Carg02561 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02561
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Late embryogenesis abundant protein-like protein
Location	Carg_Chr02: 8092654 .. 8093082 (-)
RNA-Seq Expression	Carg02561
Synteny	Carg02561

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAATTCCAATTATTTATGTTTCTCAGATGGTGGCGTAATCATTGTGGCTAGTGTCTTTGTGCGGAATCCTAATGTTGCGTCGTTCAAATACTCAAAAGCCACGACGGTGATTTACTACCATAACGAGATGATCGGAGAGGGGGAGACGTCGGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAAGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTGAATATCAGTAGCTACACGGAAATCCCAGGAAGGGTTAAAATAATTGGATTCATCAAGAAAAAGTTTGAGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAACATGTAAAAATGTCCGATTAA

mRNA sequence

ATGGAAAATTCCAATTATTTATGTTTCTCAGATGGTGGCGTAATCATTGTGGCTAGTGTCTTTGTGCGGAATCCTAATGTTGCGTCGTTCAAATACTCAAAAGCCACGACGGTGATTTACTACCATAACGAGATGATCGGAGAGGGGGAGACGTCGGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAAGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTGAATATCAGTAGCTACACGGAAATCCCAGGAAGGGTTAAAATAATTGGATTCATCAAGAAAAAGTTTGAGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAACATGTAAAAATGTCCGATTAA

Coding sequence (CDS)

ATGGAAAATTCCAATTATTTATGTTTCTCAGATGGTGGCGTAATCATTGTGGCTAGTGTCTTTGTGCGGAATCCTAATGTTGCGTCGTTCAAATACTCAAAAGCCACGACGGTGATTTACTACCATAACGAGATGATCGGAGAGGGGGAGACGTCGGGGGGAGAGGCGAAGGCAAAGGACACGATGACGATGAATGTGACGGTGGAGATCAAAGCGGAGGAAATGGATGAGGGTTTGAGTTTGATGGAGGATTTGAAGTCGGGAGGTTTGAATATCAGTAGCTACACGGAAATCCCAGGAAGGGTTAAAATAATTGGATTCATCAAGAAAAAGTTTGAGGTTAAAATGGAGTGCTCATTCACTTACAATGCTAAAACCCAAACGATTGAAAAGGAAGATTGTGATCAACATGTAAAAATGTCCGATTAA

Protein sequence

MENSNYLCFSDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVEIKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTIEKEDCDQHVKMSD

Homology

[Close]

BLAST of Carg02561 vs. NCBI nr
Match: KAG7036009.1 (Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.3 bits (726), Expect = 5.9e-73
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MENSNYLCFSDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKD 60
           MENSNYLCFSDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKD
Sbjct: 1   MENSNYLCFSDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKD 60

Query: 61  TMTMNVTVEIKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSF 120
           TMTMNVTVEIKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSF
Sbjct: 61  TMTMNVTVEIKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSF 120

Query: 121 TYNAKTQTIEKEDCDQHVKMSD 143
           TYNAKTQTIEKEDCDQHVKMSD
Sbjct: 121 TYNAKTQTIEKEDCDQHVKMSD 142

[Close]

BLAST of Carg02561 vs. NCBI nr
Match: XP_023532981.1 (uncharacterized protein LOC111794996 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 251.1 bits (640), Expect = 5.6e-63
Identity = 126/133 (94.74%), Postives = 129/133 (96.99%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+GG+IIVASVFVRNPN ASFKYSKATTVIYYH E+IGEGET GGEAKAKDTMTMNVTVE
Sbjct: 283 SNGGIIIVASVFVRNPNFASFKYSKATTVIYYHGEVIGEGETPGGEAKAKDTMTMNVTVE 342

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKF VKMECSFTYNAKTQTI
Sbjct: 343 IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFAVKMECSFTYNAKTQTI 402

Query: 130 EKEDCDQHVKMSD 143
           EKEDCDQHVKMSD
Sbjct: 403 EKEDCDQHVKMSD 415

[Close]

BLAST of Carg02561 vs. NCBI nr
Match: XP_022958536.1 (uncharacterized protein LOC111459739 [Cucurbita moschata])

HSP 1 Score: 247.7 bits (631), Expect = 6.1e-62
Identity = 123/133 (92.48%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+GGVIIV SVFVRNPNVASFKY KATTVIYYH++MIGEGET GGEAKAKDTMTMNVT+E
Sbjct: 296 SNGGVIIVVSVFVRNPNVASFKYLKATTVIYYHDKMIGEGETPGGEAKAKDTMTMNVTME 355

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFI+K+FEVKMECSFTYNAKTQTI
Sbjct: 356 IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIRKRFEVKMECSFTYNAKTQTI 415

Query: 130 EKEDCDQHVKMSD 143
           E+EDCDQHVKMSD
Sbjct: 416 EREDCDQHVKMSD 428

[Close]

BLAST of Carg02561 vs. NCBI nr
Match: XP_022995815.1 (uncharacterized protein LOC111491239 [Cucurbita maxima])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+GG+IIVASVFVRNPNVASFKYSKAT +IYYH  MIGEGET GGEAKAKDTMTMNVTVE
Sbjct: 83  SNGGIIIVASVFVRNPNVASFKYSKATMMIYYHGAMIGEGETPGGEAKAKDTMTMNVTVE 142

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           IKAEEMDEGLSLMEDLKSGGLNISSY EIPGRVKIIGFIKK FEVK+ECSFTYNAKTQTI
Sbjct: 143 IKAEEMDEGLSLMEDLKSGGLNISSYMEIPGRVKIIGFIKKMFEVKLECSFTYNAKTQTI 202

Query: 130 EKEDCDQHVKMSD 143
           EKEDCD+ VK+SD
Sbjct: 203 EKEDCDERVKISD 215

[Close]

BLAST of Carg02561 vs. NCBI nr
Match: XP_008437350.1 (PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo] >KAA0042714.1 late embryogenesis abundant protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 6.0e-41
Identity = 85/132 (64.39%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+ G+I+VASV VRNPNVASFKYSKA+T IYYHN++IGEGET  GE KAKDT+ MNVTV+
Sbjct: 85  SNSGIIVVASVSVRNPNVASFKYSKASTKIYYHNKVIGEGETPPGEVKAKDTLKMNVTVK 144

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           I+  ++D+  SL++D  SG L+ISSYTEIPGRVK++G IKK + VK+ CS TYN+K++TI
Sbjct: 145 IEPWKIDDASSLIKDWNSGALSISSYTEIPGRVKLLGAIKKNYLVKISCSLTYNSKSKTI 204

Query: 130 EKEDCDQHVKMS 142
           +++DCDQ V++S
Sbjct: 205 QRQDCDQRVRIS 216

[Close]

BLAST of Carg02561 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06
Identity = 35/123 (28.46%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 16  IVASVFVRNPNVASFKYSKAT-TVIYYHNEMIGEGETSGGEAKAKDTMTM-NVTVEIKAE 75
           +V+ + +RN N  +F++  +T  V+Y  + ++GE +  G   +A  T+ +  V VEI + 
Sbjct: 94  LVSDISIRNSNFGAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSF 153

Query: 76  EMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVK-MECSFTYNAKTQTIEKE 135
            + +   L +DL+ G L + S  E+ GR+K++G  +K+++V  M C+   N   + I+  
Sbjct: 154 RLLDTKDLDKDLRLGFLELRSVAEVRGRIKVLG--RKRWKVSVMSCTMRLNLTGRFIQNL 213

[Close]

BLAST of Carg02561 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.0e-62
Identity = 123/133 (92.48%), Postives = 130/133 (97.74%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+GGVIIV SVFVRNPNVASFKY KATTVIYYH++MIGEGET GGEAKAKDTMTMNVT+E
Sbjct: 296 SNGGVIIVVSVFVRNPNVASFKYLKATTVIYYHDKMIGEGETPGGEAKAKDTMTMNVTME 355

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFI+K+FEVKMECSFTYNAKTQTI
Sbjct: 356 IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIRKRFEVKMECSFTYNAKTQTI 415

Query: 130 EKEDCDQHVKMSD 143
           E+EDCDQHVKMSD
Sbjct: 416 EREDCDQHVKMSD 428

[Close]

BLAST of Carg02561 vs. ExPASy TrEMBL
Match: A0A6J1K4Z4 (uncharacterized protein LOC111491239 OS=Cucurbita maxima OX=3661 GN=LOC111491239 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.1e-60
Identity = 120/133 (90.23%), Postives = 126/133 (94.74%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+GG+IIVASVFVRNPNVASFKYSKAT +IYYH  MIGEGET GGEAKAKDTMTMNVTVE
Sbjct: 83  SNGGIIIVASVFVRNPNVASFKYSKATMMIYYHGAMIGEGETPGGEAKAKDTMTMNVTVE 142

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           IKAEEMDEGLSLMEDLKSGGLNISSY EIPGRVKIIGFIKK FEVK+ECSFTYNAKTQTI
Sbjct: 143 IKAEEMDEGLSLMEDLKSGGLNISSYMEIPGRVKIIGFIKKMFEVKLECSFTYNAKTQTI 202

Query: 130 EKEDCDQHVKMSD 143
           EKEDCD+ VK+SD
Sbjct: 203 EKEDCDERVKISD 215

[Close]

BLAST of Carg02561 vs. ExPASy TrEMBL
Match: A0A5A7THA2 (Late embryogenesis abundant protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002120 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.9e-41
Identity = 85/132 (64.39%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+ G+I+VASV VRNPNVASFKYSKA+T IYYHN++IGEGET  GE KAKDT+ MNVTV+
Sbjct: 85  SNSGIIVVASVSVRNPNVASFKYSKASTKIYYHNKVIGEGETPPGEVKAKDTLKMNVTVK 144

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           I+  ++D+  SL++D  SG L+ISSYTEIPGRVK++G IKK + VK+ CS TYN+K++TI
Sbjct: 145 IEPWKIDDASSLIKDWNSGALSISSYTEIPGRVKLLGAIKKNYLVKISCSLTYNSKSKTI 204

Query: 130 EKEDCDQHVKMS 142
           +++DCDQ V++S
Sbjct: 205 QRQDCDQRVRIS 216

[Close]

BLAST of Carg02561 vs. ExPASy TrEMBL
Match: A0A1S3ATT7 (uncharacterized protein LOC103482794 OS=Cucumis melo OX=3656 GN=LOC103482794 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.9e-41
Identity = 85/132 (64.39%), Postives = 112/132 (84.85%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+ G+I+VASV VRNPNVASFKYSKA+T IYYHN++IGEGET  GE KAKDT+ MNVTV+
Sbjct: 85  SNSGIIVVASVSVRNPNVASFKYSKASTKIYYHNKVIGEGETPPGEVKAKDTLKMNVTVK 144

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           I+  ++D+  SL++D  SG L+ISSYTEIPGRVK++G IKK + VK+ CS TYN+K++TI
Sbjct: 145 IEPWKIDDASSLIKDWNSGALSISSYTEIPGRVKLLGAIKKNYLVKISCSLTYNSKSKTI 204

Query: 130 EKEDCDQHVKMS 142
           +++DCDQ V++S
Sbjct: 205 QRQDCDQRVRIS 216

[Close]

BLAST of Carg02561 vs. ExPASy TrEMBL
Match: A0A0A0KMH1 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152140 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 86/132 (65.15%), Postives = 110/132 (83.33%), Query Frame = 0


Query: 10  SDGGVIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVE 69
           S+ G+I+VASV VRNPNVASFKYSKA+  IYYH+++IGEGET  GE KAKDT+ MNVTVE
Sbjct: 86  SNSGIIVVASVSVRNPNVASFKYSKASIEIYYHDKVIGEGETPPGEVKAKDTLRMNVTVE 145

Query: 70  IKAEEMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTI 129
           I+  +MD+  SL++D  SG L+ISSYTEIPGRVKI+G IKK + VK+ CS TYN+K++TI
Sbjct: 146 IEPWKMDDASSLIKDWNSGSLSISSYTEIPGRVKILGSIKKNYLVKISCSLTYNSKSKTI 205

Query: 130 EKEDCDQHVKMS 142
           + +DCDQ V++S
Sbjct: 206 QGQDCDQRVRIS 217

[Close]

BLAST of Carg02561 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 97.8 bits (242), Expect = 7.3e-21
Identity = 53/129 (41.09%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 14  VIIVASVFVRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVEIKAE 73
           + ++  V V+NPN ASFKYS  TT IYY   ++GE     G+A+   T  MNVTV+I  +
Sbjct: 94  ISMIVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHRTSRMNVTVDIMLD 153

Query: 74  EM--DEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTIEK 133
            +  D GL   E  +SG +N+ SYT + G+VKI+G +KK   VKM C+   N   Q I+ 
Sbjct: 154 RILSDPGLG-REISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQD 213

Query: 134 EDCDQHVKM 141
            DC + + +
Sbjct: 214 VDCKKKIDL 221

[Close]

BLAST of Carg02561 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 62.0 bits (149), Expect = 4.5e-10
Identity = 24/119 (20.17%), Postives = 60/119 (50.42%), Query Frame = 0


Query: 22  VRNPNVASFKYSKATTVIYYHNEMIGEGETSGGEAKAKDTMTMNVTVEIKAEEMDEGLSL 81
           ++NPN   F Y  ++ ++ Y  ++IGE         A+ T+ +N+T+ + A+ +     L
Sbjct: 117 LKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSETQL 176

Query: 82  MEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMECSFTYNAKTQTIEKEDCDQHVKM 141
           + D+ +G + ++++ ++ G+V ++   K K +    C  + +   + +  + C    K+
Sbjct: 177 LSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKYSTKL 235

[Close]

BLAST of Carg02561 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 54.3 bits (129), Expect = 9.3e-08
Identity = 35/123 (28.46%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 16  IVASVFVRNPNVASFKYSKAT-TVIYYHNEMIGEGETSGGEAKAKDTMTM-NVTVEIKAE 75
           +V+ + +RN N  +F++  +T  V+Y  + ++GE +  G   +A  T+ +  V VEI + 
Sbjct: 94  LVSDISIRNSNFGAFEFEDSTLRVVYADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSF 153

Query: 76  EMDEGLSLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVK-MECSFTYNAKTQTIEKE 135
            + +   L +DL+ G L + S  E+ GR+K++G  +K+++V  M C+   N   + I+  
Sbjct: 154 RLLDTKDLDKDLRLGFLELRSVAEVRGRIKVLG--RKRWKVSVMSCTMRLNLTGRFIQNL 213

[Close]

BLAST of Carg02561 vs. TAIR 10
Match: AT4G23610.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07
Identity = 35/106 (33.02%), Postives = 54/106 (50.94%), Query Frame = 0


Query: 16  IVASVFVRNPNVASFKYSKATTVIYYHNEM--IGEGETSGGEAKAKDTMTMNVTVEIKAE 75
           +   + + NPN A F   K   V +YH E+  +GE         AK T+ MN+T EI   
Sbjct: 107 VSVEISLHNPNPALF-IVKNVNVSFYHGELVVVGESIRRSETIPAKRTVKMNLTAEIVKT 166

Query: 76  EMDEGL-SLMEDLKSGGLNISSYTEIPGRVKIIGFIKKKFEVKMEC 119
           ++   L  LMEDL   G+++ S  E+ GRVK +   +K   ++ +C
Sbjct: 167 KLLASLPGLMEDLNGRGVDLKSSVEVRGRVKKMKIFRKTVHLQTDC 211

The following BLAST results are available for this feature:

BLAST of Carg02561 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036009.1	5.9e-73	100.00	Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. argy...	[more]
XP_023532981.1	5.6e-63	94.74	uncharacterized protein LOC111794996 [Cucurbita pepo subsp. pepo]	[more]
XP_022958536.1	6.1e-62	92.48	uncharacterized protein LOC111459739 [Cucurbita moschata]	[more]
XP_022995815.1	1.7e-59	90.23	uncharacterized protein LOC111491239 [Cucurbita maxima]	[more]
XP_008437350.1	6.0e-41	64.39	PREDICTED: uncharacterized protein LOC103482794 [Cucumis melo] >KAA0042714.1 lat...	[more]

BLAST of Carg02561 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	1.3e-06	28.46	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Carg02561 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2C0	3.0e-62	92.48	uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597...	[more]
A0A6J1K4Z4	8.1e-60	90.23	uncharacterized protein LOC111491239 OS=Cucurbita maxima OX=3661 GN=LOC111491239...	[more]
A0A5A7THA2	2.9e-41	64.39	Late embryogenesis abundant protein-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3ATT7	2.9e-41	64.39	uncharacterized protein LOC103482794 OS=Cucumis melo OX=3656 GN=LOC103482794 PE=...	[more]
A0A0A0KMH1	1.1e-40	65.15	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152140 PE=4 ...	[more]

BLAST of Carg02561 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46150.1	7.3e-21	41.09	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G54200.1	4.5e-10	20.17	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT1G64065.1	9.3e-08	28.46	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT4G23610.1	1.6e-07	33.02	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 22..119 e-value: 3.7E-12 score: 46.7
None	No IPR available	GENE3D	2.60.40.1820		coord: 5..123 e-value: 3.9E-9 score: 38.5
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 14..139
None	No IPR available	PANTHER	PTHR31852:SF151	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 14..139
None	No IPR available	SUPERFAMILY	117070	LEA14-like	coord: 7..74

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02561-RA	Carg02561-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane