Carg02421 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02421
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ras-related protein RABF1-like
Location	Carg_Chr15: 2296674 .. 2300211 (+)
RNA-Seq Expression	Carg02421
Synteny	Carg02421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGAACCAGTCGCGAAGGAGCAAGCTTCTTCTTCTCCTTCGCAGAATTCTCCAATTTCTGCGTAGACTCCACGAAAGTTCAATCGACAGAGAATTACTTGGGAGTGGTTGTTTTACATACCCTTGATCGCCATGGGCTCCTCCTCCTCTGTCCCTGGTATTTTCAATTCTCGAATTCCGTTGCTTCAGTTTTGTTAGGGTTATCAGATTGTTTATTCGCCTATTTAATTCTGATCGACGAGGGCGTATTGAGAATCTACGAGGTCGATTGTTTGGTCTGTTCTATGTTTTTGCTAATTATGGAGTTGTCTTGGTTCATTGATTTTCTTTAATGGCAGCATTAGGGTTTGGTTGGTTTTCTCTTACGTATCGGAGTTTAGGTCGAGTTTCATTGATATTTTGGCGGGATTTGTAATGCAGGCAGGGCTTCTGGAGGATCGGGGCGGCTTAATCCAAAGAACAGGGCAGCTGATTCCAAGAATTTGCGCGTCAAGGTATTTGATATGATGCAACCAAATTATTCACTTGTAGTTCTTGTCTTTTCAGTGTTAATGGAATACGGCCCCTTAAGTATGTTCTATGTCAGTCTGATAGCTGGGAATTTTGTTGATTTACAATTCTTTACTGTTGAAGACGAACATGAGGCCCCTTAAGTAAGTTGTATTGCGTCAAATATTGTGCTCGCTTAGAGAGCTTAAAAGTTTTTATGATCTTGTATTTTTTCATCTTCTCTTTCTGCCTTTATGCAGCTTGTCCTGTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCGACGTCTAAGGTCAGCACTATGTTACATTCTGTTAATTCTTAAAATCAATGTATGCTCAATACATGTAACATCCCAACCCCACCACTAGCAGATATTGTCCTCTTTGGGCTTTTCTTTCCGAGTTTTCTCTCAAGGTTTTAAAATGTGTATGTTAGAGAGAGGTTTCCACACCCTTATAAGGAATGTTTCGTTTCCCTCTCCAACAGATGTGGGATCTTACAATACAAATAAATTTACGTTTTTATCATTCCATTCGCAAAGGAATTACAATCGTTTGATTCGACATGTTTGTTGAGAAAACTCAGGTAACTGTTGGAGCATCGTTCTTGTCACAAACGATAGTTTTACAAGATTCCACGACAGTGAAATTTGAAATATGGGATACCGCTGGGCAAGAGAGGTAGGACGACTATCTTAATCTCTAGTTGATATCCTCAAACACATGTTTTTAACTTCTTAGAAAGTAATCATATTCTCATTGGTAGCCATTTTTAGCTTGCTTCATGTTCACAAGAGCTTTTTATTGCAAAAGGTTATCACTGTTGATTTGTCTTGATTTAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTGTTGTATATGATATAACAAACTCAGATTCATTCGCCAAAGCAAAATATTGGGTTAAGGTATGTTTTTAAAGTGATTATGTAGTTTTCGTACTATATTTACTAGCGACGATCTTCATTCATAGTCCTTATTCATGGCAGCTCCTCATTGGTTTAACATCCCACACACGGGTGATCCGATTTAAACGGAATTCTTTTTAATCTATGGGCAGATAATCAGATAATCACATTCTTCACTACCTATATGTCGTTCCATTGTACCTTCTCCTCATTTTCCAGTTTACATTTATGGTGTGTAGACTTTTCGCTTTTCCTTTGATGATCGTCATTCTTCTGACTCGTGCTTTTCGTTTCACTTTGTTTCTTTATAATTTTTGTGTTGTTTCCTGCCCCAAGGAAGGAAAAAACAAAAAAAAAAGAAAAAAGGAGACAAGATGATCTTTTATTTATTCCTTTTTCGGGTTTCAAATCAATCAATGTTGATCACGTTAACAAAGATTCGTCCTATTTTTAATATATCAACAAAGATTATTGTGTCCCTTTTGATTTGGTTATCCTTTGAGCTTTGACTAATTCACAATCTTCACAATTCATACTGGGCACCACTCACAGGAGCTACAGAAGCATGGCCGCTCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGGAAAGGAAAGTATCAGTTCAGGTAAGTTCAATGTTATTCAATCAAATGCATCCTTCTTCTCCTGTCTTCTTTTTTTGGTCTATTTTGTTTCTTTTTCAGAACGGGGAAAGAAACTTTAACTCACTAATGCGAGATACTTATGTTTTCACTTTTGAAGGATGGGACTGAGTATGCAGAGAAGAATGGATTGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGTACTCCTGATTTTATCCTTTTTGTATGAATTTCATAGCTGCTGTTCATAAACAAGGTAGATATTTGTGTGTAGTGATTTTTATGATATTCCAGAGCAGTATTTGAATATTGCTGTTGATGTTAGAAGTTCATTGTGAAGTTCATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAATCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGTGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAGGCCCAAAGAGGACAATATCTGCTAGCGGTGGGTCTGGGTCGTTACATTCGTAATCTTCTTAAGTCATTGTCATAGACAGTAAAACTTTAAAGCATTCATTAGAGTTGAGGAACTTTAGCAAATCAATTCTCTTTTAATGATAGTGTTGAACTCAAGAAGATGTGAAGTTGGGACGGTGTTTCACCCCAGCTTTTCATTGGTGGTTGTATCTATCAATTTGCCAGCTCCGTAAGAGTGATATCCCACGTCGGTTGGAGAAGAGAACGAAACATTTTTTATAAGGGTGTGAAAACCTCTCCCTAGCAAACCAAGTCCAAAGAGGACAATATCTACTAGTGGTGGGGCTTAGACTGTTACATTAAGGTTTCAAATCAAGTTGCATGTTGTCGAAACGTTCACCTTAGGTCTCTATTGGTCGTTCTATGTCTGAATGAGCAATGTTTGGATTGGATTGGATTGCTTTTTTTACCTCTAATTTGTCTGTGGTGCATGTTTTATTGAATGCCCATCACTCTAATTCATGCTTCGAAACAGCCATTAAAAGGAGTTGAAAATGGTCGACTTGTCTTCTGATATTAGTTAGTTTGCATATTTTATCCGAAATTGAAATCTTTGAGAAACACATTTCGAGGCTTGAAATATGCGAAGATGTTCGATAGTTGTCGGGTCGCGATCACTTTGCGAGACCCTGTCTCCTTTTTGCATAAAGTTTCTCTAAAAATGTATTGTACTCATCCCAAGAGGGGCATTTTAAGATCCATGGCTTTGTAGGTTCCACCAGATGTCTCGATTCGAATACCGTTTAGATCAACAATTTCTTCTCTATTTGATTTGGCAGGAGATTCTAAGCGATTGCTACGACCAACTTCCTCGTGATCTTGCTACGACATTAATGCTTTTGTCAGCAGCTTCATCTCCCAGGTGA

mRNA sequence

AACGAACCAGTCGCGAAGGAGCAAGCTTCTTCTTCTCCTTCGCAGAATTCTCCAATTTCTGCGTAGACTCCACGAAAGTTCAATCGACAGAGAATTACTTGGGAGTGGTTGTTTTACATACCCTTGATCGCCATGGGCTCCTCCTCCTCTGTCCCTGGCAGGGCTTCTGGAGGATCGGGGCGGCTTAATCCAAAGAACAGGGCAGCTGATTCCAAGAATTTGCGCGTCAAGCTTGTCCTGTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCGACGTCTAAGGTAACTGTTGGAGCATCGTTCTTGTCACAAACGATAGTTTTACAAGATTCCACGACAGTGAAATTTGAAATATGGGATACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTGTTGTATATGATATAACAAACTCAGATTCATTCGCCAAAGCAAAATATTGGGTTAAGGAGCTACAGAAGCATGGCCGCTCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGGAAAGGAAAGTATCAGTTCAGGATGGGACTGAGTATGCAGAGAAGAATGGATTGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAGATTCTAAGCGATTGCTACGACCAACTTCCTCGTGATCTTGCTACGACATTAATGCTTTTGTCAGCAGCTTCATCTCCCAGGTGA

Coding sequence (CDS)

ATGGGCTCCTCCTCCTCTGTCCCTGGCAGGGCTTCTGGAGGATCGGGGCGGCTTAATCCAAAGAACAGGGCAGCTGATTCCAAGAATTTGCGCGTCAAGCTTGTCCTGTTAGGTGATTCTGGTGTTGGTAAAAGCTGTATTGTTCTTCGCTTTGTCCGTGGTCAGTTTGATCCGACGTCTAAGGTAACTGTTGGAGCATCGTTCTTGTCACAAACGATAGTTTTACAAGATTCCACGACAGTGAAATTTGAAATATGGGATACCGCTGGGCAAGAGAGGTATGCTGCATTAGCTCCACTTTACTATCGAGGTGCTGCAGTTGCAGTTGTTGTATATGATATAACAAACTCAGATTCATTCGCCAAAGCAAAATATTGGGTTAAGGAGCTACAGAAGCATGGCCGCTCTGATATCATTTTGGCATTGGTCGGTAACAAAGCTGATCTTCAAGAGGAAAGGAAAGTATCAGTTCAGGATGGGACTGAGTATGCAGAGAAGAATGGATTGTTCTTTATTGAGACATCTGCAAAGACTGCAGATAATATAAACGAGCTGTTTGAGGAGATTCTAAGCGATTGCTACGACCAACTTCCTCGTGATCTTGCTACGACATTAATGCTTTTGTCAGCAGCTTCATCTCCCAGGTGA

Protein sequence

MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEILSDCYDQLPRDLATTLMLLSAASSPR

Homology

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BLAST of Carg02421 vs. NCBI nr
Match: KAG7016304.1 (Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.8 bits (1065), Expect = 4.4e-112
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
Sbjct: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
Sbjct: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR 216
           NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR
Sbjct: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR 215

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BLAST of Carg02421 vs. NCBI nr
Match: KAG6578775.1 (Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 414.8 bits (1065), Expect = 4.4e-112
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
Sbjct: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
Sbjct: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR 216
           NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR
Sbjct: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR 215

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BLAST of Carg02421 vs. NCBI nr
Match: XP_023550755.1 (ras-related protein RABF1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 213/215 (99.07%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MG+SSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGTSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
Sbjct: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
Sbjct: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR 216
           NINELFEEILSDCYDQLP DLATTLMLLSAASSPR
Sbjct: 181 NINELFEEILSDCYDQLPHDLATTLMLLSAASSPR 215

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BLAST of Carg02421 vs. NCBI nr
Match: XP_022939060.1 (ras-related protein RABF1-like [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
Sbjct: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
Sbjct: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR 216
           NINELFEEILSDCYDQLP DLATTLMLLSAASSPR
Sbjct: 181 NINELFEEILSDCYDQLPCDLATTLMLLSAASSPR 215

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BLAST of Carg02421 vs. NCBI nr
Match: XP_022992948.1 (ras-related protein RABF1-like [Cucurbita maxima])

HSP 1 Score: 410.2 bits (1053), Expect = 1.1e-110
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGSSSSVPGRASGGSGRLNPKNRAA SKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGSSSSVPGRASGGSGRLNPKNRAAGSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
Sbjct: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
Sbjct: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSP 215
           NINELFEEILSDCYDQLPRDLATTLMLLSAASSP
Sbjct: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSP 214

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BLAST of Carg02421 vs. ExPASy Swiss-Prot
Match: Q9CB01 (Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.6e-77
Identity = 152/191 (79.58%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MGSSSSVPGRASGG-SGRLNPKNRA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MG +SS+P R SG  SG  N +N   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSD 120
           TSKVTVGASFLSQTI LQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAV+VYDIT+ +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKT 180
           SF KA+YWVKELQKHG  DI++ALVGNKADL E+R+V  +DG E AEKNG+FFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFEEI 190
           ADNIN+LFEEI
Sbjct: 181 ADNINQLFEEI 191

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BLAST of Carg02421 vs. ExPASy Swiss-Prot
Match: Q58DS9 (Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53
Identity = 109/191 (57.07%), Postives = 137/191 (71.73%), Query Frame = 0


Query: 12  SGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +G  G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A+VVYDITN+D+FA+AK WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEILS 191
           +    +I++AL GNKADL  +R V  Q+   YAE N L F+ETSAKTA N+NE+F  I  
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYAEDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 192 DCYDQLPRDLA 203
                 P++ A
Sbjct: 182 KLPKNEPQNAA 191

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BLAST of Carg02421 vs. ExPASy Swiss-Prot
Match: P31583 (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.3e-53
Identity = 104/176 (59.09%), Postives = 137/176 (77.84%), Query Frame = 0


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIVLQDSTTVKF 83
           ++   NL  KLVLLGD G GKS +V+RFV+GQF    + T+GA+F S T+ + ++ TVKF
Sbjct: 3   SSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAV-NNATVKF 62

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQKHGRSDIILALV 143
           EIWDTAGQERY +LAP+YYRGAA A++VYDIT+SDSFA+AK WV+ELQK G  ++++AL 
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSSDSFARAKKWVQELQKQGNPNMVMALA 122

Query: 144 GNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEILSDCYDQLPR 200
           GNKADL++ RKV+ ++   YAE+NGLFF+ETSAKTA N+N +F EI      +LPR
Sbjct: 123 GNKADLEDRRKVTAEEARLYAEENGLFFMETSAKTAVNVNAIFYEIAK----RLPR 173

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BLAST of Carg02421 vs. ExPASy Swiss-Prot
Match: P51147 (Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.8e-53
Identity = 108/191 (56.54%), Postives = 137/191 (71.73%), Query Frame = 0


Query: 12  SGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +G  G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A+VVYDITN+D+FA+AK WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEILS 191
           +    +I++AL GNKADL  +R V  Q+   YA+ N L F+ETSAKTA N+NE+F  I  
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 192 DCYDQLPRDLA 203
                 P++ A
Sbjct: 182 KLPKNEPQNAA 191

[Close]

BLAST of Carg02421 vs. ExPASy Swiss-Prot
Match: P35278 (Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2)

HSP 1 Score: 209.9 bits (533), Expect = 2.8e-53
Identity = 108/191 (56.54%), Postives = 137/191 (71.73%), Query Frame = 0


Query: 12  SGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQ 71
           +G  G   P   AA +K  + KLVLLG+S VGKS +VLRFV+GQF    + T+GA+FL+Q
Sbjct: 2   AGRGGAARPNGPAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ 61

Query: 72  TIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQ 131
           T+ L D TTVKFEIWDTAGQERY +LAP+YYRGA  A+VVYDITN+D+FA+AK WVKELQ
Sbjct: 62  TVCL-DDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQ 121

Query: 132 KHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEILS 191
           +    +I++AL GNKADL  +R V  Q+   YA+ N L F+ETSAKTA N+NE+F  I  
Sbjct: 122 RQASPNIVIALAGNKADLASKRAVEFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK 181

Query: 192 DCYDQLPRDLA 203
                 P++ A
Sbjct: 182 KLPKNEPQNAA 191

[Close]

BLAST of Carg02421 vs. ExPASy TrEMBL
Match: A0A6J1FLK7 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111445072 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
Sbjct: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
Sbjct: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSPR 216
           NINELFEEILSDCYDQLP DLATTLMLLSAASSPR
Sbjct: 181 NINELFEEILSDCYDQLPCDLATTLMLLSAASSPR 215

[Close]

BLAST of Carg02421 vs. ExPASy TrEMBL
Match: A0A6J1K0R4 (ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111489127 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 5.2e-111
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MGSSSSVPGRASGGSGRLNPKNRAA SKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGSSSSVPGRASGGSGRLNPKNRAAGSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF
Sbjct: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD
Sbjct: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSP 215
           NINELFEEILSDCYDQLPRDLATTLMLLSAASSP
Sbjct: 181 NINELFEEILSDCYDQLPRDLATTLMLLSAASSP 214

[Close]

BLAST of Carg02421 vs. ExPASy TrEMBL
Match: A0A1S3C444 (ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 8.7e-90
Identity = 178/199 (89.45%), Postives = 185/199 (92.96%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MG SSSVP RASG SG LNP+N AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTI LQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDIT+SDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKA+YWVKELQKHG  DIILALVGNKADLQE+RKVSVQDGTEYAEKNG+FFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPR 200
           NINELFEEI      +LPR
Sbjct: 181 NINELFEEIAK----RLPR 195

[Close]

BLAST of Carg02421 vs. ExPASy TrEMBL
Match: A0A0A0KJ92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 177/199 (88.94%), Postives = 185/199 (92.96%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MG SSSVP RASG SG LNP+N AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGRSGGLNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTI LQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDIT+SDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKA+YWVKELQKHG  DIILALVGNKADLQE+RKV+VQDGTEYAEKNG+FFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVTVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPR 200
           NINELFEEI      +LPR
Sbjct: 181 NINELFEEIAK----RLPR 195

[Close]

BLAST of Carg02421 vs. ExPASy TrEMBL
Match: A0A6J1GY77 (ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.9e-89
Identity = 177/199 (88.94%), Postives = 185/199 (92.96%), Query Frame = 0


Query: 1   MGSSSSVPGRASGGSGRLNPKNRAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60
           MG SSSVP RASG SG +NP+N AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS
Sbjct: 1   MGCSSSVPDRASGPSGGVNPENSAADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTS 60

Query: 61  KVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSF 120
           KVTVGASFLSQTI LQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAV+VYDIT+SDSF
Sbjct: 61  KVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVIVYDITSSDSF 120

Query: 121 AKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTAD 180
           AKA+YWVKELQKHG  DIILALVGNKADLQE+RKVSVQDGTEYAEKNG+FFIETSAKTAD
Sbjct: 121 AKAQYWVKELQKHGSPDIILALVGNKADLQEKRKVSVQDGTEYAEKNGMFFIETSAKTAD 180

Query: 181 NINELFEEILSDCYDQLPR 200
           NINELFEEI      +LPR
Sbjct: 181 NINELFEEIAK----RLPR 195

[Close]

BLAST of Carg02421 vs. TAIR 10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 290.4 bits (742), Expect = 1.2e-78
Identity = 152/191 (79.58%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MGSSSSVPGRASGG-SGRLNPKNRA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MG +SS+P R SG  SG  N +N   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSD 120
           TSKVTVGASFLSQTI LQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAV+VYDIT+ +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKT 180
           SF KA+YWVKELQKHG  DI++ALVGNKADL E+R+V  +DG E AEKNG+FFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFEEI 190
           ADNIN+LFEEI
Sbjct: 181 ADNINQLFEEI 191

[Close]

BLAST of Carg02421 vs. TAIR 10
Match: AT3G54840.2 (Ras-related small GTP-binding family protein )

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-77
Identity = 150/189 (79.37%), Postives = 166/189 (87.83%), Query Frame = 0


Query: 1   MGSSSSVPGRASGG-SGRLNPKNRA-ADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDP 60
           MG +SS+P R SG  SG  N +N   AD+KNLRVKLVLLGDSGVGKSCIVLRFVRGQFD 
Sbjct: 1   MGCASSLPDRNSGTLSGLSNSENAVPADAKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDA 60

Query: 61  TSKVTVGASFLSQTIVLQDSTTVKFEIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSD 120
           TSKVTVGASFLSQTI LQDSTTVKFEIWDTAGQERY+ALAPLYYRGA VAV+VYDIT+ +
Sbjct: 61  TSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAGVAVIVYDITSPE 120

Query: 121 SFAKAKYWVKELQKHGRSDIILALVGNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKT 180
           SF KA+YWVKELQKHG  DI++ALVGNKADL E+R+V  +DG E AEKNG+FFIETSAKT
Sbjct: 121 SFKKAQYWVKELQKHGSPDIVMALVGNKADLHEKREVPTEDGMELAEKNGMFFIETSAKT 180

Query: 181 ADNINELFE 188
           ADNIN+LFE
Sbjct: 181 ADNINQLFE 189

[Close]

BLAST of Carg02421 vs. TAIR 10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 204.5 bits (519), Expect = 8.4e-53
Identity = 98/166 (59.04%), Postives = 130/166 (78.31%), Query Frame = 0


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIVLQDSTTVKF 83
           AA +K++  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+ + D+ TVKF
Sbjct: 3   AAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVKF 62

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQKHGRSDIILALV 143
           EIWDTAGQERY +LAP+YYRGAA A++V+D+TN  SF +AK WV+ELQ  G  ++++AL 
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQGNPNMVMALA 122

Query: 144 GNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEI 190
           GNK+DL + RKV+ +D   YA++NGLFF+ETSAKTA N+ E+F EI
Sbjct: 123 GNKSDLLDARKVTAEDAQTYAQENGLFFMETSAKTATNVKEIFYEI 167

[Close]

BLAST of Carg02421 vs. TAIR 10
Match: AT5G45130.1 (RAB homolog 1 )

HSP 1 Score: 201.4 bits (511), Expect = 7.1e-52
Identity = 100/176 (56.82%), Postives = 133/176 (75.57%), Query Frame = 0


Query: 24  AADSKNLRVKLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIVLQDSTTVKF 83
           ++ +KN+  KLVLLGD G GKS +VLRFV+ QF    + T+GA+F SQT+ + D+ TVKF
Sbjct: 3   SSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDA-TVKF 62

Query: 84  EIWDTAGQERYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQKHGRSDIILALV 143
           EIWDTAGQERY +LAP+YYRGAA A++V+DITN  SF +AK WV+ELQ  G  ++++AL 
Sbjct: 63  EIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALA 122

Query: 144 GNKADLQEERKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEILSDCYDQLPR 200
           GNKADL + RKVS ++   YA++N LFF+ETSAKTA N+ ++F EI      +LPR
Sbjct: 123 GNKADLLDARKVSAEEAEIYAQENSLFFMETSAKTATNVKDIFYEIAK----RLPR 173

[Close]

BLAST of Carg02421 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 162.9 bits (411), Expect = 2.8e-40
Identity = 81/162 (50.00%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 33  KLVLLGDSGVGKSCIVLRFVRGQFDPTSKVTVGASFLSQTIVLQDSTTVKFEIWDTAGQE 92
           K+VL+GDSGVGKS ++ RF R +F   SK T+G  F ++T+ + +  TVK +IWDTAGQE
Sbjct: 14  KVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQV-EGRTVKAQIWDTAGQE 73

Query: 93  RYAALAPLYYRGAAVAVVVYDITNSDSFAKAKYWVKELQKHGRSDIILALVGNKADLQEE 152
           RY A+   YYRGA  A++VYD+T   +F     W+KEL+ H  S+I++ L+GNK DL+  
Sbjct: 74  RYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHL 133

Query: 153 RKVSVQDGTEYAEKNGLFFIETSAKTADNINELFEEILSDCY 195
           R V+ +D   YAEK GL FIETSA  A N+ + F+ ILS+ Y
Sbjct: 134 RAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVY 174

The following BLAST results are available for this feature:

BLAST of Carg02421 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016304.1	4.4e-112	100.00	Ras-related protein RABF1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578775.1	4.4e-112	100.00	Ras-related protein RABF1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023550755.1	3.7e-111	99.07	ras-related protein RABF1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022939060.1	3.7e-111	99.53	ras-related protein RABF1-like [Cucurbita moschata]	[more]
XP_022992948.1	1.1e-110	99.53	ras-related protein RABF1-like [Cucurbita maxima]	[more]

BLAST of Carg02421 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CB01	1.6e-77	79.58	Ras-related protein RABF1 OS=Arabidopsis thaliana OX=3702 GN=RABF1 PE=1 SV=1	[more]
Q58DS9	1.3e-53	57.07	Ras-related protein Rab-5C OS=Bos taurus OX=9913 GN=RAB5C PE=2 SV=1	[more]
P31583	1.3e-53	59.09	Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1	[more]
P51147	2.8e-53	56.54	Ras-related protein Rab-5C OS=Canis lupus familiaris OX=9615 GN=RAB5C PE=2 SV=1	[more]
P35278	2.8e-53	56.54	Ras-related protein Rab-5C OS=Mus musculus OX=10090 GN=Rab5c PE=1 SV=2	[more]

BLAST of Carg02421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FLK7	1.8e-111	99.53	ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111445072 PE=...	[more]
A0A6J1K0R4	5.2e-111	99.53	ras-related protein RABF1-like OS=Cucurbita maxima OX=3661 GN=LOC111489127 PE=4 ...	[more]
A0A1S3C444	8.7e-90	89.45	ras-related protein RABF1 OS=Cucumis melo OX=3656 GN=LOC103496444 PE=4 SV=1	[more]
A0A0A0KJ92	1.9e-89	88.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G406530 PE=4 SV=1	[more]
A0A6J1GY77	1.9e-89	88.94	ras-related protein RABF1-like OS=Cucurbita moschata OX=3662 GN=LOC111457920 PE=...	[more]

BLAST of Carg02421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G54840.1	1.2e-78	79.58	Ras-related small GTP-binding family protein	[more]
AT3G54840.2	1.3e-77	79.37	Ras-related small GTP-binding family protein	[more]
AT4G19640.1	8.4e-53	59.04	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	7.1e-52	56.82	RAB homolog 1	[more]
AT1G09630.1	2.8e-40	50.00	RAB GTPase 11C	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 74..96 score: 48.19 coord: 136..149 score: 48.7 coord: 171..193 score: 37.59 coord: 32..53 score: 50.56 coord: 55..71 score: 27.15
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 37..215 e-value: 0.0022 score: -0.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 33..196 e-value: 3.3E-28 score: 109.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 32..196 e-value: 4.6E-79 score: 278.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 16..190
None	No IPR available	PANTHER	PTHR47978:SF10	RAB FAMILY GTPASE	coord: 16..190
None	No IPR available	PROSITE	PS51419	RAB	coord: 27..215 score: 32.619259
None	No IPR available	PROSITE	PS51420	RHO	coord: 25..194 score: 9.059103
None	No IPR available	CDD	cd01860	Rab5_related	coord: 31..189 e-value: 9.26021E-106 score: 299.467
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 34..192 e-value: 1.2E-11 score: 29.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 33..193 e-value: 2.9E-58 score: 196.1
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 25..206 score: 16.929886
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 32..189 e-value: 2.6E-29 score: 100.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 18..203 e-value: 1.2E-65 score: 222.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 28..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02421-RA	Carg02421-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding