Carg02571 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAGAATAATGAGCTGGGTCTATGCTGCTCGGTGCGCCGTGATCGGGGCCGAGCAGCCGCAGCAGCAGCAGCAACAGCAGCGAGTGATCAGCAAGCAGTTCGATCATTTTCAGATGCCTCTTCACTACCCAAAGTACAAGAGGAGTGACTATGAGGGCATGGCGGAGTGGAAACTGGACTGTCTTCTCAAGGAATACGGCCTCCCGGTGGCTGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTTCTTTGGCCTTCTGAAATGTATTGA ATGAGCAGAATAATGAGCTGGGTCTATGCTGCTCGGTGCGCCGTGATCGGGGCCGAGCAGCCGCAGCAGCAGCAGCAACAGCAGCGAGTGATCAGCAAGCAGTTCGATCATTTTCAGATGCCTCTTCACTACCCAAAGTACAAGAGGAGTGACTATGAGGGCATGGCGGAGTGGAAACTGGACTGTCTTCTCAAGGAATACGGCCTCCCGGTGGCTGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTTCTTTGGCCTTCTGAAATGTATTGA ATGAGCAGAATAATGAGCTGGGTCTATGCTGCTCGGTGCGCCGTGATCGGGGCCGAGCAGCCGCAGCAGCAGCAGCAACAGCAGCGAGTGATCAGCAAGCAGTTCGATCATTTTCAGATGCCTCTTCACTACCCAAAGTACAAGAGGAGTGACTATGAGGGCATGGCGGAGTGGAAACTGGACTGTCTTCTCAAGGAATACGGCCTCCCGGTGGCTGGAGACGTCGCCCAGAAGCGAAAGTTCGCCATGGGAGCTTTTCTTTGGCCTTCTGAAATGTATTGA MSRIMSWVYAARCAVIGAEQPQQQQQQQRVISKQFDHFQMPLHYPKYKRSDYEGMAEWKLDCLLKEYGLPVAGDVAQKRKFAMGAFLWPSEMY Homology
BLAST of Carg02571 vs. NCBI nr
Match: KAG7035999.1 (hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 196.8 bits (499), Expect = 8.1e-47 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of Carg02571 vs. NCBI nr
Match: KAG6606051.1 (hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44 Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg02571 vs. NCBI nr
Match: XP_022958391.1 (uncharacterized protein LOC111459627 [Cucurbita moschata]) HSP 1 Score: 186.4 bits (472), Expect = 1.1e-43 Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg02571 vs. NCBI nr
Match: KAE8647840.1 (hypothetical protein Csa_000107 [Cucumis sativus]) HSP 1 Score: 131.7 bits (330), Expect = 3.2e-27 Identity = 63/88 (71.59%), Postives = 70/88 (79.55%), Query Frame = 0
BLAST of Carg02571 vs. NCBI nr
Match: KAA0042696.1 (hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa] >TYK06100.1 hypothetical protein E5676_scaffold376G002010 [Cucumis melo var. makuwa]) HSP 1 Score: 131.7 bits (330), Expect = 3.2e-27 Identity = 63/89 (70.79%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of Carg02571 vs. ExPASy TrEMBL
Match: A0A6J1H1Y5 (uncharacterized protein LOC111459627 OS=Cucurbita moschata OX=3662 GN=LOC111459627 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 5.3e-44 Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0
BLAST of Carg02571 vs. ExPASy TrEMBL
Match: A0A0A0KMG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G151500 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 4.4e-30 Identity = 68/93 (73.12%), Postives = 74/93 (79.57%), Query Frame = 0
BLAST of Carg02571 vs. ExPASy TrEMBL
Match: A0A5D3C447 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002010 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 1.6e-27 Identity = 63/89 (70.79%), Postives = 69/89 (77.53%), Query Frame = 0
BLAST of Carg02571 vs. ExPASy TrEMBL
Match: A0A6J1CXF4 (uncharacterized protein LOC111015321 OS=Momordica charantia OX=3673 GN=LOC111015321 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 2.5e-25 Identity = 57/70 (81.43%), Postives = 62/70 (88.57%), Query Frame = 0
BLAST of Carg02571 vs. ExPASy TrEMBL
Match: A0A6I9T0H3 (uncharacterized protein LOC105158521 OS=Sesamum indicum OX=4182 GN=LOC105158521 PE=4 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 7.5e-22 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 0
BLAST of Carg02571 vs. TAIR 10
Match: AT5G41761.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 91.3 bits (225), Expect = 4.5e-19 Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 0
BLAST of Carg02571 vs. TAIR 10
Match: AT3G55570.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.0 bits (193), Expect = 2.3e-15 Identity = 33/53 (62.26%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of Carg02571 vs. TAIR 10
Match: AT5G55620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09950.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 2.8e-13 Identity = 30/55 (54.55%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Carg02571 vs. TAIR 10
Match: AT3G09950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41761.1); Has 128 Blast hits to 128 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 128; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 4.1e-12 Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
BLAST of Carg02571 vs. TAIR 10
Match: AT3G11405.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55570.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 3.8e-10 Identity = 29/52 (55.77%), Postives = 39/52 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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