Carg02242 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02242
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	KH domain-containing protein
Location	Carg_Chr15: 1428690 .. 1434251 (-)
RNA-Seq Expression	Carg02242
Synteny	Carg02242

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGAAAATCAGTTCCAAATATTTTCGTGGCAAAGTGCAATTTAGCGAAAGAAAAATCAAAACCCTAGACTCCGTCACAGAAAGTAAGTCCCGAGAATCAACGATCGTTCCTAAAACTCTCGATTGCGCGCAATCGGTCTTCGCCTCCCATTGCCCTCGTTTTTCTTCATTATCTGACAATTTTCAGGTTGATTCATTATCTTTAGCTTGTAAATTTCTTAATTTCTACGTCTTTCCCGTTCCGGATTTTGGATTCTGTTTTCGGTACCGATTGTTTCATTCGTTGTTGCTCAATTCTGCGATCCTTTTGCGTTATGGTTGTATTCATTGTCTCGCTGTAATTACGCGGGACTGATGGTGCGGACGAATCGAGATCTAAACTTGTTTTCTTATATCCTGTTGCAGTTGGTTAGATTTACTTTTTCCGAAATTGTTTTCCTGCTTTTCGCTAATTTAACAAGAGCACTGCTCGGGAACAAAGTTTCTTATAGACGTCGAAAGAAGGCTAGAAATTGTCGTTCCTGCAGAAAGAAAACGAATTTCTGTCATGAAAGTAGCGACCTACAATCTTGCGTAATTCCTTGAATATATTGTTTCCTATTTCCTAGAGTTTTGTTACAACCAGCCGTCTTGTTGTGCAGTATGGGGTTAACATTTAATACCGGTTTATGGTATAAACCTAGTATTAACTAATATATTTATGCTATAACTGGTTCTCTTTTCTTATTATTGGCCTAAAACTTGAGTTTTTTGAGATTTTTACTGAGCAAGCTGCTTCCTTAGATGTGTATTATTACTGATATTGGACCATTTTCTTGTGGTGTGTTTTACGCACATGTGATGTGTTTTACGCACATGTGATGTGTAGCATATATGTTCAAATTATGATTTAGCTGGGATATGTTATGGCTGTTTGTGTTCTCTGTTGTCTTTTAATTTCTGGTTTACTCACATCTTCCGTTTTTTTTATGTGTGTAGACAGATATAACCAGTTTTTAAGTTCATGGCTGGTCAGAGGAATAGTTACGGAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCACGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGACAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGGTAAGTGGATGGCTTTCACTAAATTTTATTGTTTGCATTTCTGAGTTTTTTTAAGTTCATGCCTTTTTTTCTGTTGTAGCATCTTAATTTAGTTGTGTTTCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTAGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGGTCTAATCTAAGCTTTTATAACTTTGTCTATTGTTGGCTGTGGATCATACTTCTGACAGTTTTATTGTATACTGTTTCAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCACACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGGTAGTGGCTGTTAATTGATTTATATTAATTTTCCTGTTATGATGAACTCTCCCTTGTATTCCGTATTGCTTGTGTTGCGTTCGGTTAATTGTATTGTTTTTCTGATTAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTGTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGGTACGTATATTAACCTTGACATGTCTAATTTTAGAGATGGTGAAAATGTATCCTTCTGCTTTTAGAAGGCTAATTTGCAGACAAGGTTTTGAAATTATTTCAGTTGTGCACCTTTAAGCGAAGTTTTTTTTTTTTTTTTTTTTTGCCATGATCATTTACCTATTATTGATCCAAATTTAATGCCGAGATTTCTAATTTGCAACTGAAGCCAAGCTTTTCCTTTGTAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGTAAATTATTCTTTTCTTCTTCATTTAGTGGTGTTAATCTTGAAAGGAAGAATGGTTGACTTTGCTCAGTCGATGCACTCATTTGTTATTTGGTCAAATTAGATGTACGTAGGTTTTGTTCCTGTATTTTTTTTTTTTTTTTTTTCAGAAATCTTGTAAATCTTTCTAAATGAAATGAAGTGGCTTGAAGTAGCTAATGTGTAGGTGGAGTAACTCCCCCTCCAAAAACAAAAAAAAAAAGGGGTAGTAATCATGTGTTCACTTTTTCTTCAGGGTTTCTGGACAAGGCAATGTTTCTCGGAGGAGAAACTATTCCTAGATTTTGGTGGTCATTATTTACAGGTATGCTATTTCGTCTCCCCTGGGGGCAGGATTAAAGAGAGAAAATACGGAAGAAAAGATAACTTTTACCTGTTTAGAACATTCGCCAACACACCACTGACAATTGATAGTTTGATAAAAATAAGCTATCCGGTCTCCCTCTGCTCAAAATTCTGATACAGTTATTTTCCCCTTGCCTTTCCCTTCCCATTAAAACAGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGACCAGATGAACCAGGGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGATGGACCATGCCTGAAGATCTTGTTGCTCTTAATTTTAACTCATCCACATACCAAGATGACCTTGCATAAGATCTTGAGCTCCTAATAACCTACTAGCCGAAATGCCTTGGTTTTTTGTTGTTTTTCCTTCTCAAAGATTGAACTATGAAACCGTGTTGACTTCCAGATTGGACAGATGTGGAGTTTTCGTTTTGTGTGGTTTACTGCTATAAGATTTGATTAGAACTCATGATGTGCACTCATTATCTCCTCAAAATTCTGTTTTATTTTTTCCTTTTTACCCTTGAGTGCACCCTATTCTGCATCGCCTCCTAAATGTGCTGGGATTAAATGTCGCACTCTGCTCTCTTGCACCCCCAATGGACATTCATTTTTATGGCGCTAAAACATTCCTACTTTACACTCTAATTTCTGAAAAAGGAAAAGGTTTGGTATCAAGCCTCAGGTTGGAACCTTTAGCGAGCTTAATAAGAAAAACCCTCGATGTTTCGGGTCTTGGCCTTGGGGTGGGTGCACCGGTGCCTTTGGGTTTGTGAGAGTGGGTCATCGGAAATATTGAGTTATAAAAAAAGAAGATGGTTTGAGAAGTAAGAAAACAAAAGGAAAGGGGTCAGTTTGATTTCTTATTCTTTTTGCTATATTCATTAAACACTGAATCTGGAAATACTATTTGCTTAAAGATGAATGCTGTTTTAGTTTATTATCCAGTAAGTGAAGAGACTATATTAAGGCCAGCCAGTGGCATTCTATACTTGACAGGGCAAGCTTGGTCCGCTATAGTTTGAAAATGCATTGGTTTGTTCATTGTTTATAGTGGTCAGGCAAGTTTTTGTAGGACTCATAATGCCTTGCAGTCTTTTTCGTTTCTTATATTATTTTGGATTTACAGTATTTTATCTTCAAAAGGATTTTTTCTGTCAACATAGCTATGAGGTCAAGCCGAAACATCTGTGCCAGGTTACTGGTACTGTTGGTACCTCAAAAAAGTACACCCTTCCTCTGTGCAAGGATATAACATTTTCTGACCCTTGAGATGGCCTGTGCTCTGAGTCTCTGGTCCTTGCATGGAAACTTGGCAGCTGGAAGTAATATTATTAGCTGTTGCTGAATGCAACTGGAGTTTTATACTCATTTTGACCTTGGAGTGTTTTAGAAAATGAATGTTTTAGGTAAACTGCTCGTACAGATTGTTAATGTTTGGAACGAAACTGAGTTCTTCGAGCTGTGAAGAGCTGTCTTCAAATCAAATGTGGCCTGACGACCCACAAACAATTCGAAGGTTAGTTTGGAGCTGATGGCAAGAATAGAGCAGGCTTGGACGAGAAGATTGAATTGATAGTTGAGGTAAATGGGGGAATGTTTTGTATTTTTCTTTTTAAATTTTATACAACTCTCGTAATGCTATTCTTTAAATCCATTTTAATGTACAAAATTGTGTGGCAGTTTGTGATGTGTATATGGCCGTGAAATCTATGTTTTTAAAAGGGAAGAAAATAAGTTAGCTCACCCTACAACAGTTGGACGTTATATTTTTATTTTCTCTGTGGTTGCAGCCTAATAATGTATAAAAATAAAAGCCTCTAGAATTCAAAACTTAAATCTACCTGTATCAAAGCAAGTGCTCCTACTCCCACTTGGGCATTTCAAAAAGCCCTAGTTGGATAACTCAGTTGGGTTTGTTGGCTGTTTTTTACGTTCTTATAAACTTTGAACGTGCTGGTCTTTTTATATGCATTTTTTTTTTTAATTATTATATGCATTTGTTTGAATTGTTCGTTCATTTTATTGTAGTTTATTTTTC

mRNA sequence

AAAGAAAATCAGTTCCAAATATTTTCGTGGCAAAGTGCAATTTAGCGAAAGAAAAATCAAAACCCTAGACTCCGTCACAGAAAGTAAGTCCCGAGAATCAACGATCGTTCCTAAAACTCTCGATTGCGCGCAATCGGTCTTCGCCTCCCATTGCCCTCGTTTTTCTTCATTATCTGACAATTTTCAGACAGATATAACCAGTTTTTAAGTTCATGGCTGGTCAGAGGAATAGTTACGGAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCACGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGACAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGCATCTTAATTTAGTTGTGTTTCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTAGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCACACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTGTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGGTTTCTGGACAAGGCAATGTTTCTCGGAGGAGAAACTATTCCTAGATTTTGGTGGTCATTATTTACAGGTATGCTATTTCGTCTCCCCTGGGGGCAGGATTAAAGAGAGAAAATACGGAAGAAAAGATAACTTTTACCTGTTTAGAACATTCGCCAACACACCACTGACAATTGATAGTTTGATAAAAATAAGCTATCCGGTCTCCCTCTGCTCAAAATTCTGATACAGTTATTTTCCCCTTGCCTTTCCCTTCCCATTAAAACAGCTGAGATTTATGAAGCCTGAGGCCAGCCTACTGCCTTAACCTGAAGACCAGATGAACCAGGGTTTGACATATTCATGGCCCACCTTGATGCTACCTTTAGATGGACCATGCCTGAAGATCTTGTTGCTCTTAATTTTAACTCATCCACATACCAAGATGACCTTGCATAAGATCTTGAGCTCCTAATAACCTACTAGCCGAAATGCCTTGGTTTTTTGTTGTTTTTCCTTCTCAAAGATTGAACTATGAAACCGTGTTGACTTCCAGATTGGACAGATGTGGAGTTTTCGTTTTGTGTGGTTTACTGCTATAAGATTTGATTAGAACTCATGATGTGCACTCATTATCTCCTCAAAATTCTGTTTTATTTTTTCCTTTTTACCCTTGAGTGCACCCTATTCTGCATCGCCTCCTAAATGTGCTGGGATTAAATGTCGCACTCTGCTCTCTTGCACCCCCAATGGACATTCATTTTTATGGCGCTAAAACATTCCTACTTTACACTCTAATTTCTGAAAAAGGAAAAGGTTTGGTATCAAGCCTCAGGTTGGAACCTTTAGCGAGCTTAATAAGAAAAACCCTCGATGTTTCGGGTCTTGGCCTTGGGGTGGGTGCACCGGTGCCTTTGGGTTTGTGAGAGTGGGTCATCGGAAATATTGAGTTATAAAAAAAGAAGATGGTTTGAGAAGTAAGAAAACAAAAGGAAAGGGGTCAGTTTGATTTCTTATTCTTTTTGCTATATTCATTAAACACTGAATCTGGAAATACTATTTGCTTAAAGATGAATGCTGTTTTAGTTTATTATCCAGTAAGTGAAGAGACTATATTAAGGCCAGCCAGTGGCATTCTATACTTGACAGGGCAAGCTTGGTCCGCTATAGTTTGAAAATGCATTGGTTTGTTCATTGTTTATAGTGGTCAGGCAAGTTTTTGTAGGACTCATAATGCCTTGCAGTCTTTTTCGTTTCTTATATTATTTTGGATTTACAGTATTTTATCTTCAAAAGGATTTTTTCTGTCAACATAGCTATGAGGTCAAGCCGAAACATCTGTGCCAGGTTACTGGTACTGTTGGTACCTCAAAAAAGTACACCCTTCCTCTGTGCAAGGATATAACATTTTCTGACCCTTGAGATGGCCTGTGCTCTGAGTCTCTGGTCCTTGCATGGAAACTTGGCAGCTGGAAGTAATATTATTAGCTGTTGCTGAATGCAACTGGAGTTTTATACTCATTTTGACCTTGGAGTGTTTTAGAAAATGAATGTTTTAGGTAAACTGCTCGTACAGATTGTTAATGTTTGGAACGAAACTGAGTTCTTCGAGCTGTGAAGAGCTGTCTTCAAATCAAATGTGGCCTGACGACCCACAAACAATTCGAAGGTTAGTTTGGAGCTGATGGCAAGAATAGAGCAGGCTTGGACGAGAAGATTGAATTGATAGTTGAGGTAAATGGGGGAATGTTTTGTATTTTTCTTTTTAAATTTTATACAACTCTCGTAATGCTATTCTTTAAATCCATTTTAATGTACAAAATTGTGTGGCAGTTTGTGATGTGTATATGGCCGTGAAATCTATGTTTTTAAAAGGGAAGAAAATAAGTTAGCTCACCCTACAACAGTTGGACGTTATATTTTTATTTTCTCTGTGGTTGCAGCCTAATAATGTATAAAAATAAAAGCCTCTAGAATTCAAAACTTAAATCTACCTGTATCAAAGCAAGTGCTCCTACTCCCACTTGGGCATTTCAAAAAGCCCTAGTTGGATAACTCAGTTGGGTTTGTTGGCTGTTTTTTACGTTCTTATAAACTTTGAACGTGCTGGTCTTTTTATATGCATTTTTTTTTTTAATTATTATATGCATTTGTTTGAATTGTTCGTTCATTTTATTGTAGTTTATTTTTC

Coding sequence (CDS)

ATGGCTGGTCAGAGGAATAGTTACGGAAAGCGTAATCGTTCTCAGTCTGATTATTCTGAAAATGGAGGGAACAAAAGAAGAAGTCACGGTGAGGACCGGGACCAGTTTATTATAGATCCAGAAGATACTGTTTACCGGTATTTGTGCCCTGTTAAAAAGATTGGAAGTGTTATTGGAAGGGGAGGTGAGATAGTGAAGCAGTTAAGGATAGATACTAAATCAAAGATTAGAATTGGAGAAACAGTGCCTGGATCTGATGAGCGTGTCATAACAATCTACAGCGCAAGCAATGAGGCTAATGCTTTGGAAGACAGTAGTGATTATAGTTCTCCAGCTCAGCAGGCTTTGTTCAAAGTCCACCATAGAGTTGTGGCCGATGACCTAATGGGCGAGGAATCTGAAGGAGGAAGTCACCAGGTTACAGCTAGACTTCTTGTACCCTCTGATCAAATTGGTTGTATTATTGGGAAAGGTGGGCAGATTGTCCAGAATATTCGCACTGAGACTGGGGCCCTGATTCGCATTCTTAAGGATGATCATTTACCCCGTTGTGCTCTGAGTTCTGATGAACTTGTGCAGCATCTTAATTTAGTTGTGTTTCAGATATCTGGTGAACCCCCGATTGTGGAGAAAGCCTTATACCAGATTGCATCTAGACTGCATGAAAATCCTTCACGATCTCAGCATCTACTTGCTTCTGCCATACCTGGTGTATATCCTTCTGGTGGTTCGCTTGTGGCTTCTACACATGGTGCTCCAATTATGGGTTTAGCTCCTTTGGTCAGTCCATATGGAGGTTATAAAGGGGACAGTGGTAATTGGTCCAGGTCTTTATATTCAGCTCCAAGGGAAGAATTATCTTCAAAAGAATTTTCTCTTCGATTGATATGTCCAACCGAAAACATTGGAGGTGTCATTGGCAAAGGTGGAGCTGTAATCAATCAGATTAGACAGGAGACTAAGGCTGCCATAAAAGTTGATAGTTCAGCTACTGAAGAAGATGATTGTTTGATAAATATATCATCAAAGGAGTTCTTTGAAGATTCATATTCTCCCACGCTGGAAGCTGCATTGCGCTTGCAACCAAGGTGCAGTGAGAAAGTAGAAAGAGATTCTGGAATTATTTCATTCACAACCCGTCTGCTTGTGCCTACCACACGAATTGGTTGCCTAATTGGTAAAGGTGGAGCTATCATTACCGAGTTGAGAAGGCTCACCAAAGCTAATATTCGAATACTGTCAAAGGAAAACCTCCCCAAGGTTGCCTTGGAAGATGATGAAATGGTGCAGATATCCGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTTCATATAGTGACCAGGTTGAGAGCCAACCTTTTTGATAGAGAAGGTGCTCTGTCAGCTGTTCTGCCTGTTCTGCCGTATCTTCCTCTATCAGCTGATGGTTCAGAAAGTCTATATGATGGTAGAGAAGGCAAAAGACATGGGCGTGGGCATTCTTATTCTAGTAGTTATGGGGGTTTCACGGATTTGGCTGCTGGTGATGGTTATGGAAGTTACAGTGGCTCACAGATTGGTGGTGGTGGTAGTGCTTATGGGGCCTATGGAAGCTTTTCCATGGGACGAAGTGGTAGTTCAGGGGTTTCTGGACAAGGCAATGTTTCTCGGAGGAGAAACTATTCCTAG

Protein sequence

MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSSGVSGQGNVSRRRNYS

Homology

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: KAG7016130.1 (KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1069.3 bits (2764), Expect = 1.1e-308
Identity = 555/555 (100.00%), Postives = 555/555 (100.00%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540
           YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS
Sbjct: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540

Query: 541 GVSGQGNVSRRRNYS 556
           GVSGQGNVSRRRNYS
Sbjct: 541 GVSGQGNVSRRRNYS 555

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_022938745.1 (KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938747.1 KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938748.1 KH domain-containing protein HEN4-like [Cucurbita moschata])

HSP 1 Score: 1038.5 bits (2684), Expect = 2.1e-299
Identity = 543/555 (97.84%), Postives = 545/555 (98.20%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540
           YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS
Sbjct: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540

Query: 541 GVSGQGNVSRRRNYS 556
           GVSGQ NVSRRRNYS
Sbjct: 541 GVSGQSNVSRRRNYS 547

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_023550244.1 (KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo] >XP_023550245.1 KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1031.6 bits (2666), Expect = 2.6e-297
Identity = 542/555 (97.66%), Postives = 544/555 (98.02%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESE GSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEVGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSAT EDDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSAT-EDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540
           YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS
Sbjct: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540

Query: 541 GVSGQGNVSRRRNYS 556
           GVSG GNVSRRRNYS
Sbjct: 541 GVSGHGNVSRRRNYS 546

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_022993579.1 (KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993580.1 KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993581.1 KH domain-containing protein HEN4-like [Cucurbita maxima])

HSP 1 Score: 1018.8 bits (2633), Expect = 1.7e-293
Identity = 534/553 (96.56%), Postives = 538/553 (97.29%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE NALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLM EESEG SHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMDEESEGVSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRL ENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLQENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLA LVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLASLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINI+SKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINITSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPL ADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLPADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540
           YDGREGKRHGRGHSYS+SYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS
Sbjct: 481 YDGREGKRHGRGHSYSNSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540

Query: 541 GVSGQGNVSRRRN 554
           GVSG GNVSRRRN
Sbjct: 541 GVSGHGNVSRRRN 545

[Close]

BLAST of Carg02242 vs. NCBI nr
Match: XP_038889775.1 (KH domain-containing protein HEN4 [Benincasa hispida])

HSP 1 Score: 977.6 bits (2526), Expect = 4.4e-281
Identity = 512/559 (91.59%), Postives = 531/559 (94.99%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYS SNE N+LE+SSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSVSNEINSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADDLM E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDLMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 181 LPRCALSSDELV--------QISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYS 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+A THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTE
Sbjct: 241 SGGSLMAPTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGD+DVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL
Sbjct: 421 VALEDDEMVQISGDIDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSL 480

Query: 481 -YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQI---GGGGSAYGAYGSFSMGR 540
            YDGREGKRHGRGHSYSS YGGF+DLA GDGYGSYSGSQI   GGGGSAYG+YGSFS+GR
Sbjct: 481 SYDGREGKRHGRGHSYSSGYGGFSDLAGGDGYGSYSGSQIGGGGGGGSAYGSYGSFSVGR 540

Query: 541 SGSSGVSGQGNVSRRRNYS 556
           SGSSGVSG G+VSRRRNYS
Sbjct: 541 SGSSGVSGHGSVSRRRNYS 551

[Close]

BLAST of Carg02242 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 1.0e-51
Identity = 157/471 (33.33%), Postives = 244/471 (51.80%), Query Frame = 0


Query: 9   GKRNRSQSDYSENGGNKR--RSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVK 68
           G  NR +      GGN R  +SH E           T YR LC   K G VIG+ G I+K
Sbjct: 39  GGNNRYRGGGGGGGGNGRPSKSHPETM-------ATTTYRILCHDAKAGGVIGKSGTIIK 98

Query: 69  QLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVVAD 128
            +R  T + I + E VPG  ER+I I  + N     +      SPAQ+ALF VH R++  
Sbjct: 99  SIRQHTGAWINVHELVPGDAERIIEI--SDNRRRDPDGRMPSFSPAQEALFSVHDRILES 158

Query: 129 DLM---------GEESEG----GSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALI 188
           +            EE  G    G  +V  RL+V    +GC++GKGG+I++ +R ET   I
Sbjct: 159 EAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHI 218

Query: 189 RIL-KDDHLPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLA 248
           RIL ++ +LPRC   S+E+V        QI GE   V+ AL  ++SRL E    SQH   
Sbjct: 219 RILPRESNLPRCVSLSEEIV--------QIVGELNAVKNALAIVSSRLRE----SQHRDR 278

Query: 249 SAIPGVYPSGGSLVASTHGAPIMGLAPLVS---PYGGYKGDSGNWSRSLYS--APR---- 308
           S   G   S     A+     +  L    S   P G ++ ++ +  +S Y+  AP     
Sbjct: 279 SNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNFSSRQSNYAEEAPAVPVG 338

Query: 309 EELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSK 368
           E + S+E   +++CP + I  V+G+   +I+ ++ E    ++V       D+ +I ISS+
Sbjct: 339 ENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSE 398

Query: 369 EFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELR 428
           E  +D + P  EA L +Q +  + +     +I  TTRLLVP+    CL GK G+ ++E+ 
Sbjct: 399 EAPDDPFFPAQEALLHIQTQIIDLIPDKDNLI--TTRLLVPSRDSICLEGKAGS-VSEIS 458

Query: 429 RLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 455
           RLT  +++IL++E +P+ A  +D ++QI+G++  A+EALV +   LR+++F
Sbjct: 459 RLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMF 485

[Close]

BLAST of Carg02242 vs. ExPASy Swiss-Prot
Match: P58223 (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 6.6e-46
Identity = 173/574 (30.14%), Postives = 281/574 (48.95%), Query Frame = 0


Query: 10  KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLR 69
           KR + Q + SE+  N++R    D+   I   E  VYR LCP+  +G VIG+ G+++  +R
Sbjct: 6   KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 65

Query: 70  IDTKSKIRIGETVPGSDERVITIYSA----SNEANALEDSSDYSSPAQQALFKVHHRVVA 129
            +TK+KI++ + + G  +RVITIY +      E    +  ++    AQ AL KV+  +VA
Sbjct: 66  HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 125

Query: 130 DDLMGEESEGGSH-----QVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDD- 189
            D   EE+   ++         RLLVP  Q   +IGK G+ ++ IR  T A ++++  D 
Sbjct: 126 SD---EENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDV 185

Query: 190 ----HLPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHE-NP-------SRS 249
               H+  CA+  D      N+VV  ISGEP  V++AL+ +++ +++ NP       S S
Sbjct: 186 SDPSHV--CAMEYD------NVVV--ISGEPESVKQALFAVSAIMYKINPRENIPLDSTS 245

Query: 250 QHLLASAI-------PGVYPSGGSLVASTH------GAPIMGLAPLVSPYGGYKGDSGN- 309
           Q + A+++         VYP  G      H      G P    A  VS + GY   + N 
Sbjct: 246 QDVPAASVIVPSDLSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANP 305

Query: 310 -----WSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDS 369
                 S  +         S+E   +++CP  NI  VIGKGG+ I +IR+ + + I+V+ 
Sbjct: 306 VPVFASSLPVTHGFGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVND 365

Query: 370 SATE--EDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTT 429
           S T+  +D+C+I +++ E  +D  S  +EA L LQ     +   D    +   +LLV + 
Sbjct: 366 SRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQ-----EYINDEDAENVKMQLLVSSK 425

Query: 430 RIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIV 489
            IGC+IGK G++I E+R+ T ANI I   +         D++V++SG++   ++AL+ IV
Sbjct: 426 VIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEVSSVRDALIQIV 485

Query: 490 TRLRANLFDREGALSAVLPVLPYLPLSADGSESLYDGREGKRHGRGHSYSSSYGGFTDLA 541
            RLR ++   + +++   P     P   D    L           G++  S        +
Sbjct: 486 LRLREDVLGDKDSVATRKP-----PARTDNCSFLSGSSNA-----GYTLPSFMSSMASTS 535

[Close]

BLAST of Carg02242 vs. ExPASy Swiss-Prot
Match: F4KDN0 (KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.9e-37
Identity = 165/625 (26.40%), Postives = 252/625 (40.32%), Query Frame = 0


Query: 10  KRNRSQSDYSENGGNKR--RSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQ 69
           KR+ +    S  G +KR    H +     ++      +R LCP+  +G+VIG+ G ++KQ
Sbjct: 12  KRSGAFDPGSGFGSSKRVKTHHTQLLSALVVPVGHAAFRLLCPLSHVGAVIGKSGNVIKQ 71

Query: 70  LRIDTKSKIRIGETVPGSDERVITIYS-----------ASNEANALEDSSDYS---SPAQ 129
           L+  T +KIR+ E   GS +RVITI +           A+N  NA  +  +     S AQ
Sbjct: 72  LQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKLGANNNGNAEGEKKEEEVEVSKAQ 131

Query: 130 QALFKVHHRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALI 189
            AL KV   + A        E  S  V  RLL  S   G +IGKGGQ+V +IR ETG  I
Sbjct: 132 GALIKVFELLAA--------EADSDTVVCRLLTESSHAGAVIGKGGQMVGSIRKETGCKI 191

Query: 190 RILKDDHLPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPS-------- 249
            I + ++LP CA + DE+V        ++ G    V+KAL  I+  L    S        
Sbjct: 192 SI-RIENLPICADTDDEMV--------EVEGNAIAVKKALVSISRCLQNCQSIDKVRMVG 251

Query: 250 ---------RSQH-----LLASAIP---------------GVYPSG-------------- 309
                     S H     ++  ++P                ++P G              
Sbjct: 252 NRPLEKEFQASLHRPIETIIQESLPRSVEVNPYDYRLRNDEIFPRGTVARANDVIPHDTL 311

Query: 310 --GSLVASTHGA------------------------------------------------ 369
               + A   GA                                                
Sbjct: 312 HLRRIEAVPQGALRMHIEADRQDVLRRHVEADRQDALRRRIDVVPQETLYMPSDVLRGDC 371

Query: 370 -----------------------PIMGLAPLVSPYGGY------------KGDSGNWSRS 429
                                    MG+     P   Y            +G S ++   
Sbjct: 372 FRQHRERDDSHDSLHRPFEMVPRDAMGMPFESFPRDAYGRPIETMTQETLRGQSADYLAH 431

Query: 430 LYSA-----------------------PRE-ELSSKEFSLRLICPTENIGGVIGKGGAVI 455
            YS                        P E E+ +++   +++C TEN GGVIG GG V+
Sbjct: 432 RYSTLDTHPHSFTTSASMANTATMKPPPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVV 491

[Close]

BLAST of Carg02242 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-18
Identity = 55/171 (32.16%), Postives = 93/171 (54.39%), Query Frame = 0


Query: 290 EFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDS 349
           E   R++ P + +G +IG+ G VI +I +ET+A IK+        +  + +S KE  E S
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245

Query: 350 YSPTLEAALRLQPRCSEKVERDSGII----SFTTRLLVPTTRIGCLIGKGGAIITELRRL 409
             P+++  LR+  R  + ++ ++         +TRLLVP ++ G LIGK G  +  ++  
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305

Query: 410 TKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDR 457
           +   +R+L  E+LP  AL+DD +V++ G+      AL  I + LR  L DR
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356

[Close]

BLAST of Carg02242 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.4e-16
Identity = 59/168 (35.12%), Postives = 91/168 (54.17%), Query Frame = 0


Query: 294 RLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPT 353
           R+I P   +G +IG+ G  I ++ +ET+A IKV        D ++ IS KE  E   SP 
Sbjct: 77  RMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPA 136

Query: 354 LEAALRLQPRCSEKVERD------SGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTK 413
           ++A LR+  R S   + D      +G +  + RLLV +T+   LIGK G++I  +   + 
Sbjct: 137 MDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSG 196

Query: 414 ANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFD 456
           A++RILS+E  P  A +D+ +V + G+     +AL  IV  LR  L D
Sbjct: 197 ASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVD 244

[Close]

BLAST of Carg02242 vs. ExPASy TrEMBL
Match: A0A6J1FJS6 (KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC111444879 PE=4 SV=1)

HSP 1 Score: 1038.5 bits (2684), Expect = 1.0e-299
Identity = 543/555 (97.84%), Postives = 545/555 (98.20%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSY KRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYAKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540
           YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS
Sbjct: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540

Query: 541 GVSGQGNVSRRRNYS 556
           GVSGQ NVSRRRNYS
Sbjct: 541 GVSGQSNVSRRRNYS 547

[Close]

BLAST of Carg02242 vs. ExPASy TrEMBL
Match: A0A6J1JYX2 (KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC111489532 PE=4 SV=1)

HSP 1 Score: 1018.8 bits (2633), Expect = 8.3e-294
Identity = 534/553 (96.56%), Postives = 538/553 (97.29%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE NALE+SSDYSSPAQQALFKVH
Sbjct: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNALEESSDYSSPAQQALFKVH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
           HRVVADDLM EESEG SHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH
Sbjct: 121 HRVVADDLMDEESEGVSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEPPIVEKALYQIASRL ENPSRSQHLLASAIPGVYP
Sbjct: 181 LPRCALSSDELV--------QISGEPPIVEKALYQIASRLQENPSRSQHLLASAIPGVYP 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSLVASTHGAPIMGLA LVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE
Sbjct: 241 SGGSLVASTHGAPIMGLASLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINI+SKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINITSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPL ADGSESL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLPADGSESL 480

Query: 481 YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540
           YDGREGKRHGRGHSYS+SYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS
Sbjct: 481 YDGREGKRHGRGHSYSNSYGGFTDLAAGDGYGSYSGSQIGGGGSAYGAYGSFSMGRSGSS 540

Query: 541 GVSGQGNVSRRRN 554
           GVSG GNVSRRRN
Sbjct: 541 GVSGHGNVSRRRN 545

[Close]

BLAST of Carg02242 vs. ExPASy TrEMBL
Match: A0A1S3C9E7 (KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498494 PE=4 SV=1)

HSP 1 Score: 977.6 bits (2526), Expect = 2.1e-281
Identity = 512/564 (90.78%), Postives = 531/564 (94.15%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLR+DTKSKIRIGETVPGSDERVITIYSASNE N+LE+SSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDFMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 181 LPRCALSSDELV--------QISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYS 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+ASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTE
Sbjct: 241 SGGSLMASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEAL+HIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSL 480

Query: 481 -YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQI--------GGGGSAYGAYGS 540
            YDGREGKRHGRGHSYSS YGGF DLA GDGYGSYSGSQI        GGGGSAYGAYG+
Sbjct: 481 SYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGSGGSGGGGGGGSAYGAYGN 540

Query: 541 FSMGRSGSSGVSGQGNVSRRRNYS 556
           FS+GRSGSSGVSG G+VSRRRNYS
Sbjct: 541 FSVGRSGSSGVSGHGSVSRRRNYS 556

[Close]

BLAST of Carg02242 vs. ExPASy TrEMBL
Match: A0A0A0KVM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1)

HSP 1 Score: 975.7 bits (2521), Expect = 8.1e-281
Identity = 513/565 (90.80%), Postives = 530/565 (93.81%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 61  MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 120

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE N+LE+SSDY SPAQ+ALFK+H
Sbjct: 121 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 180

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 181 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 240

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 241 LPRCALSSDELV--------QISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYS 300

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+A THGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTE
Sbjct: 301 SGGSLMAPTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTE 360

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 361 NIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRL 420

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKENLPK
Sbjct: 421 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 480

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL
Sbjct: 481 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSL 540

Query: 481 -YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGS---------AYGAYG 540
            YDGREGKRHGRGHSYSS YGGF DLA GDGYGSYSGSQIGGGGS         AYGAYG
Sbjct: 541 SYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGGGGSGGGGGGGGGAYGAYG 600

Query: 541 SFSMGRSGSSGVSGQGNVSRRRNYS 556
           +FS+GRSGSSGVSG G+VSRRRNYS
Sbjct: 601 NFSVGRSGSSGVSGHGSVSRRRNYS 617

[Close]

BLAST of Carg02242 vs. ExPASy TrEMBL
Match: A0A1S3CA00 (KH domain-containing protein At4g18375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498494 PE=4 SV=1)

HSP 1 Score: 974.9 bits (2519), Expect = 1.4e-280
Identity = 511/564 (90.60%), Postives = 530/564 (93.97%), Query Frame = 0


Query: 1   MAGQRNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGR 60
           MAGQRNSYGKRN SQSDYSENGGNKRRSHGEDRDQF+ID EDTVYRYLCPVKKIGSVIGR
Sbjct: 1   MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60

Query: 61  GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVH 120
           GGEIVKQLR+DTKSKIRIGETVPGSDERVITIYSASNE N+LE+SSDY SPAQ+ALFK+H
Sbjct: 61  GGEIVKQLRVDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120

Query: 121 HRVVADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDH 180
            RVVADD M E+SEGG HQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGA +RILKDDH
Sbjct: 121 DRVVADDFMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180

Query: 181 LPRCALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYP 240
           LPRCALSSDELV        QISGEP IV+KALYQIASRLH+NPSRSQHLLASAIPGVY 
Sbjct: 181 LPRCALSSDELV--------QISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYS 240

Query: 241 SGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTE 300
           SGGSL+ASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPRE+LSSKEFSLRLICPTE
Sbjct: 241 SGGSLMASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREDLSSKEFSLRLICPTE 300

Query: 301 NIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRL 360
           NIGGVIGKGGA+INQIRQETKAAIKVDSSATE DDCLINISSKEFFEDSYSPTLEAALRL
Sbjct: 301 NIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRL 360

Query: 361 QPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPK 420
           QPRCSEKVERDSGIISFTTRLLVPT+RIGCLIGKGGAIITELRRLTKANIRILSKEN PK
Sbjct: 361 QPRCSEKVERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENPPK 420

Query: 421 VALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL 480
           VALEDDEMVQISGDLDVAKEAL+HIVTRLRANLFDREGALSAVLPVLPYLPLSADGS+SL
Sbjct: 421 VALEDDEMVQISGDLDVAKEALIHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSL 480

Query: 481 -YDGREGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQI--------GGGGSAYGAYGS 540
            YDGREGKRHGRGHSYSS YGGF DLA GDGYGSYSGSQI        GGGGSAYGAYG+
Sbjct: 481 SYDGREGKRHGRGHSYSSGYGGFNDLAGGDGYGSYSGSQIGSGGSGGGGGGGSAYGAYGN 540

Query: 541 FSMGRSGSSGVSGQGNVSRRRNYS 556
           FS+GRSGSSGVSG G+VSRRRNYS
Sbjct: 541 FSVGRSGSSGVSGHGSVSRRRNYS 556

[Close]

BLAST of Carg02242 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 659.1 bits (1699), Expect = 3.2e-189
Identity = 351/552 (63.59%), Postives = 435/552 (78.80%), Query Frame = 0


Query: 5   RNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           R+S+ KR+R QSDY +NGG+KRR  G+DRD  +ID +DTV+RYLCPVKKIGSVIGRGG+I
Sbjct: 12  RDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDI 71

Query: 65  VKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVV 124
           VKQLR DT+SKIRIGE +PG DERVITIYS S+E NA  D     SPAQ ALF++H RVV
Sbjct: 72  VKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV 131

Query: 125 ADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRC 184
           ADD   E+S  G  QVTA+LLVPSDQIGCI+G+GGQIVQNIR+ETGA IRI+KD ++P C
Sbjct: 132 ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLC 191

Query: 185 ALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGS 244
           AL+SDEL+        QISGE  IV+KAL QIASRLHENPSRSQ+LL+S+  G YP+ GS
Sbjct: 192 ALNSDELI--------QISGEVLIVKKALLQIASRLHENPSRSQNLLSSS--GGYPA-GS 251

Query: 245 LVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGG 304
           L++   G  ++GLAPL+  YG    D+G+WSR LY  PR +  + EF +RL+ P ENI  
Sbjct: 252 LMSHAGGPRLVGLAPLMGSYG---RDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIAS 311

Query: 305 VIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRC 364
           VIGKGGA+INQ+RQET+A IKVDSS TE +DCLI IS++E FED+YSPT+EA +RLQP+C
Sbjct: 312 VIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKC 371

Query: 365 SEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALE 424
           S+KVERDSG++SFTTRLLVP++RIGC++GKGGAIITE+RR+TKANIRIL KENLPKVA +
Sbjct: 372 SDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASD 431

Query: 425 DDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDG 484
           DDEMVQISG+LDVAKEAL+ I +RLRAN+FDREGA+SA++PVLPY+P++ D  +   YD 
Sbjct: 432 DDEMVQISGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDS 491

Query: 485 REGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSA-YGAYGSFSMGRSGSSGV 544
           R+ +R  RG+ Y   YG  +   + +GY  Y G+ +GG  S  YG YG ++ GRS SSG+
Sbjct: 492 RDSRRLERGNPYPGGYG--SSGVSAEGYSPY-GAPVGGSSSTPYGVYGGYASGRSSSSGL 546

Query: 545 SGQGNVSRRRNY 555
           S   +  RRRNY
Sbjct: 552 SSHSSTYRRRNY 546

[Close]

BLAST of Carg02242 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 659.1 bits (1699), Expect = 3.2e-189
Identity = 351/552 (63.59%), Postives = 435/552 (78.80%), Query Frame = 0


Query: 5   RNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           R+S+ KR+R QSDY +NGG+KRR  G+DRD  +ID +DTV+RYLCPVKKIGSVIGRGG+I
Sbjct: 12  RDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDI 71

Query: 65  VKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVV 124
           VKQLR DT+SKIRIGE +PG DERVITIYS S+E NA  D     SPAQ ALF++H RVV
Sbjct: 72  VKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRVV 131

Query: 125 ADDLMGEESEGGSHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRC 184
           ADD   E+S  G  QVTA+LLVPSDQIGCI+G+GGQIVQNIR+ETGA IRI+KD ++P C
Sbjct: 132 ADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLC 191

Query: 185 ALSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGS 244
           AL+SDEL+        QISGE  IV+KAL QIASRLHENPSRSQ+LL+S+  G YP+ GS
Sbjct: 192 ALNSDELI--------QISGEVLIVKKALLQIASRLHENPSRSQNLLSSS--GGYPA-GS 251

Query: 245 LVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGG 304
           L++   G  ++GLAPL+  YG    D+G+WSR LY  PR +  + EF +RL+ P ENI  
Sbjct: 252 LMSHAGGPRLVGLAPLMGSYG---RDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIAS 311

Query: 305 VIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRC 364
           VIGKGGA+INQ+RQET+A IKVDSS TE +DCLI IS++E FED+YSPT+EA +RLQP+C
Sbjct: 312 VIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKC 371

Query: 365 SEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALE 424
           S+KVERDSG++SFTTRLLVP++RIGC++GKGGAIITE+RR+TKANIRIL KENLPKVA +
Sbjct: 372 SDKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASD 431

Query: 425 DDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSESL-YDG 484
           DDEMVQISG+LDVAKEAL+ I +RLRAN+FDREGA+SA++PVLPY+P++ D  +   YD 
Sbjct: 432 DDEMVQISGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDS 491

Query: 485 REGKRHGRGHSYSSSYGGFTDLAAGDGYGSYSGSQIGGGGSA-YGAYGSFSMGRSGSSGV 544
           R+ +R  RG+ Y   YG  +   + +GY  Y G+ +GG  S  YG YG ++ GRS SSG+
Sbjct: 492 RDSRRLERGNPYPGGYG--SSGVSAEGYSPY-GAPVGGSSSTPYGVYGGYASGRSSSSGL 546

Query: 545 SGQGNVSRRRNY 555
           S   +  RRRNY
Sbjct: 552 SSHSSTYRRRNY 546

[Close]

BLAST of Carg02242 vs. TAIR 10
Match: AT1G14170.3 (RNA-binding KH domain-containing protein )

HSP 1 Score: 451.4 bits (1160), Expect = 1.0e-126
Identity = 250/489 (51.12%), Postives = 335/489 (68.51%), Query Frame = 0


Query: 5   RNSYGKRNRSQSDYSENGGNKRRSHGEDRDQFIIDPEDTVYRYLCPVKKIGSVIGRGGEI 64
           RN +GKR+  QS+++ NGG+KRR+  ++ DQ +I  EDTVYRYLCPVKK GS+IG+GGEI
Sbjct: 6   RNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEI 65

Query: 65  VKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANALEDSSDYSSPAQQALFKVHHRVV 124
            KQ+R +TKS +RI E +PG +ERV+T+YS + E N   D  +   PA  ALFKVH  VV
Sbjct: 66  AKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125

Query: 125 A----DDLMGEESEGGSHQ-VTARLLVPSDQIGCIIGKGGQIVQNIRTETGALIRILKDD 184
           A    DD   ++++ G  Q VT R+LVPSDQIGC+IGKGGQ++QN+R +T A IR++K D
Sbjct: 126 ADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIK-D 185

Query: 185 HLPRCA--LSSDELVQHLNLVVFQISGEPPIVEKALYQIASRLHENPSRSQHLLASAIPG 244
           HLP CA  LS DEL+         I GEP +V +ALYQ+AS LH+NPSR QHLL S+   
Sbjct: 186 HLPACALTLSHDELL--------LIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSS 245

Query: 245 VYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNWSRSLYSAPREELSSKEFSLRLIC 304
                G+++ S         A L S            S   Y+  R+   ++EF +  IC
Sbjct: 246 SMHQPGAMLMS---------AALTS------------SHRNYAVRRDIADAREFCVCFIC 305

Query: 305 PTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEEDDCLINISSKEFFEDSYSPTLEAA 364
           P EN+GGVIGKGG  INQIRQET A I+V++S T++DDC+I ISSKEF+ED  SP + AA
Sbjct: 306 PAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAA 365

Query: 365 LRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGKGGAIITELRRLTKANIRILSKEN 424
           +RLQ RCSEKV +D+  ++ +TRLLV +++IGCLIGKGGA+I+E+R +T+ANIRIL KE+
Sbjct: 366 IRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKED 425

Query: 425 LPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLP-LSADG 484
           +PK+A ED+EMVQI+G  D A +AL  ++ RLRAN FD +  L  +    PY+P ++   
Sbjct: 426 VPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESS 463

Query: 485 SESLYDGRE 486
           S+S Y  R+
Sbjct: 486 SKSKYAKRD 463

[Close]

BLAST of Carg02242 vs. TAIR 10
Match: AT1G14170.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 430.3 bits (1105), Expect = 2.4e-120
Identity = 237/460 (51.52%), Postives = 313/460 (68.04%), Query Frame = 0


Query: 34  DQFIIDPEDTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIY 93
           DQ +I  EDTVYRYLCPVKK GS+IG+GGEI KQ+R +TKS +RI E +PG +ERV+T+Y
Sbjct: 10  DQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMY 69

Query: 94  SASNEANALEDSSDYSSPAQQALFKVHHRVVA----DDLMGEESEGGSHQ-VTARLLVPS 153
           S + E N   D  +   PA  ALFKVH  VVA    DD   ++++ G  Q VT R+LVPS
Sbjct: 70  STNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPS 129

Query: 154 DQIGCIIGKGGQIVQNIRTETGALIRILKDDHLPRCA--LSSDELVQHLNLVVFQISGEP 213
           DQIGC+IGKGGQ++QN+R +T A IR++K DHLP CA  LS DEL+         I GEP
Sbjct: 130 DQIGCVIGKGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELL--------LIIGEP 189

Query: 214 PIVEKALYQIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGG 273
            +V +ALYQ+AS LH+NPSR QHLL S+        G+++ S         A L S    
Sbjct: 190 LVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMS---------AALTS---- 249

Query: 274 YKGDSGNWSRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKV 333
                   S   Y+  R+   ++EF +  ICP EN+GGVIGKGG  INQIRQET A I+V
Sbjct: 250 --------SHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRV 309

Query: 334 DSSATEEDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTT 393
           ++S T++DDC+I ISSKEF+ED  SP + AA+RLQ RCSEKV +D+  ++ +TRLLV ++
Sbjct: 310 NTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSS 369

Query: 394 RIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIV 453
           +IGCLIGKGGA+I+E+R +T+ANIRIL KE++PK+A ED+EMVQI+G  D A +AL  ++
Sbjct: 370 QIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVI 429

Query: 454 TRLRANLFDREGALSAVLPVLPYLP-LSADGSESLYDGRE 486
            RLRAN FD +  L  +    PY+P ++   S+S Y  R+
Sbjct: 430 LRLRANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYAKRD 438

[Close]

BLAST of Carg02242 vs. TAIR 10
Match: AT1G14170.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 423.3 bits (1087), Expect = 3.0e-118
Identity = 233/452 (51.55%), Postives = 308/452 (68.14%), Query Frame = 0


Query: 42  DTVYRYLCPVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNEANA 101
           DTVYRYLCPVKK GS+IG+GGEI KQ+R +TKS +RI E +PG +ERV+T+YS + E N 
Sbjct: 10  DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNH 69

Query: 102 LEDSSDYSSPAQQALFKVHHRVVA----DDLMGEESEGGSHQ-VTARLLVPSDQIGCIIG 161
             D  +   PA  ALFKVH  VVA    DD   ++++ G  Q VT R+LVPSDQIGC+IG
Sbjct: 70  FGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIG 129

Query: 162 KGGQIVQNIRTETGALIRILKDDHLPRCA--LSSDELVQHLNLVVFQISGEPPIVEKALY 221
           KGGQ++QN+R +T A IR++K DHLP CA  LS DEL+         I GEP +V +ALY
Sbjct: 130 KGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELL--------LIIGEPLVVREALY 189

Query: 222 QIASRLHENPSRSQHLLASAIPGVYPSGGSLVASTHGAPIMGLAPLVSPYGGYKGDSGNW 281
           Q+AS LH+NPSR QHLL S+        G+++ S         A L S            
Sbjct: 190 QVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMS---------AALTS------------ 249

Query: 282 SRSLYSAPREELSSKEFSLRLICPTENIGGVIGKGGAVINQIRQETKAAIKVDSSATEED 341
           S   Y+  R+   ++EF +  ICP EN+GGVIGKGG  INQIRQET A I+V++S T++D
Sbjct: 250 SHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDD 309

Query: 342 DCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTTRIGCLIGK 401
           DC+I ISSKEF+ED  SP + AA+RLQ RCSEKV +D+  ++ +TRLLV +++IGCLIGK
Sbjct: 310 DCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGK 369

Query: 402 GGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRLRANLF 461
           GGA+I+E+R +T+ANIRIL KE++PK+A ED+EMVQI+G  D A +AL  ++ RLRAN F
Sbjct: 370 GGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSF 429

Query: 462 DREGALSAVLPVLPYLP-LSADGSESLYDGRE 486
           D +  L  +    PY+P ++   S+S Y  R+
Sbjct: 430 DMDHGLVLLPTSFPYIPQVTESSSKSKYAKRD 430

The following BLAST results are available for this feature:

BLAST of Carg02242 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016130.1	1.1e-308	100.00	KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022938745.1	2.1e-299	97.84	KH domain-containing protein HEN4-like [Cucurbita moschata] >XP_022938747.1 KH d...	[more]
XP_023550244.1	2.6e-297	97.66	KH domain-containing protein HEN4-like [Cucurbita pepo subsp. pepo] >XP_02355024...	[more]
XP_022993579.1	1.7e-293	96.56	KH domain-containing protein HEN4-like [Cucurbita maxima] >XP_022993580.1 KH dom...	[more]
XP_038889775.1	4.4e-281	91.59	KH domain-containing protein HEN4 [Benincasa hispida]	[more]

BLAST of Carg02242 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4B1	1.0e-51	33.33	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
P58223	6.6e-46	30.14	KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18...	[more]
F4KDN0	1.9e-37	26.40	KH domain-containing protein HEN4 OS=Arabidopsis thaliana OX=3702 GN=HEN4 PE=1 S...	[more]
Q9SR13	1.2e-18	32.16	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q9SZH4	2.4e-16	35.12	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg02242 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FJS6	1.0e-299	97.84	KH domain-containing protein HEN4-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1JYX2	8.3e-294	96.56	KH domain-containing protein HEN4-like OS=Cucurbita maxima OX=3661 GN=LOC1114895...	[more]
A0A1S3C9E7	2.1e-281	90.78	KH domain-containing protein At4g18375 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KVM1	8.1e-281	90.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636640 PE=4 SV=1	[more]
A0A1S3CA00	1.4e-280	90.60	KH domain-containing protein At4g18375 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]

BLAST of Carg02242 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15270.2	3.2e-189	63.59	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	3.2e-189	63.59	RNA-binding KH domain-containing protein	[more]
AT1G14170.3	1.0e-126	51.12	RNA-binding KH domain-containing protein	[more]
AT1G14170.1	2.4e-120	51.52	RNA-binding KH domain-containing protein	[more]
AT1G14170.2	3.0e-118	51.55	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 289..362 e-value: 1.6E-4 score: 31.1 coord: 41..113 e-value: 9.8E-6 score: 35.1 coord: 375..450 e-value: 1.8E-11 score: 54.1 coord: 138..221 e-value: 7.7E-12 score: 55.3
None	No IPR available	GENE3D	3.30.310.210		coord: 41..228 e-value: 9.6E-34 score: 118.4 coord: 290..452 e-value: 1.7E-31 score: 111.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 536..555
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	PANTHER	PTHR10288:SF274	PROTEIN BTR1-LIKE	coord: 9..490
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..490
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 139..216 score: 16.206224
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 376..445 score: 15.78696
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 42..109 score: 12.432848
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 290..361 score: 13.292338
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 44..104 e-value: 2.68021E-16 score: 71.3535
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 292..343 e-value: 3.6701E-13 score: 62.4939
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 141..217 e-value: 9.17321E-18 score: 75.5907
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 378..446 e-value: 7.92473E-18 score: 75.5907
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 378..445 e-value: 2.0E-13 score: 49.9 coord: 141..217 e-value: 6.1E-13 score: 48.4 coord: 45..98 e-value: 8.9E-10 score: 38.3 coord: 293..342 e-value: 1.1E-10 score: 41.2
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 38..97
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 135..224
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 376..450
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 286..342

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02242-RA	Carg02242-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding