Carg02562 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02562
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Reticulon-like protein
Location	Carg_Chr02: 8080915 .. 8083153 (-)
RNA-Seq Expression	Carg02562
Synteny	Carg02562

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATCACACCCTGCTCTGGGCTTGTGGATTTAGCGGAACACGGACAAAAAAGGGGTTTTCAGTTTTCATTTTGATCCGTTTTTTCTCACTTCCTGAACGGTTGCAAGTGATTTTTGGGATCTGTTGTAGCTTGTTCTTGGTGATTCTGGCAGCCATGACGGAGCATCACGAGCACCAGCATGAGGAGCCCAAAGCCGAGTCGTTGATTGACAAGATTGCCGAGAAGATTCACGCTCATGATTCCTCTTCTTCCGATTCCGAGGATGATAAGGGGAGTGCTTCTGCTACTATCAAATCTAAGATTTATCGCCTCTTCGGCAGGGAAAGGCCCGTCCACAAGGTTTTTGGTGGTGGGAAACGTAAGTAATTCTCATTATTTTGTTTTCAGAGTTTGCTCTCATCTCCTTCTTATGGTGGAAATTATGTGACTAGTTTTTGTATTTCGATTTCAGTGTCTCGGTTTGATTTGTTTACTTCTAAGTGGATTTACTGTTTGAAGAAATTTCTGGATGTTGAATTTGGATTATCTTTGAATTTCTTCTTTTTCTATTGAAATTATTTGCTTCCGTTGTGGATCGGATATCTCACAGAGGAACTTTCAGTTGAGCTTCATAGATCTAGATCTATTTACAGTTCTGGCTTAGGCTTTTAAGTCAATCCTGTTTCATTCTCCAATACTTGGTCAACAATGCTCCATTTCTTGGATTTTTCAATTTCGGGATGCGAGATTGCAAGATATTATCTTTTGCTTGATTTCTTTAGCATGGTGTCATTGTTCTTTTACAAAATTGAACTACGAACTTCAAACCATTCGAGAATTGTCGAGTAATAATCCTCTTCCTGTTCCATGGTAGCACGAAAATCACTCTGGGTTAAGAAAATTTTGATGTTATACAAAGTCATTTTTTCGTTGATGTATCTCATTATCATTGTTTTCCCTCCTTTATCCCAATCTCTTCTCTACAGCGGCTGATATCTTCCTGTGGAGAAACAAAAAGGTCTCCGGTGGAGTTCTAGGAGGAGCCACAGTTGCATGGATTTTGTTTGAGCTGCTTGAGTATCACTTTCTGACATTGATTTGCCACATTTTGATGGCTGCTCTTGCAGTAGTGTTTTTGTGGTCTAATGCTTCTTTCTTCATTAACAAGTATGTTTTTCTAGCTTGCCATTCAATTCATCATTTGAATGTTTGCTTAGCCGCTGTCTATGGCTGACACCTTTTCCGCACAGGTCTCTGCCACACATCCCTCAAGTTCACATTCCAGAGGGGCCAGTTAAAGAGATTGCCTCTGCTTTGAGAGTTGAGATCAATAGGGCCATCGCTGTGTTGAGAGAAATTGCATCAGGAAGAGATCTGAAGAGCTTTCTTTCTGTATGTTAACTTCTACCTCTTGGAATCTTGTTCATAAAGGCAGTTACTAAATTTAAGAAACCATCTCATGAAAATTAAGCTTATGTTATACGGTTTTATCTTAAGAACTCATACTCTCATAATTTTGTCTGCTAGGCAATTGCTGGTTTGTGGGTTCTGTCCATTGTAGGAAGTTGGTTCAACTTCCTTACCCTGCTATATATTGGTGAGGAAGTTGTTACTTAATTAGTTGTGAATACCCATTAGTCTTGTCCATTTTAGTGACGTTTGTTGTGCAATCAAATATGTAACAGGAGTTATTTTGCTCTTCACTGTGCCTGTGTTCTACGAGAAATACGATGACAAGGTCGATGCGTATGCAGAGAAGGCAATGGCAGAGCTGAAGAAGCAGTATGCAGTGTTTGATGCGAAAGTGTTGTCTAAAATCCCAAGAGGACCACTGAAGGACAAGAAGATTGCTTGAGGGAGGCGATGTCGGGAGTGTTGTGGTGGTAGCAGGTCCTGTTTTTTATCAAACTCTATGAACTTGGTAGGCTTTTTGTCGTTGGCGTTCTGAAGTTTCATCCATGAAAGAATCTGTTTTTTAGTTGTGTTCTCATCGGTGGGGTTGGCAATGTGGACTAATTTGTGGATTGCTGATAATACACATGATTTTGGTACACTATTTAATGGCCCTGTTTTATATGTTAAGCCTTAGTGAAGCACAATTTGATAGGTTTGATTGATGATATAAAGTGAGTGTTTCATTCTGGTTGGGCTATTAGTGATGTGATGTGCAGGGATAAGAATGTTGTGAGATCTTCTCATGGATCCTTCATTCTACAAGCATTTCATAATTTTGTTGTTGTTGTTGTTGTTTTTTTTTT

mRNA sequence

GGAATCACACCCTGCTCTGGGCTTGTGGATTTAGCGGAACACGGACAAAAAAGGGGTTTTCAGTTTTCATTTTGATCCGTTTTTTCTCACTTCCTGAACGGTTGCAAGTGATTTTTGGGATCTGTTGTAGCTTGTTCTTGGTGATTCTGGCAGCCATGACGGAGCATCACGAGCACCAGCATGAGGAGCCCAAAGCCGAGTCGTTGATTGACAAGATTGCCGAGAAGATTCACGCTCATGATTCCTCTTCTTCCGATTCCGAGGATGATAAGGGGAGTGCTTCTGCTACTATCAAATCTAAGATTTATCGCCTCTTCGGCAGGGAAAGGCCCGTCCACAAGGTTTTTGGTGGTGGGAAACCGGCTGATATCTTCCTGTGGAGAAACAAAAAGGTCTCCGGTGGAGTTCTAGGAGGAGCCACAGTTGCATGGATTTTGTTTGAGCTGCTTGAGTATCACTTTCTGACATTGATTTGCCACATTTTGATGGCTGCTCTTGCAGTAGTGTTTTTGTGGTCTAATGCTTCTTTCTTCATTAACAAGTCTCTGCCACACATCCCTCAAGTTCACATTCCAGAGGGGCCAGTTAAAGAGATTGCCTCTGCTTTGAGAGTTGAGATCAATAGGGCCATCGCTGTGTTGAGAGAAATTGCATCAGGAAGAGATCTGAAGAGCTTTCTTTCTGCAATTGCTGGTTTGTGGGTTCTGTCCATTGTAGGAAGTTGGTTCAACTTCCTTACCCTGCTATATATTGGAGTTATTTTGCTCTTCACTGTGCCTGTGTTCTACGAGAAATACGATGACAAGGTCGATGCGTATGCAGAGAAGGCAATGGCAGAGCTGAAGAAGCAGTATGCAGTGTTTGATGCGAAAGTGTTGTCTAAAATCCCAAGAGGACCACTGAAGGACAAGAAGATTGCTTGAGGGAGGCGATGTCGGGAGTGTTGTGGTGGTAGCAGGTCCTGTTTTTTATCAAACTCTATGAACTTGGTAGGCTTTTTGTCGTTGGCGTTCTGAAGTTTCATCCATGAAAGAATCTGTTTTTTAGTTGTGTTCTCATCGGTGGGGTTGGCAATGTGGACTAATTTGTGGATTGCTGATAATACACATGATTTTGGTACACTATTTAATGGCCCTGTTTTATATGTTAAGCCTTAGTGAAGCACAATTTGATAGGTTTGATTGATGATATAAAGTGAGTGTTTCATTCTGGTTGGGCTATTAGTGATGTGATGTGCAGGGATAAGAATGTTGTGAGATCTTCTCATGGATCCTTCATTCTACAAGCATTTCATAATTTTGTTGTTGTTGTTGTTGTTTTTTTTTT

Coding sequence (CDS)

ATGACGGAGCATCACGAGCACCAGCATGAGGAGCCCAAAGCCGAGTCGTTGATTGACAAGATTGCCGAGAAGATTCACGCTCATGATTCCTCTTCTTCCGATTCCGAGGATGATAAGGGGAGTGCTTCTGCTACTATCAAATCTAAGATTTATCGCCTCTTCGGCAGGGAAAGGCCCGTCCACAAGGTTTTTGGTGGTGGGAAACCGGCTGATATCTTCCTGTGGAGAAACAAAAAGGTCTCCGGTGGAGTTCTAGGAGGAGCCACAGTTGCATGGATTTTGTTTGAGCTGCTTGAGTATCACTTTCTGACATTGATTTGCCACATTTTGATGGCTGCTCTTGCAGTAGTGTTTTTGTGGTCTAATGCTTCTTTCTTCATTAACAAGTCTCTGCCACACATCCCTCAAGTTCACATTCCAGAGGGGCCAGTTAAAGAGATTGCCTCTGCTTTGAGAGTTGAGATCAATAGGGCCATCGCTGTGTTGAGAGAAATTGCATCAGGAAGAGATCTGAAGAGCTTTCTTTCTGCAATTGCTGGTTTGTGGGTTCTGTCCATTGTAGGAAGTTGGTTCAACTTCCTTACCCTGCTATATATTGGAGTTATTTTGCTCTTCACTGTGCCTGTGTTCTACGAGAAATACGATGACAAGGTCGATGCGTATGCAGAGAAGGCAATGGCAGAGCTGAAGAAGCAGTATGCAGTGTTTGATGCGAAAGTGTTGTCTAAAATCCCAAGAGGACCACTGAAGGACAAGAAGATTGCTTGA

Protein sequence

MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKVLSKIPRGPLKDKKIA

Homology

[Close]

BLAST of Carg02562 vs. NCBI nr
Match: KAG6606060.1 (Reticulon-like protein B2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036008.1 Reticulon-like protein B2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 491.5 bits (1264), Expect = 4.4e-135
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60
           MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV
Sbjct: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60

Query: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120
           HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW
Sbjct: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120

Query: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180
           SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG
Sbjct: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180

Query: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240
           LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV
Sbjct: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240

Query: 241 LSKIPRGPLKDKKIA 256
           LSKIPRGPLKDKKIA
Sbjct: 241 LSKIPRGPLKDKKIA 255

[Close]

BLAST of Carg02562 vs. NCBI nr
Match: XP_022958440.1 (reticulon-like protein B2 [Cucurbita moschata])

HSP 1 Score: 490.3 bits (1261), Expect = 9.8e-135
Identity = 254/255 (99.61%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60
           MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV
Sbjct: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60

Query: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120
           HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW
Sbjct: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120

Query: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180
           SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG
Sbjct: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180

Query: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240
           LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVD+YAEKAMAELKKQYAVFDAKV
Sbjct: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDSYAEKAMAELKKQYAVFDAKV 240

Query: 241 LSKIPRGPLKDKKIA 256
           LSKIPRGPLKDKKIA
Sbjct: 241 LSKIPRGPLKDKKIA 255

[Close]

BLAST of Carg02562 vs. NCBI nr
Match: XP_023534109.1 (reticulon-like protein B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.0 bits (1260), Expect = 1.3e-134
Identity = 253/255 (99.22%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60
           MTEHHEH+HEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV
Sbjct: 1   MTEHHEHEHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60

Query: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120
           HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW
Sbjct: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120

Query: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180
           SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG
Sbjct: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180

Query: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240
           LWVLSIVGSWFNFLTLLYIG+ILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV
Sbjct: 181 LWVLSIVGSWFNFLTLLYIGIILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240

Query: 241 LSKIPRGPLKDKKIA 256
           LSKIPRGPLKDKKIA
Sbjct: 241 LSKIPRGPLKDKKIA 255

[Close]

BLAST of Carg02562 vs. NCBI nr
Match: XP_022996318.1 (reticulon-like protein B2 [Cucurbita maxima])

HSP 1 Score: 488.8 bits (1257), Expect = 2.8e-134
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60
           MTEHHEH+HEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV
Sbjct: 1   MTEHHEHEHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60

Query: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120
           HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW
Sbjct: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120

Query: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180
           SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINR IAVLREIASGRDLKSFLSAIAG
Sbjct: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRGIAVLREIASGRDLKSFLSAIAG 180

Query: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240
           LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV
Sbjct: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240

Query: 241 LSKIPRGPLKDKKIA 256
           LSKIPRGPLKDKKIA
Sbjct: 241 LSKIPRGPLKDKKIA 255

[Close]

BLAST of Carg02562 vs. NCBI nr
Match: XP_038876010.1 (reticulon-like protein B2 [Benincasa hispida])

HSP 1 Score: 459.1 bits (1180), Expect = 2.4e-125
Identity = 237/257 (92.22%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MTEH--HEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRER 60
           M EH  HEHQHEEPK ESL+DKI EKIHAHDSSSSDS+DDKG  SA+ KSKIYRLFGRER
Sbjct: 1   MAEHHDHEHQHEEPKGESLLDKITEKIHAHDSSSSDSDDDKGDTSASFKSKIYRLFGRER 60

Query: 61  PVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVF 120
           PVHKVFGGGKPADIFLWR+KKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVF
Sbjct: 61  PVHKVFGGGKPADIFLWRDKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVF 120

Query: 121 LWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAI 180
           LWSNASFFINKSLPHIPQVHIPE PVKEIASALRVEINRAIAVLR+IASGRDLKSFL AI
Sbjct: 121 LWSNASFFINKSLPHIPQVHIPEEPVKEIASALRVEINRAIAVLRDIASGRDLKSFLYAI 180

Query: 181 AGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDA 240
           AGLWVLS+VGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVD +AEKAMAE+KKQY VFDA
Sbjct: 181 AGLWVLSVVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDTFAEKAMAEIKKQYVVFDA 240

Query: 241 KVLSKIPRGPLKDKKIA 256
           KVLSKIPRGPLKDKKIA
Sbjct: 241 KVLSKIPRGPLKDKKIA 257

[Close]

BLAST of Carg02562 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-95
Identity = 178/269 (66.17%), Postives = 223/269 (82.90%), Query Frame = 0


Query: 1   MTEHHEHQHEEP---------KAESLIDKIAEKIH----AHDSSSSDSEDDKGSASA--- 60
           M + H+H+   P         + ESL++K++EKIH    +  SSSSD E++K S+S+   
Sbjct: 1   MADEHKHEESSPNLDPAVEVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPK 60

Query: 61  TIKSKIYRLFGRERPVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLT 120
           ++KSK+YRLFGRERPVHKV GGGKPADIF+W++KK+SGGV GGATVAW+LFEL+EYH LT
Sbjct: 61  SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120

Query: 121 LICHILMAALAVVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLRE 180
           L+CH+++ ALAV+FLWSNA+ FI+KS P IP+VHIPE P+ ++AS LR+EINR I+ LRE
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180

Query: 181 IASGRDLKSFLSAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEK 240
           IASGRD+K FLSAIAGLWVLSI+G  ++FLTL YI ++LLFTVP+FY+KY+DKVD+Y EK
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240

Query: 241 AMAELKKQYAVFDAKVLSKIPRGPLKDKK 254
           AMAELKKQYAV DAKV SKIPRGPLKDKK
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of Carg02562 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 4.0e-91
Identity = 177/273 (64.84%), Postives = 213/273 (78.02%), Query Frame = 0


Query: 1   MTEHHEHQH---------EEPKAESLIDKIAEKIH-----AHDSSSSDSEDDK------G 60
           M E H+H           E  + ESL+DKI+EKIH     +  SSSSD ED+K       
Sbjct: 1   MAEEHKHDESVIAPEPAVEVVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPS 60

Query: 61  SASATIKSKIYRLFGRERPVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEY 120
           S S+++KSK+YRLFGRE+PVHKV GGGKPADIF+W+NKK+SGGVLGGAT AW++FEL+EY
Sbjct: 61  SPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEY 120

Query: 121 HFLTLICHILMAALAVVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIA 180
           H LTL+CH+++  LAV+FLWSNA+ FINKS P IP+VHIPE P+ ++AS LR+EINR  +
Sbjct: 121 HLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFS 180

Query: 181 VLREIASGRDLKSFLSAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDA 240
            LREIASGRDLK FL AIAGLWVLSI+G  FNFLTL YI ++LLFTVP+ Y+KY+DKVD 
Sbjct: 181 SLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDP 240

Query: 241 YAEKAMAELKKQYAVFDAKVLSKIPRGPLKDKK 254
             EKAM ELKKQYAV D KVLSKIP GPLK+KK
Sbjct: 241 LGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of Carg02562 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 2.4e-88
Identity = 171/262 (65.27%), Postives = 203/262 (77.48%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAH-DSSS-SDSEDDK---GSASATIKSKIYRLFG 60
           M E H+H+      ES+++KI EKIH H DSSS SDS+DDK    S+S++ KSKIYRLFG
Sbjct: 1   MVEDHKHE------ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFG 60

Query: 61  RERPVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALA 120
           RE+PVHKV GGGKPADIFLWRNKKVSGGVLG  T +W+LFEL EYH L  +CH  + ALA
Sbjct: 61  REKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALA 120

Query: 121 VVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFL 180
            +FLWSNA  FI+KS PHIP+VHIPE P+ ++ S LR+EINR + +LR IASG+D+K F+
Sbjct: 121 ALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFI 180

Query: 181 SAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAV 240
             IAGLWVLSI+GS +NFLTL Y   +LLFT+PV YEKY+DKVDAY EKAM E+KKQYAV
Sbjct: 181 LVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAV 240

Query: 241 FDAKVL----SKIPRGPLKDKK 254
            D KVL    SKIPRG L  KK
Sbjct: 241 LDEKVLRKVISKIPRGALNKKK 256

[Close]

BLAST of Carg02562 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 1.8e-86
Identity = 174/249 (69.88%), Postives = 203/249 (81.53%), Query Frame = 0


Query: 6   EHQHEEPKAESLIDKIAEKIHAHD---SSSSDSEDDKGSASATIKSKIYRLFGRERPVHK 65
           EH+HE    ES+++KI+EKIH HD   SSSSDS+DDK SAS  +K+KIYRLFGRE+P+HK
Sbjct: 4   EHKHE----ESIMEKISEKIHGHDDSSSSSSDSDDDKNSAS--LKTKIYRLFGREQPLHK 63

Query: 66  VFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLWSN 125
           +FGGGKPADIFLWRNKKVSGGVLG ATV+WILFELLEY+ LTL  HI + ALAV+FLWS+
Sbjct: 64  LFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSS 123

Query: 126 ASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAGLW 185
           AS FI+KS  HIP+VHIPE  V ++AS LR+EINR   VLR+IASGRDLK FL  IAGLW
Sbjct: 124 ASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLW 183

Query: 186 VLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKVL- 245
           VLS VGS  NFLTL+YI  +LLFT+PV YEKY+DKVD + EKAM E+KKQY  FD KVL 
Sbjct: 184 VLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLS 243

Query: 246 ---SKIPRG 248
              SKIP+G
Sbjct: 244 KVMSKIPKG 246

[Close]

BLAST of Carg02562 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 3.2e-80
Identity = 151/248 (60.89%), Postives = 193/248 (77.82%), Query Frame = 0


Query: 6   EHQHEEPKAESLIDKIAEKIHAHD-SSSSDSEDDKGSASATIKSKIYRLFGRERPVHKVF 65
           E +   P  ESL++KI+EKIH HD SSSS+SE +K  + + +K+KIYR+FGRE+PVHKV 
Sbjct: 4   EIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVL 63

Query: 66  GGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLWSNAS 125
           GGGKPAD+FLWR+KK+SG VLG AT  W+LFEL+EYH L+L+CHI + AL  +FLWSNA 
Sbjct: 64  GGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAH 123

Query: 126 FFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAGLWVL 185
             INK+ P IP++H+PE     +AS+LR E+N+A  +LR IA GRDLK FL  + GLW++
Sbjct: 124 TLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWII 183

Query: 186 SIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKVLSKI 245
           S+VG+WFNFLTL+YI  ++L TVP+ YEK++DKVD  AEKAM EL+KQY VFD KVLSKI
Sbjct: 184 SVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243

Query: 246 PRGPLKDK 253
           P   LK K
Sbjct: 244 PIASLKAK 251

[Close]

BLAST of Carg02562 vs. ExPASy TrEMBL
Match: A0A6J1H3G1 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111459662 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 4.7e-135
Identity = 254/255 (99.61%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60
           MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV
Sbjct: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60

Query: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120
           HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW
Sbjct: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120

Query: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180
           SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG
Sbjct: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180

Query: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240
           LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVD+YAEKAMAELKKQYAVFDAKV
Sbjct: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDSYAEKAMAELKKQYAVFDAKV 240

Query: 241 LSKIPRGPLKDKKIA 256
           LSKIPRGPLKDKKIA
Sbjct: 241 LSKIPRGPLKDKKIA 255

[Close]

BLAST of Carg02562 vs. ExPASy TrEMBL
Match: A0A6J1KAG4 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111491582 PE=4 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.4e-134
Identity = 253/255 (99.22%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60
           MTEHHEH+HEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV
Sbjct: 1   MTEHHEHEHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRERPV 60

Query: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120
           HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW
Sbjct: 61  HKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLW 120

Query: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAG 180
           SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINR IAVLREIASGRDLKSFLSAIAG
Sbjct: 121 SNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRGIAVLREIASGRDLKSFLSAIAG 180

Query: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240
           LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV
Sbjct: 181 LWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKV 240

Query: 241 LSKIPRGPLKDKKIA 256
           LSKIPRGPLKDKKIA
Sbjct: 241 LSKIPRGPLKDKKIA 255

[Close]

BLAST of Carg02562 vs. ExPASy TrEMBL
Match: A0A0A0KK51 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G151610 PE=4 SV=1)

HSP 1 Score: 459.1 bits (1180), Expect = 1.2e-125
Identity = 236/257 (91.83%), Postives = 247/257 (96.11%), Query Frame = 0


Query: 1   MTEH--HEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRER 60
           M EH  HEH+HEEPK ESL+DKI EKIHAHDSSSSDS+DDKG ASA+IKSKIYRLFGRER
Sbjct: 1   MAEHHDHEHEHEEPKGESLLDKITEKIHAHDSSSSDSDDDKGDASASIKSKIYRLFGRER 60

Query: 61  PVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVF 120
           PVHKVFGGGKPADIFLWR+KK+SGGVLGGAT+AWILFELLEYHFLTLICHI MAALAVVF
Sbjct: 61  PVHKVFGGGKPADIFLWRDKKLSGGVLGGATIAWILFELLEYHFLTLICHIFMAALAVVF 120

Query: 121 LWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAI 180
           LWSNASFFINKSLPHIPQVHIPEGPV EIASALRVEINRAIAVLREIASGRDLKSFL AI
Sbjct: 121 LWSNASFFINKSLPHIPQVHIPEGPVVEIASALRVEINRAIAVLREIASGRDLKSFLYAI 180

Query: 181 AGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDA 240
           AGLWVLSIVGSWFNFLTLLYIGVI+LFTVP+FYEKYDDKVDA+AEKAMAE+KKQY VFDA
Sbjct: 181 AGLWVLSIVGSWFNFLTLLYIGVIVLFTVPLFYEKYDDKVDAFAEKAMAEIKKQYVVFDA 240

Query: 241 KVLSKIPRGPLKDKKIA 256
           KVLSKIPRGPLKDKKIA
Sbjct: 241 KVLSKIPRGPLKDKKIA 257

[Close]

BLAST of Carg02562 vs. ExPASy TrEMBL
Match: A0A5A7TL63 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G002110 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.4e-124
Identity = 233/257 (90.66%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MTEH--HEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRER 60
           M EH  HEH+HEEPK ESL+DKI EKIHAHDSSSSDS+DDKG  SA+IKSKIYRLFGRER
Sbjct: 1   MAEHHDHEHEHEEPKGESLLDKITEKIHAHDSSSSDSDDDKGDTSASIKSKIYRLFGRER 60

Query: 61  PVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVF 120
           PVHKVFGGGKPADIFLWR+KK+SGGVLGGAT+AWILFELLEYHFLTLICHI MAALAVVF
Sbjct: 61  PVHKVFGGGKPADIFLWRDKKLSGGVLGGATIAWILFELLEYHFLTLICHIFMAALAVVF 120

Query: 121 LWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAI 180
           LWSNASFFINKSLPHIPQVHIPE PV EIASALRVEINRAIAVLR+IASGRDLKSFL AI
Sbjct: 121 LWSNASFFINKSLPHIPQVHIPEDPVIEIASALRVEINRAIAVLRDIASGRDLKSFLYAI 180

Query: 181 AGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDA 240
           AGLWVLSI+GSWFNFLTLLYIGVI+LFTVPVFYEKYDDKVDA+AEKAMAE+KKQY VFDA
Sbjct: 181 AGLWVLSILGSWFNFLTLLYIGVIVLFTVPVFYEKYDDKVDAFAEKAMAEIKKQYVVFDA 240

Query: 241 KVLSKIPRGPLKDKKIA 256
           KVLSKIPRGPLKDKKIA
Sbjct: 241 KVLSKIPRGPLKDKKIA 257

[Close]

BLAST of Carg02562 vs. ExPASy TrEMBL
Match: A0A1S3AUD6 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103482797 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 6.4e-124
Identity = 233/257 (90.66%), Postives = 245/257 (95.33%), Query Frame = 0


Query: 1   MTEH--HEHQHEEPKAESLIDKIAEKIHAHDSSSSDSEDDKGSASATIKSKIYRLFGRER 60
           M EH  HEH+HEEPK ESL+DKI EKIHAHDSSSSDS+DDKG  SA+IKSKIYRLFGRER
Sbjct: 1   MAEHHDHEHEHEEPKGESLLDKITEKIHAHDSSSSDSDDDKGDTSASIKSKIYRLFGRER 60

Query: 61  PVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVF 120
           PVHKVFGGGKPADIFLWR+KK+SGGVLGGAT+AWILFELLEYHFLTLICHI MAALAVVF
Sbjct: 61  PVHKVFGGGKPADIFLWRDKKLSGGVLGGATIAWILFELLEYHFLTLICHIFMAALAVVF 120

Query: 121 LWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAI 180
           LWSNASFFINKSLPHIPQVHIPE PV EIASALRVEINRAIAVLR+IASGRDLKSFL AI
Sbjct: 121 LWSNASFFINKSLPHIPQVHIPEDPVIEIASALRVEINRAIAVLRDIASGRDLKSFLYAI 180

Query: 181 AGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDA 240
           AGLWVLSI+GSWFNFLTLLYIGVI+LFTVPVFYEKYDDKVDA+AEKAMAE+KKQY VFDA
Sbjct: 181 AGLWVLSILGSWFNFLTLLYIGVIVLFTVPVFYEKYDDKVDAFAEKAMAEIKKQYVVFDA 240

Query: 241 KVLSKIPRGPLKDKKIA 256
           KVLSKIPRGPLKDKKIA
Sbjct: 241 KVLSKIPRGPLKDKKIA 257

[Close]

BLAST of Carg02562 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 )

HSP 1 Score: 349.0 bits (894), Expect = 3.3e-96
Identity = 178/269 (66.17%), Postives = 223/269 (82.90%), Query Frame = 0


Query: 1   MTEHHEHQHEEP---------KAESLIDKIAEKIH----AHDSSSSDSEDDKGSASA--- 60
           M + H+H+   P         + ESL++K++EKIH    +  SSSSD E++K S+S+   
Sbjct: 1   MADEHKHEESSPNLDPAVEVVERESLMEKLSEKIHHKGDSSSSSSSDDENEKKSSSSSPK 60

Query: 61  TIKSKIYRLFGRERPVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLT 120
           ++KSK+YRLFGRERPVHKV GGGKPADIF+W++KK+SGGV GGATVAW+LFEL+EYH LT
Sbjct: 61  SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLT 120

Query: 121 LICHILMAALAVVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLRE 180
           L+CH+++ ALAV+FLWSNA+ FI+KS P IP+VHIPE P+ ++AS LR+EINR I+ LRE
Sbjct: 121 LLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLRE 180

Query: 181 IASGRDLKSFLSAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEK 240
           IASGRD+K FLSAIAGLWVLSI+G  ++FLTL YI ++LLFTVP+FY+KY+DKVD+Y EK
Sbjct: 181 IASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEK 240

Query: 241 AMAELKKQYAVFDAKVLSKIPRGPLKDKK 254
           AMAELKKQYAV DAKV SKIPRGPLKDKK
Sbjct: 241 AMAELKKQYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of Carg02562 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 )

HSP 1 Score: 335.9 bits (860), Expect = 2.9e-92
Identity = 177/273 (64.84%), Postives = 213/273 (78.02%), Query Frame = 0


Query: 1   MTEHHEHQH---------EEPKAESLIDKIAEKIH-----AHDSSSSDSEDDK------G 60
           M E H+H           E  + ESL+DKI+EKIH     +  SSSSD ED+K       
Sbjct: 1   MAEEHKHDESVIAPEPAVEVVERESLMDKISEKIHHGGDSSSSSSSSDDEDEKKKTKKPS 60

Query: 61  SASATIKSKIYRLFGRERPVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEY 120
           S S+++KSK+YRLFGRE+PVHKV GGGKPADIF+W+NKK+SGGVLGGAT AW++FEL+EY
Sbjct: 61  SPSSSMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEY 120

Query: 121 HFLTLICHILMAALAVVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIA 180
           H LTL+CH+++  LAV+FLWSNA+ FINKS P IP+VHIPE P+ ++AS LR+EINR  +
Sbjct: 121 HLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFS 180

Query: 181 VLREIASGRDLKSFLSAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDA 240
            LREIASGRDLK FL AIAGLWVLSI+G  FNFLTL YI ++LLFTVP+ Y+KY+DKVD 
Sbjct: 181 SLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDP 240

Query: 241 YAEKAMAELKKQYAVFDAKVLSKIPRGPLKDKK 254
             EKAM ELKKQYAV D KVLSKIP GPLK+KK
Sbjct: 241 LGEKAMIELKKQYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of Carg02562 vs. TAIR 10
Match: AT5G41600.1 (VIRB2-interacting protein 3 )

HSP 1 Score: 326.6 bits (836), Expect = 1.7e-89
Identity = 171/262 (65.27%), Postives = 203/262 (77.48%), Query Frame = 0


Query: 1   MTEHHEHQHEEPKAESLIDKIAEKIHAH-DSSS-SDSEDDK---GSASATIKSKIYRLFG 60
           M E H+H+      ES+++KI EKIH H DSSS SDS+DDK    S+S++ KSKIYRLFG
Sbjct: 1   MVEDHKHE------ESILEKIVEKIHGHGDSSSLSDSDDDKKSTSSSSSSFKSKIYRLFG 60

Query: 61  RERPVHKVFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALA 120
           RE+PVHKV GGGKPADIFLWRNKKVSGGVLG  T +W+LFEL EYH L  +CH  + ALA
Sbjct: 61  REKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALA 120

Query: 121 VVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFL 180
            +FLWSNA  FI+KS PHIP+VHIPE P+ ++ S LR+EINR + +LR IASG+D+K F+
Sbjct: 121 ALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFI 180

Query: 181 SAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAV 240
             IAGLWVLSI+GS +NFLTL Y   +LLFT+PV YEKY+DKVDAY EKAM E+KKQYAV
Sbjct: 181 LVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAV 240

Query: 241 FDAKVL----SKIPRGPLKDKK 254
            D KVL    SKIPRG L  KK
Sbjct: 241 LDEKVLRKVISKIPRGALNKKK 256

[Close]

BLAST of Carg02562 vs. TAIR 10
Match: AT1G64090.1 (Reticulan like protein B3 )

HSP 1 Score: 320.5 bits (820), Expect = 1.2e-87
Identity = 174/249 (69.88%), Postives = 203/249 (81.53%), Query Frame = 0


Query: 6   EHQHEEPKAESLIDKIAEKIHAHD---SSSSDSEDDKGSASATIKSKIYRLFGRERPVHK 65
           EH+HE    ES+++KI+EKIH HD   SSSSDS+DDK SAS  +K+KIYRLFGRE+P+HK
Sbjct: 4   EHKHE----ESIMEKISEKIHGHDDSSSSSSDSDDDKNSAS--LKTKIYRLFGREQPLHK 63

Query: 66  VFGGGKPADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLICHILMAALAVVFLWSN 125
           +FGGGKPADIFLWRNKKVSGGVLG ATV+WILFELLEY+ LTL  HI + ALAV+FLWS+
Sbjct: 64  LFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSS 123

Query: 126 ASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIASGRDLKSFLSAIAGLW 185
           AS FI+KS  HIP+VHIPE  V ++AS LR+EINR   VLR+IASGRDLK FL  IAGLW
Sbjct: 124 ASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLW 183

Query: 186 VLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAMAELKKQYAVFDAKVL- 245
           VLS VGS  NFLTL+YI  +LLFT+PV YEKY+DKVD + EKAM E+KKQY  FD KVL 
Sbjct: 184 VLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLS 243

Query: 246 ---SKIPRG 248
              SKIP+G
Sbjct: 244 KVMSKIPKG 246

[Close]

BLAST of Carg02562 vs. TAIR 10
Match: AT1G64090.2 (Reticulan like protein B3 )

HSP 1 Score: 307.0 bits (785), Expect = 1.4e-83
Identity = 173/265 (65.28%), Postives = 202/265 (76.23%), Query Frame = 0


Query: 6   EHQHEEPKAESLIDKIAEKIHAHD---SSSSDSEDDKGSASATIKSKIYRLFGRERPVHK 65
           EH+HE    ES+++KI+EKIH HD   SSSSDS+DDK SAS  +K+KIYRLFGRE+P+HK
Sbjct: 4   EHKHE----ESIMEKISEKIHGHDDSSSSSSDSDDDKNSAS--LKTKIYRLFGREQPLHK 63

Query: 66  VFGGGK----------------PADIFLWRNKKVSGGVLGGATVAWILFELLEYHFLTLI 125
           +FGGGK                 ADIFLWRNKKVSGGVLG ATV+WILFELLEY+ LTL 
Sbjct: 64  LFGGGKHSENQDINERFGLVFAAADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLF 123

Query: 126 CHILMAALAVVFLWSNASFFINKSLPHIPQVHIPEGPVKEIASALRVEINRAIAVLREIA 185
            HI + ALAV+FLWS+AS FI+KS  HIP+VHIPE  V ++AS LR+EINR   VLR+IA
Sbjct: 124 GHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIA 183

Query: 186 SGRDLKSFLSAIAGLWVLSIVGSWFNFLTLLYIGVILLFTVPVFYEKYDDKVDAYAEKAM 245
           SGRDLK FL  IAGLWVLS VGS  NFLTL+YI  +LLFT+PV YEKY+DKVD + EKAM
Sbjct: 184 SGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAM 243

Query: 246 AELKKQYAVFDAKVL----SKIPRG 248
            E+KKQY  FD KVL    SKIP+G
Sbjct: 244 REIKKQYVEFDVKVLSKVMSKIPKG 262

The following BLAST results are available for this feature:

BLAST of Carg02562 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606060.1	4.4e-135	100.00	Reticulon-like protein B2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7...	[more]
XP_022958440.1	9.8e-135	99.61	reticulon-like protein B2 [Cucurbita moschata]	[more]
XP_023534109.1	1.3e-134	99.22	reticulon-like protein B2 [Cucurbita pepo subsp. pepo]	[more]
XP_022996318.1	2.8e-134	99.22	reticulon-like protein B2 [Cucurbita maxima]	[more]
XP_038876010.1	2.4e-125	92.22	reticulon-like protein B2 [Benincasa hispida]	[more]

BLAST of Carg02562 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUT9	4.6e-95	66.17	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q9SUR3	4.0e-91	64.84	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
Q9FFS0	2.4e-88	65.27	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]
Q9SH59	1.8e-86	69.88	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]
O82352	3.2e-80	60.89	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]

BLAST of Carg02562 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3G1	4.7e-135	99.61	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111459662 PE=4 SV=1	[more]
A0A6J1KAG4	1.4e-134	99.22	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111491582 PE=4 SV=1	[more]
A0A0A0KK51	1.2e-125	91.83	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G151610 PE=4 SV=1	[more]
A0A5A7TL63	6.4e-124	90.66	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3...	[more]
A0A1S3AUD6	6.4e-124	90.66	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103482797 PE=4 SV=1	[more]

BLAST of Carg02562 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11220.1	3.3e-96	66.17	VIRB2-interacting protein 2	[more]
AT4G23630.1	2.9e-92	64.84	VIRB2-interacting protein 1	[more]
AT5G41600.1	1.7e-89	65.27	VIRB2-interacting protein 3	[more]
AT1G64090.1	1.2e-87	69.88	Reticulan like protein B3	[more]
AT1G64090.2	1.4e-83	65.28	Reticulan like protein B3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 70..225 e-value: 6.3E-59 score: 198.4
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 69..255 score: 46.063183
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 6..254
None	No IPR available	PANTHER	PTHR10994:SF156	RETICULON-LIKE PROTEIN	coord: 6..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02562-RA	Carg02562-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane