Carg02313 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02313
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	glutaredoxin
Location	Carg_Chr15: 1790215 .. 1792094 (-)
RNA-Seq Expression	Carg02313
Synteny	Carg02313

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAATTTGAGTTTCTTTATTTTTCTGTTACTCATTTCTTTCAGACCTCGCATCGTTAGGGTTGCTGCAAATCGAGGATTTTCGATAATGGCGTTGGAGAAGGCTAAACAGATTGTGGGTTCCAATCCCGTCGCCGTCTTCAGGTTCATCCTTCGATCTTCTTGTTTCTCTTTTTATGAATCTATTTCTCGGCTTTACGAATGGATTTTCGCTGATTGCTAAATGGATGCTGTTTTGTTCTTCTGTTTCAAATCACAGCAAGACTTCCTGTCCTTACTGCGTCCAGGTGAAGAGATTGTTGACTGGTCTGGGAGCCAATTTTAAGGCTGTTGAATTGGACACTGAGAGTACGTACTCTATGTTTCTTCGTTTGATTTCTTTGCGTTCGCTATTTTAATCTCACCTTGTGTACCTGCATGCCATCGGTTTGGTTATCGATGGATCGTGCGACTTTATTTTTCTGTTCTGCGCTCTGCGTTCTGCTGCTTGCGGATTTAGGATTGGTAACAGTATCGTTGTTTTCTATAGCTTCTTGAAATTAATGGAATATTGATTGACTTTCCCCCGATTGTTTGGGATTCGGATTGTGTTAGTTAACTGTTTCGTGCTCTGGATGCATCTTTGAATACATGTTCTTTCTCTTGTTCTTTAAGACAAGGAAAACTTTCAAAAGGAGAACTTAAAGCATTTTTAACTATTCACTGTTCTCGTGAATCAACTGTTGGCGATTTTGAAATGTCTTTTCATGCTCCAACGTGTTCAAAGGGATTCAGTTTGAAAGATGGAGTCTGGGAAAAAGACGAGTAGTGCATCCGTTGAATGTTTGATGACTTTTTCAGAGAATCTGTCTGTAACCTTTCGATGGAAGCTATAAGTATAGTCTGGATTTTATTGTTTACTTTTCCACCGTTTTAACTTCTAAGCACCGAATATTTTGTGAAATTCAACCGGGTCCATCCTAATCCTTTGGCATCTTTAGGTTTGACTTTTCTTCTATTGCAAGATTGTATTCATGAATCGCATATTATTGAGTTTTCTACTCTTCTAGCACTGAGCAGGATTTGCACCCAATTCTTTGATGATCATTATTTTTATATGCTTTCAAAGCTTTCTAGTCATGCATACTTCCCAACTTGGCTGCTGATTAACTAGATTAAATTGATTGTAAAGGTGATGGAAGTGAGATTCAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTCCCCAATGTGTTCATAGGTGGGAAGCACATTGGTGGCTGTGATGGTAAATTTTTCACTACCCTCTCAACTTGAATGACCATTATGTTTATGATATACAAACACTCGATGCATTTATAAGTTTTTGAATTACCAAAATGGAAGGCTTTTAAATTTGAAGAGCTTTCTTTTTAATCGATATAAGTGATTCACATGTTATGGTTTGTACAGTCAAATTACTATTCAAACCCACATGTTAGAGGAATTAAGGGTCAGTAGACCATAATCTAATCTAAGCTTTTTAATCCCTAGTTTCTCTTATTAAGATTTTTTTTGTTTTTTTGGTTGCTTCGCAGCAACAGTAGCACTGAATAGTAAAGGGGGACTGGTTCCTCTCCTGGCTGAAGCAGGAGCGACTGCCAAAGTCTCTGCTTAGAAGGAGTCTGAGTTATGTTATTACACAGTTCAATTGGATGAATAAACCTTCTACTTGTGGTTGTTTCTTGCTCTACTGTTGGCATTTCTACCCTAAAAAAAATGCTTTCAGAGTTGACCTTTTAGTTGCTTGTTGAAATAACTGGAAGGAACCTGTGCTTCCTTTGCATCTAATTATAAGTGTCCGTGGTTTTACTGTAATCTGATTTCTTTTTAGTAATTAGTATGCCGAAATTTTCTTCGCT

mRNA sequence

GAATTTGAGTTTCTTTATTTTTCTGTTACTCATTTCTTTCAGACCTCGCATCGTTAGGGTTGCTGCAAATCGAGGATTTTCGATAATGGCGTTGGAGAAGGCTAAACAGATTGTGGGTTCCAATCCCGTCGCCGTCTTCAGCAAGACTTCCTGTCCTTACTGCGTCCAGGTGAAGAGATTGTTGACTGGTCTGGGAGCCAATTTTAAGGCTGTTGAATTGGACACTGAGAGTGATGGAAGTGAGATTCAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTCCCCAATGTGTTCATAGGTGGGAAGCACATTGGTGGCTGTGATGCAACAGTAGCACTGAATAGTAAAGGGGGACTGGTTCCTCTCCTGGCTGAAGCAGGAGCGACTGCCAAAGTCTCTGCTTAGAAGGAGTCTGAGTTATGTTATTACACAGTTCAATTGGATGAATAAACCTTCTACTTGTGGTTGTTTCTTGCTCTACTGTTGGCATTTCTACCCTAAAAAAAATGCTTTCAGAGTTGACCTTTTAGTTGCTTGTTGAAATAACTGGAAGGAACCTGTGCTTCCTTTGCATCTAATTATAAGTGTCCGTGGTTTTACTGTAATCTGATTTCTTTTTAGTAATTAGTATGCCGAAATTTTCTTCGCT

Coding sequence (CDS)

ATGGCGTTGGAGAAGGCTAAACAGATTGTGGGTTCCAATCCCGTCGCCGTCTTCAGCAAGACTTCCTGTCCTTACTGCGTCCAGGTGAAGAGATTGTTGACTGGTCTGGGAGCCAATTTTAAGGCTGTTGAATTGGACACTGAGAGTGATGGAAGTGAGATTCAAGCAGCACTTGCTCAGTGGACTGGACAGCGGACCGTCCCCAATGTGTTCATAGGTGGGAAGCACATTGGTGGCTGTGATGCAACAGTAGCACTGAATAGTAAAGGGGGACTGGTTCCTCTCCTGGCTGAAGCAGGAGCGACTGCCAAAGTCTCTGCTTAG

Protein sequence

MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQWTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA

Homology

[Close]

BLAST of Carg02313 vs. NCBI nr
Match: KAG7016200.1 (hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Carg02313 vs. NCBI nr
Match: KAG6578661.1 (Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.0 bits (541), Expect = 1.3e-51
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ
Sbjct: 315 MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 374

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA
Sbjct: 375 WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 421

[Close]

BLAST of Carg02313 vs. NCBI nr
Match: XP_022938379.1 (glutaredoxin [Cucurbita moschata])

HSP 1 Score: 211.5 bits (537), Expect = 3.7e-51
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLG NFKAVELDTESDGSEIQAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGVNFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Carg02313 vs. NCBI nr
Match: XP_022993774.1 (glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 6.3e-51
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAKQIV SNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Carg02313 vs. NCBI nr
Match: XP_022134425.1 (glutaredoxin [Momordica charantia])

HSP 1 Score: 186.4 bits (472), Expect = 1.3e-43
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAK+IV SNPVAVFSK+ CP+CV VK+LLT +GA+FKAVELD ESDGSEIQAALAQ
Sbjct: 1   MALEKAKEIVSSNPVAVFSKSYCPFCVDVKKLLTEVGASFKAVELDRESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ KGGLVP+LAEAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALHKKGGLVPMLAEAGAVAKVSA 107

[Close]

BLAST of Carg02313 vs. ExPASy Swiss-Prot
Match: Q9ZR41 (Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-39
Identity = 81/106 (76.42%), Postives = 90/106 (84.91%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           M+L KAK+IV  NPVAVFSKT CP+CV VK LL+ LGA FKAVELD+E DGSEIQAALA+
Sbjct: 1   MSLAKAKEIVSGNPVAVFSKTYCPFCVSVKDLLSKLGATFKAVELDSEKDGSEIQAALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVS 107
           WTGQRTVPNVFIG KHIGGCDAT AL+ +G L+PLL EAGA AK S
Sbjct: 61  WTGQRTVPNVFIGRKHIGGCDATTALHREGKLLPLLTEAGAIAKTS 106

[Close]

BLAST of Carg02313 vs. ExPASy Swiss-Prot
Match: P55143 (Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-37
Identity = 75/101 (74.26%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MA+ K K++V SN V VFSKT CPYC  VK+LL  LGA +K VELDTESDGSEIQ ALA+
Sbjct: 1   MAMTKTKELVSSNAVVVFSKTYCPYCTSVKKLLDQLGAKYKVVELDTESDGSEIQTALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGA 102
           WTGQRTVPNVFIGGKHIGGCD+T A +S+G LVPLL EAGA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDSTTAKHSQGQLVPLLTEAGA 101

[Close]

BLAST of Carg02313 vs. ExPASy Swiss-Prot
Match: Q9FNE2 (Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-37
Identity = 78/107 (72.90%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MA++KAK+IV S  V VFSKT CPYCV+VK LL  LGA FKAVELDTESDGS+IQ+ LA+
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGG HIGGCDAT  L+  G LVPLL EAGA A  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Carg02313 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 154.1 bits (388), Expect = 9.1e-37
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MAL KAK+ V S PV V+SK+ CP+CV+VK+L   LGA FKA+ELD ESDGSE+Q+ALA+
Sbjct: 1   MALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATA 104
           WTGQRTVPNVFI GKHIGGCD T+ALN++G LVPLL EAGA A
Sbjct: 61  WTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGAIA 103

[Close]

BLAST of Carg02313 vs. ExPASy Swiss-Prot
Match: Q6K953 (Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4 PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-36
Identity = 75/106 (70.75%), Postives = 87/106 (82.08%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MAL+KAK+IV S+PV VFSKT CP+C +VKRLL  L A++KAVELD ESDGSE+Q+ALA 
Sbjct: 27  MALDKAKEIVASSPVVVFSKTYCPFCARVKRLLAELAASYKAVELDVESDGSELQSALAD 86

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVS 107
           WTGQRTVP VFI GKHIGGCD T+A++  G LVPLL EAGA A  S
Sbjct: 87  WTGQRTVPCVFIKGKHIGGCDDTMAMHKGGNLVPLLTEAGAIATPS 132

[Close]

BLAST of Carg02313 vs. ExPASy TrEMBL
Match: A0A6J1FDX0 (glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLG NFKAVELDTESDGSEIQAALAQ
Sbjct: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGVNFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Carg02313 vs. ExPASy TrEMBL
Match: A0A6J1K114 (glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.0e-51
Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAKQIV SNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ
Sbjct: 1   MALEKAKQIVASNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 107

[Close]

BLAST of Carg02313 vs. ExPASy TrEMBL
Match: A0A6J1BY96 (glutaredoxin OS=Momordica charantia OX=3673 GN=LOC111006676 PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 6.1e-44
Identity = 92/107 (85.98%), Postives = 100/107 (93.46%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAK+IV SNPVAVFSK+ CP+CV VK+LLT +GA+FKAVELD ESDGSEIQAALAQ
Sbjct: 1   MALEKAKEIVSSNPVAVFSKSYCPFCVDVKKLLTEVGASFKAVELDRESDGSEIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGGKHIGGCDATVAL+ KGGLVP+LAEAGA AKVSA
Sbjct: 61  WTGQRTVPNVFIGGKHIGGCDATVALHKKGGLVPMLAEAGAVAKVSA 107

[Close]

BLAST of Carg02313 vs. ExPASy TrEMBL
Match: A0A0A0KR45 (Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 7.5e-42
Identity = 90/107 (84.11%), Postives = 98/107 (91.59%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAK+IV SNPVAVFSK+ CP+CVQVKRLLT LG +FKA+ELDTESDG EIQAALAQ
Sbjct: 1   MALEKAKEIVASNPVAVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREIQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           +TGQRTVPNVFIGGKHIGGCD T+ALNS G LVPLLAEAGA AKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Carg02313 vs. ExPASy TrEMBL
Match: A0A5A7T277 (Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G001730 PE=3 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.8e-41
Identity = 88/107 (82.24%), Postives = 97/107 (90.65%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MALEKAK+IV SNPV VFSK+ CP+CVQVKRLLT LG +FKA+ELDTESDG E+QAALAQ
Sbjct: 1   MALEKAKEIVASNPVTVFSKSYCPFCVQVKRLLTKLGVSFKAIELDTESDGREVQAALAQ 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           +TGQRTVPNVFIGGKHIGGCD T+ALNS G LVPLLAEAGA AKV+A
Sbjct: 61  FTGQRTVPNVFIGGKHIGGCDDTMALNSSGRLVPLLAEAGAIAKVAA 107

[Close]

BLAST of Carg02313 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 156.8 bits (395), Expect = 1.0e-38
Identity = 78/107 (72.90%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           MA++KAK+IV S  V VFSKT CPYCV+VK LL  LGA FKAVELDTESDGS+IQ+ LA+
Sbjct: 1   MAMQKAKEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAE 60

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQRTVPNVFIGG HIGGCDAT  L+  G LVPLL EAGA A  +A
Sbjct: 61  WTGQRTVPNVFIGGNHIGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 107

[Close]

BLAST of Carg02313 vs. TAIR 10
Match: AT5G40370.2 (Glutaredoxin family protein )

HSP 1 Score: 136.3 bits (342), Expect = 1.4e-32
Identity = 67/91 (73.63%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 17  VFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQWTGQRTVPNVFIGGKH 76
           + SKT CPYCV+VK LL  LGA FKAVELDTESDGS+IQ+ LA+WTGQRTVPNVFIGG H
Sbjct: 42  ICSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRTVPNVFIGGNH 101

Query: 77  IGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           IGGCDAT  L+  G LVPLL EAGA A  +A
Sbjct: 102 IGGCDATSNLHKDGKLVPLLTEAGAIAGKTA 132

[Close]

BLAST of Carg02313 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 1.8e-32
Identity = 67/107 (62.62%), Postives = 80/107 (74.77%), Query Frame = 0


Query: 1   MALEKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELDTESDGSEIQAALAQ 60
           + + KAK+IV + PV VFSKT C YC +VK+LLT LGA FK +ELD  SDG EIQ+AL++
Sbjct: 17  VVVNKAKEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSE 76

Query: 61  WTGQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEAGATAKVSA 108
           WTGQ TVPNVFI G HIGGCD  +  N +G LVPLL EAGA A  S+
Sbjct: 77  WTGQTTVPNVFIKGNHIGGCDRVMETNKQGKLVPLLTEAGAIADNSS 123

[Close]

BLAST of Carg02313 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-20
Identity = 53/97 (54.64%), Postives = 62/97 (63.92%), Query Frame = 0


Query: 4   EKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELD-TESDGSEIQAALAQWT 63
           E  K  V  NPV V+SKT C Y  QVK L   L      VELD   S+GS++Q  L + T
Sbjct: 76  ETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLGSEGSQLQNVLEKIT 135

Query: 64  GQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEA 100
           GQ TVPNVFIGGKHIGGC  T+ L++KG L  +LAEA
Sbjct: 136 GQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAILAEA 172

[Close]

BLAST of Carg02313 vs. TAIR 10
Match: AT4G28730.1 (Glutaredoxin family protein )

HSP 1 Score: 92.4 bits (228), Expect = 2.3e-19
Identity = 49/97 (50.52%), Postives = 59/97 (60.82%), Query Frame = 0


Query: 4   EKAKQIVGSNPVAVFSKTSCPYCVQVKRLLTGLGANFKAVELD-TESDGSEIQAALAQWT 63
           E  ++ V  N V ++SKT C YC +VK L   LG     VELD     G ++Q  L + T
Sbjct: 71  ESIRKTVTENTVVIYSKTWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGPQLQKVLERLT 130

Query: 64  GQRTVPNVFIGGKHIGGCDATVALNSKGGLVPLLAEA 100
           GQ TVPNVF+ GKHIGGC  TV LN KG L  +LAEA
Sbjct: 131 GQHTVPNVFVCGKHIGGCTDTVKLNRKGDLELMLAEA 167

The following BLAST results are available for this feature:

BLAST of Carg02313 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016200.1	1.3e-51	100.00	hypothetical protein SDJN02_21305 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578661.1	1.3e-51	100.00	Isocitrate dehydrogenase [NADP], chloroplastic/mitochondrial, partial [Cucurbita...	[more]
XP_022938379.1	3.7e-51	99.07	glutaredoxin [Cucurbita moschata]	[more]
XP_022993774.1	6.3e-51	99.07	glutaredoxin isoform X1 [Cucurbita maxima] >XP_023551689.1 glutaredoxin [Cucurbi...	[more]
XP_022134425.1	1.3e-43	85.98	glutaredoxin [Momordica charantia]	[more]

BLAST of Carg02313 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR41	1.2e-39	76.42	Glutaredoxin OS=Solanum lycopersicum OX=4081 PE=3 SV=1	[more]
P55143	1.4e-37	74.26	Glutaredoxin OS=Ricinus communis OX=3988 PE=3 SV=1	[more]
Q9FNE2	1.4e-37	72.90	Glutaredoxin-C2 OS=Arabidopsis thaliana OX=3702 GN=GRXC2 PE=3 SV=1	[more]
P55142	9.1e-37	71.84	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]
Q6K953	2.7e-36	70.75	Glutaredoxin-C4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC4...	[more]

BLAST of Carg02313 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FDX0	1.8e-51	99.07	glutaredoxin OS=Cucurbita moschata OX=3662 GN=LOC111444645 PE=3 SV=1	[more]
A0A6J1K114	3.0e-51	99.07	glutaredoxin isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489683 PE=3 SV=1	[more]
A0A6J1BY96	6.1e-44	85.98	glutaredoxin OS=Momordica charantia OX=3673 GN=LOC111006676 PE=3 SV=1	[more]
A0A0A0KR45	7.5e-42	84.11	Glutaredoxin OS=Cucumis sativus OX=3659 GN=Csa_5G523190 PE=3 SV=1	[more]
A0A5A7T277	2.8e-41	82.24	Glutaredoxin-C6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G0017...	[more]

BLAST of Carg02313 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40370.1	1.0e-38	72.90	Glutaredoxin family protein	[more]
AT5G40370.2	1.4e-32	73.63	Glutaredoxin family protein	[more]
AT5G63030.1	1.8e-32	62.62	Thioredoxin superfamily protein	[more]
AT2G20270.1	1.2e-20	54.64	Thioredoxin superfamily protein	[more]
AT4G28730.1	2.3e-19	50.52	Glutaredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 74..87 score: 46.13 coord: 60..73 score: 63.1 coord: 15..33 score: 49.12
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 15..94 e-value: 2.7E-29 score: 99.2
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 15..77 e-value: 1.7E-21 score: 76.2
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 1..107 e-value: 2.2E-40 score: 138.9
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 1..106
None	No IPR available	PANTHER	PTHR45694:SF14	GLUTAREDOXIN-C2	coord: 1..106
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 3..103 score: 26.906744
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 14..95 e-value: 5.88728E-48 score: 145.76
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 17..33
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 3..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02313-RA	Carg02313-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity