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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTTCTGAGAAAGAAAACGACGATAAATAATTCTGATTGGTCGGAGAGGCGAGAGAATGTGAGAGGGAGGGAGCGGCGGCGATTTCGTCGGAAGGATGAGACTGCGGCAGCAAAAATGTGCCGCGGAGCAGTGTGCAGCGGCTGGTAACAGAAGGGACGGGCCGGGTGAGAAGGGTTTAAGAGAAAAGGAAAGCTAGGATGGTTAAAATAATTTTAAAAAGAAATTAATTTAAGTTTAAATTTATTTTCAAATTCCATTTAATTTTTAACACAAAATTAGTTAAATAAAATCGTTTTTCCTCGAAAATAGTATTAAACTTAACCCAAAAAATCACCTAATTTTTAAATAAATAGAGTAAAAAAAAAAATAGAGATGAAAAATGTATTGTATATTTAGTTAGAAAGAATATTTGTAAATATTATTTTATTATTTTTATATTATTAATTTATTTAAATTTAAAGTCAACATTACAACAGCTATGTAAATTTAATGTTTAATGTTTAATTTGATGAATTTAGAAGTAAAATTTAAAAATTCAAAATTATTAATTAAATTTATTTTATATCGATTTAATAGTCAATTTATTCCATTAATTTGGGTCCAAGGTTTCCATTTATTTATTATTATTATTATTATTGAAGTAACAATAATATAATTTTATCTCACACATTTAAGCATGGCAAAATTTGTGGCTAAGCCACCAAGAATTCCAAACAATCGGTATCATTATTAAATAGCAACCGATTTTCCTCTCACAAGCTTATCAACAATTTTGGAGAACAACTAGGAGGTGGAGTGGTCCCCACGATGACGTCACCCATGTACAATCCCGGAAAACACTTCATTTTGTAATATAATAATATTTTTTTAAGTCTACGAGGCAAATTTACTAATATCTTAGGCACGTGGCAGGAATCAATTGGATTCCTTGGGTCCAGTCAACCCCGATATTTTTTTTCCCATTTTTTCCGTCTGAAAAGGAAAACGGCTCCGTCCTTTGACTTCAATCCCTCCCATAGAGCTTCTTCTTGTTCTTCTTTTGCTGCGGGATGGGCATTATTTGTCTCTTTCTCGGAGGGAATGATGAACTCAGGGCCTGGACTTATCTCTCCTTGA mRNA sequence ATGTTTCTGAGAAAGAAAACGACGATAAATAATTCTGATTGGTCGGAGAGGCGAGAGAATGTGAGAGGGAGGGAGCGGCGGCGATTTCGTCGGAAGGATGAGACTGCGGCAGCAAAAATGTGCCGCGGAGCAGTGTGCAGCGGCTGGAAAACGGCTCCGTCCTTTGACTTCAATCCCTCCCATAGAGCTTCTTCTTGTTCTTCTTTTGCTGCGGGATGGGCATTATTTGTCTCTTTCTCGGAGGGAATGATGAACTCAGGGCCTGGACTTATCTCTCCTTGA Coding sequence (CDS) ATGTTTCTGAGAAAGAAAACGACGATAAATAATTCTGATTGGTCGGAGAGGCGAGAGAATGTGAGAGGGAGGGAGCGGCGGCGATTTCGTCGGAAGGATGAGACTGCGGCAGCAAAAATGTGCCGCGGAGCAGTGTGCAGCGGCTGGAAAACGGCTCCGTCCTTTGACTTCAATCCCTCCCATAGAGCTTCTTCTTGTTCTTCTTTTGCTGCGGGATGGGCATTATTTGTCTCTTTCTCGGAGGGAATGATGAACTCAGGGCCTGGACTTATCTCTCCTTGA Protein sequence MFLRKKTTINNSDWSERRENVRGRERRRFRRKDETAAAKMCRGAVCSGWKTAPSFDFNPSHRASSCSSFAAGWALFVSFSEGMMNSGPGLISP
Homology
BLAST of Carg02165 vs. NCBI nr
Match: KAG7016053.1 (hypothetical protein SDJN02_21157, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.7 bits (478), Expect = 2.2e-44 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 1 MFLRKKTTINNSDWSERRENVRGRERRRFRRKDETAAAKMCRGAVCSGWKTAPSFDFNPS 60
MFLRKKTTINNSDWSERRENVRGRERRRFRRKDETAAAKMCRGAVCSGWKTAPSFDFNPS
Sbjct: 1 MFLRKKTTINNSDWSERRENVRGRERRRFRRKDETAAAKMCRGAVCSGWKTAPSFDFNPS 60
Query: 61 HRASSCSSFAAGWALFVSFSEGMMNSGPGLISP 94
HRASSCSSFAAGWALFVSFSEGMMNSGPGLISP
Sbjct: 61 HRASSCSSFAAGWALFVSFSEGMMNSGPGLISP 93
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7016053.1 | 2.2e-44 | 100.00 | hypothetical protein SDJN02_21157, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..30 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 10..30 |
Relationships
The following mRNA feature(s) are a part of this gene:
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