Carg02544 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02544
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CCT domain-containing protein
Location	Carg_Chr02: 8172685 .. 8173926 (+)
RNA-Seq Expression	Carg02544
Synteny	Carg02544

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTGATCTGTTCGTTCATGGCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCGCCTCTGATTTAGTCTTCCCATCTGATGCAGACTTCCAATTCTTAACCGGATCTTGTTCCCCTAATTTCTCCGATCACGGCATTGATCTTCACGTTTATTACCCTCATCAAAACCCACTCCCCGCCGATGAATCCAATTCCAATTCAAACTCCAATTCCGTCGATCAACTCATTCCGATCCCGGAGTTATCTCTCATCCCAGATTCCTGTTCTTCCCCAAATGGGTTTCAAAATCTCTCAAATTTCGATGTAAAAAACGAAGAATCCCATCTGGGTTTCAACCAACCCCCACTCTGTTTCGACCCATCTGATCATAATAATAATAACAACAACCATAATGCCGCCACCGTCGACAAATCCCTGCTCCACAGAAGTCGCATGGAGTCTCTTTTAATGGAGTCCGTGTCACCAAATTTCCCCAATCAGTCCCTCCCCTGTTCAGAATCAGAGTTCTTCTCCTCCCAAATCCGTCGCGTTTTCAGCACCGGCGATTTACAGGTATGGCATGTTATATATATTTTGGGGAGAAACCCATTTACGGTTGGTAGTAAATGTTTGAATATGGGGGCAGAATTCAAGCATGGGACGGTCGAGGACAGGGTGCGGGCAAGGGTCGTTCTCGAGTCCATTATCAGAGAACGGAAGCTTAGAAGAGGGGAATTTCAAAGTGGGACGGTACAGTGCAGAGGAGAGAAAAGAGAGGATTTCAAAATACAGAGCAAAACGAAGGCAGAGGAATTTCAACAAGACGATCAAGGTTAGTATAGCAGAACTGAATTCAAAAACAAAAACGGTTTTCAGAGATTGAGGATGCCGCATTAATGGGGAGTTTCGGATGAACTGAACAGTATGCTTGCCGGAAAACACTCGCCGACAACCGCCCCAGAATACGTGGCAGATTTGCTCGCAATGACGAACCCGGAGACAGCTCCAAACCTTCTTCTTCAACCAGAGAAGAAGACGAAGATGATTTCTGGGTAAAAATCTCTTCTTTTTCTTTTTTATTTTATTTATTTAATGAGAAAAAAAATTCATATCTTGTTTGAATGCAGATGGAACGCTTGCATGCAGGGGAAGAAGTGTACGGACAAGTGCAGTTTCAGTATTGTGAATTTTGATCGCAGCTGGAAGGAGAAGAAGATAAAGAAATATATA

mRNA sequence

ATGTCTTCTGATCTGTTCGTTCATGGCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCGCCTCTGATTTAGTCTTCCCATCTGATGCAGACTTCCAATTCTTAACCGGATCTTGTTCCCCTAATTTCTCCGATCACGGCATTGATCTTCACGTTTATTACCCTCATCAAAACCCACTCCCCGCCGATGAATCCAATTCCAATTCAAACTCCAATTCCGTCGATCAACTCATTCCGATCCCGGAGTTATCTCTCATCCCAGATTCCTGTTCTTCCCCAAATGGGTTTCAAAATCTCTCAAATTTCGATGTAAAAAACGAAGAATCCCATCTGGGTTTCAACCAACCCCCACTCTGTTTCGACCCATCTGATCATAATAATAATAACAACAACCATAATGCCGCCACCGTCGACAAATCCCTGCTCCACAGAAGTCGCATGGAGTCTCTTTTAATGGAGTCCGTGTCACCAAATTTCCCCAATCAGTCCCTCCCCTGTTCAGAATCAGAGTTCTTCTCCTCCCAAATCCGTCGCGTTTTCAGCACCGGCGATTTACAGAATTCAAGCATGGGACGGTCGAGGACAGGGTGCGGGCAAGGGTCGTTCTCGAGTCCATTATCAGAGAACGGAAGCTTAGAAGAGGGGAATTTCAAAGTGGGACGGTACAGTGCAGAGGAGAGAAAAGAGAGGATTTCAAAATACAGAGCAAAACGAAGGCAGAGGAATTTCAACAAGACGATCAAGTATGCTTGCCGGAAAACACTCGCCGACAACCGCCCCAGAATACGTGGCAGATTTGCTCGCAATGACGAACCCGGAGACAGCTCCAAACCTTCTTCTTCAACCAGAGAAGAAGACGAAGATGATTTCTGGATGGAACGCTTGCATGCAGGGGAAGAAGTGTACGGACAAGTGCAGTTTCAGTATTGTGAATTTTGATCGCAGCTGGAAGGAGAAGAAGATAAAGAAATATATA

Coding sequence (CDS)

ATGTCTTCTGATCTGTTCGTTCATGGCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTTTCGTTGTTCCGCCTCTGATTTAGTCTTCCCATCTGATGCAGACTTCCAATTCTTAACCGGATCTTGTTCCCCTAATTTCTCCGATCACGGCATTGATCTTCACGTTTATTACCCTCATCAAAACCCACTCCCCGCCGATGAATCCAATTCCAATTCAAACTCCAATTCCGTCGATCAACTCATTCCGATCCCGGAGTTATCTCTCATCCCAGATTCCTGTTCTTCCCCAAATGGGTTTCAAAATCTCTCAAATTTCGATGTAAAAAACGAAGAATCCCATCTGGGTTTCAACCAACCCCCACTCTGTTTCGACCCATCTGATCATAATAATAATAACAACAACCATAATGCCGCCACCGTCGACAAATCCCTGCTCCACAGAAGTCGCATGGAGTCTCTTTTAATGGAGTCCGTGTCACCAAATTTCCCCAATCAGTCCCTCCCCTGTTCAGAATCAGAGTTCTTCTCCTCCCAAATCCGTCGCGTTTTCAGCACCGGCGATTTACAGAATTCAAGCATGGGACGGTCGAGGACAGGGTGCGGGCAAGGGTCGTTCTCGAGTCCATTATCAGAGAACGGAAGCTTAGAAGAGGGGAATTTCAAAGTGGGACGGTACAGTGCAGAGGAGAGAAAAGAGAGGATTTCAAAATACAGAGCAAAACGAAGGCAGAGGAATTTCAACAAGACGATCAAGTATGCTTGCCGGAAAACACTCGCCGACAACCGCCCCAGAATACGTGGCAGATTTGCTCGCAATGACGAACCCGGAGACAGCTCCAAACCTTCTTCTTCAACCAGAGAAGAAGACGAAGATGATTTCTGGATGGAACGCTTGCATGCAGGGGAAGAAGTGTACGGACAAGTGCAGTTTCAGTATTGTGAATTTTGA

Protein sequence

MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLHVYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHLGFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFWMERLHAGEEVYGQVQFQYCEF

Homology

[Close]

BLAST of Carg02544 vs. NCBI nr
Match: KAG7036026.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 621.7 bits (1602), Expect = 3.5e-174
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH
Sbjct: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60

Query: 61  VYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHL 120
           VYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHL
Sbjct: 61  VYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHL 120

Query: 121 GFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSESEF 180
           GFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSESEF
Sbjct: 121 GFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSESEF 180

Query: 181 FSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERI 240
           FSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERI
Sbjct: 181 FSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERI 240

Query: 241 SKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFW 300
           SKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFW
Sbjct: 241 SKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFW 300

Query: 301 MERLHAGEEVYGQVQFQYCEF 322
           MERLHAGEEVYGQVQFQYCEF
Sbjct: 301 MERLHAGEEVYGQVQFQYCEF 321

[Close]

BLAST of Carg02544 vs. NCBI nr
Match: KAG6606079.1 (Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 619.0 bits (1595), Expect = 2.3e-173
Identity = 320/321 (99.69%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH
Sbjct: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60

Query: 61  VYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHL 120
           VYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHL
Sbjct: 61  VYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHL 120

Query: 121 GFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSESEF 180
           GFNQPPLCFDPSDHNNNNNN+NAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSESEF
Sbjct: 121 GFNQPPLCFDPSDHNNNNNNNNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSESEF 180

Query: 181 FSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERI 240
           FSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERI
Sbjct: 181 FSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERI 240

Query: 241 SKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFW 300
           SKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFW
Sbjct: 241 SKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFW 300

Query: 301 MERLHAGEEVYGQVQFQYCEF 322
           MERLHAGEEVYGQVQFQYCEF
Sbjct: 301 MERLHAGEEVYGQVQFQYCEF 321

[Close]

BLAST of Carg02544 vs. NCBI nr
Match: XP_022996097.1 (zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima])

HSP 1 Score: 562.4 bits (1448), Expect = 2.5e-156
Identity = 303/331 (91.54%), Postives = 307/331 (92.75%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLFVHGD   SSSS SSSSSSLFRCSASDLVFPSDADFQFL GSCSPNFSDHGIDLH
Sbjct: 1   MSSDLFVHGD---SSSSPSSSSSSLFRCSASDLVFPSDADFQFLIGSCSPNFSDHGIDLH 60

Query: 61  VYYPHQNPLPADE--SNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEES 120
            YYPHQNPLPADE  SNSNSNSNSVDQLIPIPEL+LIPDSCSSPNGFQNLSNFDVKNEES
Sbjct: 61  FYYPHQNPLPADESNSNSNSNSNSVDQLIPIPELALIPDSCSSPNGFQNLSNFDVKNEES 120

Query: 121 HLGFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSES 180
           HLGFNQPPLCFDPSDHNNN    NAATV KSLLHRSR+ESL+MESVSPNFPNQSLPCSES
Sbjct: 121 HLGFNQPPLCFDPSDHNNN----NAATVGKSLLHRSRVESLIMESVSPNFPNQSLPCSES 180

Query: 181 EFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKE 240
           EFFSSQIRRVFSTGDLQNSSMGRSR GCGQGSFSSPL ENGSLEEGNFKVGRYSAEERKE
Sbjct: 181 EFFSSQIRRVFSTGDLQNSSMGRSRPGCGQGSFSSPLLENGSLEEGNFKVGRYSAEERKE 240

Query: 241 RISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDD 300
           RISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDD
Sbjct: 241 RISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDD 300

Query: 301 FW-MERLHAGE-------EVYGQVQFQYCEF 322
           FW M RLHAGE       E+YGQVQFQYCEF
Sbjct: 301 FWQMGRLHAGEEERTQYKEMYGQVQFQYCEF 324

[Close]

BLAST of Carg02544 vs. NCBI nr
Match: XP_023534139.1 (putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414.1 bits (1063), Expect = 1.1e-111
Identity = 248/350 (70.86%), Postives = 263/350 (75.14%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLF+HGD        SSSSSSLFRCS+SDLVFPSDA+ QF +   SPNFSD  ID+ 
Sbjct: 1   MSSDLFIHGD--------SSSSSSLFRCSSSDLVFPSDAELQFFSDPYSPNFSDSAIDV- 60

Query: 61  VYYPHQNPLPADESNSNSNS--------NSVDQLIPIPELS---------LIPDSCSSPN 120
                 NPL A+E NSNSNS        N +DQ IP+  LS         L   S SS N
Sbjct: 61  -----LNPL-AEEFNSNSNSNPNLNPNPNPLDQFIPMQGLSLSHGNDFPLLADPSSSSSN 120

Query: 121 GFQNLSNFDVKNEESHLGFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHR---------- 180
           GFQNLSNF + +      FNQ PLCFDP  +         A  DKS LHR          
Sbjct: 121 GFQNLSNFHLNSN----SFNQ-PLCFDPIQN---------AAADKSFLHRSFSEKPGFLG 180

Query: 181 --SRMESLLMESVSPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSF 240
             SR+ESLLM+  SPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSF
Sbjct: 181 GQSRLESLLMD--SPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSF 240

Query: 241 SSPLSENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRI 300
           SSPLSENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRI
Sbjct: 241 SSPLSENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRI 300

Query: 301 RGRFARNDEPGDSSKPSSSTREEDEDDFWMERLHAGEEVYGQVQFQYCEF 322
           RGRFARNDEPGDSSKPSSSTREEDED+FWMERLHAGEE+YGQVQFQYCEF
Sbjct: 301 RGRFARNDEPGDSSKPSSSTREEDEDEFWMERLHAGEEMYGQVQFQYCEF 319

[Close]

BLAST of Carg02544 vs. NCBI nr
Match: XP_038874875.1 (uncharacterized protein LOC120067375 [Benincasa hispida])

HSP 1 Score: 343.6 bits (880), Expect = 1.9e-90
Identity = 224/356 (62.92%), Postives = 241/356 (67.70%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLF+HGD        SSSSSSLFRCS+SDLVFPSDA+ QF +   SPNFSD  +D+ 
Sbjct: 1   MSSDLFIHGD--------SSSSSSLFRCSSSDLVFPSDAELQFFSDHYSPNFSDSAVDIL 60

Query: 61  VYYPHQ-NPLPADESNSNSNSNSVDQLIPIPELS---------LIPDSCSSPNGFQNLSN 120
              P Q NPLP        NSNS+D  IP+  LS         L   S SS NGFQNLSN
Sbjct: 61  NSIPSQENPLP-----DGFNSNSIDHFIPMQGLSLSHPTDFHLLSHPSSSSSNGFQNLSN 120

Query: 121 FDVKNEESHLGFNQPPLCFDPSDHNNNNNNHNAATVDKS-LLHR---------SRMESLL 180
           FDVK+EES LGFNQ PLCFDP   N        A VDKS LLHR         SR+ESLL
Sbjct: 121 FDVKSEESLLGFNQ-PLCFDPPSENAATAT-ATAVVDKSLLLHRSFSEKPGFQSRLESLL 180

Query: 181 MESVSPNFPN--QSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSEN 240
           ME  SPNFPN   SLPC ES+FFSSQIRRVFSTGDLQNS MGR               EN
Sbjct: 181 ME--SPNFPNNHHSLPCPESDFFSSQIRRVFSTGDLQNSGMGR--------------MEN 240

Query: 241 GS--LEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFA 300
           GS  +EEGNFKVGRYSAEERKERI KYRAKR QRNFNKTIKYACRKTLADNRPRIRGRFA
Sbjct: 241 GSSLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIRGRFA 300

Query: 301 RNDEPGDSSKPSSSTREEDEDDFWMERLHAGE-----------EVYGQVQFQYCEF 322
           RNDEPG+  K + STREEDEDDFW+E LH GE           EVYG++QFQYC F
Sbjct: 301 RNDEPGEIPKAACSTREEDEDDFWIEGLHGGEEEGTMRGKQFGEVYGRMQFQYCGF 325

[Close]

BLAST of Carg02544 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-06
Identity = 26/54 (48.15%), Postives = 39/54 (72.22%), Query Frame = 0


Query: 232 SAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSS 286
           ++ ER+ R+ +YR KR+ R F KTI+YA RK  A+ RPRI+GRFA+  +  +S+
Sbjct: 291 TSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESN 344

[Close]

BLAST of Carg02544 vs. ExPASy Swiss-Prot
Match: Q9FHH8 (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-06
Identity = 26/49 (53.06%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 232 SAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDE 281
           S+ +R+ R+ +YR KR+ R F KTI+YA RK  A++RPRI+GRFA+  E
Sbjct: 281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329

[Close]

BLAST of Carg02544 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.5e-05
Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 0


Query: 232 SAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSST 291
           S  +R+ R+ +YR K++ R F KTI+YA RK  A+ RPRI+GRFA+  +  + +  + ST
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFST 341

[Close]

BLAST of Carg02544 vs. ExPASy Swiss-Prot
Match: O82117 (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 175 CSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAE 234
           C   +  +S +R   ST DL  ++ G            SP++ +  +    F      A 
Sbjct: 223 CGVPDITTSYLRSSKSTIDLFTAAAG------------SPVAAHSIMSPPQF----MGAI 282

Query: 235 ERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDE 281
           +R+ R+ +YR KR+ R F KTI+YA RK  A+ RPRI+GRFA+  +
Sbjct: 283 DREARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSD 312

[Close]

BLAST of Carg02544 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.5e-05
Identity = 26/49 (53.06%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 232 SAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDE 281
           S  ER+ R+ +YR KR+ R F KTI+YA RK  A+ RPRI+GRFA+  +
Sbjct: 225 SPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

[Close]

BLAST of Carg02544 vs. ExPASy TrEMBL
Match: A0A6J1K0Z6 (zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC111491413 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 1.2e-156
Identity = 303/331 (91.54%), Postives = 307/331 (92.75%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLFVHGD   SSSS SSSSSSLFRCSASDLVFPSDADFQFL GSCSPNFSDHGIDLH
Sbjct: 1   MSSDLFVHGD---SSSSPSSSSSSLFRCSASDLVFPSDADFQFLIGSCSPNFSDHGIDLH 60

Query: 61  VYYPHQNPLPADE--SNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEES 120
            YYPHQNPLPADE  SNSNSNSNSVDQLIPIPEL+LIPDSCSSPNGFQNLSNFDVKNEES
Sbjct: 61  FYYPHQNPLPADESNSNSNSNSNSVDQLIPIPELALIPDSCSSPNGFQNLSNFDVKNEES 120

Query: 121 HLGFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHRSRMESLLMESVSPNFPNQSLPCSES 180
           HLGFNQPPLCFDPSDHNNN    NAATV KSLLHRSR+ESL+MESVSPNFPNQSLPCSES
Sbjct: 121 HLGFNQPPLCFDPSDHNNN----NAATVGKSLLHRSRVESLIMESVSPNFPNQSLPCSES 180

Query: 181 EFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKE 240
           EFFSSQIRRVFSTGDLQNSSMGRSR GCGQGSFSSPL ENGSLEEGNFKVGRYSAEERKE
Sbjct: 181 EFFSSQIRRVFSTGDLQNSSMGRSRPGCGQGSFSSPLLENGSLEEGNFKVGRYSAEERKE 240

Query: 241 RISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDD 300
           RISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDD
Sbjct: 241 RISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDD 300

Query: 301 FW-MERLHAGE-------EVYGQVQFQYCEF 322
           FW M RLHAGE       E+YGQVQFQYCEF
Sbjct: 301 FWQMGRLHAGEEERTQYKEMYGQVQFQYCEF 324

[Close]

BLAST of Carg02544 vs. ExPASy TrEMBL
Match: A0A1S3AUB2 (uncharacterized protein LOC103482769 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482769 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 6.0e-87
Identity = 217/360 (60.28%), Postives = 239/360 (66.39%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLF+HGD        SSSSSSLFRCS+SDLVFPSDAD QF +   SPNFSD  ID+ 
Sbjct: 1   MSSDLFIHGD--------SSSSSSLFRCSSSDLVFPSDADLQFFSDPYSPNFSDSAIDIL 60

Query: 61  VYYPHQ----NPLPADESNSNSNSNSVDQLIPI---------PELSLIPD-SCSSPNGFQ 120
              P Q    NPLP DE NSN NS S+D  IP+         P+  L+P+ S SS NGFQ
Sbjct: 61  NSIPSQSQQENPLP-DEFNSN-NSISIDNFIPMQGLSLSHPTPDFHLLPNPSPSSSNGFQ 120

Query: 121 NLSNFDVKNEESHLGFNQPPLC-FDPSDHNNNNNNHNAATVDKS-LLHRS---------R 180
           NL+NFDVKNEES LGFN PPLC  DP ++           VDKS LLHRS         R
Sbjct: 121 NLTNFDVKNEESLLGFNNPPLCSLDPPEN-----------VDKSLLLHRSFSEKPNFQTR 180

Query: 181 MESLLMESVSPNFPN--QSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSS 240
           +E+ LME  S  FPN   SLPC ES+FFSSQIRRVFSTGDLQNS  GRS           
Sbjct: 181 LETFLME--SQKFPNNHHSLPCPESDFFSSQIRRVFSTGDLQNSGNGRS----------- 240

Query: 241 PLSENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRG 300
                  +EEGNFKVGRYSAEERKERI KYRAKR QRNFNKTIKYACRKTLADNRPRIRG
Sbjct: 241 -----SLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIRG 300

Query: 301 RFARNDEPGDSSKPSSSTREEDEDDFWMERLHAGE------------EVYGQVQFQYCEF 322
           RFARNDEPG+  K + STREEDEDDFW+E LH  E            E+YG++QFQYC F
Sbjct: 301 RFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGKQYGEMYGRMQFQYCGF 321

[Close]

BLAST of Carg02544 vs. ExPASy TrEMBL
Match: A0A6J1EQ84 (putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita moschata OX=3662 GN=LOC111435633 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.0e-86
Identity = 215/352 (61.08%), Postives = 236/352 (67.05%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLF+HGD        SSSSSSLFRCS+SDLVFPSDA+ QF +   SPNFSD  ID+ 
Sbjct: 55  MSSDLFIHGD--------SSSSSSLFRCSSSDLVFPSDAELQFFSDPYSPNFSDSAIDV- 114

Query: 61  VYYPHQNPLPADESNSNSNS--------NSVDQLIPIPELS---------LIPDSCSSPN 120
                 NPL A+E NSNSNS        N +DQ IP+  LS         L   S SS N
Sbjct: 115 -----LNPL-AEEFNSNSNSNPNLNQNPNPLDQFIPMQGLSLSHGNDFPLLADPSSSSSN 174

Query: 121 GFQNLSNFDVKNEESHLGFNQPPLCFDPSDHNNNNNNHNAATVDKSLLHR---------- 180
           GFQNLSNF + +      FNQ PLCFDP +       + AA  DKS LHR          
Sbjct: 175 GFQNLSNFHLNSN----SFNQ-PLCFDPIE-------NAAAAADKSFLHRSFSEKPGFLG 234

Query: 181 --SRMESLLMESVSPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSF 240
             SR+ESLLM+  SPNFPNQSLPC ES+FFSSQIRRVFS GDLQNS  GR          
Sbjct: 235 GQSRLESLLMD--SPNFPNQSLPCPESDFFSSQIRRVFSAGDLQNSGRGR---------- 294

Query: 241 SSPLSENGS--LEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRP 300
               SENGS  +EEGNFKVGRYSAEERKERISKYRAKR QRN+NKTIKYACRKTLADNRP
Sbjct: 295 ----SENGSSLMEEGNFKVGRYSAEERKERISKYRAKRTQRNYNKTIKYACRKTLADNRP 354

Query: 301 RIRGRFARNDEPGDSSKPSSSTREEDEDDFWMERLHAGEEVYGQVQFQYCEF 322
           RIRGRFARNDEPG+  K + STREEDEDDFW+E    G EVYGQ+QFQYC F
Sbjct: 355 RIRGRFARNDEPGEIPKAACSTREEDEDDFWIEGKEYG-EVYGQMQFQYCGF 362

[Close]

BLAST of Carg02544 vs. ExPASy TrEMBL
Match: A0A1S3ATQ3 (uncharacterized protein LOC103482769 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482769 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.5e-85
Identity = 217/361 (60.11%), Postives = 239/361 (66.20%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           MSSDLF+HGD        SSSSSSLFRCS+SDLVFPSDAD QF +   SPNFSD  ID+ 
Sbjct: 1   MSSDLFIHGD--------SSSSSSLFRCSSSDLVFPSDADLQFFSDPYSPNFSDSAIDIL 60

Query: 61  VYYPHQ----NPLPADESNSNSNSNSVDQLIPI---------PELSLIPD-SCSSPNGFQ 120
              P Q    NPLP DE NSN NS S+D  IP+         P+  L+P+ S SS NGFQ
Sbjct: 61  NSIPSQSQQENPLP-DEFNSN-NSISIDNFIPMQGLSLSHPTPDFHLLPNPSPSSSNGFQ 120

Query: 121 NLSNFDVKNEESHLGFNQPPLC-FDPSDHNNNNNNHNAATVDKS-LLHRS---------R 180
           NL+NFDVKNEES LGFN PPLC  DP ++           VDKS LLHRS         R
Sbjct: 121 NLTNFDVKNEESLLGFNNPPLCSLDPPEN-----------VDKSLLLHRSFSEKPNFQTR 180

Query: 181 MESLLMESVSPNFPN--QSLPCSESEFFSSQIRRVFSTGDL-QNSSMGRSRTGCGQGSFS 240
           +E+ LME  S  FPN   SLPC ES+FFSSQIRRVFSTGDL QNS  GRS          
Sbjct: 181 LETFLME--SQKFPNNHHSLPCPESDFFSSQIRRVFSTGDLQQNSGNGRS---------- 240

Query: 241 SPLSENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIR 300
                   +EEGNFKVGRYSAEERKERI KYRAKR QRNFNKTIKYACRKTLADNRPRIR
Sbjct: 241 ------SLMEEGNFKVGRYSAEERKERILKYRAKRTQRNFNKTIKYACRKTLADNRPRIR 300

Query: 301 GRFARNDEPGDSSKPSSSTREEDEDDFWMERLHAGE------------EVYGQVQFQYCE 322
           GRFARNDEPG+  K + STREEDEDDFW+E LH  E            E+YG++QFQYC 
Sbjct: 301 GRFARNDEPGEIPKAACSTREEDEDDFWIEGLHGSEEEGTIRSGKQYGEMYGRMQFQYCG 322

[Close]

BLAST of Carg02544 vs. ExPASy TrEMBL
Match: A0A6J1H3Y2 (zinc finger protein CO3-like OS=Cucurbita moschata OX=3662 GN=LOC111459776 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 9.6e-85
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 156 MESLLMESVSPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPL 215
           MESLLMESVSPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPL
Sbjct: 1   MESLLMESVSPNFPNQSLPCSESEFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPL 60

Query: 216 SENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRF 275
           SENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRF
Sbjct: 61  SENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRF 120

Query: 276 ARNDEPGDSSKPSSSTREEDEDDFWMERLHAGEEVYGQVQFQYCEF 322
           ARNDEPGDSSKPSSSTREEDEDDFWMERLHAGEEVYGQVQFQYCEF
Sbjct: 121 ARNDEPGDSSKPSSSTREEDEDDFWMERLHAGEEVYGQVQFQYCEF 166

[Close]

BLAST of Carg02544 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.4e-34
Identity = 131/319 (41.07%), Postives = 173/319 (54.23%), Query Frame = 0


Query: 1   MSSDLFVHGDSSSSSSSSSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFSDHGIDLH 60
           M SDL++   SSSSSS   S+   +F   +SD    +D         C+  + +  +D H
Sbjct: 1   MDSDLYIFDGSSSSSSICHSTDPDMF---SSDTTTTTDL-------YCNNPYLNPSMDDH 60

Query: 61  VYYPHQNPLPADESNSNSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFDVKNEESHL 120
                   L   ES + +  + +    PI +L  +  + +  N F N S F+        
Sbjct: 61  ------QSLSFFESFTPTTHHILSSSPPISQLQTL--TLTHTNSFPNFSGFE-------- 120

Query: 121 GFNQPPLCFDPSDHNNNNNNHNAATV-DKSLLHRSRMESLLMESVSPNFPNQSLPCS-ES 180
                                N  TV  + LL  S  ++  ME  S NF NQ+L  S E 
Sbjct: 121 ---------------------NFDTVKTEQLLFNSPFDAPFMED-SSNFQNQNLLNSPED 180

Query: 181 EFFSSQIRRVFSTGDLQNSSMGRSRTGCGQGSFSSPLSENGSL------EEGNFKVGRYS 240
            FFS  +RRV+STGDLQN  +GR  T  GQ S+SSPL+   S       +E + +VGRYS
Sbjct: 181 SFFSDHMRRVYSTGDLQN--LGRDFT--GQRSYSSPLAAESSPTTVFSGDEQSLRVGRYS 240

Query: 241 AEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSS-T 300
           +EERKE+ISKYRAKR QRNF KTIKYACRKTLADNRPR+RGRFARNDE  ++ K +SS T
Sbjct: 241 SEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENPKIASSFT 267

Query: 301 REEDEDDFW-MERLHAGEE 310
           R+E++DD W ++ LH  EE
Sbjct: 301 RQENDDDLWNLDGLHEEEE 267

[Close]

BLAST of Carg02544 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 126.3 bits (316), Expect = 4.3e-29
Identity = 121/306 (39.54%), Postives = 165/306 (53.92%), Query Frame = 0


Query: 18  SSSSSSSLFRCSASDLVFPSDADFQFLTGSCSPNFS-DHGIDLHVYYPHQNPLPADESNS 77
           SSSSSSS+FR S+ D+ F SD          +  +S +  +++  ++  Q+ L +   + 
Sbjct: 13  SSSSSSSVFRNSSPDM-FSSDTTTTTDLFCNNELYSVEESLNIFDHFTPQHILSSSPPSD 72

Query: 78  NSNSNSVDQLIPIPELSLIPDSCSSPNGFQNLSNFD----VKNEESHLGFNQPPLCFDPS 137
              + S+ Q IP     L P          N S+F     VK E+   G NQ        
Sbjct: 73  LLGTLSLSQHIP---TGLYP----------NFSDFQISDAVKTEKFFDGHNQAATMARSY 132

Query: 138 DHNNNNNNHNAATVDKSLLHRSRME----SLLMESVSPNFPNQSLPCSESEFFSSQIRRV 197
               N+  +   +   + +   + +      +M+S + ++ N S P  E+ FFSSQ+RRV
Sbjct: 133 STIENSGRYMQRSFSSNSVEGKQTQVPFNIPMMDSSNLSYNNLSSP--ENAFFSSQMRRV 192

Query: 198 FSTGDLQNS-SMGRSRTGCGQGSFSSPLSENGSL---EEGNFKVGRYSAEERKERISKYR 257
           +STGDLQN+  M RS             SEN ++   EE NFKVGRYSAEERKE+ISKYR
Sbjct: 193 YSTGDLQNNMEMQRS-------------SENSTMPFSEEQNFKVGRYSAEERKEKISKYR 252

Query: 258 AKRRQRNFNKTIKYACRKTLADNRPRIRGRFARNDEPGDSSKPSSSTREEDEDDFW-MER 310
           AKR QRNF KTIKYACRKTLAD+RPRIRGRFARNDE  +         E+D+ + W ++ 
Sbjct: 253 AKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVE-----IPNIEDDDSELWKLDG 284

[Close]

BLAST of Carg02544 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 90.9 bits (224), Expect = 2.0e-18
Identity = 66/147 (44.90%), Postives = 85/147 (57.82%), Query Frame = 0


Query: 138 NNNHNAATVDKSLLHRSRMESLLME-SVSPNFPNQSLPCSESEFFSSQ---IRRVFSTGD 197
           N    +++ D      S  ESL+M+ SVS +        +  +F +     +RR  S GD
Sbjct: 70  NGGGGSSSCDSPSSMGSGGESLVMQRSVSSHNGFSGNYTAAHDFVNDDDGPVRRALSAGD 129

Query: 198 LQNSSMGRSRTGCGQGSFSSPLSENGSLEEGNFKVGRYSAEERKERISKYRAKRRQRNFN 257
           L  SS   S         S+  SE+ ++ EG  K  +YS EE+KE+I KYR+KR  RNFN
Sbjct: 130 LPRSSRRES---------STVWSESNAIIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFN 189

Query: 258 KTIKYACRKTLADNRPRIRGRFARNDE 281
           K IKY CRKTLAD+RPRIRGRFARNDE
Sbjct: 190 KRIKYECRKTLADSRPRIRGRFARNDE 207

[Close]

BLAST of Carg02544 vs. TAIR 10
Match: AT1G04500.1 (CCT motif family protein )

HSP 1 Score: 89.7 bits (221), Expect = 4.5e-18
Identity = 48/84 (57.14%), Postives = 67/84 (79.76%), Query Frame = 0


Query: 216 SENGSLEEGNF-KVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGR 275
           +E   L++ +F KVG+ SAE+RKE+I +Y  KR +RNF+K IKYACRKTLAD+RPR+RGR
Sbjct: 267 TEITGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGR 326

Query: 276 FARNDEPGDSSKPSSSTREEDEDD 299
           FA+NDE G+ ++ + S+  ED+DD
Sbjct: 327 FAKNDEFGEPNRQACSSHHEDDDD 350

[Close]

BLAST of Carg02544 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 89.7 bits (221), Expect = 4.5e-18
Identity = 60/139 (43.17%), Postives = 84/139 (60.43%), Query Frame = 0


Query: 166 PNFPNQSLPCSESEFF-SSQIRRVFSTGDLQNSSMG----RSRTGCGQGSFS-SPLSENG 225
           P+ P          FF    I+R+F+  DLQ +  G    +S     Q   +  P+  NG
Sbjct: 235 PHDPLMDFQADNGGFFCPDSIKRMFNPEDLQKALGGGAENQSHLVTPQAHPALGPVDING 294

Query: 226 SLEEGNFKVGRYSAEERKERISKYRAKRRQRNFNKTIKYACRKTLADNRPRIRGRFARND 285
             +    KVG+ S E+RKE+I +Y  KR +RNFNK IKYACRKTLAD+RPR+RGRFA+ND
Sbjct: 295 LEDSTLNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKND 354

Query: 286 EPGDSSKPSSSTREEDEDD 299
           E G+ ++ + S+  +DED+
Sbjct: 355 EFGEPNRQAFSSHHDDEDE 373

The following BLAST results are available for this feature:

BLAST of Carg02544 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7036026.1	3.5e-174	100.00	Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606079.1	2.3e-173	99.69	Zinc finger protein CO3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022996097.1	2.5e-156	91.54	zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima]	[more]
XP_023534139.1	1.1e-111	70.86	putative zinc finger protein CONSTANS-LIKE 11 [Cucurbita pepo subsp. pepo]	[more]
XP_038874875.1	1.9e-90	62.92	uncharacterized protein LOC120067375 [Benincasa hispida]	[more]

BLAST of Carg02544 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940T9	8.6e-06	48.15	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
Q9FHH8	8.6e-06	53.06	Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2...	[more]
O50055	1.5e-05	43.33	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
O82117	2.5e-05	33.96	Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=...	[more]
Q9SK53	2.5e-05	53.06	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]

BLAST of Carg02544 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K0Z6	1.2e-156	91.54	zinc finger protein CONSTANS-LIKE 9-like OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A1S3AUB2	6.0e-87	60.28	uncharacterized protein LOC103482769 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1EQ84	1.0e-86	61.08	putative zinc finger protein CONSTANS-LIKE 11 OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3ATQ3	1.5e-85	60.11	uncharacterized protein LOC103482769 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1H3Y2	9.6e-85	100.00	zinc finger protein CO3-like OS=Cucurbita moschata OX=3662 GN=LOC111459776 PE=4 ...	[more]

BLAST of Carg02544 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63820.1	3.4e-34	41.07	CCT motif family protein	[more]
AT5G41380.1	4.3e-29	39.54	CCT motif family protein	[more]
AT5G59990.1	2.0e-18	44.90	CCT motif family protein	[more]
AT1G04500.1	4.5e-18	57.14	CCT motif family protein	[more]
AT2G33350.1	4.5e-18	43.17	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 236..278 e-value: 2.1E-17 score: 62.9
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 236..278 score: 15.735335
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 269..298
None	No IPR available	PANTHER	PTHR31319:SF46	CCT MOTIF FAMILY PROTEIN	coord: 67..312
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 67..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02544-RA	Carg02544-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding