|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAATGTACCTGATATTAGGTTGGAAGAAGATAATATATGCTACATATTGTAATTCCTCGTATCTATACGTTTTTTCCTCGAGCTTGACGTTGATTTCATCGGTACAACTCGTCTCTGTATCTGATTGTTCCAAGTTCATTTACCCTTTATCGAGCCCATGGAGCGTCATTGTTCATAAGAAATCTGTGAGTTTTAGAATAGTATCCAGAGATTCAGAAGCTATGCCTGAAAAGTCATTGATTTACTGTTGGAAAGCTCTTGTTTATCTATCAATGATCAAGTCCAATGTATGAAGATTGATGTGTTTTATATTGGTTTGACTTTATTAGAGCCCTTGAGTTGACTCCATATCAACAATCTCTTTAATTAGGCAATAATCACGGATCTAAATGCCTTGTTGATCAAATGTTTTGGTTAGGTTGCTGCATTATCTCAATGAAAGCCTTACTTTTGCAGCAGCGACGTATCGAAACAGACGCTATCGATGATATCAGGCAATCTCCAAGATGGGTGTACAGAGGTTACTACTGAAACTGGTATGTTTAGAACCAATGAGCAAATATTTGATCAATGGACCTGTCGTTGTTCTTTGCTTCATAGCATTTGTATGACAAGTTGCAAGAACATAAAGGCAATGAAACTGAATGGATGCTATCAAAATGAACTGTGGCTGAGTTAGTTTTGTAGGGACGGATAGATACTTGTAAGTTTTCTTGCTTTGTGAGAGAGATTTGTTTATGCAATGAGGAATGAATCCCAAACTAAGAACAAGATTTGTTCATATAAACAAAATGAAAACCCAACTGATAAAAGTGGGTTTGTGTTACTTCTGCTATATATATATATATATATATAGATTGTTAACTGTACAAAGCTGATTCAGAAACAGATACTCTTAGGTAACATTGCATTCATCATCAAAATGTGTGAAAAAGGAATTCATCATTGCACAATCATAGTTCAACTCTCCAATTTGTGCATGTTTTTGCCTGAAACGCAACACTCTGCAACTCAAAAAAGCAGAAGAAAGGCCACAAACAAGAGCAAATGGAAGAGAAGAAGAGCTTACTTACCATTCTTGGTCAATCAACATCTCATCTGTGAGCCCAAATTGTCTCAGCTCGTTCTCTGTGTGGTGTAGCAGCAAAGTGTACCTACAAAGAGAAACGGGTTCGAATCGTAATCGTGATCGTTGTTGTCGATGAAAAGTATGTCATACCTTCCGCCAAAGCCTTTCTCCATGACAATCATTTTACCATTGCCCAAATTGTTGAGTCTTTCGTATTGATCCACAGTCCATTTGTACCATCTCATGAGAAAGACTCTGAGAGTGAGGCCATGGGAGACAAGGACCAAGTTCATGTTGGGGTTTCTCTGCCCTGGCGGCTGAAACCTTCCCACATCAATGTCTGATTTTAATGTTTCTCTGAAACCTGTTTGTTTTGTTTCAGTACAGAAAGAAATTGTCGAAGAACTTAGAGATTCTTGGTTTAGGGGTTTGTACCAGTGATTCTGTCATAAACATCCGCAGCCGATTCTCCATTTGGAAAACGGTAGAAAAATCGACCGTATAG mRNA sequence ATGAATGTACCTGATATTAGGTTGGAAGAAGATAATATATGCTACATATTCAGCGACGTATCGAAACAGACGCTATCGATGATATCAGGCAATCTCCAAGATGGGTGTACAGAGGTTACTACTGAAACTGCAGCAAAGTGTACCTACAAAGAGAAACGGGTTCGAATCGTAATCGTGATCGTTGTTGTCGATGAAAAGTATGTCATACCTTCCGCCAAAGCCTTTCTCCATGACAATCATTTTACCATTGCCCAAATTGTTGAGTCTTTCGTATTGATCCACAGTCCATTTGTACCATCTCATGAGAAAGACTCTGAGAGTGAGGCCATGGGAGACAAGGACCAAGTTCATGTTGGGGTTTCTCTGCCCTGGCGGCTGAAACCTTCCCACATCAATTACAGAAAGAAATTGTCGAAGAACTTAGAGATTCTTGGTTTAGGGGTTTGTACCAGTGATTCTGTCATAAACATCCGCAGCCGATTCTCCATTTGGAAAACGGTAGAAAAATCGACCGTATAG Coding sequence (CDS) ATGAATGTACCTGATATTAGGTTGGAAGAAGATAATATATGCTACATATTCAGCGACGTATCGAAACAGACGCTATCGATGATATCAGGCAATCTCCAAGATGGGTGTACAGAGGTTACTACTGAAACTGCAGCAAAGTGTACCTACAAAGAGAAACGGGTTCGAATCGTAATCGTGATCGTTGTTGTCGATGAAAAGTATGTCATACCTTCCGCCAAAGCCTTTCTCCATGACAATCATTTTACCATTGCCCAAATTGTTGAGTCTTTCGTATTGATCCACAGTCCATTTGTACCATCTCATGAGAAAGACTCTGAGAGTGAGGCCATGGGAGACAAGGACCAAGTTCATGTTGGGGTTTCTCTGCCCTGGCGGCTGAAACCTTCCCACATCAATTACAGAAAGAAATTGTCGAAGAACTTAGAGATTCTTGGTTTAGGGGTTTGTACCAGTGATTCTGTCATAAACATCCGCAGCCGATTCTCCATTTGGAAAACGGTAGAAAAATCGACCGTATAG Protein sequence MNVPDIRLEEDNICYIFSDVSKQTLSMISGNLQDGCTEVTTETAAKCTYKEKRVRIVIVIVVVDEKYVIPSAKAFLHDNHFTIAQIVESFVLIHSPFVPSHEKDSESEAMGDKDQVHVGVSLPWRLKPSHINYRKKLSKNLEILGLGVCTSDSVINIRSRFSIWKTVEKSTV
Homology
BLAST of Carg02547 vs. NCBI nr
Match: KAG7036023.1 (hypothetical protein SDJN02_02823, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 344.4 bits (882), Expect = 5.8e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query: 1 MNVPDIRLEEDNICYIFSDVSKQTLSMISGNLQDGCTEVTTETAAKCTYKEKRVRIVIVI 60
MNVPDIRLEEDNICYIFSDVSKQTLSMISGNLQDGCTEVTTETAAKCTYKEKRVRIVIVI
Sbjct: 1 MNVPDIRLEEDNICYIFSDVSKQTLSMISGNLQDGCTEVTTETAAKCTYKEKRVRIVIVI 60
Query: 61 VVVDEKYVIPSAKAFLHDNHFTIAQIVESFVLIHSPFVPSHEKDSESEAMGDKDQVHVGV 120
VVVDEKYVIPSAKAFLHDNHFTIAQIVESFVLIHSPFVPSHEKDSESEAMGDKDQVHVGV
Sbjct: 61 VVVDEKYVIPSAKAFLHDNHFTIAQIVESFVLIHSPFVPSHEKDSESEAMGDKDQVHVGV 120
Query: 121 SLPWRLKPSHINYRKKLSKNLEILGLGVCTSDSVINIRSRFSIWKTVEKSTV 173
SLPWRLKPSHINYRKKLSKNLEILGLGVCTSDSVINIRSRFSIWKTVEKSTV
Sbjct: 121 SLPWRLKPSHINYRKKLSKNLEILGLGVCTSDSVINIRSRFSIWKTVEKSTV 172
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAG7036023.1 | 5.8e-91 | 100.00 | hypothetical protein SDJN02_02823, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
