Carg02423 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02423
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	RING-H2 finger protein ATL8-like
Location	Carg_Chr15: 2307405 .. 2310848 (+)
RNA-Seq Expression	Carg02423
Synteny	Carg02423

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGGTGAGCATGTTTTTTTCTTGTTTAATTCGCTTCCAGATTTGATGTGGATATATCTATTTTGATTTTGTTCTAGTTAGTTGATTTTTGTTCTTGTTGGTCGCTAATTTCCCTTGGAACTCGTCTCCCTTTTTGTTACTCTTTCTAGGCTTAATTTCTGTATGCTAATTCATATGCCATAGATTTATCACTGGAAACTGGATATGATTGCCTCTCTGCATTGTAGTTAAAGTTCCATCACTTCAATACTTGCTTTTCTCCCATTTTCATGTAGTTTCAGGATTCATTTCATGCTGTGGTTTTACTTTGTTTCGATTTCGCCCCCTTTTTTCGCTCTCTTTTCGGTCTGCCGGGGCCTATTTCATGTATTTGGATATGGTGTTGTTCGGTTATCCATCTTACATAGTTCTGCTAATACATTTTTTGTGAAACCACGGATCTCCACAATGGTATGATGTTGTCCACTTTGAGCATAAGCTCTCTTACTTTTGCTTTTGGTTTCCCCCAAGAGGTCTCGTACGAGTGAAGATGTATTCCTGGTCATCCTCTTAATTAGCCTACATGGGACTACTCCTTTCAATAATCCTCAACAATTCTTCCCTCAAACAAAGTACACCATTTAGCATCTCTTGAGGTCTCTTATATGGAGCTCTCGAACAACCTCTCCTTAATCGAGGCTCGACTCCTTCTCTAGAGCCGTCGAACAAAGTACACTCTTTAGTCACTTTTTTATTTGATACTTGAGGATTTGATTGGCATGGCTAAGTTAAGGGCATGACTCTGATACCATGTTAGAAACCACGGACCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTAACTTTGCTTTTGGTTTCTCCAAAAGACCTCGTACTAACGAAGATGTATTCCTTACTTATAAACTCATGATCATCCTCTTAATTAGCCAACGTGGGTCTACTTCTCTCAGTAATTCTCAACAATTTCTTGATAGCCTCATTGTCGCTTTTAGTCGGGAGGTTATACAGAAACAAAAAGGGTCTCCGAAAAAACTCAATTCTTGTTTGTTCTCATAGGCAGTGGTTGTGCATTCATATTTCACAATTCACATTTCTACTCCTTTTTCTTTTTCATATGCTACTTTTAGACTTTGTTCAGGCTTTAGGTTGATTCGTTTATGGATATTTCTTTATTTACACGTCGAACTTCTTTGTTGCAGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCGTCTATGAGAAATTCTCAGTACGTGCCCCCTTCAATTCAGTCTCTCATTTCATTCGTTTTCATGATTTTTCAAGAAAATCCCTATCATTTTAATGTAAAGCTTAATGACTTTATCAATGAAAGGAGAGAGACATGTGACTGCATGCTTTACCTATGGGAAAATGATGAGCTTGCAATGAGTTGGTCTTGTAGTTGATTGGTTTTTCCCTAAGTTACTAGAAATCGTGACTTTTTTATGAGACGTTTTGATAAGTTGGCTTTAAACATAGTCCTAATCAGCCTGGGCCCTTAGCAATAGATGTCGATAGAGGCATTACTCGTTAAAATCTCGTATGGCTTGGAACAAACGATAACGTGTTATGGACATGATTCAATCATGCTCCATTAGTTTCACTCTACCTTGGAGCTTTCTGAAGATATTCTTATACAATATTGAGTTCTCTTAGCTTGAGTATACCTAAAGTGTTAAGAACTTAAAACCCCTTATGCAGATCTTCTTTGCTCCCTAGCTCTCATGAAACAACCTTTGCTTGCAATATTTTGAATTAACTCGAGCTCGAGTTCCCTATTCTGGTTGCATTATGTTTAAAGAAACAATACACGACCAAGGGAGAACTCGAACTCCCTATTCTTTCCATTACCAGAGATCCCAAATGATCAAAAGATGTCTGCTCCCCTCTTGTTAACAAACAACTGAACTAAATGAGCCCAACTCTTAAGTTCATTACAGAAGTCCTCTCCCACAACTCACAAATCAAGCCTTACTACGACTCCTTCAGCCCTTCTCCTTCCATACAATTCCACTCTAGGAGGAATATTGAATCTATTGAGCTAGGTTTCAAATGTATACCACACCATCTTGATCATCTATGTGATCCCAGACTGATTGGTTGTAATGGCCCAAGCCCATTGCTAGCAAATATTATCCTCTTTGGACTTTTTATTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGAAAGAGGTTTTCACACCCTTACAAAAAATGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTTACCTTAGTGATGTTAGAGAAGTGGCAGGTATCATGAAATGTATGCATGGCCGTGGATGCTTTTCAAGAATTCTTCTTATAAATGGGAGAAGTTTCTGTAGAATACCATTCCTGAATGTCTCTCTCTCGTAGACTCGTACTTAGATAACACAAATGGTTTCTGCTGTGCGTGATTTTGTTGTGATTCCTTAGCGGAAAAAAAGACGAGATGGTATTTTGATCCGAGGAAACAAGGTGGATTTCCGAATCTAGTCCAAAAAGTGATGATATTTAAGATTGTGATTACAATTCCTTTTGGTTTTATGTGATGCTACATTCACGTTTGTTTAGCAAATCATGGAAAAACACAACACAGCCAAATTAGATTCTGTTTTGAATGGCAGATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACAAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAACAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAAGCCCTTGAGAACACGTCCTCGTTCATCATCAAAGGTAACCAGAATAGTAAAAATATAGAAAGCCCATCAAATGCTTGAACTTCCCTTAACTATGTGCTTAGAAAGATTGTGTGTCCTGTTGTTTACCACTGTGTATAAGCGCTGTTTGTAGTGAATTATTAGCTCATCTCTCTCTCTCTCTCTCTCTCTTATATTTGAACCAATGCATGCTGAGAAGAGGCTTTTAAGTGTTCAGC

mRNA sequence

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCGTCTATGAGAAATTCTCAATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACAAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAACAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAAGCCCTTGAGAACACGTCCTCGTTCATCATCAAAGGTAACCAGAATAGTAAAAATATAGAAAGCCCATCAAATGCTTGAACTTCCCTTAACTATGTGCTTAGAAAGATTGTGTGTCCTGTTGTTTACCACTGTGTATAAGCGCTGTTTGTAGTGAATTATTAGCTCATCTCTCTCTCTCTCTCTCTCTCTTATATTTGAACCAATGCATGCTGAGAAGAGGCTTTTAAGTGTTCAGC

Coding sequence (CDS)

ATGATGTCTTCTGGAATAAACTTGGTGATGACTGTGATTGGATTCACTGTGAGCACTTTGTTCATCGTGTTCGTCTGCACAAGGCTTGTTTGTGCTCGGATTCATCTCAATGCTTCAAGGCGCTCCTTCCCAATCGCTTCTAGATCCGATCTCAGTGGGCTGGAACGGGGATTACACGGTCTAGAGCCTTTGGTTGTAGCCAACTTTCCAACTAAGAAGTACAGTGATGAATACTTCTCGTCTATGAGAAATTCTCAATGCACAGTTTGCTTGGCAGACTATCATAGTGAAGACTTATTGCGCATTCTTCCCTACTGTGGACACTCCTTCCATGTGAACTGCATAGACATATGGCTGCATCAGAACCTAACATGCCCGGTTTGTCGTATATCGTTACGTGACGTCCCAGACAAGAAACGAACGATGCAACCCTTGTTTAGTTCAGCAATTCGCTCCCATTACAACCTCAACTCAGATGCCTATGCTCATCCCTGCCACGAGTTCCCATTACAAGACCTCGAAAACAGTGGGTTGGATCAACCAATCCAACAAGAGAACCGCCGCTCACCTAGGACCAATGGAGCAGCAGAAGCCCTTGAGAACACGTCCTCGTTCATCATCAAAGGTAACCAGAATAGTAAAAATATAGAAAGCCCATCAAATGCTTGA

Protein sequence

MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQPIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA

Homology

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BLAST of Carg02423 vs. NCBI nr
Match: KAG7016306.1 (RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA
Sbjct: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 222

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BLAST of Carg02423 vs. NCBI nr
Match: XP_022939748.1 (putative RING-H2 finger protein ATL71 [Cucurbita moschata] >KAG6578776.1 RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKN+ESPSNA
Sbjct: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNVESPSNA 222

[Close]

BLAST of Carg02423 vs. NCBI nr
Match: XP_022993424.1 (putative RING-H2 finger protein ATL71 [Cucurbita maxima])

HSP 1 Score: 435.6 bits (1119), Expect = 2.5e-118
Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILP CGHSFHVNCIDIWLH
Sbjct: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPL+DLENSGLDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLRDLENSGLDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PI QENRRSPRTNGAAE LENTSSFI+KGNQNSKN+ESPSNA
Sbjct: 181 PI-QENRRSPRTNGAAEHLENTSSFIVKGNQNSKNVESPSNA 221

[Close]

BLAST of Carg02423 vs. NCBI nr
Match: XP_023551420.1 (putative RING-H2 finger protein ATL71 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.1 bits (1115), Expect = 7.2e-118
Identity = 216/222 (97.30%), Postives = 218/222 (98.20%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPL VANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEPLFVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFP  DLENS LDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFP-GDLENSELDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PIQQENRRSPRTNGAA+ALENTSSFIIKGNQNSKN+ESPSNA
Sbjct: 181 PIQQENRRSPRTNGAAQALENTSSFIIKGNQNSKNVESPSNA 221

[Close]

BLAST of Carg02423 vs. NCBI nr
Match: XP_008456580.1 (PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo] >TYK11748.1 RING-H2 finger protein ATL8-like [Cucumis melo var. makuwa])

HSP 1 Score: 356.3 bits (913), Expect = 1.9e-94
Identity = 184/227 (81.06%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKY+D+YFSSMRN+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIRS   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +P  NGA + +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTPGANGAVDPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

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BLAST of Carg02423 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.1e-15
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGLEPLVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQNLTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL Q+LTCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLRDVPDK 139
           CR  L +   K
Sbjct: 178 CRNCLVETCQK 186

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BLAST of Carg02423 vs. ExPASy Swiss-Prot
Match: O64762 (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.7e-14
Identity = 41/142 (28.87%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGLEPL 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQN 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  +
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 LTCPVCRISLRDVPDKKRTMQP 145
            TCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]

BLAST of Carg02423 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.5e-14
Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ ++QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKP 146

[Close]

BLAST of Carg02423 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.5e-14
Identity = 44/152 (28.95%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +   +++SQC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 86  GLSKDIREMLPVVI-------YKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHM 145

Query: 113 NCIDIWLHQNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLN-SDAYAHPCHEFPLQ 172
            CID+WL  + TCP+CR+SL  +P     +    +  + S  N N  +A   P  +   +
Sbjct: 146 ECIDLWLTSHTTCPLCRLSL--IPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATE 205

Query: 173 DLENSGLDQPIQQENRRSPRTNGAAEALENTS 204
            + ++     +++ NR S   +   E  +  S
Sbjct: 206 AISHT---DDVEEGNRDSQEVSKETEENDRNS 223

[Close]

BLAST of Carg02423 vs. ExPASy Swiss-Prot
Match: Q8RXX9 (E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 5.9e-14
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 60  GLEPLVVANFPTKKYSDEYFSSMRNS--QCTVCLADYHSEDLLRILPYCGHSFHVNCIDI 119
           GL+  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH +CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQNLTCPVCRISLRDVPDKKRTMQP 145
           WL  ++TCPVCR +L +   +  +++P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

[Close]

BLAST of Carg02423 vs. ExPASy TrEMBL
Match: A0A6J1FMG8 (putative RING-H2 finger protein ATL71 OS=Cucurbita moschata OX=3662 GN=LOC111445538 PE=4 SV=1)

HSP 1 Score: 449.5 bits (1155), Expect = 8.1e-123
Identity = 221/222 (99.55%), Postives = 222/222 (100.00%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKN+ESPSNA
Sbjct: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNVESPSNA 222

[Close]

BLAST of Carg02423 vs. ExPASy TrEMBL
Match: A0A6J1K062 (putative RING-H2 finger protein ATL71 OS=Cucurbita maxima OX=3661 GN=LOC111489441 PE=4 SV=1)

HSP 1 Score: 435.6 bits (1119), Expect = 1.2e-118
Identity = 216/222 (97.30%), Postives = 219/222 (98.65%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILP CGHSFHVNCIDIWLH
Sbjct: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPNCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPL+DLENSGLDQ
Sbjct: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLRDLENSGLDQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNSKNIESPSNA 223
           PI QENRRSPRTNGAAE LENTSSFI+KGNQNSKN+ESPSNA
Sbjct: 181 PI-QENRRSPRTNGAAEHLENTSSFIVKGNQNSKNVESPSNA 221

[Close]

BLAST of Carg02423 vs. ExPASy TrEMBL
Match: A0A5D3CKS4 (RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00660 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.3e-95
Identity = 184/227 (81.06%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKY+D+YFSSMRN+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIRS   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +P  NGA + +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTPGANGAVDPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Carg02423 vs. ExPASy TrEMBL
Match: A0A1S3C364 (RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 9.3e-95
Identity = 184/227 (81.06%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKY+D+YFSSMRN+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIRS   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRS---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +P  NGA + +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTPGANGAVDPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Carg02423 vs. ExPASy TrEMBL
Match: A0A0A0KB30 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 2.1e-94
Identity = 184/227 (81.06%), Postives = 202/227 (88.99%), Query Frame = 0


Query: 1   MMSSGINLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSG+NLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  LEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120
           +EP+VVANFPTKKYSD+YFSSM+N+QCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLNSDAYAHPCHEFPLQDLENSGLDQ 180
           Q+ TCPVCR+SLR+V DKKRTMQPLFSSAIR+   LNSD    PC  FPL+DLEN+GL+Q
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRA---LNSD----PCRGFPLRDLENNGLEQ 180

Query: 181 PIQQENRRSPRTNGAAEALENTSSFIIKGNQNS-----KNIESPSNA 223
           PI QEN  +  TNGAA+ +EN S F I+GNQNS     KN+ESPSNA
Sbjct: 181 PI-QENHYTTGTNGAADPIENASPF-IEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Carg02423 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.0 bits (201), Expect = 6.5e-16
Identity = 47/131 (35.88%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGLEPLVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQNLTCPV 136
            FP   YS E      + +C +CL+D+ S + LR+LP C H FHV CID WL Q+LTCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRISLRDVPDK 139
           CR  L +   K
Sbjct: 178 CRNCLVETCQK 186

[Close]

BLAST of Carg02423 vs. TAIR 10
Match: AT2G34990.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.9e-15
Identity = 41/142 (28.87%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGLEPL 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + GL+  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYSD--EYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLHQN 127
           ++ +FPT  YS+  E    +   +C VC+ ++   + LR++P C H FH +C+ +WL  +
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 LTCPVCRISLRDVPDKKRTMQP 145
            TCP+CR+ L   P ++  + P
Sbjct: 136 STCPLCRVDLCLQPGERSYLNP 153

[Close]

BLAST of Carg02423 vs. TAIR 10
Match: AT4G10160.1 (RING/U-box superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 2.5e-15
Identity = 33/84 (39.29%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ ++QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 NCIDIWLHQNLTCPVCRISLRDVP 137
            CID+WL  + TCP+CR+SL   P
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKP 146

[Close]

BLAST of Carg02423 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-15
Identity = 44/152 (28.95%), Postives = 80/152 (52.63%), Query Frame = 0


Query: 53  GLERGLHGLEPLVVANFPTKKYSDEYFSSMRNSQCTVCLADYHSEDLLRILPYCGHSFHV 112
           GL + +  + P+V+       Y + +   +++SQC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 86  GLSKDIREMLPVVI-------YKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHM 145

Query: 113 NCIDIWLHQNLTCPVCRISLRDVPDKKRTMQPLFSSAIRSHYNLN-SDAYAHPCHEFPLQ 172
            CID+WL  + TCP+CR+SL  +P     +    +  + S  N N  +A   P  +   +
Sbjct: 146 ECIDLWLTSHTTCPLCRLSL--IPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSATE 205

Query: 173 DLENSGLDQPIQQENRRSPRTNGAAEALENTS 204
            + ++     +++ NR S   +   E  +  S
Sbjct: 206 AISHT---DDVEEGNRDSQEVSKETEENDRNS 223

[Close]

BLAST of Carg02423 vs. TAIR 10
Match: AT3G05200.1 (RING/U-box superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.2e-15
Identity = 34/87 (39.08%), Postives = 52/87 (59.77%), Query Frame = 0


Query: 60  GLEPLVVANFPTKKYSDEYFSSMRNS--QCTVCLADYHSEDLLRILPYCGHSFHVNCIDI 119
           GL+  VV  FPT  YSD     +     +C +CL ++  ++ LR+LP C H FH +CID 
Sbjct: 99  GLDVSVVETFPTFLYSDVKTQKLGKGELECAICLNEFEDDETLRLLPKCDHVFHPHCIDA 158

Query: 120 WLHQNLTCPVCRISLRDVPDKKRTMQP 145
           WL  ++TCPVCR +L +   +  +++P
Sbjct: 159 WLEAHVTCPVCRANLAEQVAEGESVEP 185

The following BLAST results are available for this feature:

BLAST of Carg02423 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016306.1	1.3e-122	100.00	RING-H2 finger protein ATL7, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
XP_022939748.1	1.7e-122	99.55	putative RING-H2 finger protein ATL71 [Cucurbita moschata] >KAG6578776.1 RING-H2...	[more]
XP_022993424.1	2.5e-118	97.30	putative RING-H2 finger protein ATL71 [Cucurbita maxima]	[more]
XP_023551420.1	7.2e-118	97.30	putative RING-H2 finger protein ATL71 [Cucurbita pepo subsp. pepo]	[more]
XP_008456580.1	1.9e-94	81.06	PREDICTED: RING-H2 finger protein ATL8-like [Cucumis melo] >TYK11748.1 RING-H2 f...	[more]

BLAST of Carg02423 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C034	9.1e-15	35.88	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
O64762	2.7e-14	28.87	RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1	[more]
Q9SN27	3.5e-14	39.29	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]
Q9SN28	4.5e-14	28.95	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]
Q8RXX9	5.9e-14	39.08	E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana OX=3702 GN=ATL6 PE=1 SV...	[more]

BLAST of Carg02423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMG8	8.1e-123	99.55	putative RING-H2 finger protein ATL71 OS=Cucurbita moschata OX=3662 GN=LOC111445...	[more]
A0A6J1K062	1.2e-118	97.30	putative RING-H2 finger protein ATL71 OS=Cucurbita maxima OX=3661 GN=LOC11148944...	[more]
A0A5D3CKS4	9.3e-95	81.06	RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C364	9.3e-95	81.06	RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV...	[more]
A0A0A0KB30	2.1e-94	81.06	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 P...	[more]

BLAST of Carg02423 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49220.1	6.5e-16	35.88	RING/U-box superfamily protein	[more]
AT2G34990.1	1.9e-15	28.87	RING/U-box superfamily protein	[more]
AT4G10160.1	2.5e-15	39.29	RING/U-box superfamily protein	[more]
AT4G10150.1	3.2e-15	28.95	RING/U-box superfamily protein	[more]
AT3G05200.1	4.2e-15	39.08	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 87..128 e-value: 5.6E-7 score: 39.2
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 86..129 e-value: 3.5E-12 score: 46.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 87..129 score: 12.504031
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 64..138 e-value: 6.2E-20 score: 72.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..222
None	No IPR available	PANTHER	PTHR47035:SF3	OS11G0150450 PROTEIN	coord: 1..220
None	No IPR available	PANTHER	PTHR47035	OS11G0150450 PROTEIN	coord: 1..220
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 86..129 e-value: 1.20684E-16 score: 68.8677
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 86..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02423-RA	Carg02423-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane