAACATTCCAAACCCAATGGCTGAACCATCACCCACTTCTAACATCATTAATGGCAGTTTGGTGGGCAACCCTTTTGAGCAGTGGCGCTATGGAGCCCTTAAAATGAATGAAATGCAAATGGGGTTTGAATTTGGAAGTGGGTTAGTCACTTCCAGTAATGGGTTTGAAGAGAATCATGGGAAGTTGATGAGCAACAACGAAAGTGAGGTGTTCTTGAAGATGGAGGAGGAGGAGGAGAAGATCAAGAGAGAAGTGGAAGAGAAGTACTTTTATTACTACTGA

Protein sequence

MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGMISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMGFEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY

Homology

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BLAST of Carg02582 vs. NCBI nr
Match: KAG7035988.1 (Transcription factor MYB36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 480.7 bits (1236), Expect = 7.0e-132
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180
           ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG
Sbjct: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180

Query: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 233
           FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY
Sbjct: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 232

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BLAST of Carg02582 vs. NCBI nr
Match: XP_022958377.1 (transcription factor RAX2-like [Cucurbita moschata])

HSP 1 Score: 479.2 bits (1232), Expect = 2.0e-131
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDTKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180
           ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG
Sbjct: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180

Query: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 233
           FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY
Sbjct: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 232

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BLAST of Carg02582 vs. NCBI nr
Match: KAG6606037.1 (Transcription factor MYB36, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 474.9 bits (1221), Expect = 3.9e-130
Identity = 229/232 (98.71%), Postives = 229/232 (98.71%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDTKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQL GRTDNDIKNYWNTKLKKKLVGM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLVGM 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180
           ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG
Sbjct: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180

Query: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 233
           FEFGSGLVTSSNGFEENHGKLMSNNESEVFLK EEEEEKIKREVEEKYFYYY
Sbjct: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKTEEEEEKIKREVEEKYFYYY 232

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BLAST of Carg02582 vs. NCBI nr
Match: XP_023534782.1 (transcription factor RAX2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455.3 bits (1170), Expect = 3.2e-124
Identity = 224/237 (94.51%), Postives = 227/237 (95.78%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED +LKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDTQLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQL GRTDNDIKNYWNTKLKKKLVGM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLVGM 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEP----SPTSNIINGSLVGNPFEQWRYGALKMNE 180
           IS SPNTYTQSLTHQSTSL+IPNPMAEP    S T NIINGSLVGNPFEQWRYGALKMNE
Sbjct: 121 ISPSPNTYTQSLTHQSTSLSIPNPMAEPSSYSSSTCNIINGSLVGNPFEQWRYGALKMNE 180

Query: 181 MQMGFEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEE-KIKREVEEKYFYYY 233
           MQMGFEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEE KIKRE+EEKYFYYY
Sbjct: 181 MQMGFEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKKIKREMEEKYFYYY 237

[Close]

BLAST of Carg02582 vs. NCBI nr
Match: XP_022995781.1 (transcription factor RAX2-like [Cucurbita maxima])

HSP 1 Score: 443.4 bits (1139), Expect = 1.2e-120
Identity = 217/236 (91.95%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED +LKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDTQLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQL GRTDNDIKNYWNTKLKKKLVGM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLVGM 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEP----SPTSNIINGSLVGNPFEQWRYGALKMNE 180
           IS SPNTYTQSLTHQSTSL+IPNPMAEP    S TSN+INGSLV NPF+QWRYGALKMN+
Sbjct: 121 ISPSPNTYTQSLTHQSTSLSIPNPMAEPSSYSSSTSNVINGSLVANPFDQWRYGALKMNQ 180

Query: 181 MQMGFEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 233
           MQMGFEFGSGLVTSSNGFEEN  KLMSNNESE+FLKM EEEEKIKRE+EEKYFYYY
Sbjct: 181 MQMGFEFGSGLVTSSNGFEENDEKLMSNNESELFLKM-EEEEKIKREMEEKYFYYY 235

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BLAST of Carg02582 vs. ExPASy Swiss-Prot
Match: Q9SJL7 (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-60
Identity = 110/165 (66.67%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVK+GPWSPEED KLK +I+  GTGGNWI+LPHKAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNI+HG+F+ EED II +LFA+IGSRWS+IAA L GRTDNDIKNYWNTKLKKKL+  
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTS--NIINGSLVGNP 164
           ++  P+ +    T  S+        A PS +S  N+IN  L  NP
Sbjct: 121 MAPPPHHHLAIATSSSS--------ASPSSSSHYNMINSLLPYNP 157

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BLAST of Carg02582 vs. ExPASy Swiss-Prot
Match: Q9FKL2 (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.3e-59
Identity = 113/159 (71.07%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEEDVKLK +I  YGTGGNWI+LP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHG FS EEDRII +L+ +IGSRWSIIAAQL GRTDNDIKNYWNTKLKKKL+G 
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLG- 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSL 160
                    Q     ST  N+ N     SP  N+ N +L
Sbjct: 121 --RQKQMNRQDSITDSTENNLSNNNNNKSP-QNLSNSAL 155

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BLAST of Carg02582 vs. ExPASy Swiss-Prot
Match: Q9M2Y9 (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 3.1e-58
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLK +I+  GTGGNWI+LP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLV 119
           YLRPNIKHG FS EE+ IIC+L+ TIGSRWSIIAAQL GRTDNDIKNYWNT+LKKKL+
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLI 118

[Close]

BLAST of Carg02582 vs. ExPASy Swiss-Prot
Match: Q9FG68 (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.2e-56
Identity = 117/203 (57.64%), Postives = 140/203 (68.97%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDK  VK+GPWSPEED KL+ +I+ YG GGNWIS P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHG+FS EEDRII +LFA IGSRWSIIAA L GRTDNDIKNYWNTKL+KKL+  
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180
            S S ++   S      S ++  P    SPT+ I + S   NP+ +        N  Q  
Sbjct: 121 SSDSSSSAMASPYLNPISQDVKRP---TSPTT-IPSSSY--NPYAE--------NPNQYP 180

Query: 181 FEFGSGLVTSSNGFEENHGKLMS 204
            +    L++S NGFE    +++S
Sbjct: 181 TK---SLISSINGFEAGDKQIIS 186

[Close]

BLAST of Carg02582 vs. ExPASy Swiss-Prot
Match: F4JSU0 (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.3e-53
Identity = 91/118 (77.12%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDK  VKKGPWS EED  LK +I+ +GTG NWISLP + G+KRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLV 119
           YLRPN+KHG F+ EED IIC+L+ TIGSRWSIIA+QL GRTDNDIKNYWNT+LKKKL+
Sbjct: 61  YLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLL 118

[Close]

BLAST of Carg02582 vs. ExPASy TrEMBL
Match: A0A6J1H1N6 (transcription factor RAX2-like OS=Cucurbita moschata OX=3662 GN=LOC111459620 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 9.9e-132
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDTKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180
           ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG
Sbjct: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180

Query: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 233
           FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY
Sbjct: 181 FEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 232

[Close]

BLAST of Carg02582 vs. ExPASy TrEMBL
Match: A0A6J1K2V7 (transcription factor RAX2-like OS=Cucurbita maxima OX=3661 GN=LOC111491212 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.0e-121
Identity = 217/236 (91.95%), Postives = 224/236 (94.92%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED +LKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDTQLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQL GRTDNDIKNYWNTKLKKKLVGM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLVGM 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEP----SPTSNIINGSLVGNPFEQWRYGALKMNE 180
           IS SPNTYTQSLTHQSTSL+IPNPMAEP    S TSN+INGSLV NPF+QWRYGALKMN+
Sbjct: 121 ISPSPNTYTQSLTHQSTSLSIPNPMAEPSSYSSSTSNVINGSLVANPFDQWRYGALKMNQ 180

