Carg02353 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02353
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	CASP-like protein
Location	Carg_Chr15: 1946284 .. 1946723 (-)
RNA-Seq Expression	Carg02353
Synteny	Carg02353

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTACATATTATACACTAAATGATTCTTATAGGTACATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGGCGACAAGGTACATTCAAAACAAACATTCGGTGTCGTGTCGTGTCGTGTGTGAGTCAAATGATTCTTTAGCGTGCAACGATTTTGGTGCAGTTTTTGTCGTATCTTCTAGCAACAAGCACAGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAGGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGGCATATGCAACCTCAGCTCTTCTCTTATTTGCATTCTTTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTGCGTTCTCAAAAAGACCTTAA

mRNA sequence

ATGGGTACATATTATACACTAAATGATTCTTATAGGTACATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCGTATCTTCTAGCAACAAGCACAGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAGGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGGCATATGCAACCTCAGCTCTTCTCTTATTTGCATTCTTTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTGCGTTCTCAAAAAGACCTTAA

Coding sequence (CDS)

ATGGGTACATATTATACACTAAATGATTCTTATAGGTACATGCTTGCTACTATCATCGTCGGGGTTGTATTCAACCTCTTGCAGATCGCGTTCTCCCTCTTTAATATCGTTAAGAATCGAAACGGTACCATACTATTTGATTTCTTTGGCGACAAGTTTTTGTCGTATCTTCTAGCAACAAGCACAGCAGCTGGGTTTGGAGTTTCAGTGGATTTGCAAAGAACAAAGGACCCAGAGGATTTGTTTGGAACGTTCTTTGGTAAGGCATATGCAACCTCAGCTCTTCTCTTATTTGCATTCTTTTGTTCTGCCGCTGTCTCTATTCTCTCTTCCTTTGCGTTCTCAAAAAGACCTTAA

Protein sequence

MGTYYTLNDSYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP

Homology

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: KAG7016239.1 (CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MGTYYTLNDSYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLAT 60
           MGTYYTLNDSYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLAT
Sbjct: 1   MGTYYTLNDSYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLAT 60

Query: 61  STAAGFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           STAAGFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP
Sbjct: 61  STAAGFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 118

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_022939491.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 193.7 bits (491), Expect = 8.7e-46
Identity = 102/109 (93.58%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATIIV +VFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS
Sbjct: 48  TYRYVLATIIVEIVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQRTKDPEDLFGTFF KAYA SALLLFAFFCSAAVSILSSFA SKRP
Sbjct: 108 VDLQRTKDPEDLFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRP 156

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_022992767.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 174.5 bits (441), Expect = 5.5e-40
Identity = 93/109 (85.32%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+G+VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSILSSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRP 155

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_023549516.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 9.4e-40
Identity = 92/109 (84.40%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+G+VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSI+SSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKRP 155

[Close]

BLAST of Carg02353 vs. NCBI nr
Match: XP_022939492.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 171.8 bits (434), Expect = 3.6e-39
Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+GVVFNLLQIAFSL NIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGVVFNLLQIAFSLLNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSI+SSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKRP 155

[Close]

BLAST of Carg02353 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.2e-18
Identity = 49/113 (43.36%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLF-----NIVKNRNGTILFDFFGDKFLSYLLATSTAA 69
           +YRYMLATI++G+ + +LQIAF+L+     N + + +G + FDFFGDK +SY+L T  AA
Sbjct: 55  AYRYMLATIVIGLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAA 114

Query: 70  GFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           GF  + D++        F  F  K YA+++LLL  F C+A +S+ SS+A  K+
Sbjct: 115 GFASTKDIKPVFSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYALPKQ 167

[Close]

BLAST of Carg02353 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.7e-18
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQ--IAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFG 69
           +YRYML+  ++G+V+ ++Q  +  S F   K    T  FDF+GDK +SYLLAT +AAGFG
Sbjct: 58  AYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFG 117

Query: 70  VSVDLQRTK------DPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VS DL+ T       D  D    FF K YA+++LLLFAF   A +S+ SS A SKRP
Sbjct: 118 VSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Carg02353 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.0e-17
Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 0


Query: 2   GTYYTLND--SYRYMLATIIVGVVFNLLQIAFSLFNIVK-NR----NGTILFDFFGDKFL 61
           G     ND  +YRYM++TII+G  +NLLQ+A S+F +V  NR    +G  LFDFFGDK +
Sbjct: 50  GVEIKFNDIYAYRYMISTIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKII 109

Query: 62  SYLLATSTAAGFGVSVDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAF 118
           SYLL + +AAGFGV+V+L R         +F  KA A+++LLL AF  +A  S  +SFA 
Sbjct: 110 SYLLISGSAAGFGVTVELGRGVPS----NSFMDKANASASLLLIAFLFTAVASTFTSFAL 168

[Close]

BLAST of Carg02353 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-17
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNI---VKNRNGTILFDFFGDKFLSYLLATSTAAGF 69
           +YRYML+  ++G+V+ ++Q+ F++      VKN     L DF+GDK +SYL+AT +AAGF
Sbjct: 58  AYRYMLSAAVIGLVYAVIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGF 117

Query: 70  GVSVDLQRT------KDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           GV+ DL+ T       D  D    FF K YA+++LLLFAF C A +S+ SSFA +KR
Sbjct: 118 GVTKDLKDTFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of Carg02353 vs. ExPASy Swiss-Prot
Match: D7LD60 (CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903205 PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.6e-16
Identity = 50/117 (42.74%), Postives = 73/117 (62.39%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTI--LFDFFGDKFLSYLLATSTAAGFG 69
           +YRYML+  ++G+++ ++Q+  ++          +   F+F+GDK +SYLLAT +AAGFG
Sbjct: 58  AYRYMLSAAVIGLLYAVVQLFLTISQFATGTTHPLNYQFNFYGDKIISYLLATGSAAGFG 117

Query: 70  VSVDLQRT------KDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VS DL+ T       D  D    FF K YA+++LLLFAF   A +S+ SS A SKRP
Sbjct: 118 VSKDLKETFLALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Carg02353 vs. ExPASy TrEMBL
Match: A0A6J1FG26 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445380 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 4.2e-46
Identity = 102/109 (93.58%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATIIV +VFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS
Sbjct: 48  TYRYVLATIIVEIVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQRTKDPEDLFGTFF KAYA SALLLFAFFCSAAVSILSSFA SKRP
Sbjct: 108 VDLQRTKDPEDLFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRP 156

[Close]

BLAST of Carg02353 vs. ExPASy TrEMBL
Match: A0A6J1JQU5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 2.7e-40
Identity = 93/109 (85.32%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+G+VFNLLQIAFSLFNIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSILSSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRP 155

[Close]

BLAST of Carg02353 vs. ExPASy TrEMBL
Match: A0A6J1FGY1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.7e-39
Identity = 92/109 (84.40%), Postives = 98/109 (89.91%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVS 69
           +YRY+LATII+GVVFNLLQIAFSL NIVK   GTILFDFFGDKFLSYLLAT TAAGFG+S
Sbjct: 48  TYRYVLATIIIGVVFNLLQIAFSLLNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLS 107

Query: 70  VDLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VDLQ T DP+D FGTFF KAYA SALLLFAFFCSAAVSI+SSFA SKRP
Sbjct: 108 VDLQ-TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKRP 155

[Close]

BLAST of Carg02353 vs. ExPASy TrEMBL
Match: A0A1S3C9H1 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38
Identity = 91/107 (85.05%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 11  YRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSV 70
           +RYMLATII+G+VFNLLQIAFSLFNIVKN +GTILFDFFGDKFLSYLLAT  AAGFGV V
Sbjct: 49  FRYMLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGV 108

Query: 71  DLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           DL++ KDP+DLF TFF KAYA SALLLFAFFCSAAVSILSSFA SKR
Sbjct: 109 DLKK-KDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of Carg02353 vs. ExPASy TrEMBL
Match: A0A0A0KU83 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 8.0e-37
Identity = 88/107 (82.24%), Postives = 95/107 (88.79%), Query Frame = 0


Query: 11  YRYMLATIIVGVVFNLLQIAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFGVSV 70
           +RYMLATII+G+VFNLLQIAFSLFNIVKN +GTILFDFFGDKFLSYLLAT  AAGFGV V
Sbjct: 49  FRYMLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGV 108

Query: 71  DLQRTKDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           DL++  DP+DLF  FF KAYA S LLLFAFFCSAAVSILSSFA SKR
Sbjct: 109 DLKKV-DPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKR 154

[Close]

BLAST of Carg02353 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-19
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQ--IAFSLFNIVKNRNGTILFDFFGDKFLSYLLATSTAAGFG 69
           +YRYML+  ++G+V+ ++Q  +  S F   K    T  FDF+GDK +SYLLAT +AAGFG
Sbjct: 58  AYRYMLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFG 117

Query: 70  VSVDLQRTK------DPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKRP 119
           VS DL+ T       D  D    FF K YA+++LLLFAF   A +S+ SS A SKRP
Sbjct: 118 VSKDLKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKRP 174

[Close]

BLAST of Carg02353 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18
Identity = 54/117 (46.15%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 10  SYRYMLATIIVGVVFNLLQIAFSLFNI---VKNRNGTILFDFFGDKFLSYLLATSTAAGF 69
           +YRYML+  ++G+V+ ++Q+ F++      VKN     L DF+GDK +SYL+AT +AAGF
Sbjct: 58  AYRYMLSAAVIGLVYAVIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGF 117

Query: 70  GVSVDLQRT------KDPEDLFGTFFGKAYATSALLLFAFFCSAAVSILSSFAFSKR 118
           GV+ DL+ T       D  D    FF K YA+++LLLFAF C A +S+ SSFA +KR
Sbjct: 118 GVTKDLKDTFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

The following BLAST results are available for this feature:

BLAST of Carg02353 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016239.1	1.6e-55	100.00	CASP-like protein 4D1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022939491.1	8.7e-46	93.58	CASP-like protein 4D1 [Cucurbita moschata]	[more]
XP_022992767.1	5.5e-40	85.32	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_023549516.1	9.4e-40	84.40	CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]	[more]
XP_022939492.1	3.6e-39	84.40	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of Carg02353 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	1.2e-18	43.36	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
Q8GWD5	4.7e-18	47.86	CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1	[more]
C6T1Z6	1.0e-17	47.15	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
Q56X75	1.8e-17	46.15	CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1	[more]
D7LD60	2.6e-16	42.74	CASP-like protein 4D1 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Carg02353 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FG26	4.2e-46	93.58	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445380 PE=3 SV=1	[more]
A0A6J1JQU5	2.7e-40	85.32	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1	[more]
A0A6J1FGY1	1.7e-39	84.40	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1	[more]
A0A1S3C9H1	1.1e-38	85.05	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1	[more]
A0A0A0KU83	8.0e-37	82.24	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1	[more]

BLAST of Carg02353 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39530.1	3.3e-19	47.86	Uncharacterised protein family (UPF0497)	[more]
AT2G39518.1	1.3e-18	46.15	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 5..102 e-value: 2.5E-10 score: 40.3
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 10..117
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 10..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02353-RA	Carg02353-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding