Carg02260 (gene) Silver-seed gourd (SMH-JMG-627) v2
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Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTGTAAATCCTTCATTTTCTTTTGCTACTTTGGTGTCTGCAATGGTTTGTCTGTTTCGTTTGCTACCTCTTAGTGACATTTGTCCTTGTAGGTTTTAAGCCTGTAAAGCACAGGGTTTTCTCTGGTCTATAACCAGCTGACGGGTCAGATTTTGATGCACTCAACCATGCAATAGAGAGACTTACATGTAATGATGCCAGCGTCTCTGTAACAGCATTAGGGCTTGATTTTAGGTACGGCTTCCACTGGCTGAATTGTTTCCTCTTGCTACGAAAATGGATTTATATTAGCTTAATTTTTCATGTATGTGAACCCATAATAATTGAGTCCTCTACGCAGGTGTGGTTCCTTTCCGTCTCCATTGACAAGTTTTTTTTTCCTCTTAAAGCTTAGAAGTTAGAACCCTCGGGTGCCTCTTGTTTGTTAGTGCCAATCTGTTAATATTCATGAATTCATGTATTTTACCAAGAACATAATATCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGCTTTTAAGGGCCAATCATGTAAATATTAATTCTTTCAAGTTTTATCCTGCAGTCAAAGGCATTTATGAATTATCGCGTACCTTTAAGGGAATTGTTGTTGACTTTTACAATGAATTAAAGAGTATAACGTCGGGATATGCATCATTCGATTACGAGGATTCAGAGTAAGTCTATTGCCTTCTCTATTTCCATTTATAAACCTTAGCTATCGAATCTCCTTTAGTCTTTTTCTGCATGTTCATGTTCTTAATGAAAGATGGTTAATTTTTTTCATATTGTTTTCTTATTCAACATTGAATCATGGTCAATGTCTCTAGCTAATATGCATTCTCAGTTCTGTGGAAAACCTGATGTATATGTAGATTGTGAACAATTATGATTATTAGTATTATAGGCCCTTCTTAGATGCTGTGCTGATATGATGAGTTTTTCAAGGATAGGTAATATGATTACATCATGATGTATTGATGATGGGTGCGATTACCAGGTATCAACAAGCAGATTTGGTGAAACTAGATAGCCTATTGAATGGGCAGCCAGTTTTCATAATTTGAAGGCGCAAAGGGTCGGACGCGAATTGGTGGAAAAACTGAAGAAGTTCATTGACAGGTATGTGTTTAATTTATTTTCCTTCTCCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTGTATGACATGAGCTGTTTTTATGCTGAACAGGCAAATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGTAATGTTCTTATTTTATTTACTTATTTTCTCTAGAAGGTTTTTACTCAGATTTTTATTACATATTCAATATTTGAGTGGCCCAAAACCTTGTAGCCGAACTCTTTCGCCCTGAGACGGAATTATAGTTACTCATTGATTGCCTTCAATTTTCATTGTTAGACTGAATTATTTATGTTGATTTTAGGATCTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCATAG CTGTAAATCCTTCATTTTCTTTTGCTACTTTGGTGTCTGCAATGGTTTGTCTGTTTCGTTTGCTACCTCTTAGTGACATTTGTCCTTGTAGGTTTTAAGCCTGTAAAGCACAGGGTTTTCTCTGGTCTATAACCAGCTGACGGGTCAGATTTTGATGCACTCAACCATGCAATAGAGAGACTTACATGTAATGATGCCAGCGTCTCTGTAACAGCATTAGGGCTTGATTTTAGTCAAAGGCATTTATGAATTATCGCGTACCTTTAAGGGAATTGTTGTTGACTTTTACAATGAATTAAAGAGTATAACGTCGGGATATGCATCATTCGATTACGAGGATTCAGAGTATCAACAAGCAGATTTGGTGAAACTAGATAGCCTATTGAATGGGCAGCCAGTTTTCATAATTTGAAGGCGCAAAGGGTCGGACGCGAATTGGTGGAAAAACTGAAGAAGTTCATTGACAGGCAAATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGATCTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCATAG ATGTTTGAGATTACAATACAAGCTGCGATTGGATCTAAGATTATTGCAAGAGAAACGATCTCGGCCACGAGGAAAAATGTTCTTGCAAAGTGTTATGGTGGAGATGTTACTCGGAAGAGGAAGCTGTTGGAGAAACAAAAGGAAGGGAAAAAATGTATGAAACATGTTGGATCTGTTGATATTCCTCAGGAAGCAATTCATGAAATTCTGAAGGTTTCATAG MFEITIQAAIGSKIIARETISATRKNVLAKCYGGDVTRKRKLLEKQKEGKKCMKHVGSVDIPQEAIHEILKVS Homology
BLAST of Carg02260 vs. NCBI nr
Match: KAG7016148.1 (Translation factor GUF1-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of Carg02260 vs. NCBI nr
Match: XP_023553579.1 (translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553580.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.3 bits (329), Expect = 3.3e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. NCBI nr
Match: XP_023553581.1 (translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 131.3 bits (329), Expect = 3.3e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. NCBI nr
Match: XP_022991182.1 (translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita maxima] >XP_022991183.1 translation factor GUF1 homolog, mitochondrial isoform X1 [Cucurbita maxima]) HSP 1 Score: 131.3 bits (329), Expect = 3.3e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. NCBI nr
Match: XP_022964900.1 (translation factor GUF1 homolog, mitochondrial isoform X2 [Cucurbita moschata] >KAG7033160.1 Translation factor GUF1-like, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131.3 bits (329), Expect = 3.3e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy Swiss-Prot
Match: B9RUN8 (Translation factor GUF1 homolog, mitochondrial OS=Ricinus communis OX=3988 GN=RCOM_0855130 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.3e-29 Identity = 66/73 (90.41%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy Swiss-Prot
Match: C5Z3W1 (Translation factor GUF1 homolog, mitochondrial OS=Sorghum bicolor OX=4558 GN=Sb10g003070 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 4.8e-29 Identity = 64/73 (87.67%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy Swiss-Prot
Match: B8B2R1 (Translation factor GUF1 homolog, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=OsI_21607 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 6.2e-29 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy Swiss-Prot
Match: Q5VQ69 (Translation factor GUF1 homolog, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0144800 PE=3 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 6.2e-29 Identity = 63/73 (86.30%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy Swiss-Prot
Match: Q9FLE4 (Translation factor GUF1 homolog, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g39900 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 1.3e-26 Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy TrEMBL
Match: A0A6J1JL24 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487856 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy TrEMBL
Match: A0A6J1HK65 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111464855 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy TrEMBL
Match: A0A6J1JU42 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111487856 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy TrEMBL
Match: A0A6J1HM47 (Translation factor GUF1 homolog, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111464855 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 1.6e-27 Identity = 69/73 (94.52%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. ExPASy TrEMBL
Match: A0A1U7YWP0 (Translation factor GUF1 homolog, mitochondrial OS=Nelumbo nucifera OX=4432 GN=LOC104586753 PE=3 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 3.6e-27 Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 0
BLAST of Carg02260 vs. TAIR 10
Match: AT5G39900.1 (Small GTP-binding protein ) HSP 1 Score: 119.8 bits (299), Expect = 9.2e-28 Identity = 61/73 (83.56%), Postives = 66/73 (90.41%), Query Frame = 0
BLAST of Carg02260 vs. TAIR 10
Match: AT5G08650.1 (Small GTP-binding protein ) HSP 1 Score: 96.3 bits (238), Expect = 1.1e-20 Identity = 46/72 (63.89%), Postives = 59/72 (81.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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