Carg02307 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02307
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Proteasome assembly chaperone 3
Location	Carg_Chr15: 1751198 .. 1754473 (-)
RNA-Seq Expression	Carg02307
Synteny	Carg02307

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATAAATTGTAAGGGCGCTGCTTAAAGAACTAGAAGAACAGAGAAAAACAAATGGTAGGTGGATTGACTTCGAAGTTGAAGAGTTGGTGAGCAAAGCAACTTGATTGACTTGACCCTAGTCAGGACACTTTGACTCTTCCTTCCCGCATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGTATGGATTACTTGCTCCGGATTAAATTAATCCATCCTCTTCAGTCCTTGAACGAATTCGGGATTTGGGTGTTGTGATTTTCCCTGTAGCAGCGTTGTTTTCTAGGGTTGATTTTAATTTAAAGGATTCGCGTTTGCACACAACCTGTTTGCTTAAATGCCGCAGCTAGTTTTATTAGCTTTAATAGACTGGTGATTCGTCTGCGAGTTGCTGATGGGGAAGCTTGAATTTGGATGATACGGAAACAAATTTAAATTGGGGTTAAGTGATTTGAGTTAGGAATTCGAGTTAGGGATATGCAGGATGTTTACCGAAATTAAATTGCTTCTTCCTGCTTGTATTAATCATTTGAATATAATGCTTGATTCAAATCCTCCTTGCGGCTTATTGTTTTTCATCGATAGTTACTTGATTTTGATGAACATATTCAGGATTCTACACCTGTCATTGTATATTTTTTGAACATCTGTGGATTTCATTGCCTATGTTCTAGTTCAAATTCAGGGCACTTTACTATTCATCATTGGTTAGCTCAGGGAGTTAGTAATCTCATTCATATGTCTTCTGCTTTCAGGGAATCAAAACGGATATAGTCGTTTGTCGCCACGACGATCATTTTCTTGTCAGTAGGAGTTCGGTTTTATATTATTACAAGTGCATATGTTTTTGTTGGAGGAGGATGGGGAAATGGGGATTTTGGTATCTATTAGTGTGTGTTCTTTACATCTCTGATGTTTGAAACTGATTTGAAGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGTGAGCAATTACTGGTCATTTCTGCAAAATTTAGCGATTCTATGCCATCAAATAGACATATTTGTAATCAAACTGACATCACTTAAGTTCACAACCATTACACTTCGTAGACTTTTCTTTGGACGAGTAACACTTCATAGATTTCAGCTTAAATATTGCTGAAATCTTTTGAAAGGTCAAAAAATTAACTTCCCAAGTTATTGGAACTAATGATTTATGCTTATTTTGTTATGCTATATTAGAAGCTTCTTATACATCTATATGTTACAATCCGCAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGGTAAACCTTCCAATTCAACATCATCGAACTTTATGGTTTGAACACTTCTACTCCTTTTGAAGATCTGACTTCTGGGCATGTGTGCATGTGCTCGTTGGAAATCTGCGGATAATGTATACAATAACCGAAACGTGCTATATTTCTATTAAGTAGATAACCTGTCTTAATGTTTGGGATCTTGACTTGTCAGACTCTGATTTATGGAAATGCTACATTCCTTATTTGGTGTCTTTTAGCTTTGCTGGGTGTCCTACTAGAGACGCTTCTTAAAGCTTCTTTAACATGGCTTAATGCTTAATGAGAGATCCAACTATAGAGCTTAAAACTTGTCATATTATAAGGAATGCTTTCTTTGTTCGCTTCTCCACTCCAACTGGTGTGAGATCTCACAATAGCCCAAAGAAGACAATATCTGCTAGCGGTAGGCTTGGGCTATTACAAATGGTATCAGAGCTAGACACCAAGCGGAGTGCCAGCGAGGACGCTAGGACCCTAAGGGGGGGGTGGATTGTGAGATCCTACATTGGTTGGAGAGGGGAACGAAACATTCCTTATAAAAGTGTAGAAACCTCTCCTAACCTTAAGGGGAAGCTTCAAAGTGAAAGTTTAAAGAGGACAATATCTGCTAGCAGAGGGCTTAGCTGTTACAAGAAGAGAGGATGACTTTCATCTCCTTCAACCCATTGTTTATTTCTGAAGCCTCAATATATACGGTCCAAAATTAAGGTCCTTAACCTTTTTGAGTGGTAACTGTGACTAAGTAGATGGGTAGAATTTTGTGGTGATGCTTGGCAATTCCACTTTCTCTGGGAGGGAGAACTTTATGGCAATTCAAGGGCTTTTCACTACTACTTTAAGACATTTACTTGATGTAGACCCACTTGTAGAATTCTTAGAATACATTTATTGATGTGTTGAATATTGAAGCATATAACTTTTTACGTCCCATCAAGATAGCCATATTCAAATAACATGCTGAAATTATTCTTTTGTTTATGCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGTAATTACTCAAATATGTTATTTTTCCAGACTTGGTAAAATGAATAAGTTTAATTGGATTCTTCCTGTTTTGCAGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAATATTTGACTTTTGCTGCTTAAACCCTCGTTTTGTTCACATTCAGTAAGATACATATTTATATTCCTACTTCTGTGACCTGTTTTGGTGGGGTTTTGACGATTTTATTGGCAAATGACCTCTCGATTGTCTGATCAATAAGATAGTAGACACGAGAATGAGATTTCAATAGTAGATTGTGTGAATTAGCTCTATTTTTTTTTAGTTGACGATATATTAGTGAAGATTCAAACATCTAACTTTAAGAATAGATGTAATAGCTTATCTTGTTTGTTGGAGAATGATACGTGGTTCACGGCATTCAAACATCTAACTTTAAGAATAGATGTAATATCTTATCATGTTTGTTGGAGAATGAAACGTGGTTCACGGCAAGCACTACAATGGAAGGTTCTAAAGCCACCCATTAGTGACTCAGTGGCTTGCTTTTCATATTGTAGCCCACTGTGGTCGGAAATGCATGGTGGAATGGTGGAGTCTGAGAAAAGAGGGCATAATAAGAAAGTACAAAATCATAATTTTAAAAATCAACTGTACTAGCATAATTAATCTTATGAAATCATAACTCTATAATAAACAGTATCACATGCTATTGCAAAAATGTAGGCTAAATAAAATTTCAAGCTTT

mRNA sequence

TAAATAAATTGTAAGGGCGCTGCTTAAAGAACTAGAAGAACAGAGAAAAACAAATGGTAGGTGGATTGACTTCGAAGTTGAAGAGTTGGTGAGCAAAGCAACTTGATTGACTTGACCCTAGTCAGGACACTTTGACTCTTCCTTCCCGCATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGGAATCAAAACGGATATAGTCGTTTGTCGCCACGACGATCATTTTCTTGTCAGTAGGAGTTCGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAATATTTGACTTTTGCTGCTTAAACCCTCGTTTTGTTCACATTCAGTAAGATACATATTTATATTCCTACTTCTGTGACCTGTTTTGGTGGGGTTTTGACGATTTTATTGGCAAATGACCTCTCGATTGTCTGATCAATAAGATAGTAGACACGAGAATGAGATTTCAATAGTAGATTGTGTGAATTAGCTCTATTTTTTTTTAGTTGACGATATATTAGTGAAGATTCAAACATCTAACTTTAAGAATAGATGTAATATCTTATCATGTTTGTTGGAGAATGAAACGTGGTTCACGGCAAGCACTACAATGGAAGGTTCTAAAGCCACCCATTAGTGACTCAGTGGCTTGCTTTTCATATTGTAGCCCACTGTGGTCGGAAATGCATGGTGGAATGGTGGAGTCTGAGAAAAGAGGGCATAATAAGAAAGTACAAAATCATAATTTTAAAAATCAACTGTACTAGCATAATTAATCTTATGAAATCATAACTCTATAATAAACAGTATCACATGCTATTGCAAAAATGTAGGCTAAATAAAATTTCAAGCTTT

Coding sequence (CDS)

ATGGAAAGCTCGGGTGGTACTCGCTTTCCGGTTTCCCACAAGCAGGCCTCATCGGAAATCAAGGGAATCAAAACGGATATAGTCGTTTGTCGCCACGACGATCATTTTCTTGTCAGTAGGAGTTCGGTTATTGCAACTCAAATTGGAGCAATGGGGACTATGCTGCAAGCGAGGAAGGAGGAGGGGATGGCAATTCATTCAACCTTCTCAGTGTCTACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTACGTTATAGTAGTTTGTTACTGAATAATGCTGCGATTGATACATGGAATTTTCAGCCGATGCTGGTCGCATGTGCACGTCAGTTGATCGAACAAATCAGTTTATCAGGTTCATACAAGCCATTATTAATCTCTCTTGGCCTAAAAGACCATTCTGTGGAGACAATGAGAGGCATTGTTACTGCCGTGTCTGAGAATAAACTTTGGTAA

Protein sequence

MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKEEGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMRGIVTAVSENKLW

Homology

[Close]

BLAST of Carg02307 vs. NCBI nr
Match: KAG7016194.1 (hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299.3 bits (765), Expect = 1.9e-77
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 153
           SYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 152

[Close]

BLAST of Carg02307 vs. NCBI nr
Match: XP_022939014.1 (uncharacterized protein LOC111445047 isoform X1 [Cucurbita moschata] >KAG6578653.1 Proteasome assembly chaperone 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 228.8 bits (582), Expect = 3.2e-56
Identity = 125/152 (82.24%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 153
           SYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]

BLAST of Carg02307 vs. NCBI nr
Match: XP_022993682.1 (uncharacterized protein LOC111489603 isoform X1 [Cucurbita maxima] >XP_023551096.1 uncharacterized protein LOC111809020 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 1.6e-55
Identity = 124/152 (81.58%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 153
           SYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]

BLAST of Carg02307 vs. NCBI nr
Match: XP_022939015.1 (uncharacterized protein LOC111445047 isoform X2 [Cucurbita moschata] >XP_022939016.1 uncharacterized protein LOC111445047 isoform X3 [Cucurbita moschata])

HSP 1 Score: 224.2 bits (570), Expect = 7.8e-55
Identity = 124/151 (82.12%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 152
           SYKPLLISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 124

[Close]

BLAST of Carg02307 vs. NCBI nr
Match: XP_022993683.1 (uncharacterized protein LOC111489603 isoform X2 [Cucurbita maxima] >XP_022993684.1 uncharacterized protein LOC111489603 isoform X3 [Cucurbita maxima] >XP_023551097.1 uncharacterized protein LOC111809020 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023551098.1 uncharacterized protein LOC111809020 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-54
Identity = 123/151 (81.46%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 152
           SYKPLLISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 124

[Close]

BLAST of Carg02307 vs. ExPASy Swiss-Prot
Match: Q55G88 (Proteasome assembly chaperone 3 OS=Dictyostelium discoideum OX=44689 GN=psmG3 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-05
Identity = 37/144 (25.69%), Postives = 63/144 (43.75%), Query Frame = 0


Query: 10  PVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKEEGMAI-HST 69
           PV  K  S +I  + TDI +    D   ++ S     Q     T ++A K +G+ +   +
Sbjct: 30  PVKSKVLSKKINNVDTDIAISSFADAIFITIS-----QNQKFNTWIRASKSDGILLDEPS 89

Query: 70  FSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLLIS 129
           + + T+ G   +V                      +    ARQLIE I    S K L++S
Sbjct: 90  YQIDTLLGNNQDV----------------------LFSIYARQLIENIG-ETSNKSLMLS 145

Query: 130 LGLKDHSVETMRGIVTAVSENKLW 153
           + + D S +T + I++ + ENK+W
Sbjct: 150 ISITDKSKDTFKQILSTIFENKVW 145

[Close]

BLAST of Carg02307 vs. ExPASy TrEMBL
Match: A0A6J1FFU1 (uncharacterized protein LOC111445047 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445047 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 125/152 (82.24%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 153
           SYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]

BLAST of Carg02307 vs. ExPASy TrEMBL
Match: A0A6J1JTJ3 (uncharacterized protein LOC111489603 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489603 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 7.6e-56
Identity = 124/152 (81.58%), Postives = 124/152 (81.58%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 153
           SYKPLLISLGLKDHSVETMRGIVTAVSENKLW
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKLW 125

[Close]

BLAST of Carg02307 vs. ExPASy TrEMBL
Match: A0A6J1FLG3 (uncharacterized protein LOC111445047 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445047 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.8e-55
Identity = 124/151 (82.12%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 152
           SYKPLLISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 124

[Close]

BLAST of Carg02307 vs. ExPASy TrEMBL
Match: A0A6J1K306 (uncharacterized protein LOC111489603 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489603 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.9e-54
Identity = 123/151 (81.46%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 1   MESSGGTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKE 60
           MESSGGTRFPVSHKQAS EIKGIKTDIVVCRHDDHFL     VIATQIGAMGTMLQARKE
Sbjct: 1   MESSGGTRFPVSHKQASLEIKGIKTDIVVCRHDDHFL-----VIATQIGAMGTMLQARKE 60

Query: 61  EGMAIHSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSG 120
           EGMAIHSTFSVSTVFGKRDE                      PMLVACARQLIEQISLSG
Sbjct: 61  EGMAIHSTFSVSTVFGKRDE----------------------PMLVACARQLIEQISLSG 120

Query: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 152
           SYKPLLISLGLKDHSVETMRGIVTAVSENKL
Sbjct: 121 SYKPLLISLGLKDHSVETMRGIVTAVSENKL 124

[Close]

BLAST of Carg02307 vs. ExPASy TrEMBL
Match: A0A6J1JPF5 (uncharacterized protein LOC111487705 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487705 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.4e-49
Identity = 109/147 (74.15%), Postives = 117/147 (79.59%), Query Frame = 0


Query: 6   GTRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKEEGMAI 65
           G+RFP SHKQAS EIKGIKTD+V+CRHDDHFL     VIATQIGAMGTMLQARKEEGMAI
Sbjct: 5   GSRFPFSHKQASMEIKGIKTDVVICRHDDHFL-----VIATQIGAMGTMLQARKEEGMAI 64

Query: 66  HSTFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPL 125
           H TFSVSTVFGKR+E                      PML+ACARQLIEQISLSGSYKPL
Sbjct: 65  HPTFSVSTVFGKRNE----------------------PMLIACARQLIEQISLSGSYKPL 124

Query: 126 LISLGLKDHSVETMRGIVTAVSENKLW 153
           LISLGLKDHSVETMRGI++AVSEN+LW
Sbjct: 125 LISLGLKDHSVETMRGILSAVSENRLW 124

[Close]

BLAST of Carg02307 vs. TAIR 10
Match: AT5G14710.1 (CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-33
Identity = 77/146 (52.74%), Postives = 94/146 (64.38%), Query Frame = 0


Query: 7   TRFPVSHKQASSEIKGIKTDIVVCRHDDHFLVSRSSVIATQIGAMGTMLQARKEEGMAIH 66
           T FPV H++ S E KG KT+IV+C ++DH L     +IATQIGAMGT+L ARKEEGM++ 
Sbjct: 6   TNFPVRHRKVSFESKGNKTEIVICSYEDHIL-----IIATQIGAMGTILHARKEEGMSVE 65

Query: 67  STFSVSTVFGKRDEVSQLRYSSLLLNNAAIDTWNFQPMLVACARQLIEQISLSGSYKPLL 126
            TFSVS +FGKRDE                      PML A AR+LIE IS     KPL+
Sbjct: 66  PTFSVSVIFGKRDE----------------------PMLTATARRLIEHISSIVPSKPLV 124

Query: 127 ISLGLKDHSVETMRGIVTAVSENKLW 153
           +SLGLKDHS ET++ IV  V EN+LW
Sbjct: 126 LSLGLKDHSSETLKEIVATVIENRLW 124

The following BLAST results are available for this feature:

BLAST of Carg02307 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016194.1	1.9e-77	100.00	hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022939014.1	3.2e-56	82.24	uncharacterized protein LOC111445047 isoform X1 [Cucurbita moschata] >KAG6578653...	[more]
XP_022993682.1	1.6e-55	81.58	uncharacterized protein LOC111489603 isoform X1 [Cucurbita maxima] >XP_023551096...	[more]
XP_022939015.1	7.8e-55	82.12	uncharacterized protein LOC111445047 isoform X2 [Cucurbita moschata] >XP_0229390...	[more]
XP_022993683.1	3.9e-54	81.46	uncharacterized protein LOC111489603 isoform X2 [Cucurbita maxima] >XP_022993684...	[more]

BLAST of Carg02307 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55G88	2.6e-05	25.69	Proteasome assembly chaperone 3 OS=Dictyostelium discoideum OX=44689 GN=psmG3 PE...	[more]

BLAST of Carg02307 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFU1	1.5e-56	82.24	uncharacterized protein LOC111445047 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JTJ3	7.6e-56	81.58	uncharacterized protein LOC111489603 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FLG3	3.8e-55	82.12	uncharacterized protein LOC111445047 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1K306	1.9e-54	81.46	uncharacterized protein LOC111489603 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JPF5	1.4e-49	74.15	uncharacterized protein LOC111487705 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Carg02307 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14710.1	1.4e-33	52.74	CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788)...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018788	Proteasome assembly chaperone 3	PFAM	PF10178	PAC3	coord: 43..92 e-value: 6.9E-8 score: 32.6 coord: 102..149 e-value: 2.1E-12 score: 47.1
IPR018788	Proteasome assembly chaperone 3	PANTHER	PTHR31051	PROTEASOME ASSEMBLY CHAPERONE 3	coord: 5..152
None	No IPR available	GENE3D	3.30.230.90		coord: 7..152 e-value: 1.6E-22 score: 81.7

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02307-RA	Carg02307-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly
cellular_component	GO:0000502	proteasome complex