Carg02158 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02158
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr15: 945374 .. 946092 (+)
RNA-Seq Expression	Carg02158
Synteny	Carg02158

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTTAGGAATTCGATGTGGAGGAAATTGCGGTGTATTAGACCGTCGTTATGTGAATGTTCACGACGGATGTGATCAGAAAGCAGGTCCTCGTTCTTTGGCGGTTTCCACCGGAGGATTGAGGAAATCGAGCAGTTCCGTTTCTATATTGAAGAGTTTGCAGCCGGTGAATCGCCATGTGAAGGAGAGAACAGACAGCAACGAGGTGATTTCTCGCGATAAGTTCGATGAATGGATGAAGGAATCGGTAGTTAACATTGTAAAAAATCTTCGAGAAGCGCCTCTGTTTCTACGAGTTTACACGACGGATGAGGACGGCGAGGCGGCGAGATTCGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGCCGATCTTAGAGAAGCAATGGAAAAGCGGATCGACGCCGACGCCGGAAGGCATCATGTTCGTTGAAGAGCTTGAAGACGAGGATTACGAGGACGGCGAGTCGAAAGCGTGGGGGATTGTAATACAAGGCAGAGGCGTTGAACGTGGTGCGCCGGTTTGTTACCTGTTGAAGACGAGTAGAGCGGCGGGGCTAGGGATGTGGTGCACGCATTTCTGTCTGGTTAGGGTTAAGAATTTCAGAGAGACGACCAAATCGCAGCTTCAGAATTGTTGGTTGGTGCAGCATCAGTAAGAGATGAAGCAGATGCGGTTGCTACACTCACAATTCCAATTCAATTCAATACGTAA

mRNA sequence

ATGGCTTCTTTAGGAATTCGATGTGGAGGAAATTGCGGTGTATTAGACCGTCGTTATGTGAATGTTCACGACGGATGTGATCAGAAAGCAGGTCCTCGTTCTTTGGCGGTTTCCACCGGAGGATTGAGGAAATCGAGCAGTTCCGTTTCTATATTGAAGAGTTTGCAGCCGGTGAATCGCCATGTGAAGGAGAGAACAGACAGCAACGAGGTGATTTCTCGCGATAAGTTCGATGAATGGATGAAGGAATCGGTAGTTAACATTGTAAAAAATCTTCGAGAAGCGCCTCTGTTTCTACGAGTTTACACGACGGATGAGGACGGCGAGGCGGCGAGATTCGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGCCGATCTTAGAGAAGCAATGGAAAAGCGGATCGACGCCGACGCCGGAAGGCATCATGTTCGTTGAAGAGCTTGAAGACGAGGATTACGAGGACGGCGAGTCGAAAGCGTGGGGGATTGTAATACAAGGCAGAGGCGTTGAACGTGGTGCGCCGGTTTGTTACCTGTTGAAGACGAGTAGAGCGGCGGGGCTAGGGATGTGGTGCACGCATTTCTGTCTGAGAGACGACCAAATCGCAGCTTCAGAATTGTTGGTTGGTGCAGCATCAGTAAGAGATGAAGCAGATGCGGTTGCTACACTCACAATTCCAATTCAATTCAATACGTAA

Coding sequence (CDS)

ATGGCTTCTTTAGGAATTCGATGTGGAGGAAATTGCGGTGTATTAGACCGTCGTTATGTGAATGTTCACGACGGATGTGATCAGAAAGCAGGTCCTCGTTCTTTGGCGGTTTCCACCGGAGGATTGAGGAAATCGAGCAGTTCCGTTTCTATATTGAAGAGTTTGCAGCCGGTGAATCGCCATGTGAAGGAGAGAACAGACAGCAACGAGGTGATTTCTCGCGATAAGTTCGATGAATGGATGAAGGAATCGGTAGTTAACATTGTAAAAAATCTTCGAGAAGCGCCTCTGTTTCTACGAGTTTACACGACGGATGAGGACGGCGAGGCGGCGAGATTCGAGACGGAGAAGGCGGTGGAGGAAGATCGTTGGCCGATCTTAGAGAAGCAATGGAAAAGCGGATCGACGCCGACGCCGGAAGGCATCATGTTCGTTGAAGAGCTTGAAGACGAGGATTACGAGGACGGCGAGTCGAAAGCGTGGGGGATTGTAATACAAGGCAGAGGCGTTGAACGTGGTGCGCCGGTTTGTTACCTGTTGAAGACGAGTAGAGCGGCGGGGCTAGGGATGTGGTGCACGCATTTCTGTCTGAGAGACGACCAAATCGCAGCTTCAGAATTGTTGGTTGGTGCAGCATCAGTAAGAGATGAAGCAGATGCGGTTGCTACACTCACAATTCCAATTCAATTCAATACGTAA

Protein sequence

MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNRHVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVEEDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLLKTSRAAGLGMWCTHFCLRDDQIAASELLVGAASVRDEADAVATLTIPIQFNT

Homology

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BLAST of Carg02158 vs. NCBI nr
Match: KAG7016046.1 (hypothetical protein SDJN02_21150, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 467.2 bits (1201), Expect = 8.1e-128
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE
Sbjct: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSRAAGLGMWCTHFCLRDDQIAASELLVGAASVRDEADAVATLTIPIQFNT 233
           KTSRAAGLGMWCTHFCLRDDQIAASELLVGAASVRDEADAVATLTIPIQFNT
Sbjct: 181 KTSRAAGLGMWCTHFCLRDDQIAASELLVGAASVRDEADAVATLTIPIQFNT 232

[Close]

BLAST of Carg02158 vs. NCBI nr
Match: XP_022938776.1 (uncharacterized protein LOC111444891 [Cucurbita moschata])

HSP 1 Score: 404.4 bits (1038), Expect = 6.4e-109
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE
Sbjct: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSRAAGLGMWCTHFCL 198
           KTSRAAGLGMWCTHFCL
Sbjct: 181 KTSRAAGLGMWCTHFCL 197

[Close]

BLAST of Carg02158 vs. NCBI nr
Match: KAG6578483.1 (hypothetical protein SDJN03_22931, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 402.5 bits (1033), Expect = 2.4e-108
Identity = 195/198 (98.48%), Postives = 197/198 (99.49%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVS +KSLQPVNR
Sbjct: 90  MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSTMKSLQPVNR 149

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE
Sbjct: 150 HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 209

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL
Sbjct: 210 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 269

Query: 181 KTSRAAGLGMWCTHFCLR 199
           KTSRAAGLGMWCTHFCL+
Sbjct: 270 KTSRAAGLGMWCTHFCLK 287

[Close]

BLAST of Carg02158 vs. NCBI nr
Match: XP_022993514.1 (uncharacterized protein LOC111489497 [Cucurbita maxima])

HSP 1 Score: 394.4 bits (1012), Expect = 6.6e-106
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVS +KSLQ VNR
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSTMKSLQSVNR 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVK+RTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE
Sbjct: 61  HVKDRTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRWPILEKQWKSG+ PTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGAAPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSRAAGLGMWCTHFCL 198
           KTSRAAGLGMWCTHFCL
Sbjct: 181 KTSRAAGLGMWCTHFCL 197

[Close]

BLAST of Carg02158 vs. NCBI nr
Match: XP_023549554.1 (uncharacterized protein LOC111808023 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.9 bits (1008), Expect = 1.9e-105
Identity = 192/197 (97.46%), Postives = 193/197 (97.97%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASLGIRCGGNCGVLDRRYVNVHDGCDQKA PRSLAVSTGGLRKSSSSVS +KSLQPV R
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKACPRSLAVSTGGLRKSSSSVSTMKSLQPVIR 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE
Sbjct: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRWPILEKQWKSGS PTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGSAPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSRAAGLGMWCTHFCL 198
           KTSRAAGLGMWCTHFCL
Sbjct: 181 KTSRAAGLGMWCTHFCL 197

[Close]

BLAST of Carg02158 vs. ExPASy TrEMBL
Match: A0A6J1FE33 (uncharacterized protein LOC111444891 OS=Cucurbita moschata OX=3662 GN=LOC111444891 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE
Sbjct: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSRAAGLGMWCTHFCL 198
           KTSRAAGLGMWCTHFCL
Sbjct: 181 KTSRAAGLGMWCTHFCL 197

[Close]

BLAST of Carg02158 vs. ExPASy TrEMBL
Match: A0A6J1K0D9 (uncharacterized protein LOC111489497 OS=Cucurbita maxima OX=3661 GN=LOC111489497 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.2e-106
Identity = 191/197 (96.95%), Postives = 194/197 (98.48%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVS +KSLQ VNR
Sbjct: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSTMKSLQSVNR 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVK+RTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE
Sbjct: 61  HVKDRTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRWPILEKQWKSG+ PTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL
Sbjct: 121 EDRWPILEKQWKSGAAPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180

Query: 181 KTSRAAGLGMWCTHFCL 198
           KTSRAAGLGMWCTHFCL
Sbjct: 181 KTSRAAGLGMWCTHFCL 197

[Close]

BLAST of Carg02158 vs. ExPASy TrEMBL
Match: A0A6J1BZC8 (uncharacterized protein LOC111006084 OS=Momordica charantia OX=3673 GN=LOC111006084 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 8.8e-80
Identity = 159/214 (74.30%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDG-CDQKAGPRSLAVSTGG---LRKSSSSVSILKSLQ 60
           MASLGIRCGGNCGVLDR YVNVHDG CDQKAGPRSL V TG     R+S   VS + SLQ
Sbjct: 1   MASLGIRCGGNCGVLDRPYVNVHDGCCDQKAGPRSLVVPTGSGARWRRSRRFVSAMTSLQ 60

Query: 61  PVNRHVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETE 120
           PVNR    R + NEVISRDK DEWMKESVV+IVKNLREAPLFLR YTT EDGEAARFETE
Sbjct: 61  PVNR----RGNGNEVISRDKLDEWMKESVVDIVKNLREAPLFLRFYTT-EDGEAARFETE 120

Query: 121 KAVEEDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYED-------------GESKAWGI 180
           KAVEE RWP+LE+QWK+G+ P PEGI+FV+ELED+DY++             GESKAWGI
Sbjct: 121 KAVEEKRWPVLEEQWKNGAAPMPEGILFVQELEDDDYDEDADGGGGNGSNIAGESKAWGI 180

Query: 181 VIQGRGVERGAPVCYLLKTSRAAGLGMWCTHFCL 198
           VIQGRGVERG PVCYLLKTS AAGLG+WCTHFCL
Sbjct: 181 VIQGRGVERGGPVCYLLKTSSAAGLGLWCTHFCL 209

[Close]

BLAST of Carg02158 vs. ExPASy TrEMBL
Match: A0A6J1HGI4 (uncharacterized protein LOC111463354 OS=Cucurbita moschata OX=3662 GN=LOC111463354 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.4e-71
Identity = 142/200 (71.00%), Postives = 156/200 (78.00%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           MASL IRCG N   LD  Y NV DGCDQKA PRSL    G  RKS + +S +KSLQPV  
Sbjct: 1   MASLAIRCGRNFSALDHPYANVPDGCDQKASPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVK R   NE ISRDK D+WMKESVV IVKNLREAPLFLR YTT EDG+ AR ETEKAVE
Sbjct: 61  HVKGRKKGNEAISRDKLDKWMKESVVEIVKNLREAPLFLRWYTT-EDGKGARLETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRW  LE+QWK+G   TPEGI+FV+ELE+EDYE GESKAWGIV+QGR VERGAPVCYLL
Sbjct: 121 EDRWRTLEEQWKNGEARTPEGIIFVQELEEEDYE-GESKAWGIVVQGRCVERGAPVCYLL 180

Query: 181 KTSRA---AGLGMWCTHFCL 198
           KTS +    G+G+WCTHFCL
Sbjct: 181 KTSSSRGGGGVGLWCTHFCL 198

[Close]

BLAST of Carg02158 vs. ExPASy TrEMBL
Match: A0A6J1JNW7 (uncharacterized protein LOC111487559 OS=Cucurbita maxima OX=3661 GN=LOC111487559 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 8.3e-70
Identity = 139/198 (70.20%), Postives = 153/198 (77.27%), Query Frame = 0


Query: 1   MASLGIRCGGNCGVLDRRYVNVHDGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQPVNR 60
           M SL I+CG N   LD  Y NV DGCDQK  PRSL    G  RKS + +S +KSLQPV  
Sbjct: 1   MVSLAIQCGRNFSALDHGYANVPDGCDQKVSPRSLVAFPGRFRKSRTHISSMKSLQPVKG 60

Query: 61  HVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEKAVE 120
           HVK R   NE IS DK D+WMKESVV IVKNLREAPLFLR YTT EDG+ AR ETEKAVE
Sbjct: 61  HVKGRKKGNEAISSDKLDKWMKESVVEIVKNLREAPLFLRWYTT-EDGKGARLETEKAVE 120

Query: 121 EDRWPILEKQWKSGSTPTPEGIMFVEELEDEDYEDGESKAWGIVIQGRGVERGAPVCYLL 180
           EDRW  LE+QWK+G   TPEGI+FV+ELEDEDYE GESKAWGIV+QGR VERGAPVCYLL
Sbjct: 121 EDRWRTLEEQWKNGEARTPEGIIFVQELEDEDYE-GESKAWGIVVQGRCVERGAPVCYLL 180

Query: 181 KTSRA-AGLGMWCTHFCL 198
           KTS +  G+G+WCTHFCL
Sbjct: 181 KTSSSRGGVGLWCTHFCL 196

[Close]

BLAST of Carg02158 vs. TAIR 10
Match: AT3G56360.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G05250.1); Has 45 Blast hits to 45 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.9 bits (307), Expect = 3.5e-28
Identity = 81/211 (38.39%), Postives = 114/211 (54.03%), Query Frame = 0


Query: 3   SLGIRCGGN--CGV-LDRRYVNVH--DGCDQKAGPRSLAVSTGGLRKSSSSVSILKSLQP 62
           S  I CGG   C V  DRR +N++    C      R    + G +  S   +S   +   
Sbjct: 4   SARICCGGGSACAVRCDRRTLNLNSRSSCVVPVTNRRNMCAIGKISMSMEDLSPPSAAVK 63

Query: 63  VNRHVKERTDSNEVISRDKFDEWMKESVVNIVKNLREAPLFLRVYTTDEDGEAARFETEK 122
           + R +  R     V+SR+K D W+++SVV IVKNLRE+PL + +Y     G        K
Sbjct: 64  IER-IGGRKRGGSVVSREKLDVWLRDSVVEIVKNLRESPLLMHLYAEANGGLTTTATNPK 123

Query: 123 AVEEDRWPILEKQWKSGSTPTPEGIMFVEEL------EDEDYEDG----ESKAWGIVIQG 182
           A   + W  +E +W  G   TPEG++ VE+L      +D+D++ G    ++ AWGIV QG
Sbjct: 124 A---EDWTEMEGKWGRGEERTPEGVILVEKLADGDIADDDDHDGGACGEDTSAWGIVAQG 183

Query: 183 RGVERGAPVCYLLKTSRA-AGLGMWCTHFCL 198
           RG + G PVCYLLKT+R  +G+G  CTHFCL
Sbjct: 184 RGSDTG-PVCYLLKTTRVRSGMGTVCTHFCL 209

[Close]

BLAST of Carg02158 vs. TAIR 10
Match: AT5G05250.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56360.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-27
Identity = 79/190 (41.58%), Postives = 111/190 (58.42%), Query Frame = 0


Query: 34  SLAVSTGGLRKSS---SSVSILKSLQPVNRH-------VKERTDSNEV-ISRDKFDEWMK 93
           S  ++ GG R+SS    S SI +++  + +         + R D  EV   R+K D WMK
Sbjct: 35  SFPINLGGNRRSSIGTISASIGEAVTEIEKQRGGRRSGGRSRGDRWEVEAEREKLDRWMK 94

Query: 94  ESVVNIVKNLREAPLFLRVYTTD-EDGEAARFETEKAVEEDRWPILEKQWKSGSTPTPEG 153
           ESV  IVKNL EAPL + +YT D E+G      T   ++ + W  ++ +W+ G    PEG
Sbjct: 95  ESVTEIVKNLSEAPLLVHLYTGDKEEG------TVVVMKAEEWAAVKGRWERGEAEMPEG 154

Query: 154 IMFVEELEDED------YEDGE-SKAWGIVIQGRGVERGAPVCYLLKTSR-------AAG 198
           I+FVE+L   +      ++ G+ ++AWG+V+QGRGVE G PVCYLLKT+R        +G
Sbjct: 155 IVFVEQLGAAEESCGCGFDGGDGTRAWGLVVQGRGVECG-PVCYLLKTTRVGSGSGSGSG 214

The following BLAST results are available for this feature:

BLAST of Carg02158 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016046.1	8.1e-128	100.00	hypothetical protein SDJN02_21150, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022938776.1	6.4e-109	100.00	uncharacterized protein LOC111444891 [Cucurbita moschata]	[more]
KAG6578483.1	2.4e-108	98.48	hypothetical protein SDJN03_22931, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022993514.1	6.6e-106	96.95	uncharacterized protein LOC111489497 [Cucurbita maxima]	[more]
XP_023549554.1	1.9e-105	97.46	uncharacterized protein LOC111808023 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg02158 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg02158 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FE33	3.1e-109	100.00	uncharacterized protein LOC111444891 OS=Cucurbita moschata OX=3662 GN=LOC1114448...	[more]
A0A6J1K0D9	3.2e-106	96.95	uncharacterized protein LOC111489497 OS=Cucurbita maxima OX=3661 GN=LOC111489497...	[more]
A0A6J1BZC8	8.8e-80	74.30	uncharacterized protein LOC111006084 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1HGI4	3.4e-71	71.00	uncharacterized protein LOC111463354 OS=Cucurbita moschata OX=3662 GN=LOC1114633...	[more]
A0A6J1JNW7	8.3e-70	70.20	uncharacterized protein LOC111487559 OS=Cucurbita maxima OX=3661 GN=LOC111487559...	[more]

BLAST of Carg02158 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56360.1	3.5e-28	38.39	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G05250.1	2.9e-27	41.58	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35127	FAMILY NOT NAMED	coord: 1..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02158-RA	Carg02158-RA	mRNA