Carg02194 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02194
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr15: 1176860 .. 1178641 (+)
RNA-Seq ExpressionCarg02194
SyntenyCarg02194
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAATAGGAAACTTCCAGAAAAGCTGAAAGTTCAGGCCGTCATCTCCAAGATGTTGCTCTTAAAGCTTCTTGGGGGCCAAGAACATCAGATAAAATTCTGTAGGTGGTGCTGTATAAGAGGCTTATTGTATGGTAAAGCCCTTAACTCTGCTTATCTTGGACTCTAGACTAGGCTGCACATTTCTACCAGCATTCTGCCTTGTTTACTTTATTATAACCATTTTTGTTCATGCAGAAACTTTCTCACTCCTTGTGTTAAAGGTTCTCATTGCTAAACAAGTGGAAAAGGTAGCGTGTGTTCTCACCCATAATGAACTCGGTTTGAGTTGTTCATTCTTAGTGTTTTATGGAAGACAACTGATTTGGTTACATTCAAAACATTTGTTAGCACTACATCTTGTCTTTCTTAATACCCCCACCTCGCCCACCTGACTCATAATGTGCTTAATCGTGTTGAGCTTATCAATTTTTCATAATGATGTTCTTTCCTTCTATTAGTTATGAAAATTTGGTGGATCTGTGTATTAATGTAACCAATGCCAATCATGTTTATGCTGCCTTGAGTTTTCTTTCTTTAATATATTTGAAAAGTGATACAAATGCCTATCTTTGGTCTAAAGCAAAGCAATGGATTCTAGCTTGTCATAGCAGCAAAGGTGGTAAAAGAAGATGTTGATTATACGCATTATAACGCATAGCATGAAACATCAAATGCCCCATCAATCTGTTTAGCTAACATAAAGCTACCTAGTCTTATTAGCAGTCACTTTTGACAAACAATCTAGCTTTCTTAAAAGCCATACATGTTGTTAGTCTCCAGAATGTGTTCGAAGTCTTAAAAGTTCAAAACTCTTGCAAATTTGATAATTGCTCAAATATTTGTCTTACTTATATACTTTCATGCAGGTTTTCTTGTACCATGGGATTAAATATAAATTGTAAGGGGGAGATTTAGCCATCGATAATTGAAATGGTAATGGGTACCTTATCTATTAAGTTATGTTTGGATTGACTGTAGTAGATATTTTATTTCACTAATGCGGTCATTTCCTACTTATCTATTGATGCGTTATGGGTTCGTTATTGAGTTTTCAAATTAAAAGTAGAAAGATAGTGCAAGATTAGACATGTATCATTCTTTTTGTTTGATATCATAGTTCTGATTGCTGATACTTGGTTTTTTCTCCCCATGTTGAATTGAATAATAATTCTTTTGGCAAGCGAAGACAAACTTTGCCAAACAGGTTGATTAGGACATGTCCATGAGCAAAACGATATGAGTGAGACTAAACGAGCCAAGAGGGTTTGTATCACTTTGCTGTGCGTTCATTACCAGGTTGGAAAATAGAAGAGGAGAAAAAAAGAAAAGAAAAGAAAAGAAGAAAGAAAGTGTCTTCATTTGTGTTGGAGCCTTTGGATTGTCATCTTCAATGGCTGTGATGTTGATCAGAATGTAGGCTGCAAACAAAAGACAACTTAGGTTCTTACAGACAGTGTGACAAACTTGTCATCATTTTTGTATGATTAGTAGCCATTGCTTCCCCCACTTGCTGCTTATCCATTTCTCACTACATTTATTGCAGAGACCAGCAATGGAGGTGGTGGTGGTGCTGTTGGGGGACCAACTTTGCAATATCTTTAGCCATTTCATCAGGCCTTCAAGTTTTCATTGGGAGGATTATTATGCTGTCTCGACAAAAAGAAAAAAGGTTGGATTTCCCTACCATTATCTTAGTTTTGATCTCTGCTGATTACTTCTTTTTGCTTAATATTGGATTAGAA

mRNA sequence

AAAATAGGAAACTTCCAGAAAAGCTGAAAGTTCAGGCCGTCATCTCCAAGATGTTGCTCTTAAAGCTTCTTGGGGGCCAAGAACATCAGATAAAATTCTGTAGGTGGTGCTGTATAAGAGGCTTATTGTATGAAACTTTCTCACTCCTTGTGTTAAAGGTTCTCATTGCTAAACAAGTGGAAAAGGTAGCGTGTGTTCTCACCCATAATGAACTCGAGACCAGCAATGGAGGTGGTGGTGGTGCTGTTGGGGGACCAACTTTGCAATATCTTTAGCCATTTCATCAGGCCTTCAAGTTTTCATTGGGAGGATTATTATGCTGTCTCGACAAAAAGAAAAAAGGTTGGATTTCCCTACCATTATCTTAGTTTTGATCTCTGCTGATTACTTCTTTTTGCTTAATATTGGATTAGAA

Coding sequence (CDS)

ATGTTGCTCTTAAAGCTTCTTGGGGGCCAAGAACATCAGATAAAATTCTGTAGGTGGTGCTGTATAAGAGGCTTATTGTATGAAACTTTCTCACTCCTTGTGTTAAAGGTTCTCATTGCTAAACAAGTGGAAAAGGTAGCGTGTGTTCTCACCCATAATGAACTCGAGACCAGCAATGGAGGTGGTGGTGGTGCTGTTGGGGGACCAACTTTGCAATATCTTTAG

Protein sequence

MLLLKLLGGQEHQIKFCRWCCIRGLLYETFSLLVLKVLIAKQVEKVACVLTHNELETSNGGGGGAVGGPTLQYL
Homology
[Close]
BLAST of Carg02194 vs. NCBI nr
Match: KAG7016082.1 (hypothetical protein SDJN02_21186 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 152.5 bits (384), Expect = 1.4e-33
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MLLLKLLGGQEHQIKFCRWCCIRGLLYETFSLLVLKVLIAKQVEKVACVLTHNELETSNG 60
          MLLLKLLGGQEHQIKFCRWCCIRGLLYETFSLLVLKVLIAKQVEKVACVLTHNELETSNG
Sbjct: 1  MLLLKLLGGQEHQIKFCRWCCIRGLLYETFSLLVLKVLIAKQVEKVACVLTHNELETSNG 60

Query: 61 GGGGAVGGPTLQYL 75
          GGGGAVGGPTLQYL
Sbjct: 61 GGGGAVGGPTLQYL 74

The following BLAST results are available for this feature:
BLAST of Carg02194 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7016082.11.4e-33100.00hypothetical protein SDJN02_21186 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of Carg02194 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg02194 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg02194 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02194-RACarg02194-RAmRNA