Query: 181 MQMGFEFGSGLVTSSNGFEENHGKLMSNNESEVFLKMEEEEEKIKREVEEKYFYYY 233
           MQMGFEFGSGLVTSSNGFEEN  KLMSNNESE+FLKM EEEEKIKRE+EEKYFYYY
Sbjct: 181 MQMGFEFGSGLVTSSNGFEENDEKLMSNNESELFLKM-EEEEKIKREMEEKYFYYY 235

[Close]

BLAST of Carg02582 vs. ExPASy TrEMBL
Match: A0A6J1CFS2 (transcription factor RAX2-like OS=Momordica charantia OX=3673 GN=LOC111011277 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-69
Identity = 168/293 (57.34%), Postives = 190/293 (64.85%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED +LKH+I+TYGTGGNWI+LP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSQLKHYIETYGTGGNWIALPQKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQL GRTDNDIKNYWNTKLKKKL+GM
Sbjct: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGM 120

Query: 121 ISSSPNT--------YTQSL---THQST-----SLNIPNPMAEPSPT------SNIINGS 180
           ++S P +         TQSL   +HQ+      S NI NP + PSP+      SN I+GS
Sbjct: 121 MASPPPSTIPPQIIKKTQSLISPSHQNAPFHPQSNNIFNP-SSPSPSIPFNYHSNPISGS 180

Query: 181 L--------VGNPFEQWRYGALKMNEM----------------QMGFEFGSGLVTSSNGF 233
                      +P+EQ     LK N                  +MG EFGSGLV SSNGF
Sbjct: 181 CNLATYPFGFDHPYEQ----TLKSNHQFQYCTSSGGGGHGYSPKMGVEFGSGLV-SSNGF 240

[Close]

BLAST of Carg02582 vs. ExPASy TrEMBL
Match: A0A1S3CNN7 (transcription factor RAX1-like OS=Cucumis melo OX=3656 GN=LOC103502992 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 8.6e-67
Identity = 158/279 (56.63%), Postives = 174/279 (62.37%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLKH I+TYGTGGNWISLP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKHHIETYGTGGNWISLPQKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKL-VG 120
           YLRPNIKHGEFSAEED +ICTLFATIGSRWSIIAAQL GRTDNDIKNYWNTKLKKKL +G
Sbjct: 61  YLRPNIKHGEFSAEEDTVICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMMG 120

Query: 121 MISSSPNTYTQSLTHQSTSLNI-----PNPMAEPS----PTS------------------ 180
           M+SSS  T T     Q+  +       P P   PS    P S                  
Sbjct: 121 MVSSSSTTNTTHYAPQAEIVKTIETLSPKPHQNPSFDYQPLSNNSYEPLGSANYSIPLFN 180

Query: 181 ---NIINGSLVGNPFEQWR--YGALKMNEMQMGFEF------GSGLVTSSNG--FEENHG 228
              N I+  LV NPF+Q    Y  LK N  Q+GFEF      G   V+ +NG  F+E   
Sbjct: 181 YCNNPISSCLVTNPFDQNNSFYETLKPN--QVGFEFDELEYGGLNSVSFNNGLLFDEKMK 240

[Close]

BLAST of Carg02582 vs. ExPASy TrEMBL
Match: A0A5A7T0W8 (Transcription factor RAX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00030 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.2e-66
Identity = 148/246 (60.16%), Postives = 162/246 (65.85%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLKH I+TYGTGGNWISLP KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDSKLKHHIETYGTGGNWISLPQKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKL-VG 120
           YLRPNIKHGEFSAEED +ICTLFATIGSRWSIIAAQL GRTDNDIKNYWNTKLKKKL +G
Sbjct: 61  YLRPNIKHGEFSAEEDTVICTLFATIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMMG 120

Query: 121 MISSSPNTYTQSLTHQSTSLNI-----PNPMAEPS----PTS------------------ 180
           M+SSS  T T     Q+  +       P P   PS    P S                  
Sbjct: 121 MVSSSSTTNTTHYAPQAEIVKTIETLSPKPHQNPSFDYQPLSNNSYEPLGSANYSIPLFN 180

Query: 181 ---NIINGSLVGNPFEQWR--YGALKMNEMQMGFEF------GSGLVTSSNG--FEENHG 206
              N I+  LV NPF+Q    Y  LK N  Q+GFEF      G   V+ +NG  F+E   
Sbjct: 181 YCNNPISSCLVTNPFDQNNSFYETLKPN--QVGFEFDELEYGGLNSVSFNNGLLFDEKMK 240

[Close]

BLAST of Carg02582 vs. TAIR 10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 234.2 bits (596), Expect = 1.1e-61
Identity = 110/165 (66.67%), Postives = 129/165 (78.18%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVK+GPWSPEED KLK +I+  GTGGNWI+LPHKAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNI+HG+F+ EED II +LFA+IGSRWS+IAA L GRTDNDIKNYWNTKLKKKL+  
Sbjct: 61  YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTS--NIINGSLVGNP 164
           ++  P+ +    T  S+        A PS +S  N+IN  L  NP
Sbjct: 121 MAPPPHHHLAIATSSSS--------ASPSSSSHYNMINSLLPYNP 157

[Close]

BLAST of Carg02582 vs. TAIR 10
Match: AT5G57620.1 (myb domain protein 36 )

HSP 1 Score: 231.1 bits (588), Expect = 9.0e-61
Identity = 113/159 (71.07%), Postives = 122/159 (76.73%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEEDVKLK +I  YGTGGNWI+LP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHG FS EEDRII +L+ +IGSRWSIIAAQL GRTDNDIKNYWNTKLKKKL+G 
Sbjct: 61  YLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLG- 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSL 160
                    Q     ST  N+ N     SP  N+ N +L
Sbjct: 121 --RQKQMNRQDSITDSTENNLSNNNNNKSP-QNLSNSAL 155

[Close]

BLAST of Carg02582 vs. TAIR 10
Match: AT3G49690.1 (myb domain protein 84 )

HSP 1 Score: 226.5 bits (576), Expect = 2.2e-59
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLK +I+  GTGGNWI+LP K GLKRCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLV 119
           YLRPNIKHG FS EE+ IIC+L+ TIGSRWSIIAAQL GRTDNDIKNYWNT+LKKKL+
Sbjct: 61  YLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLI 118

[Close]

BLAST of Carg02582 vs. TAIR 10
Match: AT5G65790.1 (myb domain protein 68 )

HSP 1 Score: 226.1 bits (575), Expect = 2.9e-59
Identity = 99/118 (83.90%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDKANVKKGPWSPEED KLK +I+  GTGGNWI+LP K GL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLV 119
           YLRPNIKHG FS EED IIC L+ TIGSRWSIIAAQL GRTDNDIKNYWNT+LKKKL+
Sbjct: 61  YLRPNIKHGGFSEEEDNIICNLYVTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLL 118

[Close]

BLAST of Carg02582 vs. TAIR 10
Match: AT5G23000.1 (myb domain protein 37 )

HSP 1 Score: 220.3 bits (560), Expect = 1.6e-57
Identity = 117/203 (57.64%), Postives = 140/203 (68.97%), Query Frame = 0


Query: 1   MGRAPCCDKANVKKGPWSPEEDVKLKHFIQTYGTGGNWISLPHKAGLKRCGKSCRLRWLN 60
           MGRAPCCDK  VK+GPWSPEED KL+ +I+ YG GGNWIS P KAGL+RCGKSCRLRWLN
Sbjct: 1   MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61  YLRPNIKHGEFSAEEDRIICTLFATIGSRWSIIAAQLSGRTDNDIKNYWNTKLKKKLVGM 120
           YLRPNIKHG+FS EEDRII +LFA IGSRWSIIAA L GRTDNDIKNYWNTKL+KKL+  
Sbjct: 61  YLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSS 120

Query: 121 ISSSPNTYTQSLTHQSTSLNIPNPMAEPSPTSNIINGSLVGNPFEQWRYGALKMNEMQMG 180
            S S ++   S      S ++  P    SPT+ I + S   NP+ +        N  Q  
Sbjct: 121 SSDSSSSAMASPYLNPISQDVKRP---TSPTT-IPSSSY--NPYAE--------NPNQYP 180

Query: 181 FEFGSGLVTSSNGFEENHGKLMS 204
            +    L++S NGFE    +++S
Sbjct: 181 TK---SLISSINGFEAGDKQIIS 186

The following BLAST results are available for this feature:

BLAST of Carg02582 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7035988.1	7.0e-132	100.00	Transcription factor MYB36, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022958377.1	2.0e-131	99.57	transcription factor RAX2-like [Cucurbita moschata]	[more]
KAG6606037.1	3.9e-130	98.71	Transcription factor MYB36, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023534782.1	3.2e-124	94.51	transcription factor RAX2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995781.1	1.2e-120	91.95	transcription factor RAX2-like [Cucurbita maxima]	[more]

BLAST of Carg02582 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJL7	1.5e-60	66.67	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
Q9FKL2	1.3e-59	71.07	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
Q9M2Y9	3.1e-58	83.90	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
Q9FG68	2.2e-56	57.64	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]
F4JSU0	2.3e-53	77.12	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]

BLAST of Carg02582 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H1N6	9.9e-132	99.57	transcription factor RAX2-like OS=Cucurbita moschata OX=3662 GN=LOC111459620 PE=...	[more]
A0A6J1K2V7	6.0e-121	91.95	transcription factor RAX2-like OS=Cucurbita maxima OX=3661 GN=LOC111491212 PE=4 ...	[more]
A0A6J1CFS2	1.8e-69	57.34	transcription factor RAX2-like OS=Momordica charantia OX=3673 GN=LOC111011277 PE...	[more]
A0A1S3CNN7	8.6e-67	56.63	transcription factor RAX1-like OS=Cucumis melo OX=3656 GN=LOC103502992 PE=4 SV=1	[more]
A0A5A7T0W8	4.2e-66	60.16	Transcription factor RAX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of Carg02582 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G36890.1	1.1e-61	66.67	Duplicated homeodomain-like superfamily protein	[more]
AT5G57620.1	9.0e-61	71.07	myb domain protein 36	[more]
AT3G49690.1	2.2e-59	83.90	myb domain protein 84	[more]
AT5G65790.1	2.9e-59	83.90	myb domain protein 68	[more]
AT5G23000.1	1.6e-57	57.64	myb domain protein 37	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 232..232
None	No IPR available	GENE3D	1.10.10.60		coord: 7..68 e-value: 8.3E-18 score: 66.0
None	No IPR available	GENE3D	1.10.10.60		coord: 69..140 e-value: 8.4E-19 score: 69.4
None	No IPR available	PANTHER	PTHR48000	OS09G0431300 PROTEIN	coord: 1..184
None	No IPR available	PANTHER	PTHR48000:SF36	OS09G0431300 PROTEIN	coord: 1..184
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..64 e-value: 1.4E-11 score: 54.4 coord: 67..115 e-value: 1.6E-11 score: 54.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 9..62 score: 10.719653
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 63..113 score: 9.128755
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 70..113 e-value: 4.12983E-8 score: 46.4146
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 9.07615E-9 score: 47.9554
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..62 e-value: 6.9E-13 score: 48.6 coord: 69..111 e-value: 8.8E-10 score: 38.6
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..62 score: 15.084764
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 63..117 score: 20.899323
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 11..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02582-RA	Carg02582-RA	mRNA