Carg02228 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02228
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Membrane-anchored ubiquitin-fold protein
Location	Carg_Chr15: 1363058 .. 1363960 (+)
RNA-Seq Expression	Carg02228
Synteny	Carg02228

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTGTTTTTGCAGAATCCAAATTTTCCGTGATTGATTGAAGAGGCGAGCCAATATGGGTGGAGTGGAAGATCAATTGGATATCAAGTTTCGGTTGGACGATGGGTCTGATATCGGTCCCAAAACCTTCCCTGCTGCCACAACCATAGCAACCTTGAAAGAAAGCATTATTGCTCAATGGCCAAGAGGTGTGCGAAATTTGAACATCTTTTCCTTTACTTGAATTCCCATCCTACGCTGATGTTGTATTTGGTTGAGCAGGAAAGGAGAACGGTCCAAGAACAGTAAAGGATGTGAAGCTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACAGTGAATGATTGCAGCAGCCAATTATATGACATTCCTGGTAGTGTTACAACCATGCACGTTGTTATCCAACCTCCAAGTTTGGAGAAAGGTATGATCTGTTCTATAGAATGAATATTGCACTTTGATTGCTTGACAAAGATAGAACTTGAAACCATTCAGCACTGTTTTGTTTGGCTGAGCAGAGAAGGAAGGTAGCGACCCATCAACACAAAACAAGTGTGTTTGTGCTATACTATAAAGATGGGGAAGAGGAGGATGGGGTATTTATGAAGATAAGCCAGTTTGTAGAACAGATCTATTATGAATAGCTTCATTTGTTGTTTAGATTGATTTTGTGGAACCCTTCTGCAATCTCAGATGTTTGTGGTGAAAGGTTTTATATACTTAAAAAGTTGCAGTTACAAATGGTATTAGAGTGACGTCGAGCGGTGTGCCAGTGAGGATGCTAAGCTCCAAAGAGGGTAGACACCAGACAGTGTGTTAGTGAGGACGCTAAGCTCCAAAGAGGGTAGACACCAGACAGTGTGTCAGTGAGGACACTAGACCTTAAAGGGGTGGATTGTGA

mRNA sequence

TCTCTGTTTTTGCAGAATCCAAATTTTCCGTGATTGATTGAAGAGGCGAGCCAATATGGGTGGAGTGGAAGATCAATTGGATATCAAGTTTCGGTTGGACGATGGGTCTGATATCGGTCCCAAAACCTTCCCTGCTGCCACAACCATAGCAACCTTGAAAGAAAGCATTATTGCTCAATGGCCAAGAGGAAAGGAGAACGGTCCAAGAACAGTAAAGGATGTGAAGCTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACAGTGAATGATTGCAGCAGCCAATTATATGACATTCCTGGTAGTGTTACAACCATGCACGTTGTTATCCAACCTCCAAGTTTGGAGAAAGGTATGATCTGTTCTATAGAATGAATATTGCACTTTGATTGCTTGACAAAGATAGAACTTGAAACCATTCAGCACTGTTTTGTTTGGCTGAGCAGAGAAGGAAGGTAGCGACCCATCAACACAAAACAAGTGTGTTTGTGCTATACTATAAAGATGGGGAAGAGGAGGATGGGGTATTTATGAAGATAAGCCAGTTTGTAGAACAGATCTATTATGAATAGCTTCATTTGTTGTTTAGATTGATTTTGTGGAACCCTTCTGCAATCTCAGATGTTTGTGGTGAAAGGTTTTATATACTTAAAAAGTTGCAGTTACAAATGGTATTAGAGTGACGTCGAGCGGTGTGCCAGTGAGGATGCTAAGCTCCAAAGAGGGTAGACACCAGACAGTGTGTTAGTGAGGACGCTAAGCTCCAAAGAGGGTAGACACCAGACAGTGTGTCAGTGAGGACACTAGACCTTAAAGGGGTGGATTGTGA

Coding sequence (CDS)

ATGGGTGGAGTGGAAGATCAATTGGATATCAAGTTTCGGTTGGACGATGGGTCTGATATCGGTCCCAAAACCTTCCCTGCTGCCACAACCATAGCAACCTTGAAAGAAAGCATTATTGCTCAATGGCCAAGAGGAAAGGAGAACGGTCCAAGAACAGTAAAGGATGTGAAGCTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACAGTGAATGATTGCAGCAGCCAATTATATGACATTCCTGGTAGTGTTACAACCATGCACGTTGTTATCCAACCTCCAAGTTTGGAGAAAGGTATGATCTGTTCTATAGAATGA

Protein sequence

MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLISAGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE

Homology

[Close]

BLAST of Carg02228 vs. NCBI nr
Match: KAG7016116.1 (Membrane-anchored ubiquitin-fold protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 217.6 bits (553), Expect = 5.1e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS
Sbjct: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE 107
           AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE
Sbjct: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE 106

[Close]

BLAST of Carg02228 vs. NCBI nr
Match: XP_022938992.1 (membrane-anchored ubiquitin-fold protein 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 210.3 bits (534), Expect = 8.1e-51
Identity = 101/106 (95.28%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGVEDQLDIKFRL+DGSDIGPKTFPAATTIATLK+SI+AQWPRGKENGPRTVKDV+LIS
Sbjct: 1   MGGVEDQLDIKFRLNDGSDIGPKTFPAATTIATLKQSILAQWPRGKENGPRTVKDVQLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE 107
           AGKILENNRTVNDC SQLYDIPGSVTTMHVVIQPPSLEKGMICSIE
Sbjct: 61  AGKILENNRTVNDCRSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE 106

[Close]

BLAST of Carg02228 vs. NCBI nr
Match: KAG6578556.1 (Membrane-anchored ubiquitin-fold protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.4 bits (511), Expect = 3.8e-48
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGVEDQLDIKFRL+DGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS
Sbjct: 1   MGGVEDQLDIKFRLNDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK
Sbjct: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 99

[Close]

BLAST of Carg02228 vs. NCBI nr
Match: XP_022938993.1 (membrane-anchored ubiquitin-fold protein 2-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 196.1 bits (497), Expect = 1.6e-46
Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGVEDQLDIKFRL+DGSDIGPKTFPAATTIATLK+SI+AQWPRGKENGPRTVKDV+LIS
Sbjct: 1   MGGVEDQLDIKFRLNDGSDIGPKTFPAATTIATLKQSILAQWPRGKENGPRTVKDVQLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRTVNDC SQLYDIPGSVTTMHVVIQPPSLEK
Sbjct: 61  AGKILENNRTVNDCRSQLYDIPGSVTTMHVVIQPPSLEK 99

[Close]

BLAST of Carg02228 vs. NCBI nr
Match: XP_022993686.1 (membrane-anchored ubiquitin-fold protein 2-like [Cucurbita maxima] >XP_022993687.1 membrane-anchored ubiquitin-fold protein 2-like [Cucurbita maxima])

HSP 1 Score: 191.4 bits (485), Expect = 3.9e-45
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGV DQLDIKFRL+DGSDIGPKTFPAAT+IATLKESI+AQWPR KENGPRTVKDVKLIS
Sbjct: 1   MGGVGDQLDIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPREKENGPRTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRTVNDC SQLYDIPGSVTTMHVVIQPPSLEK
Sbjct: 61  AGKILENNRTVNDCRSQLYDIPGSVTTMHVVIQPPSLEK 99

[Close]

BLAST of Carg02228 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.2e-35
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M  V+DQL+IKFRL+DGSDIGPK FP ATT+ATLKE+++AQWPR KENGP+TVKDVKLIS
Sbjct: 1   MAEVKDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AG+ILENN+TV DC S + +  G+VTTMHV+IQ    EK
Sbjct: 61  AGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEK 99

[Close]

BLAST of Carg02228 vs. ExPASy Swiss-Prot
Match: Q75GT2 (Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB1 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.4e-32
Identity = 63/98 (64.29%), Postives = 84/98 (85.71%), Query Frame = 0


Query: 2   GGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLISA 61
           GGV++Q +IKFRL DG+DIGPK +PAA+T+ATLKESI+AQWP+ KE GPRTV D+KLI+A
Sbjct: 3   GGVQEQFEIKFRLPDGTDIGPKRYPAASTVATLKESIVAQWPKDKEKGPRTVNDLKLINA 62

Query: 62  GKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           GKILENN+T+++C S + D  G +TTMHVV++ P+ +K
Sbjct: 63  GKILENNKTLSECKSPICDFSG-LTTMHVVVRAPTSDK 99

[Close]

BLAST of Carg02228 vs. ExPASy Swiss-Prot
Match: Q9MAB9 (Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana OX=3702 GN=MUB1 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.0e-32
Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M  V +QL+IKFRL DGSDIGPK FP ATT++ LKE++I++WPR KENGP+TVK+VKLIS
Sbjct: 1   MAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGK+LEN++TV D  S + ++ G+VTTMHV+IQ P  EK
Sbjct: 61  AGKVLENSKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEK 99

[Close]

BLAST of Carg02228 vs. ExPASy Swiss-Prot
Match: Q8GWJ6 (Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-26
Identity = 51/99 (51.52%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M G ED +++KFRL DG+DIGP  +  + T+++LKE +I+QWP+ KEN P+TV D+KLI+
Sbjct: 1   MAGEEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLIN 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRT+ +    + ++PG + TMH+V++ P+L+K
Sbjct: 61  AGKILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDK 99

[Close]

BLAST of Carg02228 vs. ExPASy Swiss-Prot
Match: Q9SH14 (Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana OX=3702 GN=MUB5 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 7.2e-26
Identity = 54/99 (54.55%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 3   GVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLISAG 62
           G ED +++KFRL DG+DIGP  +    T+A+LKE IIAQWP+ KEN P+ + +VKLI+ G
Sbjct: 2   GDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLINGG 61

Query: 63  KILENNRTVNDCSS--QLYDIPGSVTTMHVVIQPPSLEK 100
           KILENN+T+++  S   + ++PG VTTMHVV++PP  EK
Sbjct: 62  KILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEK 100

[Close]

BLAST of Carg02228 vs. ExPASy TrEMBL
Match: A0A6J1FFK5 (membrane-anchored ubiquitin-fold protein 2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111445036 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.9e-51
Identity = 101/106 (95.28%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGVEDQLDIKFRL+DGSDIGPKTFPAATTIATLK+SI+AQWPRGKENGPRTVKDV+LIS
Sbjct: 1   MGGVEDQLDIKFRLNDGSDIGPKTFPAATTIATLKQSILAQWPRGKENGPRTVKDVQLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE 107
           AGKILENNRTVNDC SQLYDIPGSVTTMHVVIQPPSLEKGMICSIE
Sbjct: 61  AGKILENNRTVNDCRSQLYDIPGSVTTMHVVIQPPSLEKGMICSIE 106

[Close]

BLAST of Carg02228 vs. ExPASy TrEMBL
Match: A0A6J1FKG2 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111445036 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.7e-47
Identity = 94/99 (94.95%), Postives = 98/99 (98.99%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGVEDQLDIKFRL+DGSDIGPKTFPAATTIATLK+SI+AQWPRGKENGPRTVKDV+LIS
Sbjct: 1   MGGVEDQLDIKFRLNDGSDIGPKTFPAATTIATLKQSILAQWPRGKENGPRTVKDVQLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRTVNDC SQLYDIPGSVTTMHVVIQPPSLEK
Sbjct: 61  AGKILENNRTVNDCRSQLYDIPGSVTTMHVVIQPPSLEK 99

[Close]

BLAST of Carg02228 vs. ExPASy TrEMBL
Match: A0A6J1JTJ8 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111489605 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 1.9e-45
Identity = 93/99 (93.94%), Postives = 96/99 (96.97%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           MGGV DQLDIKFRL+DGSDIGPKTFPAAT+IATLKESI+AQWPR KENGPRTVKDVKLIS
Sbjct: 1   MGGVGDQLDIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPREKENGPRTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRTVNDC SQLYDIPGSVTTMHVVIQPPSLEK
Sbjct: 61  AGKILENNRTVNDCRSQLYDIPGSVTTMHVVIQPPSLEK 99

[Close]

BLAST of Carg02228 vs. ExPASy TrEMBL
Match: A0A6J1BXN4 (Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC111006411 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.0e-43
Identity = 89/99 (89.90%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M GV DQL+IKFRL+DGSDIGPKTFPAAT+IATLKESI+AQWPR KENGPRTVKDVKLIS
Sbjct: 1   MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPREKENGPRTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRT+NDC S LYDIPGSVTTMHVVIQPPSLEK
Sbjct: 61  AGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEK 99

[Close]

BLAST of Carg02228 vs. ExPASy TrEMBL
Match: A0A1S3CA36 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103498522 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 6.7e-43
Identity = 88/99 (88.89%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M GV DQL+IKFRL+DGSDIGPKTFPAAT+IATLKESI+AQWPR KENGPRTVKDVKLIS
Sbjct: 1   MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPREKENGPRTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRT+NDC S LYDIPGSVTTMHVVIQPP+LEK
Sbjct: 61  AGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPTLEK 99

[Close]

BLAST of Carg02228 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-36
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M  V+DQL+IKFRL+DGSDIGPK FP ATT+ATLKE+++AQWPR KENGP+TVKDVKLIS
Sbjct: 1   MAEVKDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AG+ILENN+TV DC S + +  G+VTTMHV+IQ    EK
Sbjct: 61  AGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEK 99

[Close]

BLAST of Carg02228 vs. TAIR 10
Match: AT5G15460.2 (membrane-anchored ubiquitin-fold protein 2 )

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-36
Identity = 70/99 (70.71%), Postives = 84/99 (84.85%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M  V+DQL+IKFRL+DGSDIGPK FP ATT+ATLKE+++AQWPR KENGP+TVKDVKLIS
Sbjct: 1   MAEVKDQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRDKENGPKTVKDVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AG+ILENN+TV DC S + +  G+VTTMHV+IQ    EK
Sbjct: 61  AGRILENNKTVGDCRSPVGNFSGAVTTMHVIIQHQVTEK 99

[Close]

BLAST of Carg02228 vs. TAIR 10
Match: AT3G01050.1 (membrane-anchored ubiquitin-fold protein 1 precursor )

HSP 1 Score: 139.0 bits (349), Expect = 2.1e-33
Identity = 64/99 (64.65%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M  V +QL+IKFRL DGSDIGPK FP ATT++ LKE++I++WPR KENGP+TVK+VKLIS
Sbjct: 1   MAEVHNQLEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPREKENGPKTVKEVKLIS 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGK+LEN++TV D  S + ++ G+VTTMHV+IQ P  EK
Sbjct: 61  AGKVLENSKTVKDYRSPVSNLAGAVTTMHVIIQAPVTEK 99

[Close]

BLAST of Carg02228 vs. TAIR 10
Match: AT1G22050.1 (membrane-anchored ubiquitin-fold protein 6 precursor )

HSP 1 Score: 119.0 bits (297), Expect = 2.3e-27
Identity = 51/99 (51.52%), Postives = 77/99 (77.78%), Query Frame = 0


Query: 1   MGGVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLIS 60
           M G ED +++KFRL DG+DIGP  +  + T+++LKE +I+QWP+ KEN P+TV D+KLI+
Sbjct: 1   MAGEEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKDKENTPKTVNDMKLIN 60

Query: 61  AGKILENNRTVNDCSSQLYDIPGSVTTMHVVIQPPSLEK 100
           AGKILENNRT+ +    + ++PG + TMH+V++ P+L+K
Sbjct: 61  AGKILENNRTLAESRLPVCELPGMIITMHIVLRLPTLDK 99

[Close]

BLAST of Carg02228 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor )

HSP 1 Score: 117.9 bits (294), Expect = 5.1e-27
Identity = 54/99 (54.55%), Postives = 75/99 (75.76%), Query Frame = 0


Query: 3   GVEDQLDIKFRLDDGSDIGPKTFPAATTIATLKESIIAQWPRGKENGPRTVKDVKLISAG 62
           G ED +++KFRL DG+DIGP  +    T+A+LKE IIAQWP+ KEN P+ + +VKLI+ G
Sbjct: 2   GDEDLIELKFRLADGTDIGPSKYSQFMTVASLKEKIIAQWPKDKENAPKMINEVKLINGG 61

Query: 63  KILENNRTVNDCSS--QLYDIPGSVTTMHVVIQPPSLEK 100
           KILENN+T+++  S   + ++PG VTTMHVV++PP  EK
Sbjct: 62  KILENNKTLSEARSLITIGELPGIVTTMHVVLRPPLFEK 100

The following BLAST results are available for this feature:

BLAST of Carg02228 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016116.1	5.1e-53	100.00	Membrane-anchored ubiquitin-fold protein 2 [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022938992.1	8.1e-51	95.28	membrane-anchored ubiquitin-fold protein 2-like isoform X1 [Cucurbita moschata]	[more]
KAG6578556.1	3.8e-48	98.99	Membrane-anchored ubiquitin-fold protein 1, partial [Cucurbita argyrosperma subs...	[more]
XP_022938993.1	1.6e-46	94.95	membrane-anchored ubiquitin-fold protein 2-like isoform X2 [Cucurbita moschata]	[more]
XP_022993686.1	3.9e-45	93.94	membrane-anchored ubiquitin-fold protein 2-like [Cucurbita maxima] >XP_022993687...	[more]

BLAST of Carg02228 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LCS8	2.2e-35	70.71	Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q75GT2	1.4e-32	64.29	Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9MAB9	3.0e-32	64.65	Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q8GWJ6	3.2e-26	51.52	Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]
Q9SH14	7.2e-26	54.55	Membrane-anchored ubiquitin-fold protein 5 OS=Arabidopsis thaliana OX=3702 GN=MU...	[more]

BLAST of Carg02228 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFK5	3.9e-51	95.28	membrane-anchored ubiquitin-fold protein 2-like isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1FKG2	7.7e-47	94.95	Membrane-anchored ubiquitin-fold protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JTJ8	1.9e-45	93.94	Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1BXN4	3.0e-43	89.90	Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A1S3CA36	6.7e-43	88.89	Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103498522...	[more]

BLAST of Carg02228 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15460.1	1.6e-36	70.71	membrane-anchored ubiquitin-fold protein 2	[more]
AT5G15460.2	1.6e-36	70.71	membrane-anchored ubiquitin-fold protein 2	[more]
AT3G01050.1	2.1e-33	64.65	membrane-anchored ubiquitin-fold protein 1 precursor	[more]
AT1G22050.1	2.3e-27	51.52	membrane-anchored ubiquitin-fold protein 6 precursor	[more]
AT1G77870.1	5.1e-27	54.55	membrane-anchored ubiquitin-fold protein 5 precursor	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017000	Membrane-anchored ubiquitin-fold protein	PIRSF	PIRSF032572	MUB	coord: 1..101 e-value: 4.7E-41 score: 137.4
None	No IPR available	GENE3D	3.10.20.90		coord: 1..100 e-value: 4.9E-39 score: 134.4
None	No IPR available	PANTHER	PTHR13169:SF4	MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2	coord: 1..101
None	No IPR available	CDD	cd01814	Ubl_MUBs_plant	coord: 7..95 e-value: 7.18812E-47 score: 143.288
IPR039540	UBL3-like, ubiquitin domain	PFAM	PF13881	Rad60-SLD_2	coord: 6..99 e-value: 6.4E-36 score: 122.8
IPR040015	UBL3-like	PANTHER	PTHR13169	UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN	coord: 1..101
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 8..75 score: 8.633156
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02228-RA	Carg02228-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding