
Carg02254 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACTATCACTTCATTGGCCGATTTCAGATTTTTTTTTTTTTCCTTTGGCCACCAACATATTCTCTCACTCTCTCTCTCTCTGTTTTTCCTTCTTTCTTTCGTCGTTTCTCTTCAACTTCGGGTGTACTCCTCACGAAACTAGGTTTCCGCCTCTAAAATGGTCGCCGAAAAGGGTAAAAAATCCAAGCCTGCCGACAAAGTCGAGGACGACGAAGCTGACCACGTTGACGTCGAGCTCGTCCATTATATCGAGAAGTTACAGGAGGTTCAAGACGAACTCGAGAAGGTCACCTCCCTTTTCACTTTTGTCTTACTTGAATAGGCTTTAGTCTGTGCATCCATTTTTGCGGTGTCACTCTATATTAGCGTTTTCTGCTGTTTAATTGTGTAGCTTCCCTTGCTGAACTTCAACGTCATTTTGATTTACGGATATGTTAGCTCAATTACCTAGGAGAATGGTTTTTTTTTTTCTATTGTTTCTTAACTTCAAATTTATTTTGCTTCTTTAACTGGTCTTGATTCTTACATATGTAGTGTGATGAGCGTAAGTTGGTTATTCAAACAGTATTAGTCCAGGGCTTGACTGGAAGGCGTAACTTGTGATTAGGGCTAATTTTCTTGGCTTTTGATTCTGAATTATACTTGTGTTACATTGCGGCAATCCTGGTTTGAATAATTTGGTCAAATTTTACCCTAACTTCTCCGTGCTAAAAGTGTAGGGTTATGATTGACTTGAACCGTTTCAATGATTTCTTAATACTCTTTATCCTGAAATTACATATTTTTCTTCAATTAAGGATGCTAATTACATGGACAACTAATTTGTTTTGGATGGAAAATAATTTGTGTTGGATGTGTCTTGGTTCGAATATCATGCTATACTACCACTTTATTTCAACCTTCCCTCAACCGTTTGAAAGTACTTCCGACTTCTATGCTCTGAGCTATATATCACTGCGTTTCCTCAATTTCTTGTATTTAGTTGGGAAGACTGGACTCTGCAAAAATTGCGAAGAATCAGGCTGAATAGCTCCATAATCGATCACTTCTTAAATGTTGCTTTTGATTTTTTGAAGGAAAGTCATAATTATATTACCACATTCACATTGTATATGCGATCTGAAATGGAGACAAGGATAGTAGATCTTATTGCCATTAAATGCCGCAATCTTATGACTCAATTTGATGCTATTTTGCAAGCATTATACCTTGTTTCAGATTCTACTTTTTTTATAATGGTCATGTTTTTCTTTTTCTTGTTTTGTTATGCATTTATGAGGTTGAATTCAATTCTCTCAAACTTCAATCATATCTCTTTCTCTTCTTCTTTGTTTCACGCTTTTTAAAATTGAGAAGATGCATGTAAAAACATTAAGTTGTAAGCCATGAAAATAGGGTCATAATGTCTTATCAAAAAAAGAAAAATATTGTCATAATGTGCAACAGAGAATATGTCAATGTTTACTTACCTTATTGTAATTAAATTTATAAGATTATATAATTGTGGGAGTATTTTCTATAAGTTCATGCTGGGCAATTATAACTTGCATTTAACTTTCCACTACATCAACGAGAAGTGTGTTTCCTCTCTCTCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTTGGATGGAAAAATTCCATTAAACTTGGCCGCTACTGAAATGAATCTTGATATTCTAATATTAACTGTCACATCTTTATATTTTAAGTCGTATAATGTTTGCAATATCCAGTTGTAGGTTTCACCTACCCCATCATGTTTCTTGTTGATGTTTTTTTTTTCTTTCTTTCATTTACCTTACTGAAGTGTTGCTTCATATCAAAACATTACATATATGTATGCAGACTCCAAGTATGGTTTTACAAAAAACATTTAATTTGGATACTTTTCTTTCTCCTTCTATTTTTATATTCTTTGCCTGCTTTCATCTTTTGCGAAATAATCAGGTTGTTTAGTGTGCTTACTTTTTTATTTCACTTATTGGGTAATAATATAGCTACAATTTTCTTTTTTCCGTTTTTTTATCTTTTAGGTAGAATATTTCCATGTGGGTTTATAACTATTAATGATCATTCCCAACTTGTATAGAAGTTCTTTCCAATTCAAGATTATAAGCGGTCCAGTGTTGGATCAAAGGATATGATTTCTTGTTCTCATTCTAGGTGGATAAAAAAGAGTATAAATCTCGAACTTGATAGGCAATATGTACAAGACATCCACCATGGCTATGTTCTGCCAATGCCTGATCTATATGGCAATAATGCAGTTTCTTATATATCATTCAATATTTAATAGATAGACTTGTACTTAGCCTTGAACCTTTGGATCCAACAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCGGCCTGTTTATGTGAAACGGAATGAGATTATCAAAACTATTCCGGACTTCTGGTTAACTGCCGTTAGTGCTCTGTTTATTTATTGACATTTTACCTATTATCTTTGTGAAGTGTACTTTTCTTTCCCCCTTTGATTCACATGTCCAATCTTGATTTATGCAGTTCTTGAGTCATCCTGCACTTTGTGATCTTTTGTCCGAAGAAGATCAGAAGGTTAGTTGCTTTAACCTAAGAATGGATATTTCTGCGAGTTTCTTATACTTCAGTTTATTTTGAAGTCCTAATTCAATGAGACTTTTGATTCTGTATTAATCAACTGCAAACAAGTATATACTCTCTTAATTGTTGGTCTCTTATTCTTGGTGCAGATCTTTAGGCATTTATATTCTCTTGAAGTGGAGGATCAGAAGGATGTAAAGATGGGGTATTCCATCATATTTGTGAGTTTCAGCTAACCTGTTTGACTTATACTGTGTCCGTCCATTTGCATCATTCATATCTTCCCTCAATTGCAGAATGTGATAATGATCTGTCACTAAACTGCTTAAAATTACAGAATTTCAACGAGAATCCTTATTTTGAAGATAGAAAGCTAGAGAAGACATATACGTTCTTTGAAGATGGAGCAATCAAAATTACTGGAACAACAATCCTGTGGAAGGATGGCTTGGTAACAGTTATTTCTATCTAAATAATAATTTATGTGGTTAGTTAATTCAGATTAATGAGTAATGATAATTTTTGAAGGGTGCATCAAATGGAGTTAACAGTGAGAAGAAAGGGAAGAAGCGACCGTTGGCCGAAGACAGGTGCTTCCTTATCCCTTATTTGATTCCATCCATCTTAAACAAAGTCATAGAACCTCAAAGTTTGTCAATGACCTTGGTTTCTCGAGTGAAAGCGTGCTTGAAATTATTGCAGTCTTAAAGCTCAAAATATTTTAAACAACTTTTTTCTTATTTTAAGAAGTTCATAATGAGTTAATTAATGGATGAAAACTTTCCTTGATTGAAATTGATTTAACGTTTAACACTGATGGAAAATGAGCTAGCCCATCTATTAATGCTTTTCCTTCCTAGATGGCGTGGGAAAGATTTTCTTTTAAGGTTAATAGGCCACAGTTACAATTATGTTAAAAAAGTAATCTCTCCCACTCAACCGCAGGGCTAAGCAGAAATATGAGAAAAGGGTGGTGTGCCATTTATTTGTTTTATATGTTTTTTATTTAATATTTGCCTAGAAATTTCTAGAGTTGGTTCACTCTATATCCATATTATTTAATAGTCTATCTTTCATCACTTCTATGTTAGAAGGGATTCTATTGGGCTTCTGTCTCTTTTGTAATTTCATACCATCAATGATAAGGGAATCCTAAGAGAGTCGCCGACTCCAACAACTGTCTATGTACGATTCATACTAGATCTGAATAGTTGTCCATCCTACCTTCTCTACATTCTTGACATCCCATCTTTGTCTAAGTAGATTCTTCCAATGGCATGTTTCGGCCTTCTCTCCCATTACTTGTCAAAAGTGAGCCAAAAATCTGGTGCAATGCTCCAAAAGAAAATTATTTAAAGCCATAATAAATGAGTAGTTTTCTGTCAACTGTAGTGTAGAATATATCATTTAAAAATTTCTAAATCCGTGTATTCAACATAAAGTTTAATTAGCATATTAAAAGGTATTTAAGGAAGAAACTTCTGATTTTCCATTACGTGCTGTTGTAATGTGTTACTATTATGCTATTACCCTATTACAATGACTTCTGCTTTCATATTCTCAATGATTTTTCTTTGACAAATAGAAAAAGTTAAGTTAGTAATACCTTTCTCCTCTTTTCTCTACCACATATGGTTTCTTGTTTTAATATAAATTCAGCATATTCACTCCCTATATTGCTCATCAATTTTGATGTATGCAGCTTCTTCAGTTGGTTTGGTGAAACCGAACAAAAAGATATCATGGAACTTCATGATGAAGTAAGTTTGAACATTTTTCTGCCCTGTAATTATATAAATGCCCAGCATGTCCTCTTGTTAAGTGTTAACTAGTACACTTCCCTTTCTAGTCATTTGAATTGCTGCTCCAGTTTGATATTACAGTTGTGCCAAAGCTAGATATAATAACTCGTCTAAGTTTCTCTTCTTGTAAGAACTCAATGCTTTGGGTTGTACTTACGTGCTTGGTTTCTTGACTTAAAATGCAGGTAGCTGAGATAATTAAAGAGGACCTGTGGCCCAATCCTTTGAAATATTTCAACAACGTAATCTCCATCTCCTTTGTTATCACTTTACCTATTCTTTGAGCCCTGTTTTTTTTTTTTTTTTTCAATTGTTCTGCTTGTGGAGATACCCCCTCCCCATCAAGCTCAGTTGCCGCGGTTGTTCTTTGTTTTTTTGTTTCCTTCCCCCACTTCGGAGTCTGGAATGCCAATCCTTCAAACAAGAAAAATGAGGGTTCTTCTGATTTCTTTTCAGGATATTGATGAAGATGAAGAGGAGTCTGATGGAGAAGATGAGGAGGAGGTAAACAAGATTAAATTTTACTTTCACCGTTGCACTCAAATATATGGATGATATTTTGGGTTCTGCCTTCTGCTTTCTTCCTATTCTTGAATCACCCGGCATACATCTTTTAGACAATCATTCCCGGGCCTTCATCCAGTTAACTAAAACCCATTCATTCTCACATAATTGATTATAAGATTCATATATACATGCATATAAGTTTTTGAAATATTGTACATGATCCAAGTTGCCTAGTGTTCTGCAACTGTATTGTTACTTTAACTGCCGTGCACATGTAGCCGAGCTAAAAATTCAGGAGTGATCATCGAACTTTGGATGATTAATGTGTAGGAAAATGGAGATGAAGACGATGATGATGGCGAAGAGTGAACCGTAAAGGACAACCCTTGTTAGACACATCCCGTTAGGTACCCTCCTTTTTTCCCCCTTGTTCCTGTTAGACACACCCCCT AAACTATCACTTCATTGGCCGATTTCAGATTTTTTTTTTTTTCCTTTGGCCACCAACATATTCTCTCACTCTCTCTCTCTCTGTTTTTCCTTCTTTCTTTCGTCGTTTCTCTTCAACTTCGGGTGTACTCCTCACGAAACTAGGTTTCCGCCTCTAAAATGGTCGCCGAAAAGGGTAAAAAATCCAAGCCTGCCGACAAAGTCGAGGACGACGAAGCTGACCACGTTGACGTCGAGCTCGTCCATTATATCGAGAAGTTACAGGAGGTTCAAGACGAACTCGAGAAGGTAGAATATTTCCATATAGACTTGTACTTAGCCTTGAACCTTTGGATCCAACAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCGGCCTGTTTATGTGAAACGGAATGAGATTATCAAAACTATTCCGGACTTCTGGTTAACTGCCTTCTTGAGTCATCCTGCACTTTGTGATCTTTTGTCCGAAGAAGATCAGAAGATCTTTAGGCATTTATATTCTCTTGAAGTGGAGGATCAGAAGGATAATTTCAACGAGAATCCTTATTTTGAAGATAGAAAGCTAGAGAAGACATATACGTTCTTTGAAGATGGAGCAATCAAAATTACTGGAACAACAATCCTGTGGAAGGATGGCTTGGGTGCATCAAATGGAGTTAACAGTGAGAAGAAAGGGAAGAAGCGACCGTTGGCCGAAGACAGCTTCTTCAGTTGGTTTGGTGAAACCGAACAAAAAGATATCATGGAACTTCATGATGAAGTAGCTGAGATAATTAAAGAGGACCTGTGGCCCAATCCTTTGAAATATTTCAACAACGATATTGATGAAGATGAAGAGGAGTCTGATGGAGAAGATGAGGAGGAGGAAAATGGAGATGAAGACGATGATGATGGCGAAGAGTGAACCGTAAAGGACAACCCTTGTTAGACACATCCCGTTAGGTACCCTCCTTTTTTCCCCCTTGTTCCTGTTAGACACACCCCCT ATGGTCGCCGAAAAGGGTAAAAAATCCAAGCCTGCCGACAAAGTCGAGGACGACGAAGCTGACCACGTTGACGTCGAGCTCGTCCATTATATCGAGAAGTTACAGGAGGTTCAAGACGAACTCGAGAAGGTAGAATATTTCCATATAGACTTGTACTTAGCCTTGAACCTTTGGATCCAACAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCGGCCTGTTTATGTGAAACGGAATGAGATTATCAAAACTATTCCGGACTTCTGGTTAACTGCCTTCTTGAGTCATCCTGCACTTTGTGATCTTTTGTCCGAAGAAGATCAGAAGATCTTTAGGCATTTATATTCTCTTGAAGTGGAGGATCAGAAGGATAATTTCAACGAGAATCCTTATTTTGAAGATAGAAAGCTAGAGAAGACATATACGTTCTTTGAAGATGGAGCAATCAAAATTACTGGAACAACAATCCTGTGGAAGGATGGCTTGGGTGCATCAAATGGAGTTAACAGTGAGAAGAAAGGGAAGAAGCGACCGTTGGCCGAAGACAGCTTCTTCAGTTGGTTTGGTGAAACCGAACAAAAAGATATCATGGAACTTCATGATGAAGTAGCTGAGATAATTAAAGAGGACCTGTGGCCCAATCCTTTGAAATATTTCAACAACGATATTGATGAAGATGAAGAGGAGTCTGATGGAGAAGATGAGGAGGAGGAAAATGGAGATGAAGACGATGATGATGGCGAAGAGTGA MVAEKGKKSKPADKVEDDEADHVDVELVHYIEKLQEVQDELEKVEYFHIDLYLALNLWIQQVNEEAGDKVLEVEQKYNEIRRPVYVKRNEIIKTIPDFWLTAFLSHPALCDLLSEEDQKIFRHLYSLEVEDQKDNFNENPYFEDRKLEKTYTFFEDGAIKITGTTILWKDGLGASNGVNSEKKGKKRPLAEDSFFSWFGETEQKDIMELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEESDGEDEEEENGDEDDDDGEE Homology
BLAST of Carg02254 vs. NCBI nr
Match: KAG7016142.1 (NAP1-related protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 502.3 bits (1292), Expect = 2.5e-138 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of Carg02254 vs. NCBI nr
Match: XP_023550589.1 (NAP1-related protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 446.8 bits (1148), Expect = 1.3e-121 Identity = 241/268 (89.93%), Postives = 241/268 (89.93%), Query Frame = 0
BLAST of Carg02254 vs. NCBI nr
Match: XP_022938966.1 (NAP1-related protein 2-like [Cucurbita moschata] >XP_022993662.1 NAP1-related protein 2-like [Cucurbita maxima] >KAG6578589.1 NAP1-related protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 446.8 bits (1148), Expect = 1.3e-121 Identity = 241/268 (89.93%), Postives = 241/268 (89.93%), Query Frame = 0
BLAST of Carg02254 vs. NCBI nr
Match: XP_022134471.1 (NAP1-related protein 2-like [Momordica charantia]) HSP 1 Score: 408.3 bits (1048), Expect = 5.0e-110 Identity = 221/268 (82.46%), Postives = 230/268 (85.82%), Query Frame = 0
BLAST of Carg02254 vs. NCBI nr
Match: XP_023533088.1 (NAP1-related protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6602492.1 NAP1-related protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 402.9 bits (1034), Expect = 2.1e-108 Identity = 221/269 (82.16%), Postives = 231/269 (85.87%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy Swiss-Prot
Match: Q8LC68 (NAP1-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=NRP2 PE=1 SV=2) HSP 1 Score: 270.4 bits (690), Expect = 2.1e-71 Identity = 156/271 (57.56%), Postives = 193/271 (71.22%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy Swiss-Prot
Match: Q9CA59 (NAP1-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1) HSP 1 Score: 267.7 bits (683), Expect = 1.4e-70 Identity = 156/271 (57.56%), Postives = 193/271 (71.22%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy Swiss-Prot
Match: Q69JW2 (NAP1-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0576700 PE=2 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 2.7e-66 Identity = 145/265 (54.72%), Postives = 191/265 (72.08%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy Swiss-Prot
Match: B8AEC1 (NAP1-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07785 PE=2 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 3.5e-66 Identity = 146/265 (55.09%), Postives = 190/265 (71.70%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy Swiss-Prot
Match: A2XU85 (NAP1-related protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.3 PE=3 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 4.4e-61 Identity = 143/278 (51.44%), Postives = 186/278 (66.91%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy TrEMBL
Match: A0A6J1JTH3 (NAP1-related protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489586 PE=3 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 6.1e-122 Identity = 241/268 (89.93%), Postives = 241/268 (89.93%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy TrEMBL
Match: A0A6J1FEK7 (NAP1-related protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445017 PE=3 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 6.1e-122 Identity = 241/268 (89.93%), Postives = 241/268 (89.93%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy TrEMBL
Match: A0A6J1BXW0 (NAP1-related protein 2-like OS=Momordica charantia OX=3673 GN=LOC111006708 PE=3 SV=1) HSP 1 Score: 408.3 bits (1048), Expect = 2.4e-110 Identity = 221/268 (82.46%), Postives = 230/268 (85.82%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy TrEMBL
Match: A0A6J1GVL4 (NAP1-related protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457879 PE=3 SV=1) HSP 1 Score: 400.2 bits (1027), Expect = 6.5e-108 Identity = 220/269 (81.78%), Postives = 230/269 (85.50%), Query Frame = 0
BLAST of Carg02254 vs. ExPASy TrEMBL
Match: A0A6J1GVT4 (NAP1-related protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457879 PE=3 SV=1) HSP 1 Score: 395.2 bits (1014), Expect = 2.1e-106 Identity = 215/268 (80.22%), Postives = 227/268 (84.70%), Query Frame = 0
BLAST of Carg02254 vs. TAIR 10
Match: AT1G74560.1 (NAP1-related protein 1 ) HSP 1 Score: 267.7 bits (683), Expect = 9.7e-72 Identity = 156/271 (57.56%), Postives = 193/271 (71.22%), Query Frame = 0
BLAST of Carg02254 vs. TAIR 10
Match: AT1G18800.1 (NAP1-related protein 2 ) HSP 1 Score: 265.8 bits (678), Expect = 3.7e-71 Identity = 156/272 (57.35%), Postives = 193/272 (70.96%), Query Frame = 0
BLAST of Carg02254 vs. TAIR 10
Match: AT1G74560.2 (NAP1-related protein 1 ) HSP 1 Score: 263.1 bits (671), Expect = 2.4e-70 Identity = 156/272 (57.35%), Postives = 193/272 (70.96%), Query Frame = 0
BLAST of Carg02254 vs. TAIR 10
Match: AT1G74560.3 (NAP1-related protein 1 ) HSP 1 Score: 245.4 bits (625), Expect = 5.2e-65 Identity = 133/234 (56.84%), Postives = 165/234 (70.51%), Query Frame = 0
BLAST of Carg02254 vs. TAIR 10
Match: AT2G19480.1 (nucleosome assembly protein 1;2 ) HSP 1 Score: 58.5 bits (140), Expect = 9.0e-09 Identity = 77/285 (27.02%), Postives = 138/285 (48.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|