Carg02208 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATTGGATACAAAGGAAGGTATACCTTTACAATGTCACTTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAGTATGCTCTCTGTTCTACCCCCACCTTTTCCTAACTAATGAATCCGTGATCTGTTTTATCACTTGCAAGCATGCATAGTACCCATTTCTTTATGATTTGGATTGAAGTTGTGCTACCAGTACTATTGTCCAGGCAAATCATTATTGATGTTTACTGTTTCTTGTCCTAACTAATGAATCCGTGATCTGTTTTATCACTTCTTGTTCTCACTGTTAACCTCTTGAGTTCTCCTCATATTATTGTAGATACGTTGGTGGTTGTGCTGATGTGGTTCATGTTTTACAATGGATCGCGATACGTAAATGATTTGTACAAGAGGTATTGTGTTTACCTTTGCTCTACCTTTTCATCTTCAAAATCAGAAAATTAA ATGAATTGGATACAAAGGAAGGTATACCTTTACAATGTCACTTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACGTTGGTGGTTGTGCTGATGTGGTTCATGTTTTACAATGGATCGCGATACGTAAATGATTTGTACAAGAGGTATTGTGTTTACCTTTGCTCTACCTTTTCATCTTCAAAATCAGAAAATTAA ATGAATTGGATACAAAGGAAGGTATACCTTTACAATGTCACTTTTGGGCTGTACATGTTGGATTGGTGGGAGCGTATCCTCTTCAATACGTTGGTGGTTGTGCTGATGTGGTTCATGTTTTACAATGGATCGCGATACGTAAATGATTTGTACAAGAGGTATTGTGTTTACCTTTGCTCTACCTTTTCATCTTCAAAATCAGAAAATTAA MNWIQRKVYLYNVTFGLYMLDWWERILFNTLVVVLMWFMFYNGSRYVNDLYKRYCVYLCSTFSSSKSEN Homology
BLAST of Carg02208 vs. NCBI nr
Match: KAG7016096.1 (hypothetical protein SDJN02_21200, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 146.7 bits (369), Expect = 7.2e-32 Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0
BLAST of Carg02208 vs. NCBI nr
Match: XP_022939543.1 (uncharacterized protein LOC111445419 [Cucurbita moschata] >XP_022992929.1 uncharacterized protein LOC111489112 [Cucurbita maxima]) HSP 1 Score: 114.8 bits (286), Expect = 3.0e-22 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of Carg02208 vs. NCBI nr
Match: KAG6578536.1 (hypothetical protein SDJN03_22984, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 114.8 bits (286), Expect = 3.0e-22 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of Carg02208 vs. NCBI nr
Match: XP_023550233.1 (uncharacterized protein LOC111808468 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 113.6 bits (283), Expect = 6.7e-22 Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of Carg02208 vs. NCBI nr
Match: XP_004141475.1 (uncharacterized protein LOC101207494 [Cucumis sativus] >KAE8648948.1 hypothetical protein Csa_008788 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 3.3e-21 Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0
BLAST of Carg02208 vs. ExPASy TrEMBL
Match: A0A6J1JYU1 (uncharacterized protein LOC111489112 OS=Cucurbita maxima OX=3661 GN=LOC111489112 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of Carg02208 vs. ExPASy TrEMBL
Match: A0A6J1FLX2 (uncharacterized protein LOC111445419 OS=Cucurbita moschata OX=3662 GN=LOC111445419 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.5e-22 Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0
BLAST of Carg02208 vs. ExPASy TrEMBL
Match: A0A1S3C9L1 (uncharacterized protein LOC103498548 OS=Cucumis melo OX=3656 GN=LOC103498548 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21 Identity = 50/54 (92.59%), Postives = 53/54 (98.15%), Query Frame = 0
BLAST of Carg02208 vs. ExPASy TrEMBL
Match: A0A6J1BY20 (uncharacterized protein LOC111006754 OS=Momordica charantia OX=3673 GN=LOC111006754 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.0e-21 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Carg02208 vs. ExPASy TrEMBL
Match: A0A1U8JXD8 (uncharacterized protein LOC107910167 OS=Gossypium hirsutum OX=3635 GN=LOC107910167 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 7.5e-19 Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of Carg02208 vs. TAIR 10
Match: AT1G06515.1 (Protein of unknown function (DUF3317) ) HSP 1 Score: 97.1 bits (240), Expect = 6.1e-21 Identity = 41/54 (75.93%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Carg02208 vs. TAIR 10
Match: AT1G06515.2 (Protein of unknown function (DUF3317) ) HSP 1 Score: 97.1 bits (240), Expect = 6.1e-21 Identity = 41/54 (75.93%), Postives = 51/54 (94.44%), Query Frame = 0
BLAST of Carg02208 vs. TAIR 10
Match: AT2G30942.1 (Protein of unknown function (DUF3317) ) HSP 1 Score: 96.3 bits (238), Expect = 1.0e-20 Identity = 41/54 (75.93%), Postives = 50/54 (92.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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