Carg02427 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02427
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ATP-dependent RNA helicase DDX42
Location	Carg_Chr15: 2327095 .. 2331168 (-)
RNA-Seq Expression	Carg02427
Synteny	Carg02427

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTGTTTGCGCCTACTCTTGCAAGTCGCCGCAGCAGCGGCAGCTCCAGAACAAATCTTCGGCCTCTCTGTGTATCAATGGCGAAGGGCGACGATGCGTTGGCGAGAAAAAGGAACAAAGCCTCTCGGAAGAAGCTCCGGAGTAAGAACGGAGACTCCTCGTCTGTTTCTGCGCGCGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTAAGTCCGGCAAACGCAGAAACTGCCAGGTAACTTTGGAAGTATTAATTCTTGTGTGTTTTCATCATATTTTTGGATTTACGAAGTTGCTGTATACTTTAGAGTAGCGTTCTATGCTTGAGGAATGACATTAGTAGAAAAAGGGCTTTTCAGTTTGGATTTATCATTGGTAGGCGAAGTTTATCTTGCTTTAGGGATGATATAACTTATAAATTAGTGTTGTTCGATTCGCAGCTGTACAATATGAAAATGCTTGTCTGCGAAGATGATTTTCCGTGATTGATTTGTTTTAGATCACACTTGGTAACTCGTAAATTAAGTTCGCTGCTCATCATGCTGACTCTTGGGACATTGATTATCCTGATTCGCCGAAATGTTGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAAGTCGTCTCTATTAATTACTCTGACTGTGTAATATACGGAGTCTGAATTCGCTACATTACAGGGAATGTGCTTTAGCCTTCCTACTCTTGATGATCCCTACAATGATAGGAATGGGAACAAGGACTTGGATAAGAAGGAAACTAAGGTCAGGCCTTCAAAAGGCTCCAAGAGGGAATTTCCAAAGGATAAGAGTTCTTTAGCACCTAATAGAACCCGTGGAGACGCTTGCCGTGAGAAAGTTAGGAGTTCAAAAGAAGGGTCTGGAGATGCCACCAGTGGCCACATAGCCAAAAGAAGCAAGACTTGTCCTGAAAGAACAAAAGTTAATGCGAATGTGGAAGGCGGTGTACAAGACTTTCAAGAAGAAGGCTTTGACAGTTCTATCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAAGGCTCTATATCATGATTCTTTCAAAGGGATCAACAAGCCTTTGTCGGCTGATGCCTGGGGCATTGAGTTCTGGAAATGTTATTCTTCTGGGAAGGATATTCTGGACACCAGTGGGTTGTCTTCTACAGATGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAAGAGAAAGAAGGTTTATCATTTAGTAGCCCATATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAGGTTCGCTCCATGTGCAAGCCGTTGAAGGCTCTTGGAGTACATACAGTGAGCATACATTCTGGGGCATCCCTAGACCACCAAATTCAAGGGTAAGCTTGCTCGTGTGTCATGGTATTTTGTAACAGTTTTTTTGTTTGAGACTGAGCTGTGAAATATTTTAGAGTATAAGTTCTTTATTTATTTTCATCTCGTACCTGCCTCTGTTCATACCATGTATATGTATTTAGCACTGTAAACAATTTGGACTCCTTCTGATTTCTCTGTTTTATATCTAATTGGAAAGTTATCTCTCATTCCATAGTTTGAAGAGCTGTGAACCTGAATTTCTCGTGTCCACACCTGAGAGACTCTTAGAGCTCGTTGCCATGCAGGCTATTGATATAGCTGGTGTTTCATTGCTGGTAATTTGACAGTCTATGTTTATTATTTGAAGTATCGTTTTGAATTTTGTATTCTTTATTTTTTGTGATGAATTTTAATGATTATAAAATATTTTTACTGTTTCAGACCTTCTTATCTGGTTATTCGCTGAGGCTTTGTAGATGTCTTTTCCGCAATTAAGGATTAAAATAATTGATGGATATTGAATTGATGATATTAAGATTAATAGATGATATATAATGATCAAGTTCTTTTTACTTTTAAACGAAGTTACAAATCTTGTTTTTAGTATTTATAATAATATTAAGATTAATAGATGATATATATATATATATATATATATATATCTTAGAAAATATCAATTAATTCTTAATATCGATGAATATTTTGATATTTGTTTACAATGCATTGTCTCAATTATAATCCTTCAAGGTCTCTGAAGATGAACAAGTGGCCTGTTTTTACTTTAGAAGTATAGAGTATGTCACAAAATGCTTATTGTCAGTATTATGGACACTCTGCTTTAAGATTTATAATTTCCTTGACGTTTTTCAGGTCGTTGATGGACTGGATTCTTTTTCAAAAGGTGGTTATCTTGAAATGATACAATCCATCAGGAAGTCTATATCAAGCAATCTGCATACTATTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCAGTTGTACAAGATCTCCTCAGTGGCCCAATTCAAAGACTGTCTCTTAATGCTTCTGTGGCCAGTCGAAGTGCCTGCATTATTCAGTCGATAAACTTCTGTACTTCTGAAGAGGAAAAACTATCAAAGGTACGTATGTACATCAACTTCATATACTTCCGTGCAGCCTCCGCATTTGTTAACTGCTGGGAAATCTCTGTTCAGTCTTCCAAAACCGTTTTTTAGAAGGAAAAAACTTATGATGAGTTGTATTTTATTGTGAGCCTGACTTCTTAAACCTTGAGGTAGCAGTCATTTGCCAAGTTATGATGTAAAATGGATAGATGTCGTATCCCAGTTTCTAGGAAATTTTTTATTGTGGATGTGACCCTCACATTCTGATACTGTTCAATCACTTTTGAACTTTTCACTTTTTAGTTGGTAATTCTTACTCCTAAAGTCATAGTTTGCAGCAATAATAAGAAACGAAGCTTCTCCTTTTATCATCGACTTTTCATTTTACTCTCTTACACTAGGATTGGAAGTTCTATTAACAGTCATCATTAATGATCTTTGAAGGTCATCCAAGCTTTGGATAGAGCCAATGGCAGACAGCTCTGCCCACAGCCGTTGAAGATGCTCTTTATTCTTGGGAAGGAGTGTAATGTTCAGGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGATATCGTAGCTGGAGCATTACGTGGTGTCCCAGAAATTAAGAACAAGTAAGCATGCGCATGCCACTAGCTTTTTTAATGCAATTCTAAAGGTTTTTTAAAGGAAAAAATCGAAAATTTCATACTACAAAGAAATATTGTTTTTTAATATAAATATTTTAATTTATTGTTTTTTCCTGAATCATAATTAGCCTTCAAGTAGTTGATTCCTTTCTAATTTCCTACTTGGTTTTTTGAATCTATGTATGGTTGATAAATAAGGATCGGTTTTTTAGCTAGGTACGGAATGTCTTATCAAATATTCAATATGATTCTACAAGATCTAGTTTCGTAAAAGTAACGAATTCTAGCCAATTGAAAGGATCTTCTAATCAATCCAAAGATCATTTTGATTCTATTAGTAATGAGGATTCTGAATATCACACCTCGATCAATCAAAAACATATCGGTCTTTCTAAGATATGCATGTAGAAAGTGATAATGCATCTCATAGCTGGGTAGTGTGCTTTTGAATTTCATTGGTAAATACTGGCACTAGAACTGCGGATCCCAGAAATAGGTCGAGCGTCTTTCAAATGTTTAGTTATTATTAATGCCTCCATTCTTTACTAGGACAAAAGGATTGGCACATGTTTCTTCCTCCAATCATTTTTCATCCATATTTGTATTTATACTTACCAAAAACTCATCTATTTTTACCCTTTTCATCTTTGATTAGTTCGGAAGTAGACAGCAGATCGAGGCCCGTATTAGCCAAGATTGATATGGAGCAAATTAATACCATAGATCTGGGAAATTATGATAGCATATTCATACTCTATGCCTTTCCATCAATAGACAAATATGTTCAGATTTTAACAGGAATGGCTCGTCACACGGTCAATGGTGTGTTGCACACCTTCATTACCAAGGAAGAAGCATCATTTGCTGGTTCCTTGGTTGAAATCCTTCAAGAATGTGGGCAGCCTGTCCCTGAAACTGTAAGAAACTTATCCCTTACACAAGCCACATCTCAATCTTGA

mRNA sequence

CCTTGTTTGCGCCTACTCTTGCAAGTCGCCGCAGCAGCGGCAGCTCCAGAACAAATCTTCGGCCTCTCTGTGTATCAATGGCGAAGGGCGACGATGCGTTGGCGAGAAAAAGGAACAAAGCCTCTCGGAAGAAGCTCCGGAGTAAGAACGGAGACTCCTCGTCTGTTTCTGCGCGCGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTAAGTCCGGCAAACGCAGAAACTGCCAGGGAATGTGCTTTAGCCTTCCTACTCTTGATGATCCCTACAATGATAGGAATGGGAACAAGGACTTGGATAAGAAGGAAACTAAGGTCAGGCCTTCAAAAGGCTCCAAGAGGGAATTTCCAAAGGATAAGAGTTCTTTAGCACCTAATAGAACCCGTGGAGACGCTTGCCGTGAGAAAGTTAGGAGTTCAAAAGAAGGGTCTGGAGATGCCACCAGTGGCCACATAGCCAAAAGAAGCAAGACTTGTCCTGAAAGAACAAAAGTTAATGCGAATGTGGAAGGCGGTGTACAAGACTTTCAAGAAGAAGGCTTTGACAGTTCTATCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAAGGCTCTATATCATGATTCTTTCAAAGGGATCAACAAGCCTTTGTCGGCTGATGCCTGGGGCATTGAGTTCTGGAAATGTTATTCTTCTGGGAAGGATATTCTGGACACCAGTGGGTTGTCTTCTACAGATGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAAGAGAAAGAAGGTTTATCATTTAGTAGCCCATATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAGGTTCGCTCCATGTGCAAGCCGTTGAAGGCTCTTGGAGTACATACAGTGAGCATACATTCTGGGGCATCCCTAGACCACCAAATTCAAGGTTATCTCTCATTCCATAGTTTGAAGAGCTGTGAACCTGAATTTCTCGTGTCCACACCTGAGAGACTCTTAGAGCTCGTTGCCATGCAGGCTATTGATATAGCTGGTGTTTCATTGCTGGTCGTTGATGGACTGGATTCTTTTTCAAAAGGTGGTTATCTTGAAATGATACAATCCATCAGGAAGTCTATATCAAGCAATCTGCATACTATTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCAGTTGTACAAGATCTCCTCAGTGGCCCAATTCAAAGACTGTCTCTTAATGCTTCTGTGGCCAGTCGAAGTGCCTGCATTATTCAGTCGATAAACTTCTGTACTTCTGAAGAGGAAAAACTATCAAAGGTCATCCAAGCTTTGGATAGAGCCAATGGCAGACAGCTCTGCCCACAGCCGTTGAAGATGCTCTTTATTCTTGGGAAGGAGTGTAATGTTCAGGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGATATCGTAGCTGGAGCATTACGTGGTGTCCCAGAAATTAAGAACAATTCGGAAGTAGACAGCAGATCGAGGCCCGTATTAGCCAAGATTGATATGGAGCAAATTAATACCATAGATCTGGGAAATTATGATAGCATATTCATACTCTATGCCTTTCCATCAATAGACAAATATGTTCAGATTTTAACAGGAATGGCTCGTCACACGGTCAATGGTGTGTTGCACACCTTCATTACCAAGGAAGAAGCATCATTTGCTGGTTCCTTGGTTGAAATCCTTCAAGAATGTGGGCAGCCTGTCCCTGAAACTGTAAGAAACTTATCCCTTACACAAGCCACATCTCAATCTTGA

Coding sequence (CDS)

ATGGCGAAGGGCGACGATGCGTTGGCGAGAAAAAGGAACAAAGCCTCTCGGAAGAAGCTCCGGAGTAAGAACGGAGACTCCTCGTCTGTTTCTGCGCGCGTTGCCGCCATAATCGCCGCCAAGAAGCGGCGTAAGTCCGGCAAACGCAGAAACTGCCAGGGAATGTGCTTTAGCCTTCCTACTCTTGATGATCCCTACAATGATAGGAATGGGAACAAGGACTTGGATAAGAAGGAAACTAAGGTCAGGCCTTCAAAAGGCTCCAAGAGGGAATTTCCAAAGGATAAGAGTTCTTTAGCACCTAATAGAACCCGTGGAGACGCTTGCCGTGAGAAAGTTAGGAGTTCAAAAGAAGGGTCTGGAGATGCCACCAGTGGCCACATAGCCAAAAGAAGCAAGACTTGTCCTGAAAGAACAAAAGTTAATGCGAATGTGGAAGGCGGTGTACAAGACTTTCAAGAAGAAGGCTTTGACAGTTCTATCTCTCCCTCAAAGTTTCTTATACTTTGCTTAAATGCAATAGAGAAGGCTCTATATCATGATTCTTTCAAAGGGATCAACAAGCCTTTGTCGGCTGATGCCTGGGGCATTGAGTTCTGGAAATGTTATTCTTCTGGGAAGGATATTCTGGACACCAGTGGGTTGTCTTCTACAGATGAGAAAATTGCATGGGTGGTTTCTTCGGCTGCTGACAGTATTGCTAGAAAAGAGAAAGAAGGTTTATCATTTAGTAGCCCATATCTTTTATTTCTTGTTCCTACCCAAGAGAAAGCTACTCAGGTTCGCTCCATGTGCAAGCCGTTGAAGGCTCTTGGAGTACATACAGTGAGCATACATTCTGGGGCATCCCTAGACCACCAAATTCAAGGTTATCTCTCATTCCATAGTTTGAAGAGCTGTGAACCTGAATTTCTCGTGTCCACACCTGAGAGACTCTTAGAGCTCGTTGCCATGCAGGCTATTGATATAGCTGGTGTTTCATTGCTGGTCGTTGATGGACTGGATTCTTTTTCAAAAGGTGGTTATCTTGAAATGATACAATCCATCAGGAAGTCTATATCAAGCAATCTGCATACTATTGTTTTCAGTGATAGCTTCAGCTGTGCCTATGTCCCAGTTGTACAAGATCTCCTCAGTGGCCCAATTCAAAGACTGTCTCTTAATGCTTCTGTGGCCAGTCGAAGTGCCTGCATTATTCAGTCGATAAACTTCTGTACTTCTGAAGAGGAAAAACTATCAAAGGTCATCCAAGCTTTGGATAGAGCCAATGGCAGACAGCTCTGCCCACAGCCGTTGAAGATGCTCTTTATTCTTGGGAAGGAGTGTAATGTTCAGGAATTAGCTGCTGCTCTTAAATCCAAAGGCCATGATATCGTAGCTGGAGCATTACGTGGTGTCCCAGAAATTAAGAACAATTCGGAAGTAGACAGCAGATCGAGGCCCGTATTAGCCAAGATTGATATGGAGCAAATTAATACCATAGATCTGGGAAATTATGATAGCATATTCATACTCTATGCCTTTCCATCAATAGACAAATATGTTCAGATTTTAACAGGAATGGCTCGTCACACGGTCAATGGTGTGTTGCACACCTTCATTACCAAGGAAGAAGCATCATTTGCTGGTTCCTTGGTTGAAATCCTTCAAGAATGTGGGCAGCCTGTCCCTGAAACTGTAAGAAACTTATCCCTTACACAAGCCACATCTCAATCTTGA

Protein sequence

MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLPTLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGSGDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYHDSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSCEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALDRANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSRPVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEASFAGSLVEILQECGQPVPETVRNLSLTQATSQS

Homology

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BLAST of Carg02427 vs. NCBI nr
Match: KAG7016310.1 (ATP-dependent RNA helicase DDX42 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1103.6 bits (2853), Expect = 0.0e+00
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300
           LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420

Query: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480
           RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR
Sbjct: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480

Query: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540
           PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS
Sbjct: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540

Query: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           FAGSLVEILQECGQPVPETVRNLSLTQATSQS
Sbjct: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 572

[Close]

BLAST of Carg02427 vs. NCBI nr
Match: KAG6578780.1 (ATP-dependent RNA helicase DDX42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1095.9 bits (2833), Expect = 0.0e+00
Identity = 568/572 (99.30%), Postives = 570/572 (99.65%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSS APNRTRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSSAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300
           LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420

Query: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480
           RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVD+RSR
Sbjct: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDNRSR 480

Query: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540
           PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS
Sbjct: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540

Query: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           FAGSLVEIL+ECGQ VPETVRNLSLTQATSQS
Sbjct: 541 FAGSLVEILEECGQAVPETVRNLSLTQATSQS 572

[Close]

BLAST of Carg02427 vs. NCBI nr
Match: XP_022938928.1 (ATP-dependent RNA helicase DDX42 [Cucurbita moschata])

HSP 1 Score: 1062.0 bits (2745), Expect = 1.8e-306
Identity = 556/572 (97.20%), Postives = 558/572 (97.55%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKV PSKGSKREFPKDKSS APNRTRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVTPSKGSKREFPKDKSSSAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNAN EGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANGEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300
           LSFSSPYLLFLVPTQEKAT VRSMCKPLKALGVHTVSIHSGASLDHQIQG      LKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATHVRSMCKPLKALGVHTVSIHSGASLDHQIQG------LKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEE KLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEGKLSKVIQALD 420

Query: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480
           RANG QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSR R
Sbjct: 421 RANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRWR 480

Query: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540
           PV+AKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS
Sbjct: 481 PVVAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540

Query: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           FAGSLVEIL+ECGQ VPETVRNLSLTQATSQS
Sbjct: 541 FAGSLVEILEECGQAVPETVRNLSLTQATSQS 566

[Close]

BLAST of Carg02427 vs. NCBI nr
Match: XP_023550872.1 (ATP-dependent RNA helicase DDX42 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1040.8 bits (2690), Expect = 4.4e-300
Identity = 542/566 (95.76%), Postives = 550/566 (97.17%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNK+SRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKSSRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKE+KVRPSKGSKREFPKDKSS APN TRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKESKVRPSKGSKREFPKDKSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           G+ATSGHIAKRSKTCPERTKVN NVEGGVQ+FQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GNATSGHIAKRSKTCPERTKVNVNVEGGVQNFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300
           LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQG      LKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQG------LKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLN SVASRSACIIQS+NFCTSEEEKLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSLNFCTSEEEKLSKVIQALD 420

Query: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480
           RAN  QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGAL GVPEIKNNSEVDSRSR
Sbjct: 421 RANDSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPEIKNNSEVDSRSR 480

Query: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540
           PV+AKIDMEQINTIDLGNYDSIFILYAFP IDKYVQILTGMARHTVNGVLHTFITKEEAS
Sbjct: 481 PVVAKIDMEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHTFITKEEAS 540

Query: 541 FAGSLVEILQECGQPVPETVRNLSLT 567
           FAGSLVE+L+ECGQ VPETVRN SLT
Sbjct: 541 FAGSLVELLEECGQAVPETVRNSSLT 560

[Close]

BLAST of Carg02427 vs. NCBI nr
Match: XP_022993206.1 (ATP-dependent RNA helicase DDX42 [Cucurbita maxima])

HSP 1 Score: 1040.0 bits (2688), Expect = 7.4e-300
Identity = 544/572 (95.10%), Postives = 553/572 (96.68%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKD SS APN TRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEG VQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGIN+PL ADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300
           LSFSSPYLLFLVPTQEKATQ+RSMCKPLKALGVHTVSIHSGASLDHQIQG      LKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQG------LKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGG LEMIQSIRKSISSNL+T 
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTF 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLN SVASRSACIIQSINF TSEEEKLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALD 420

Query: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480
           RANG QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGAL GVPE+KNNSEVDSRSR
Sbjct: 421 RANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSR 480

Query: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540
           PV+AKID+EQINTIDLGNYDSIFILYAFP IDKYVQILTGMARHTVNGVLH+FITKEEAS
Sbjct: 481 PVVAKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEAS 540

Query: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           FAGSLVEIL+ECGQ VPETVRNLSLT+ATSQS
Sbjct: 541 FAGSLVEILEECGQAVPETVRNLSLTKATSQS 566

[Close]

BLAST of Carg02427 vs. ExPASy Swiss-Prot
Match: Q6CT46 (ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=DBP3 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 1.1e-14
Identity = 111/491 (22.61%), Postives = 213/491 (43.38%), Query Frame = 0


Query: 76  DKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGSGDATSGHIAKRSKTC 135
           DKK         SK++  KDK      + + D   +K +  K+   D       K+S+T 
Sbjct: 8   DKKRKVEDEELKSKKKLKKDKKDKKDKKDKKDKKDKKEKKEKKEKKD-------KKSET- 67

Query: 136 PERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYHDSF-KGINKPLSADA 195
            E    +A+ +  + +F +E   +   PS   I+      +  + D   K I+K      
Sbjct: 68  -ESFAASAS-QSDIDEFLKENEVTVSDPSGSNIVPYLDFSQVSFIDQIQKEISKFPKPTP 127

Query: 196 WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSPYLLFLVPT 255
                W    +GKD++  +   S  +  A+ V +  + +   +K     SS  +L + PT
Sbjct: 128 IQAVSWPYLLAGKDVIGIAETGS-GKTFAFGVPAINNIVTSGDKS----SSVKVLVISPT 187

Query: 256 QEKATQV-RSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSCEPEFLVSTPERLL 315
           +E A+Q+  ++     A G+ +  ++ G   D Q +             + +V+TP RLL
Sbjct: 188 RELASQIYDNLIVLTDACGLRSCCVYGGVPKDQQREDLR--------RSQVVVATPGRLL 247

Query: 316 ELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQS-IRKSISSNLHTIVFSDSFSCAYVP 375
           +L+   ++D++ V+ LV+D  D   + G+ E I+  IR++ S++  T++F+ ++      
Sbjct: 248 DLIEEGSVDLSHVNYLVLDEADRMLEKGFEEDIKKIIRQTRSTSRQTLMFTATWPKEVRE 307

Query: 376 VVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALDRANGRQLCPQPL 435
           +    +S P++    N    S +  I Q +        K  K+++ L + +        +
Sbjct: 308 LASSFMSEPVKVSIGNRDELSANKRITQIVE-VVDPFRKEKKLLELLKKYHSGPTKNDKV 367

Query: 436 KMLFILGKECNVQELAAALKSKGHDIVA--GALRGVPEIKNNSEVDSRSRPVLAKIDMEQ 495
            +  +  KE +   +   LK  G+D+ A  G L      +  +E  +    +L   D+  
Sbjct: 368 LIFALYKKEAS--RVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDV-A 427

Query: 496 INTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEASFAGSLVEILQ 555
              +D+ N  ++  L    +++ YV  +    R    G  HT  T++E   AG+LV +L 
Sbjct: 428 ARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLAGALVNVLN 471

Query: 556 ECGQPVPETVR 562
             GQPVPE ++
Sbjct: 488 GAGQPVPEELK 471

[Close]

BLAST of Carg02427 vs. ExPASy Swiss-Prot
Match: Q10MH8 (DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0308500 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.4e-14
Identity = 108/448 (24.11%), Postives = 193/448 (43.08%), Query Frame = 0


Query: 137 ERTKVNANVEGGVQDFQE------EGFD-----SSISPSKFLILCLNAIEKALYHDSFKG 196
           E+  V+   E  V D+ +       GFD      S +   F +  +NAI K       +G
Sbjct: 186 EKPSVSGMSEQEVADYMKSLAIRVSGFDVPRPIKSFADCGFPVQLMNAIAK-------QG 245

Query: 197 INKPLSADAWGIEFWKCYSSGKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGLSF 256
             KP +     +       SG+DI+    +G   T   +  ++    D    +++EG   
Sbjct: 246 YEKPTTIQCQALPI---VLSGRDIIGIAKTGSGKTAAFVLPMIVHIMDQPELEKEEG--- 305

Query: 257 SSPYLLFLVPTQEKATQVRSMCKPL-KALGVHTVSIHSGASLDHQIQGYLSFHSLKS-CE 316
             P  +   PT+E A Q+    K   K   +   +++ G S   Q      F  LK+ C 
Sbjct: 306 --PIGVVCAPTRELAHQIYLEAKKFAKPYNLRVAAVYGGVSKFDQ------FKELKAGC- 365

Query: 317 PEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIV 376
            E +++TP RL++L+ M+A+ +   + LV+D  D     G+   I+SI   I  +  T++
Sbjct: 366 -EIVIATPGRLIDLLKMKALKMFRATYLVLDEADRMFDLGFEPQIRSIVGQIRPDRQTLL 425

Query: 377 FSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALDR 436
           FS +       + +++L+ PI R+++   V S +  I Q +N   S+ EK+  +++ L  
Sbjct: 426 FSATMPYKVERLAREILTDPI-RVTV-GQVGSANEDIKQVVNVLPSDAEKMPWLLEKLPG 485

Query: 437 ANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVA--GALRGVPEIKNNSEVDSRS 496
                       +L    K+  V E+ + L  +G  I A  G       ++   +  S  
Sbjct: 486 ------MIDDGDVLVFAAKKARVDEIESQLNQRGFRIAALHGDKDQASRMETLQKFKSGV 545

Query: 497 RPVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQIL--TGMARHTVNGVLHTFITKE 556
             VL   D+     +D+ +  ++        +D ++  +  TG A    +G  +T IT++
Sbjct: 546 YHVLVATDV-AARGLDIKSIKTVVNFDIAKEMDMHIHRIGRTGRAGDK-DGTAYTLITQK 600

Query: 557 EASFAGSLVEILQECGQPVPETVRNLSL 566
           E  FAG LV  L   GQ VP  + +L++
Sbjct: 606 EVRFAGELVHCLIAAGQDVPNELMDLAM 600

[Close]

BLAST of Carg02427 vs. ExPASy Swiss-Prot
Match: Q5VQL1 (DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0172200 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 2.4e-14
Identity = 78/336 (23.21%), Postives = 151/336 (44.94%), Query Frame = 0


Query: 233 IARKEKEGLSFSSPYLLFLVPTQEKATQVRSMCKPL-KALGVHTVSIHSGASLDHQIQGY 292
           I  K  +  S   P +L L PT+E ATQ++   K   ++  + +V ++ GA    Q++  
Sbjct: 240 ILLKRLQHNSRDGPTVLVLSPTRELATQIQDEAKKFGRSSRISSVCLYGGAPKGPQLRDL 299

Query: 293 LSFHSLKSCEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRK 352
                      + +V+TP RL +++ M+ + +  VS LV+D  D     G+   I+ I K
Sbjct: 300 -------ERGADIVVATPGRLNDILEMRRVSLHQVSYLVLDEADRMLDMGFEPQIRKIVK 359

Query: 353 SISSNLHTIVFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEE- 412
            +     T++F+ ++      +  DLLS P+Q    N      +  I Q ++  T  E+ 
Sbjct: 360 QVQPKRQTLMFTATWPKEVRKIASDLLSNPVQVNIGNTDQLVANKSITQYVDVITPPEKS 419

Query: 413 -KLSKVIQALDRANGRQLCPQPLKMLFILGKECNVQELAAAL-KSKGHDIVAGALRGVPE 472
            +L +++++ +  +         K++     +    +LA  L +  G   + G       
Sbjct: 420 RRLDQILRSQEPGS---------KIIIFCSTKRMCDQLARNLARQYGASAIHGDKSQAER 479

Query: 473 IKNNSEVDSRSRPVLAKIDMEQINTIDLGNYDSIFILYAFPS-IDKYVQILTGMARHTVN 532
               SE  S   P+L   D+     +D+ +   + + Y FP+ ++ YV  +    R    
Sbjct: 480 DSVLSEFRSGRCPILVATDV-AARGLDIKDI-RVVVNYDFPTGVEDYVHRIGRTGRAGAT 539

Query: 533 GVLHTFITKEEASFAGSLVEILQECGQPVPETVRNL 564
           GV +TF   +++ +A  LV+IL+   Q V + +R++
Sbjct: 540 GVAYTFFCDQDSKYASDLVKILEGANQSVSQQLRDM 557

[Close]

BLAST of Carg02427 vs. ExPASy Swiss-Prot
Match: Q755A5 (ATP-dependent RNA helicase DBP3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DBP3 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-14
Identity = 129/547 (23.58%), Postives = 229/547 (41.86%), Query Frame = 0


Query: 40  AKKRRKSGKRRNCQGMCFSLPTLDDPYNDRNGNKD-LDKKETKVRPS----KGSKREFPK 99
           +K   K  KR++  G        +D    +   KD  DKK+ K +      K  K +  K
Sbjct: 2   SKHELKDKKRKSVDG--------EDVSKSKKVKKDKKDKKDKKAKDGNDKVKDKKDKNKK 61

Query: 100 DKSSLAPNRTRGDACREKVRSSKEGSGDAT--SGHIAKRSKTCPERTKVN---ANVEGGV 159
           DKS    N            S     GD+T  +G++  +      +  V+   +  E  V
Sbjct: 62  DKSKTDKNLKEVQETEAHTGSETAPVGDSTAAAGYVESKELASVPQADVDTFFSENEVAV 121

Query: 160 QDFQEEGFDSSISPSKFLILCLNAIEKALYHDSFKGINKPLSADAWGIEFWKCYSSGKDI 219
           +D +  GF   +S S   +   +AI+K +         KP    A     W    +GKD+
Sbjct: 122 EDPESLGFRPLLSFSHLNL--HSAIQKEI-----SKFPKPTPIQAVS---WPYLLAGKDV 181

Query: 220 LDTSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSP---YLLFLVPTQEKATQV-RSMC 279
           +   G++ T     +     A +    EK     S+P     L + PT+E A+Q+  ++ 
Sbjct: 182 I---GVAETGSGKTFAFGVPAINSLMSEK-----STPRGVKCLVISPTRELASQIYDNLV 241

Query: 280 KPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSCEPEFLVSTPERLLELVAMQAIDIAG 339
           +    +G++   ++ G   D Q +       LK  + + +V+TP RLL+L+   +  +AG
Sbjct: 242 QLTDKVGLNCCCVYGGVQKDSQRE------QLK--KAQVVVATPGRLLDLIEEGSAKLAG 301

Query: 340 VSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSFSCAYVPVVQDLLSGPIQRL 399
           V  LV+D  D   + G+ E I+ I K   S++   +    F+  +   V++L S    R 
Sbjct: 302 VQYLVLDEADRMLEKGFEEDIKRIIKETKSDVRQTLM---FTATWPKEVRELAS-TFMRA 361

Query: 400 SLNASVASRSACIIQSINFCTSEEEKLSKVIQALDRANGRQLCPQPLK------------ 459
            +  S+ +R            S  +++++V++ +D     +   + LK            
Sbjct: 362 PVKVSIGNRDE---------LSANKRITQVVEVIDPFKKEKRLLELLKQYQSGAKKNDKV 421

Query: 460 MLFILGKECNVQELAAALKSKGHDIVA--GALRGVPEIKNNSEVDSRSRPVLAKIDMEQI 519
           ++F L K+     +   LK  G+++ A  G L      +  SE  + +  +L   D+   
Sbjct: 422 LIFALYKK-EASRVERNLKYNGYNVAAIHGDLSQQQRTQALSEFKAGTANLLLATDV-AA 481

Query: 520 NTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEASFAGSLVEILQE 559
             +D+ N  ++  L    +++ YV  +    R    GV HT  T++E   AG+LV +L  
Sbjct: 482 RGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGATGVAHTLFTEQEKHLAGALVNVLNG 499

[Close]

BLAST of Carg02427 vs. ExPASy Swiss-Prot
Match: O22907 (DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 4.0e-14
Identity = 94/376 (25.00%), Postives = 164/376 (43.62%), Query Frame = 0


Query: 205 SGKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSPYLLFLVPTQEKATQVR 264
           SG+D++    +G   T   +  ++    D    +  EG     P  +   PT+E A Q+ 
Sbjct: 264 SGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----PIGVICAPTRELAHQIF 323

Query: 265 SMCKPL-KALGVHTVSIHSGASLDHQIQGYLSFHSLKS-CEPEFLVSTPERLLELVAMQA 324
              K   KA G+   +++ G S   Q      F  LK+ C  E +V+TP RL++++ M+A
Sbjct: 324 LEAKKFSKAYGLRVSAVYGGMSKHEQ------FKELKAGC--EIVVATPGRLIDMLKMKA 383

Query: 325 IDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSFSCAYVPVVQDLLSG 384
           + +   S LV+D  D     G+   ++SI   I  +  T++FS +       + +++LS 
Sbjct: 384 LTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSD 443

Query: 385 PIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALDRANGRQLCPQPLKMLFILGK 444
           PI+       +A+    I Q +N   S+ EKL  +++ L              +L    K
Sbjct: 444 PIRVTVGEVGMANED--ITQVVNVIPSDAEKLPWLLEKLPGMIDEG------DVLVFASK 503

Query: 445 ECNVQELAAALKSKGHDIVA--GALRGVPEIKNNSEVDSRSRPVLAKIDMEQINTIDLGN 504
           +  V E+ A L      + A  G       ++   +  S    VL   D+     +D+ +
Sbjct: 504 KATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV-AARGLDIKS 563

Query: 505 YDSIFILYAFPSIDKYVQIL--TGMARHTVNGVLHTFITKEEASFAGSLVEILQECGQPV 564
             ++        +D +V  +  TG A    +GV +T +T+ EA FAG LV  L   GQ V
Sbjct: 564 LKTVVNYDIAKDMDMHVHRIGRTGRAGDR-DGVAYTLVTQREARFAGELVNSLVAAGQNV 616

Query: 565 PETVRNLSLTQATSQS 573
           P  + +L++     +S
Sbjct: 624 PPELTDLAMKDGRFKS 616

[Close]

BLAST of Carg02427 vs. ExPASy TrEMBL
Match: A0A6J1FKA1 (ATP-dependent RNA helicase DDX42 OS=Cucurbita moschata OX=3662 GN=LOC111444991 PE=4 SV=1)

HSP 1 Score: 1062.0 bits (2745), Expect = 8.8e-307
Identity = 556/572 (97.20%), Postives = 558/572 (97.55%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKV PSKGSKREFPKDKSS APNRTRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVTPSKGSKREFPKDKSSSAPNRTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNAN EGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANGEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300
           LSFSSPYLLFLVPTQEKAT VRSMCKPLKALGVHTVSIHSGASLDHQIQG      LKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATHVRSMCKPLKALGVHTVSIHSGASLDHQIQG------LKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEE KLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEGKLSKVIQALD 420

Query: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480
           RANG QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSR R
Sbjct: 421 RANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRWR 480

Query: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540
           PV+AKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS
Sbjct: 481 PVVAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540

Query: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           FAGSLVEIL+ECGQ VPETVRNLSLTQATSQS
Sbjct: 541 FAGSLVEILEECGQAVPETVRNLSLTQATSQS 566

[Close]

BLAST of Carg02427 vs. ExPASy TrEMBL
Match: A0A6J1JVP3 (ATP-dependent RNA helicase DDX42 OS=Cucurbita maxima OX=3661 GN=LOC111489296 PE=4 SV=1)

HSP 1 Score: 1040.0 bits (2688), Expect = 3.6e-300
Identity = 544/572 (95.10%), Postives = 553/572 (96.68%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP
Sbjct: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKD SS APN TRGDACREKVRSSKEGS
Sbjct: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDNSSSAPNGTRGDACREKVRSSKEGS 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
           GDATSGHIAKRSKTCPERTKVNANVEG VQDFQEEGFDSSISPSKFLILCLNAIEKALYH
Sbjct: 121 GDATSGHIAKRSKTCPERTKVNANVEGSVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180

Query: 181 DSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240
           DSFKGIN+PL ADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG
Sbjct: 181 DSFKGINEPLPADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKEG 240

Query: 241 LSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 300
           LSFSSPYLLFLVPTQEKATQ+RSMCKPLKALGVHTVSIHSGASLDHQIQG      LKSC
Sbjct: 241 LSFSSPYLLFLVPTQEKATQIRSMCKPLKALGVHTVSIHSGASLDHQIQG------LKSC 300

Query: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTI 360
           EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGG LEMIQSIRKSISSNL+T 
Sbjct: 301 EPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGSLEMIQSIRKSISSNLYTF 360

Query: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALD 420
           VFSDSFSCAYVPVVQDLLSGPIQRLSLN SVASRSACIIQSINF TSEEEKLSKVIQALD
Sbjct: 361 VFSDSFSCAYVPVVQDLLSGPIQRLSLNTSVASRSACIIQSINFFTSEEEKLSKVIQALD 420

Query: 421 RANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRSR 480
           RANG QLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGAL GVPE+KNNSEVDSRSR
Sbjct: 421 RANGSQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALCGVPELKNNSEVDSRSR 480

Query: 481 PVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEAS 540
           PV+AKID+EQINTIDLGNYDSIFILYAFP IDKYVQILTGMARHTVNGVLH+FITKEEAS
Sbjct: 481 PVVAKIDIEQINTIDLGNYDSIFILYAFPPIDKYVQILTGMARHTVNGVLHSFITKEEAS 540

Query: 541 FAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           FAGSLVEIL+ECGQ VPETVRNLSLT+ATSQS
Sbjct: 541 FAGSLVEILEECGQAVPETVRNLSLTKATSQS 566

[Close]

BLAST of Carg02427 vs. ExPASy TrEMBL
Match: A0A0A0LQJ4 (DEAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G386150 PE=4 SV=1)

HSP 1 Score: 875.5 bits (2261), Expect = 1.2e-250
Identity = 465/573 (81.15%), Postives = 501/573 (87.43%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDAL RKRNKASRKKLRSK+GDSS+VSARVA+IIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKASRKKLRSKSGDSSAVSARVASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           T DDPYNDRNG     KK+TKV+PSK SKREFPK+KS+ APN T  D C E  RSSKEGS
Sbjct: 61  TPDDPYNDRNG-----KKDTKVKPSKSSKREFPKEKSTSAPNGTLRDVCFENARSSKEGS 120

Query: 121 GDA-TSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALY 180
           G    SG +AKRSKT PERTK   N +G VQ FQEE  +SS++PSKFLILCL+AIE ALY
Sbjct: 121 GGTLPSGRVAKRSKTDPERTKEYGNAKGSVQGFQEEDSESSVAPSKFLILCLSAIENALY 180

Query: 181 HDSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240
           HDS K INKPL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE
Sbjct: 181 HDSIKSINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240

Query: 241 GLSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKS 300
           G SFSSP+LLFLVP QEKATQ+RSMCKPLKALGVHTVSIH GASL HQIQG      LKS
Sbjct: 241 GSSFSSPFLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQG------LKS 300

Query: 301 CEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHT 360
           CEPEFLVSTPERLLELVAMQAIDI+GVSLLVVDGL+S S+GGYL+M QSIRKSISS LHT
Sbjct: 301 CEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSRGGYLDMTQSIRKSISSKLHT 360

Query: 361 IVFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQAL 420
           IVFSDSFSCAYVP +Q LL GPI+RLSLN SVA +SACIIQSINF TSE+EKLSKVIQAL
Sbjct: 361 IVFSDSFSCAYVPFIQSLLGGPIRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQAL 420

Query: 421 DRANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRS 480
           DRANG Q+ PQPLKMLFILGKECNV +LAAALK KGHDIVAGAL GVPEIKNN +VD + 
Sbjct: 421 DRANGSQIRPQPLKMLFILGKECNVHDLAAALKFKGHDIVAGALCGVPEIKNNLKVDGKL 480

Query: 481 RPVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEA 540
           RPV+AK D+EQINTIDLG Y+SIFIL AFP IDKYV+ILTGMARHT NGVLH+FI+KEEA
Sbjct: 481 RPVVAKTDIEQINTIDLGTYESIFILSAFPPIDKYVEILTGMARHTNNGVLHSFISKEEA 540

Query: 541 SFAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           S AGSLVEIL++CGQ VP+TVRNLSLTQATS S
Sbjct: 541 SVAGSLVEILEQCGQDVPKTVRNLSLTQATSHS 562

[Close]

BLAST of Carg02427 vs. ExPASy TrEMBL
Match: A0A5D3CIJ6 (Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00610 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 2.6e-250
Identity = 466/573 (81.33%), Postives = 502/573 (87.61%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDAL RKRNKA+RKKLRSK+GDSSSVSAR+A+IIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKAARKKLRSKSGDSSSVSARIASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           T DDPYNDRNG     KK+TKV+PSKGSKREFPK+KS+ APN T  D  RE  RSSKEGS
Sbjct: 61  TPDDPYNDRNG-----KKDTKVKPSKGSKREFPKEKSTSAPNGTLRDVGRENARSSKEGS 120

Query: 121 GDA-TSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALY 180
           G    SG +AKRSKT PERTK   N +G VQ FQEE  +SS++PSKFLILCLNAIE ALY
Sbjct: 121 GGTLPSGRLAKRSKTDPERTKEFGNAKGSVQGFQEEDSESSVAPSKFLILCLNAIENALY 180

Query: 181 HDSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240
           HDS K INKPL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK+KE
Sbjct: 181 HDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKDKE 240

Query: 241 GLSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKS 300
           G SFSSPYLLFLVP QEKATQ+RSMCKPLKALGVHTVSIH GASL HQIQG      LKS
Sbjct: 241 GSSFSSPYLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQG------LKS 300

Query: 301 CEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHT 360
           CEPEFLVSTPERLLELVAMQAIDI+GVSLLVVDGL+S SKGGYL+M QSIRKSISS LHT
Sbjct: 301 CEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSKGGYLDMTQSIRKSISSKLHT 360

Query: 361 IVFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQAL 420
           IVFSDSFS AYVPV+Q LL GP++RLSLN SVA +SACIIQSINF TSE+EKLSKVIQAL
Sbjct: 361 IVFSDSFSRAYVPVIQSLLGGPVRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQAL 420

Query: 421 DRANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRS 480
           DRANG  LCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGAL GVPEIKNNS+VD + 
Sbjct: 421 DRANGSPLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGKL 480

Query: 481 RPVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEA 540
           R V+AK  +EQI+TID+G Y+SIFIL AFP IDKYV+ILTGMARHTVNGVLH+FI+KEEA
Sbjct: 481 RYVVAKTHIEQISTIDIGIYESIFILSAFPPIDKYVEILTGMARHTVNGVLHSFISKEEA 540

Query: 541 SFAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           S AGSLVEIL++CGQ VP+TVRNLSLTQ TS S
Sbjct: 541 SVAGSLVEILEQCGQDVPKTVRNLSLTQGTSHS 562

[Close]

BLAST of Carg02427 vs. ExPASy TrEMBL
Match: A0A1S3C3J7 (pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo OX=3656 GN=LOC103496489 PE=4 SV=1)

HSP 1 Score: 874.4 bits (2258), Expect = 2.6e-250
Identity = 466/573 (81.33%), Postives = 502/573 (87.61%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDDAL RKRNKA+RKKLRSK+GDSSSVSAR+A+IIAAKKRR SGKRR CQGMCFSLP
Sbjct: 1   MAKGDDALTRKRNKAARKKLRSKSGDSSSVSARIASIIAAKKRRMSGKRRQCQGMCFSLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           T DDPYNDRNG     KK+TKV+PSKGSKREFPK+KS+ APN T  D  RE  RSSKEGS
Sbjct: 61  TPDDPYNDRNG-----KKDTKVKPSKGSKREFPKEKSTSAPNGTLRDVGRENARSSKEGS 120

Query: 121 GDA-TSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALY 180
           G    SG +AKRSKT PERTK   N +G VQ FQEE  +SS++PSKFLILCLNAIE ALY
Sbjct: 121 GGTLPSGRLAKRSKTDPERTKEFGNAKGSVQGFQEEDSESSVAPSKFLILCLNAIENALY 180

Query: 181 HDSFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEKE 240
           HDS K INKPL AD WGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARK+KE
Sbjct: 181 HDSIKRINKPLFADTWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKDKE 240

Query: 241 GLSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKS 300
           G SFSSPYLLFLVP QEKATQ+RSMCKPLKALGVHTVSIH GASL HQIQG      LKS
Sbjct: 241 GSSFSSPYLLFLVPNQEKATQIRSMCKPLKALGVHTVSIHPGASLGHQIQG------LKS 300

Query: 301 CEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHT 360
           CEPEFLVSTPERLLELVAMQAIDI+GVSLLVVDGL+S SKGGYL+M QSIRKSISS LHT
Sbjct: 301 CEPEFLVSTPERLLELVAMQAIDISGVSLLVVDGLESLSKGGYLDMTQSIRKSISSKLHT 360

Query: 361 IVFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQAL 420
           IVFSDSFS AYVPV+Q LL GP++RLSLN SVA +SACIIQSINF TSE+EKLSKVIQAL
Sbjct: 361 IVFSDSFSRAYVPVIQSLLGGPVRRLSLNTSVACQSACIIQSINFYTSEKEKLSKVIQAL 420

Query: 421 DRANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNNSEVDSRS 480
           DRANG  LCPQPLKMLFILGKECNV ELAAALKSKGHDIVAGAL GVPEIKNNS+VD + 
Sbjct: 421 DRANGSPLCPQPLKMLFILGKECNVHELAAALKSKGHDIVAGALCGVPEIKNNSKVDGKL 480

Query: 481 RPVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHTFITKEEA 540
           R V+AK  +EQI+TID+G Y+SIFIL AFP IDKYV+ILTGMARHTVNGVLH+FI+KEEA
Sbjct: 481 RYVVAKTHIEQISTIDIGIYESIFILSAFPPIDKYVEILTGMARHTVNGVLHSFISKEEA 540

Query: 541 SFAGSLVEILQECGQPVPETVRNLSLTQATSQS 573
           S AGSLVEIL++CGQ VP+TVRNLSLTQ TS S
Sbjct: 541 SVAGSLVEILEQCGQDVPKTVRNLSLTQGTSHS 562

[Close]

BLAST of Carg02427 vs. TAIR 10
Match: AT2G28600.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 440.3 bits (1131), Expect = 2.4e-123
Identity = 257/578 (44.46%), Postives = 364/578 (62.98%), Query Frame = 0


Query: 1   MAKGDDALARKRNKASRKKLRSKNGDSSSVSARVAAIIAAKKRRKSGKRRNCQGMCFSLP 60
           MAKGDD + RK+NK +RKK+  KN D+++VSAR+AAIIAAKKRRKSGKR  CQGMCF+LP
Sbjct: 1   MAKGDDNVQRKKNKVTRKKMSRKN-DTATVSARIAAIIAAKKRRKSGKRSMCQGMCFTLP 60

Query: 61  TLDDPYNDRNGNKDLDKKETKVRPSKGSKREFPKDKSSLAPNRTRGDACREKVRSSKEGS 120
           TL+DP+N+R G  D+ KK+ K                            ++KV+S ++  
Sbjct: 61  TLEDPFNERQGKADITKKKKK----------------------------KKKVKSRED-- 120

Query: 121 GDATSGHIAKRSKTCPERTKVNANVEGGVQDFQEEGFDSSISPSKFLILCLNAIEKALYH 180
                       K  P                  EG +    P KFL+L LN IE +   
Sbjct: 121 -----------KKPSP---------------MSIEGVEKMDGPPKFLMLNLNEIESSFRK 180

Query: 181 D--SFKGINKPLSADAWGIEFWKCYSSGKDILDTSGLSSTDEKIAWVVSSAADSIARKEK 240
           D    +  +K L   +WGIEFWKCYSSG DILDTSG+SST E+IAW+VS+AAD+IAR+EK
Sbjct: 181 DITYSEQHDKSLFTSSWGIEFWKCYSSGNDILDTSGMSSTVEQIAWIVSTAADAIARREK 240

Query: 241 ------EGLSFSSPYLLFLVPTQEKATQVRSMCKPLKALGVHTVSIHSGASLDHQIQGYL 300
                 E L  +SP+LL+LVP+Q KA+QVRS+CK LK +G+HTVS+H GA LDHQI G  
Sbjct: 241 DEVEEEEELLGNSPFLLYLVPSQSKASQVRSVCKALKGIGIHTVSLHQGAPLDHQISG-- 300

Query: 301 SFHSLKSCEPEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKS 360
               LKS EPEF+V+TPERLLE+V ++ +DI+ VSLLV+D L S   GGYL  ++SI+++
Sbjct: 301 ----LKSVEPEFIVATPERLLEIVTLKGVDISNVSLLVIDELGSLCSGGYLNAVKSIKQA 360

Query: 361 ISSNLHTIVFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKL 420
           ISS   TIVF++SFS + +P VQ  L G + R+++N SVAS+ +CI Q+++ C SEE+KL
Sbjct: 361 ISSKHQTIVFNNSFSASIIPAVQSFLGGSVNRVTVNESVASQGSCITQTVSVCASEEKKL 420

Query: 421 SKVIQALDRANGRQLCPQPLKMLFILGKECNVQELAAALKSKGHDIVAGALRGVPEIKNN 480
            K  + LD ++         K+++I+ KE + +++ A LK KG  +   +   + E+K +
Sbjct: 421 QKFAKHLDSSSS--------KLIYIVTKEESFKKIMAILKLKGISVSTSSDSKLSEVKKS 480

Query: 481 SEVDSRSRPVLAKIDMEQINTIDLGNYDSIFILYAFPSIDKYVQILTGMARHTVNGVLHT 540
                  +PV   ID EQ++T  + + +++ +   FPSI+ Y QILT MAR + +GVLH+
Sbjct: 481 ------RKPVAHLIDFEQLDTTVMRDSETVLLPDFFPSIEIYTQILTSMARESAHGVLHS 501

Query: 541 FITKEEASF--AGSLVEILQECGQPVPETVRNLSLTQA 569
           +IT+++A+   AG LV +L+ CGQ VP+  RN+ +  +
Sbjct: 541 YITEKDAASYQAGPLVNVLENCGQNVPDRWRNMDVAMS 501

[Close]

BLAST of Carg02427 vs. TAIR 10
Match: AT2G47330.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 2.9e-15
Identity = 94/376 (25.00%), Postives = 164/376 (43.62%), Query Frame = 0


Query: 205 SGKDILD--TSGLSSTDEKIAWVVSSAADSIARKEKEGLSFSSPYLLFLVPTQEKATQVR 264
           SG+D++    +G   T   +  ++    D    +  EG     P  +   PT+E A Q+ 
Sbjct: 264 SGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEG-----PIGVICAPTRELAHQIF 323

Query: 265 SMCKPL-KALGVHTVSIHSGASLDHQIQGYLSFHSLKS-CEPEFLVSTPERLLELVAMQA 324
              K   KA G+   +++ G S   Q      F  LK+ C  E +V+TP RL++++ M+A
Sbjct: 324 LEAKKFSKAYGLRVSAVYGGMSKHEQ------FKELKAGC--EIVVATPGRLIDMLKMKA 383

Query: 325 IDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSFSCAYVPVVQDLLSG 384
           + +   S LV+D  D     G+   ++SI   I  +  T++FS +       + +++LS 
Sbjct: 384 LTMMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSD 443

Query: 385 PIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALDRANGRQLCPQPLKMLFILGK 444
           PI+       +A+    I Q +N   S+ EKL  +++ L              +L    K
Sbjct: 444 PIRVTVGEVGMANED--ITQVVNVIPSDAEKLPWLLEKLPGMIDEG------DVLVFASK 503

Query: 445 ECNVQELAAALKSKGHDIVA--GALRGVPEIKNNSEVDSRSRPVLAKIDMEQINTIDLGN 504
           +  V E+ A L      + A  G       ++   +  S    VL   D+     +D+ +
Sbjct: 504 KATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDV-AARGLDIKS 563

Query: 505 YDSIFILYAFPSIDKYVQIL--TGMARHTVNGVLHTFITKEEASFAGSLVEILQECGQPV 564
             ++        +D +V  +  TG A    +GV +T +T+ EA FAG LV  L   GQ V
Sbjct: 564 LKTVVNYDIAKDMDMHVHRIGRTGRAGDR-DGVAYTLVTQREARFAGELVNSLVAAGQNV 616

Query: 565 PETVRNLSLTQATSQS 573
           P  + +L++     +S
Sbjct: 624 PPELTDLAMKDGRFKS 616

[Close]

BLAST of Carg02427 vs. TAIR 10
Match: AT5G63120.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 77.0 bits (188), Expect = 5.4e-14
Identity = 100/436 (22.94%), Postives = 185/436 (42.43%), Query Frame = 0


Query: 138 RTKVNANVEG-----GVQDFQEEGFDSSISPSKFLILCLNAIEKALYHDSFKGINKPLSA 197
           RT+ + +VEG      ++ FQ+  F  +I         L AI K        G  +P   
Sbjct: 148 RTERDISVEGRDVPKPMKMFQDANFPDNI---------LEAIAKL-------GFTEPTPI 207

Query: 198 DAWGIEFWKCYSSGKDILDTSGLSSTDE-KIAWVVSSAADSIARKEKEGLSFSSPYLLFL 257
            A G   W     G+D++   G++ T   K    +  A   ++ + + G     P +L L
Sbjct: 208 QAQG---WPMALKGRDLI---GIAETGSGKTLAYLLPALVHVSAQPRLGQD-DGPIVLIL 267

Query: 258 VPTQEKATQVRSMCKPL-KALGVHTVSIHSGASLDHQIQGYLSFHSLKSCEPEFLVSTPE 317
            PT+E A Q++   +      GV +  I+ GA    QI+             E +++TP 
Sbjct: 268 APTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLRR-------GVEIVIATPG 327

Query: 318 RLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVFSDSFSCAY 377
           RL++++  Q  ++  V+ LV+D  D     G+   I+ I   I  +  T+++S ++    
Sbjct: 328 RLIDMLECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLLWSATWPREV 387

Query: 378 VPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALDRANGRQLCPQ 437
             + +  L  P + +  +  + +  +  I  +       EK ++++  L     +QL   
Sbjct: 388 ETLARQFLRDPYKAIIGSTDLKANQS--INQVIEIVPTPEKYNRLLTLL-----KQLMDG 447

Query: 438 PLKMLFILGKECNVQELAAALKSKGHDIVA--GALRGVPEIKNNSEVDSRSRPVLAKIDM 497
              ++F+  K     ++   L+  G   +A  G        +  +E  S   P++   D+
Sbjct: 448 SKILIFVETKR-GCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDV 507

Query: 498 EQINTIDLGNYDSIFILYAFP-SIDKYVQILTGMARHTVNGVLHTFITKEEASFAGSLVE 557
                +D+ +   + + Y FP +++ Y+  +    R    G+  TF T + A FA  LV+
Sbjct: 508 -AARGLDVKDIKCV-VNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARELVK 543

Query: 558 ILQECGQPVPETVRNL 564
           ILQE GQ VP T+  L
Sbjct: 568 ILQEAGQVVPPTLSAL 543

[Close]

BLAST of Carg02427 vs. TAIR 10
Match: AT3G06480.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 73.9 bits (180), Expect = 4.6e-13
Identity = 82/338 (24.26%), Postives = 149/338 (44.08%), Query Frame = 0


Query: 242 SFSSPYLLFLVPTQEKATQVRSMCKPL-KALGVHTVSIHSGASLDHQIQGYLSFHSLKSC 301
           S + P +L L PT+E ATQ++       ++  +    ++ GA    Q         LK  
Sbjct: 504 SRNGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPKGPQ---------LKEL 563

Query: 302 E--PEFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLH 361
           E   + +V+TP RL +++ M+ ID   VSLLV+D  D     G+   I+ I   I     
Sbjct: 564 ERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEADRMLDMGFEPQIRKIVNEIPPRRQ 623

Query: 362 TIVFSDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFC--TSEEEKLSKVI 421
           T++++ ++      +  DLL  P+Q         + +  I Q +       +E +L +++
Sbjct: 624 TLMYTATWPKEVRKIASDLLVNPVQVNIGRVDELAANKAITQYVEVVPQMEKERRLEQIL 683

Query: 422 QALDRANGRQLCPQPLKMLFILGKECNVQELAAAL-KSKGHDIVAGALRGVPEIKNNSEV 481
           ++ +R +         K++      C+ + L   L +S G    A  + G    K   E 
Sbjct: 684 RSQERGS---------KVIIF----CSTKRLCDHLARSVGRHFGAVVIHG---DKTQGER 743

Query: 482 D-------SRSRPVLAKIDMEQINTIDLGNYDSIFILYAFPS-IDKYVQILTGMARHTVN 541
           D       S    VL   D+     +D+ +   + I Y FP+ ++ YV  +    R    
Sbjct: 744 DWVLNQFRSGKSCVLIATDV-AARGLDIKDI-RVVINYDFPTGVEDYVHRIGRTGRAGAT 803

Query: 542 GVLHTFITKEEASFAGSLVEILQECGQPVPETVRNLSL 566
           GV  TF T+++  +A  L+++L+   Q VP  VR++++
Sbjct: 804 GVAFTFFTEQDWKYAPDLIKVLEGANQQVPPQVRDIAM 814

[Close]

BLAST of Carg02427 vs. TAIR 10
Match: AT5G14610.1 (DEAD box RNA helicase family protein )

HSP 1 Score: 69.3 bits (168), Expect = 1.1e-11
Identity = 82/328 (25.00%), Postives = 145/328 (44.21%), Query Frame = 0


Query: 246 PYLLFLVPTQEKATQVR-SMCKPLKALGVHTVSIHSGASLDHQIQGYLSFHSLKSCE--P 305
           P +L L PT+E ATQ++    K  K+  +    ++ GA    Q         LK  E   
Sbjct: 302 PTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPKGPQ---------LKEIERGV 361

Query: 306 EFLVSTPERLLELVAMQAIDIAGVSLLVVDGLDSFSKGGYLEMIQSIRKSISSNLHTIVF 365
           + +V+TP RL +++ M+ I +  VS LV+D  D     G+   I+ I   + +   T+++
Sbjct: 362 DIVVATPGRLNDILEMKRISLHQVSYLVLDEADRMLDMGFEPQIRKIVNEVPTKRQTLMY 421

Query: 366 SDSFSCAYVPVVQDLLSGPIQRLSLNASVASRSACIIQSINFCTSEEEKLSKVIQALDRA 425
           + ++      +  DLL  P Q    N      +  I Q+I    +  EK S++ Q L   
Sbjct: 422 TATWPKEVRKIAADLLVNPAQVNIGNVDELVANKSITQTIE-VLAPMEKHSRLEQIL--- 481

Query: 426 NGRQLCPQPLKMLFILGKECNVQELAAAL-KSKGHDIVAGALRGVPEIKNNSEVDSRSR- 485
             R   P    ++F     C+ + +   L ++      A A+ G        +V ++ R 
Sbjct: 482 --RSQEPGSKIIIF-----CSTKRMCDQLARNLTRTFGAAAIHGDKSQAERDDVLNQFRS 541

Query: 486 ---PVLAKIDMEQINTIDLGNYDSIFILYAFPS-IDKYVQILTGMARHTVNGVLHTFITK 545
              PVL   D+     +D+ +   + + Y FP+ ++ YV  +    R    G+ +TF   
Sbjct: 542 GRTPVLVATDV-AARGLDVKDI-RVVVNYDFPNGVEDYVHRIGRTGRAGATGLAYTFFGD 601

Query: 546 EEASFAGSLVEILQECGQPVPETVRNLS 565
           ++A  A  L++IL+   Q VP  VR ++
Sbjct: 602 QDAKHASDLIKILEGANQKVPPQVREMA 607

The following BLAST results are available for this feature:

BLAST of Carg02427 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016310.1	0.0e+00	100.00	ATP-dependent RNA helicase DDX42 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578780.1	0.0e+00	99.30	ATP-dependent RNA helicase DDX42, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022938928.1	1.8e-306	97.20	ATP-dependent RNA helicase DDX42 [Cucurbita moschata]	[more]
XP_023550872.1	4.4e-300	95.76	ATP-dependent RNA helicase DDX42 [Cucurbita pepo subsp. pepo]	[more]
XP_022993206.1	7.4e-300	95.10	ATP-dependent RNA helicase DDX42 [Cucurbita maxima]	[more]

BLAST of Carg02427 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6CT46	1.1e-14	22.61	ATP-dependent RNA helicase DBP3 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS ...	[more]
Q10MH8	1.4e-14	24.11	DEAD-box ATP-dependent RNA helicase 24 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q5VQL1	2.4e-14	23.21	DEAD-box ATP-dependent RNA helicase 14 OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
Q755A5	4.0e-14	23.58	ATP-dependent RNA helicase DBP3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109....	[more]
O22907	4.0e-14	25.00	DEAD-box ATP-dependent RNA helicase 24 OS=Arabidopsis thaliana OX=3702 GN=RH24 P...	[more]

BLAST of Carg02427 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FKA1	8.8e-307	97.20	ATP-dependent RNA helicase DDX42 OS=Cucurbita moschata OX=3662 GN=LOC111444991 P...	[more]
A0A6J1JVP3	3.6e-300	95.10	ATP-dependent RNA helicase DDX42 OS=Cucurbita maxima OX=3661 GN=LOC111489296 PE=...	[more]
A0A0A0LQJ4	1.2e-250	81.15	DEAD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G386150 PE=4 S...	[more]
A0A5D3CIJ6	2.6e-250	81.33	Pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3C3J7	2.6e-250	81.33	pre-mRNA-processing ATP-dependent RNA helicase prp5 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Carg02427 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28600.1	2.4e-123	44.46	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT2G47330.1	2.9e-15	25.00	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT5G63120.2	5.4e-14	22.94	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]
AT3G06480.1	4.6e-13	24.26	DEAD box RNA helicase family protein	[more]
AT5G14610.1	1.1e-11	25.00	DEAD box RNA helicase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 81..363 e-value: 2.8E-11 score: 43.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 237..389 e-value: 6.7E-19 score: 70.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 242..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..118
None	No IPR available	PANTHER	PTHR47958	ATP-DEPENDENT RNA HELICASE DBP3	coord: 1..563
None	No IPR available	PANTHER	PTHR47958:SF8	ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1	coord: 1..563

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02427-RA	Carg02427-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071013	catalytic step 2 spliceosome
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0015276	ligand-gated ion channel activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0038023	signaling receptor activity
molecular_function	GO:0003676	nucleic acid binding