Carg02477 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02477
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ATP-dependent Clp protease proteolytic subunit
Location	Carg_Chr02: 8522639 .. 8525535 (+)
RNA-Seq Expression	Carg02477
Synteny	Carg02477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGTGCTGTATCATCTTCTTCGGAATCGGGAGTTCTGTCATCGACTCAAAATGGCCGCCTCTTCTACTCCGTGCTTTCAACCGCAAATTATAACCTCTCAGTCTCCGCTCAGGTTCTTCCTCTCTCTTCTGGTTAACTGTTAAAATTGATGCTTTTCGCGACGCTTACCTGATTTTCTTTCTTTTTTTTTGAATTTTGTAAGCCCTGCGACGAAGGTTTACTCGGGATTAAAGCTTCAATCTGCTAGTGGGCTTGCTTTCCTTTCCTTCTCATGGTGTCATTCATCTATTTGTCCGCCGCTTAATTACGTATTGCTTTCCTTTGTTTTTTTTTTTTTTTTTTTTTAAGGTCCATTTGGAGGAGCGAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTCTACAATCCAGGTAATTGCAGCTCTAGCTAAGCCTACATCCTAGTTTCATTAATTTTCTGAGCGGGGAAGTATATCCTTAAATATTCTGTTACATTCTGGTGATATTAATCAATTGAAAAGCTTGGACTTTCATAACATGCTATACTTTCAAGGATGAAGGAGAAGAAGTATAAAATTGCTAACTTATTTTCACATGGATCATTTGTTTTCTTCATGGAACATTTTCCTTGTTTTCAAAATCATGAGCTATAATGGCACGGAGACTGGAGAGGTTGACTTGATATCCCTCCTTATTGAGCTTGGCTTAATGGTAATTGACATGTACCCTCTAATATTTTCCTGACATCTTTTTCCCTCAAATTGTAAAGTGAAACTTGTGATTATGGAGATTTAAGCCAATTATACCAGTTGCTGCTTCCTCTAATATTCTCTCGACATCTTTTCCCCTCAAATTTTCATATTTCCTTTCAATTAGACATGCATTCAATTTTTGCTTATCCCTTCTGATAACAAAAGCTAAAGAGAAGTAAAAAGAGAAGATATTCAGTTTTATCCTATCCTACATATATTCTTCTAATTCGTTACTTTACGTGCAGTACAAATAACAAGAAGGCATCCCGTATGCAGTTTCAGATGATGCCTATCGGGACACCAAGGGTGCCTTACAGAAATCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTTGTAAGTGATACATCTTCTTATGCACTTTTTGTGCGATACAGTCTAATGTCACTTGATATTTAATTACTCAGACTGAGCAAAAATACAGTTCAGCAATATGAGACTCACGAGTTCCAATGGCTATAATTATATCAAAGTAAACTGTTCTCTACTATACGTGTTTAATGTAAAAATCAACTTTTTTATTTTTAATAATCTCTACTATATGAAGATTTTTCCCCATAATCTCTATGTTTTTCGTGTGTCTAGTATCGAGAACGAGTTATCTTCATCGGGCAAAACATTGATGAAGAGTTTAGCAATCAAATTTTGGCCACCATGCTATATCTCGACAGCATTGAATCTTCCAAGACACTCTATATGTACATAAATGGTCCAGGTGGAGATGTGAGTTCAATCTTTTTTCTTTTTTGGGATAAATTCCATAATTGTCTGTTATATTTTCCTTCTATTGGGAATATCCTATTGGTTTGTTTAGCATTATTTTTCTGATGATATCATGATCTTTGCAGTTAACTCCGAGTTTGGCCATCTACGACACAATGCAGAGCTTGAAGAGTTCAGTACGTACCCATTGCGTGGGTTATGCCTATGATCTAGCAGCATTTCTTCTAGCAGCTGGAGAAAAGGTAAATACAGATTTTAGCTAGCATTATCAAATAAAATTAGTACCGTAAGGCAATGGATGTTGTTTGAAAGATGACTTTGGAATTTGTCGGGAGTTCTTCTTCAGTATGGTAAAACGTATCCCCTATTTTTTCTTCCAGTCAAATCAATTTTTGATCCATTTGAACAAATCTTAATGCGACCTGATCAATAAGTTTCTACCCTTAATTTGCATTGGATAAATTAGGCAACGCCTTATTCCTTTTACCCATATCTGCCTTCTATCTATTTGGCTGAACCTACTTATTTTCTTCATGTTCTTTTAAATCTAACAACACATTTCCTTGTTATTAAGGGTCACCGCACTGCAATGCCTCTATCAAGAATTGCTTTACAATCCCCAGGTGGAGCTGCTCGTGGCCAGGTAACACTAATTTGTTTCATCATGTCATGCAAACTGATCGTATATGCCTTTCTATAAGTTCTAAACATTTTTGTTTGAAAATCTTTTGATAGGCTGATGATGTTCGAAACGAAGCAAATGAGCTCTTGAGAATCAGGGATTATCTTTTCAATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAACAGGTCAGTTTGTCTGGCACCATGGCATACATACAATATCTTCATTCATAGTGTAACTTTCCACTACCAGACATGAGTTATAACCCACTTGACTTTTTGGTTTATGAAACATGAGGTTTTACAAACTTGCAAAAATTAACACATCCATAGTTCGCTAATGCCATTCTTGAATCTTACGTCAAATTAAACTTAAAATATTTCTCAGAAATACAACCTTAACACCTTGTAAATGGACAAATGCAGATTAACAAGGACCTGAGTCGAATGAAGCGATTTAATGCTCAGGCAGCTCTTGAGTACGGTCTTATCGACCGTATAGTCAGGCCAGCTCGCATTAAGGCCGATGCACCACGCAAGGATGATGGAGCAGGGCTTGGTTAAAGTAAGATTAATTATTGTCTTCACATTGGAAGTAGCACATGTTTGCTTTAGGGTTACATGGCACACAACTAAGTAATTAGAATTTATGTATGGAAGTTCAAATCTTGTTTTTCATCCATTAATTTAAATGGAAGCTCTGTGGAAATGGTATGAATTTTATTATTCTTTTCCC

mRNA sequence

AAGGTGCTGTATCATCTTCTTCGGAATCGGGAGTTCTGTCATCGACTCAAAATGGCCGCCTCTTCTACTCCGTGCTTTCAACCGCAAATTATAACCTCTCAGTCTCCGCTCAGCCCTGCGACGAAGGTTTACTCGGGATTAAAGCTTCAATCTGCTAGTCCATTTGGAGGAGCGAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTCTACAATCCAGTACAAATAACAAGAAGGCATCCCGTATGCAGTTTCAGATGATGCCTATCGGGACACCAAGGGTGCCTTACAGAAATCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTTTATCGAGAACGAGTTATCTTCATCGGGCAAAACATTGATGAAGAGTTTAGCAATCAAATTTTGGCCACCATGCTATATCTCGACAGCATTGAATCTTCCAAGACACTCTATATGTACATAAATGGTCCAGGTGGAGATTTAACTCCGAGTTTGGCCATCTACGACACAATGCAGAGCTTGAAGAGTTCAGTACGTACCCATTGCGTGGGTTATGCCTATGATCTAGCAGCATTTCTTCTAGCAGCTGGAGAAAAGGGTCACCGCACTGCAATGCCTCTATCAAGAATTGCTTTACAATCCCCAGGTGGAGCTGCTCGTGGCCAGGCTGATGATGTTCGAAACGAAGCAAATGAGCTCTTGAGAATCAGGGATTATCTTTTCAATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAACAGATTAACAAGGACCTGAGTCGAATGAAGCGATTTAATGCTCAGGCAGCTCTTGAGTACGGTCTTATCGACCGTATAGTCAGGCCAGCTCGCATTAAGGCCGATGCACCACGCAAGGATGATGGAGCAGGGCTTGGTTAAAGTAAGATTAATTATTGTCTTCACATTGGAAGTAGCACATGTTTGCTTTAGGGTTACATGGCACACAACTAAGTAATTAGAATTTATGTATGGAAGTTCAAATCTTGTTTTTCATCCATTAATTTAAATGGAAGCTCTGTGGAAATGGTATGAATTTTATTATTCTTTTCCC

Coding sequence (CDS)

ATGGCCGCCTCTTCTACTCCGTGCTTTCAACCGCAAATTATAACCTCTCAGTCTCCGCTCAGCCCTGCGACGAAGGTTTACTCGGGATTAAAGCTTCAATCTGCTAGTCCATTTGGAGGAGCGAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTCTACAATCCAGTACAAATAACAAGAAGGCATCCCGTATGCAGTTTCAGATGATGCCTATCGGGACACCAAGGGTGCCTTACAGAAATCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTTTATCGAGAACGAGTTATCTTCATCGGGCAAAACATTGATGAAGAGTTTAGCAATCAAATTTTGGCCACCATGCTATATCTCGACAGCATTGAATCTTCCAAGACACTCTATATGTACATAAATGGTCCAGGTGGAGATTTAACTCCGAGTTTGGCCATCTACGACACAATGCAGAGCTTGAAGAGTTCAGTACGTACCCATTGCGTGGGTTATGCCTATGATCTAGCAGCATTTCTTCTAGCAGCTGGAGAAAAGGGTCACCGCACTGCAATGCCTCTATCAAGAATTGCTTTACAATCCCCAGGTGGAGCTGCTCGTGGCCAGGCTGATGATGTTCGAAACGAAGCAAATGAGCTCTTGAGAATCAGGGATTATCTTTTCAATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAACAGATTAACAAGGACCTGAGTCGAATGAAGCGATTTAATGCTCAGGCAGCTCTTGAGTACGGTCTTATCGACCGTATAGTCAGGCCAGCTCGCATTAAGGCCGATGCACCACGCAAGGATGATGGAGCAGGGCTTGGTTAA

Protein sequence

MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSSTNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG

Homology

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BLAST of Carg02477 vs. NCBI nr
Match: XP_022957748.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita moschata] >KAG6606148.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036093.1 ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 568.5 bits (1464), Expect = 3.2e-158
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS
Sbjct: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL
Sbjct: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ
Sbjct: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG
Sbjct: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 285

[Close]

BLAST of Carg02477 vs. NCBI nr
Match: XP_022995667.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 563.5 bits (1451), Expect = 1.0e-156
Identity = 281/285 (98.60%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MAASSTPCFQPQIITSQSP+SPATKVYSGLKLQSASPFGGAKPNLT EFYGKVHKSLQSS
Sbjct: 1   MAASSTPCFQPQIITSQSPISPATKVYSGLKLQSASPFGGAKPNLTVEFYGKVHKSLQSS 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIESSK LYMY+NGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL
Sbjct: 121 LATMLYLDSIESSKALYMYLNGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ
Sbjct: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG
Sbjct: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 285

[Close]

BLAST of Carg02477 vs. NCBI nr
Match: XP_022158384.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Momordica charantia])

HSP 1 Score: 503.1 bits (1294), Expect = 1.6e-138
Identity = 251/285 (88.07%), Postives = 264/285 (92.63%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MA SS+PC QPQI  SQ PLS ATK+YSGLKLQSA PFGGAKPNLT EFYGKVHKSL S 
Sbjct: 1   MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSR 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           T+NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIE+SK LYMYINGPGGDLTPS+AIYDTMQSLKS V THCVGYAY+LAAFLL
Sbjct: 121 LATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKG+R AMPLSRIALQSP GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEK 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Sbjct: 241 INKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of Carg02477 vs. NCBI nr
Match: XP_038906920.1 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 501.1 bits (1289), Expect = 6.2e-138
Identity = 250/285 (87.72%), Postives = 263/285 (92.28%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MA SSTPC QPQI  SQ PLS  TKVYSGLK QSASPFGGAKPNLTAEFYGKVHKSLQ+ 
Sbjct: 1   MAVSSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQAR 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
             NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  AQNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIE+SK LYMYINGPGGDLTPS+AIYDTMQSLKS V THCVGYAY+LAAFLL
Sbjct: 121 LATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKG+R AMPLSRIALQSP GAARGQADD++NEANELLRIRDYL++ELSKKTGQPVE+
Sbjct: 181 AAGEKGNRCAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEK 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           IN+DLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Sbjct: 241 INEDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of Carg02477 vs. NCBI nr
Match: XP_008437161.1 (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 488.8 bits (1257), Expect = 3.2e-134
Identity = 241/285 (84.56%), Postives = 260/285 (91.23%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MA SSTPCFQPQI  SQ  LS  TKVYSGLK QSASPFGG KPN+TAEFYGKVHKSLQ+ 
Sbjct: 1   MAVSSTPCFQPQIKVSQPSLSFTTKVYSGLKPQSASPFGGVKPNITAEFYGKVHKSLQAR 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           T+NKKA+R QFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIE+S+  YMYINGPGGDLTP++A+YDTMQSL S V THCVGYAY++AAFLL
Sbjct: 121 LATMLYLDSIETSRKFYMYINGPGGDLTPTMALYDTMQSLNSPVATHCVGYAYNMAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKG+R AMPLSRIALQSP G+ARGQADD++NEANELLRIRDYLF ELSKKTGQPVE+
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLFEELSKKTGQPVEK 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           I+KDLSR+K FNAQ AL+YGLIDRI RP RIKADAPRKD G GLG
Sbjct: 241 ISKDLSRLKPFNAQEALDYGLIDRIARPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of Carg02477 vs. ExPASy Swiss-Prot
Match: Q9XJ36 (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 1.2e-112
Identity = 205/271 (75.65%), Postives = 231/271 (85.24%), Query Frame = 0


Query: 17  QSPLSP--ATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSSTNNKKASRMQFQMM 76
           Q  LSP  + K+YSGLK QSAS       NL  EFYG+V+KSLQS T   KASR + +MM
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTG--KASRSRVKMM 70

Query: 77  PIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESSK 136
           PIGTPRVPYRN  EGTWQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD+++ S+
Sbjct: 71  PIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSR 130

Query: 137 TLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPLS 196
            +YMY+NGPGGDLTPSLAIYDTM+SLKS V THCVG AY+LA FLLAAGEKGHR AMPLS
Sbjct: 131 RIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLS 190

Query: 197 RIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNAQ 256
           RIALQSP GAARGQADD++NEA EL RIRDYLFNEL+K TGQP E++ KDLSR+KRFNA+
Sbjct: 191 RIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAE 250

Query: 257 AALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
            A+EYGLID+IVRP RIK DAPR+D+ AGLG
Sbjct: 251 EAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279

[Close]

BLAST of Carg02477 vs. ExPASy Swiss-Prot
Match: Q8DJZ9 (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.2e-55
Identity = 103/193 (53.37%), Postives = 136/193 (70.47%), Query Frame = 0


Query: 74  MPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESS 133
           MPIG P+VPYR PGE   QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60

Query: 134 KTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPL 193
           K + +YIN PGG +T  +AIYDTMQ +KS V T CVG A  + +FLLAAG KG R A+P 
Sbjct: 61  KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 194 SRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNA 253
           SRI +  P G  RGQA D+  EA E+LR+R  L    +  TGQP+E+I +D+ R    +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSA 180

Query: 254 QAALEYGLIDRIV 267
           + A  YGLIDR++
Sbjct: 181 EEAKNYGLIDRVI 193

[Close]

BLAST of Carg02477 vs. ExPASy Swiss-Prot
Match: Q8YP43 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=clpP3 PE=3 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.0e-54
Identity = 103/193 (53.37%), Postives = 135/193 (69.95%), Query Frame = 0


Query: 74  MPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESS 133
           MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 134 KTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPL 193
           K +Y+YIN PGG +T  LAIYDTMQ +KS V T CVG A  + +FLLAAG KG R A+P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120

Query: 194 SRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNA 253
           SRI +  P G  RGQA D+  EA E+LRIR  L    +  T QP+ +I KD+ R    +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSA 180

Query: 254 QAALEYGLIDRIV 267
           Q A+EYGLIDR++
Sbjct: 181 QEAMEYGLIDRVI 193

[Close]

BLAST of Carg02477 vs. ExPASy Swiss-Prot
Match: Q3MDK7 (ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=clpP2 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.8e-54
Identity = 103/193 (53.37%), Postives = 134/193 (69.43%), Query Frame = 0


Query: 74  MPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESS 133
           MPIG P+VPYR PG     W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 134 KTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPL 193
           K +Y+YIN PGG +T  LAIYDTMQ +KS V T CVG A  + +FLLAAG KG R A+P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 194 SRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNA 253
           SRI +  P G  RGQA D+  EA E+LRIR  L    +  T QP+ +I KD+ R    +A
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSA 180

Query: 254 QAALEYGLIDRIV 267
           Q A EYGLIDR++
Sbjct: 181 QEAKEYGLIDRVI 193

[Close]

BLAST of Carg02477 vs. ExPASy Swiss-Prot
Match: Q20F17 (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis OX=51324 GN=clpP PE=3 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.0e-51
Identity = 94/192 (48.96%), Postives = 142/192 (73.96%), Query Frame = 0


Query: 74  MPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESS 133
           MPIG P+VP+R PGE + QWVDL+N LYRERV+F+ Q++D+E +NQ++  MLYL++ E S
Sbjct: 1   MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKS 60

Query: 134 KTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPL 193
           K LY+YIN PGG +T  +A+YDTM  +K+ V T CVG A  +A+F+LA G +G R A+P 
Sbjct: 61  KDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPH 120

Query: 194 SRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNA 253
           SRI +  P G +RGQA +V +E+ E++RIR  +    +++TGQP+ +I++DL R +  +A
Sbjct: 121 SRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRISRDLDRDQFLSA 180

Query: 254 QAALEYGLIDRI 266
           + A +YG++D++
Sbjct: 181 REAKDYGIVDQV 192

[Close]

BLAST of Carg02477 vs. ExPASy TrEMBL
Match: A0A6J1H153 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=LOC111459199 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 1.5e-158
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS
Sbjct: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL
Sbjct: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ
Sbjct: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG
Sbjct: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 285

[Close]

BLAST of Carg02477 vs. ExPASy TrEMBL
Match: A0A6J1JZK9 (ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LOC111491133 PE=3 SV=1)

HSP 1 Score: 563.5 bits (1451), Expect = 4.9e-157
Identity = 281/285 (98.60%), Postives = 283/285 (99.30%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MAASSTPCFQPQIITSQSP+SPATKVYSGLKLQSASPFGGAKPNLT EFYGKVHKSLQSS
Sbjct: 1   MAASSTPCFQPQIITSQSPISPATKVYSGLKLQSASPFGGAKPNLTVEFYGKVHKSLQSS 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIESSK LYMY+NGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL
Sbjct: 121 LATMLYLDSIESSKALYMYLNGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ
Sbjct: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG
Sbjct: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 285

[Close]

BLAST of Carg02477 vs. ExPASy TrEMBL
Match: A0A6J1DZ88 (ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN=LOC111024880 PE=3 SV=1)

HSP 1 Score: 503.1 bits (1294), Expect = 7.9e-139
Identity = 251/285 (88.07%), Postives = 264/285 (92.63%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MA SS+PC QPQI  SQ PLS ATK+YSGLKLQSA PFGGAKPNLT EFYGKVHKSL S 
Sbjct: 1   MAVSSSPCLQPQIKVSQPPLSFATKLYSGLKLQSACPFGGAKPNLTVEFYGKVHKSLHSR 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           T+NKKA+R QFQMMPIGTPRVPYR PGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIE+SK LYMYINGPGGDLTPS+AIYDTMQSLKS V THCVGYAY+LAAFLL
Sbjct: 121 LATMLYLDSIETSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVATHCVGYAYNLAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKG+R AMPLSRIALQSP GAARGQADD++NEANELLRIRDYLF+ELSKKTGQPVE+
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFDELSKKTGQPVEK 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           INKDLSRMKRFNAQ AL+YGLIDRIVRP RIKADAPRKD G GLG
Sbjct: 241 INKDLSRMKRFNAQEALDYGLIDRIVRPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of Carg02477 vs. ExPASy TrEMBL
Match: A0A1S3ATH1 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103482668 PE=3 SV=1)

HSP 1 Score: 488.8 bits (1257), Expect = 1.5e-134
Identity = 241/285 (84.56%), Postives = 260/285 (91.23%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MA SSTPCFQPQI  SQ  LS  TKVYSGLK QSASPFGG KPN+TAEFYGKVHKSLQ+ 
Sbjct: 1   MAVSSTPCFQPQIKVSQPSLSFTTKVYSGLKPQSASPFGGVKPNITAEFYGKVHKSLQAR 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           T+NKKA+R QFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDSIE+S+  YMYINGPGGDLTP++A+YDTMQSL S V THCVGYAY++AAFLL
Sbjct: 121 LATMLYLDSIETSRKFYMYINGPGGDLTPTMALYDTMQSLNSPVATHCVGYAYNMAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKG+R AMPLSRIALQSP G+ARGQADD++NEANELLRIRDYLF ELSKKTGQPVE+
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLFEELSKKTGQPVEK 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           I+KDLSR+K FNAQ AL+YGLIDRI RP RIKADAPRKD G GLG
Sbjct: 241 ISKDLSRLKPFNAQEALDYGLIDRIARPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of Carg02477 vs. ExPASy TrEMBL
Match: A0A0A0KKQ7 (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa_5G157950 PE=3 SV=1)

HSP 1 Score: 477.6 bits (1228), Expect = 3.5e-131
Identity = 233/285 (81.75%), Postives = 260/285 (91.23%), Query Frame = 0


Query: 1   MAASSTPCFQPQIITSQSPLSPATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSS 60
           MA +S PC QPQI  SQ  LS ATKVY+GLK QSASPFGGAKPN+TAEFYGKVHKSLQ+ 
Sbjct: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60

Query: 61  TNNKKASRMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120
           TNNKKA+R QFQMMPIGTPRVPY+ PGEG WQWVDLWNALYRERVIFIG  +DEEFSNQI
Sbjct: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120

Query: 121 LATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLL 180
           LATMLYLDS+E+SK LY+YINGPGGDLTP+LA+YDTMQSLKS + THC+G AY++AAFLL
Sbjct: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180

Query: 181 AAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQ 240
           AAGEKG+R+AMPLSRIALQSP G+ARG+ADD++NEAN+LL+IRDYLF+ELSKKTGQPVE+
Sbjct: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240

Query: 241 INKDLSRMKRFNAQAALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
           I+KDLS  KRFNAQ ALEYGLIDRI RPARIKADAPRKDDG GLG
Sbjct: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 285

[Close]

BLAST of Carg02477 vs. TAIR 10
Match: AT1G12410.1 (CLP protease proteolytic subunit 2 )

HSP 1 Score: 407.5 bits (1046), Expect = 8.7e-114
Identity = 205/271 (75.65%), Postives = 231/271 (85.24%), Query Frame = 0


Query: 17  QSPLSP--ATKVYSGLKLQSASPFGGAKPNLTAEFYGKVHKSLQSSTNNKKASRMQFQMM 76
           Q  LSP  + K+YSGLK QSAS       NL  EFYG+V+KSLQS T   KASR + +MM
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTG--KASRSRVKMM 70

Query: 77  PIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESSK 136
           PIGTPRVPYRN  EGTWQWVD+WNALYRERVIFIGQNIDEEFSNQILATMLYLD+++ S+
Sbjct: 71  PIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSR 130

Query: 137 TLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPLS 196
            +YMY+NGPGGDLTPSLAIYDTM+SLKS V THCVG AY+LA FLLAAGEKGHR AMPLS
Sbjct: 131 RIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLS 190

Query: 197 RIALQSPGGAARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNAQ 256
           RIALQSP GAARGQADD++NEA EL RIRDYLFNEL+K TGQP E++ KDLSR+KRFNA+
Sbjct: 191 RIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAE 250

Query: 257 AALEYGLIDRIVRPARIKADAPRKDDGAGLG 286
            A+EYGLID+IVRP RIK DAPR+D+ AGLG
Sbjct: 251 EAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279

[Close]

BLAST of Carg02477 vs. TAIR 10
Match: ATCG00670.1 (plastid-encoded CLP P )

HSP 1 Score: 165.2 bits (417), Expect = 7.5e-41
Identity = 78/193 (40.41%), Postives = 124/193 (64.25%), Query Frame = 0


Query: 74  MPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESS 133
           MPIG P+VP+R+PGEG   WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL   + +
Sbjct: 1   MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60

Query: 134 KTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPL 193
           K LY++IN PGG +   +AIYDTMQ ++  V+T C+G A  +A+F+L  G    R A P 
Sbjct: 61  KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120

Query: 194 SRIALQSPGGA-ARGQADDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFN 253
           +R+ +  P  +    Q  +   EA ELL++R+ +     ++TG+P+  I++D+ R    +
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180

Query: 254 AQAALEYGLIDRI 266
           A  A  +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193

[Close]

BLAST of Carg02477 vs. TAIR 10
Match: AT1G02560.1 (nuclear encoded CLP protease 5 )

HSP 1 Score: 142.1 bits (357), Expect = 6.8e-34
Identity = 71/167 (42.51%), Postives = 110/167 (65.87%), Query Frame = 0


Query: 100 LYRERVIFIGQNIDEEFSNQILATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQS 159
           L++ R+I  G  +D++ +N I+A +LYLD+++ +K + MY+N PGG +T  +AI+DTM+ 
Sbjct: 119 LFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRH 178

Query: 160 LKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANEL 219
           ++  V T CVG A  + AFLL+AG KG R ++P SRI +  P G A+G   D+  +ANE+
Sbjct: 179 IRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEM 238

Query: 220 LRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNAQAALEYGLIDRIV 267
           L  +  L   L+  TGQ +E+IN+D  R    +A+ A EYGLID ++
Sbjct: 239 LHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

[Close]

BLAST of Carg02477 vs. TAIR 10
Match: AT5G23140.1 (nuclear-encoded CLP protease P7 )

HSP 1 Score: 137.1 bits (344), Expect = 2.2e-32
Identity = 76/227 (33.48%), Postives = 131/227 (57.71%), Query Frame = 0


Query: 55  KSLQSSTNNKKAS----RMQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQ 114
           K L S+ ++   S    R  + ++P+    + + + GE  +   D+++ L +ER+I I  
Sbjct: 10  KMLSSTPSSMATSIATGRRSYSLIPM---VIEHSSRGERAY---DIFSRLLKERIICING 69

Query: 115 NIDEEFSNQILATMLYLDSIESSKTLYMYINGPGGDLTPSLAIYDTMQSLKSSVRTHCVG 174
            I+++ S+ ++A +LYL+S   SK ++MY+N PGG +T  LAIYDTMQ ++S + T C+G
Sbjct: 70  PINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLG 129

Query: 175 YAYDLAAFLLAAGEKGHRTAMPLSRIALQSPGGAARGQADDVRNEANELLRIRDYLFNEL 234
            A  +A+ LLAAG KG R ++P + + +  P G   GQA D+     +++R+ D L    
Sbjct: 130 QAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELY 189

Query: 235 SKKTGQPVEQINKDLSRMKRFNAQAALEYGLIDRIV--RPARIKADA 276
            K TGQP++ +  ++ R      + A  +G+ID ++  RP  +  DA
Sbjct: 190 VKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVIDERPLELVKDA 230

[Close]

BLAST of Carg02477 vs. TAIR 10
Match: AT1G66670.1 (CLP protease proteolytic subunit 3 )

HSP 1 Score: 129.0 bits (323), Expect = 5.9e-30
Identity = 65/190 (34.21%), Postives = 109/190 (57.37%), Query Frame = 0


Query: 90  TWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSIESSKTLYMYINGPGGDLTP 149
           +++ +D  N L R+R++F+G  +D+  ++ +++ +L LD+ +S + + ++IN PGG +T 
Sbjct: 80  SFEELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITA 139

Query: 150 SLAIYDTMQSLKSSVRTHCVGYAYDLAAFLLAAGEKGHRTAMPLSRIALQSPGGAARGQA 209
            + IYD M+  K+ V T C+G A  + AFLLA+G KG R  MP S++ +  P G A G+A
Sbjct: 140 GMGIYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKA 199

Query: 210 DDVRNEANELLRIRDYLFNELSKKTGQPVEQINKDLSRMKRFNAQAALEYGLIDRIVRPA 269
            ++     E++  +  L    S+ TG+P  +I  D  R    N   A EYGLID ++   
Sbjct: 200 TEMSIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDG 259

Query: 270 RIKADAPRKD 280
           +    AP  D
Sbjct: 260 KPGLIAPIGD 269

The following BLAST results are available for this feature:

BLAST of Carg02477 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957748.1	3.2e-158	100.00	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_022995667.1	1.0e-156	98.60	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic-...	[more]
XP_022158384.1	1.6e-138	88.07	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_038906920.1	6.2e-138	87.72	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
XP_008437161.1	3.2e-134	84.56	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl...	[more]

BLAST of Carg02477 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ36	1.2e-112	75.65	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
Q8DJZ9	5.2e-55	53.37	ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatu...	[more]
Q8YP43	2.0e-54	53.37	Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain ...	[more]
Q3MDK7	5.8e-54	53.37	ATP-dependent Clp protease proteolytic subunit 2 OS=Trichormus variabilis (strai...	[more]
Q20F17	2.0e-51	48.96	ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis OX=5...	[more]

BLAST of Carg02477 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H153	1.5e-158	100.00	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1JZK9	4.9e-157	98.60	ATP-dependent Clp protease proteolytic subunit OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1DZ88	7.9e-139	88.07	ATP-dependent Clp protease proteolytic subunit OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3ATH1	1.5e-134	84.56	ATP-dependent Clp protease proteolytic subunit OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KKQ7	3.5e-131	81.75	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus OX=3659 GN=Csa...	[more]

BLAST of Carg02477 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12410.1	8.7e-114	75.65	CLP protease proteolytic subunit 2	[more]
ATCG00670.1	7.5e-41	40.41	plastid-encoded CLP P	[more]
AT1G02560.1	6.8e-34	42.51	nuclear encoded CLP protease 5	[more]
AT5G23140.1	2.2e-32	33.48	nuclear-encoded CLP protease P7	[more]
AT1G66670.1	5.9e-30	34.21	CLP protease proteolytic subunit 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 166..183 score: 48.75 coord: 95..110 score: 44.53 coord: 244..263 score: 42.0 coord: 135..155 score: 47.98 coord: 187..206 score: 33.38
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 77..269 score: 32.401051
IPR001907	ATP-dependent Clp protease proteolytic subunit	CDD	cd07017	S14_ClpP_2	coord: 95..265 e-value: 6.67543E-83 score: 245.044
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 92..267 e-value: 4.7E-61 score: 205.9
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 9..279
None	No IPR available	GENE3D	3.90.226.10		coord: 65..274 e-value: 3.8E-58 score: 198.4
None	No IPR available	PANTHER	PTHR10381:SF46	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC	coord: 9..279
IPR029045	ClpP/crotonase-like domain superfamily	SUPERFAMILY	52096	ClpP/crotonase	coord: 88..269

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02477-RA	Carg02477-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009368	endopeptidase Clp complex
cellular_component	GO:0009526	plastid envelope
molecular_function	GO:0051117	ATPase binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0004252	serine-type endopeptidase activity