Carg02150 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02150
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Unknown protein
Location	Carg_Chr15: 911173 .. 911778 (-)
RNA-Seq Expression	Carg02150
Synteny	Carg02150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTGGAAACTACCACCAAGTCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTCAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCCCATTCTACTTCCAAAGCCTCTCCTAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCCTCGTCGTCGTCGTCCTCCTCCTTCGCATCATGGTCTTCCTCTCGCTCGTCGCCCTCCGCTTTCGTTAGACCTAAATTCTTCAAACATCGTCGCTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGCTCTTCTTCACGTAGAGCTTCATTGTTCCGAGGTTGTTACCGGTTAGTGAGTGTGAAGAACGCTTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

mRNA sequence

ATGGAAGCTGGAAACTACCACCAAGTCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTCAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCCCATTCTACTTCCAAAGCCTCTCCTAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCCTCGTCGTCGTCGTCCTCCTCCTTCGCATCATGGTCTTCCTCTCGCTCGTCGCCCTCCGCTTTCGTTAGACCTAAATTCTTCAAACATCGTCGCTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGCTCTTCTTCACGTAGAGCTTCATTGTTCCGAGGTTGTTACCGGTTAGTGAGTGTGAAGAACGCTTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

Coding sequence (CDS)

ATGGAAGCTGGAAACTACCACCAAGTCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTCAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCCCATTCTACTTCCAAAGCCTCTCCTAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCCTCGTCGTCGTCGTCCTCCTCCTTCGCATCATGGTCTTCCTCTCGCTCGTCGCCCTCCGCTTTCGTTAGACCTAAATTCTTCAAACATCGTCGCTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGCTCTTCTTCACGTAGAGCTTCATTGTTCCGAGGTTGTTACCGGTTAGTGAGTGTGAAGAACGCTTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

Protein sequence

MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRPKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRLVSVKNALLSIVGHGSASRGTH

Homology

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: KAG7016038.1 (hypothetical protein SDJN02_21142, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.0 bits (985), Expect = 7.8e-103
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120
           SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP
Sbjct: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180

Query: 181 VSVKNALLSIVGHGSASRGTH 202
           VSVKNALLSIVGHGSASRGTH
Sbjct: 181 VSVKNALLSIVGHGSASRGTH 201

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_022939362.1 (uncharacterized serine-rich protein C215.13-like [Cucurbita moschata])

HSP 1 Score: 382.5 bits (981), Expect = 2.3e-102
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP
Sbjct: 61  SYYSSSHSTSKVSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180

Query: 181 VSVKNALLSIVGHGSASRGTH 202
           VSVKNALLSIVGHGSASRGTH
Sbjct: 181 VSVKNALLSIVGHGSASRGTH 201

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: KAG6578473.1 (hypothetical protein SDJN03_22921, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 377.5 bits (968), Expect = 7.3e-101
Identity = 199/202 (98.51%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSS-SSSFASWSSSRSSPSAFVR 120
           SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSS SSSFASWSSSRSSPSAFVR
Sbjct: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSASSSFASWSSSRSSPSAFVR 120

Query: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYR 180
           PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+
Sbjct: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180

Query: 181 LVSVKNALLSIVGHGSASRGTH 202
           LVSVKNALLSIVGHGSASRGTH
Sbjct: 181 LVSVKNALLSIVGHGSASRGTH 202

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_022993995.1 (uncharacterized serine-rich protein C215.13-like [Cucurbita maxima])

HSP 1 Score: 374.0 bits (959), Expect = 8.0e-100
Identity = 197/202 (97.52%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSF-SSSSSSSSSFASWSSSRSSPSAFVR 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSF SSSSSSSSSF SWSSSRSSPSAFVR
Sbjct: 61  SYYSSSHSTSKPSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSSFTSWSSSRSSPSAFVR 120

Query: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYR 180
           PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+
Sbjct: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180

Query: 181 LVSVKNALLSIVGHGSASRGTH 202
           LVSVKNALLSIVGHGSASRGTH
Sbjct: 181 LVSVKNALLSIVGHGSASRGTH 202

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_023551135.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.6 bits (945), Expect = 3.4e-98
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120
           SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSS    SWSSSRSSPSAFVRP
Sbjct: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSS----SWSSSRSSPSAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+L
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQL 180

Query: 181 VSVKNALLSIVGHGSASRGTH 202
           VSVK ALLSIVGHGSASRGTH
Sbjct: 181 VSVKKALLSIVGHGSASRGTH 197

[Close]

BLAST of Carg02150 vs. ExPASy TrEMBL
Match: A0A6J1FGK5 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita moschata OX=3662 GN=LOC111445301 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.1e-102
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP
Sbjct: 61  SYYSSSHSTSKVSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180

Query: 181 VSVKNALLSIVGHGSASRGTH 202
           VSVKNALLSIVGHGSASRGTH
Sbjct: 181 VSVKNALLSIVGHGSASRGTH 201

[Close]

BLAST of Carg02150 vs. ExPASy TrEMBL
Match: A0A6J1K022 (uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=LOC111489820 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.9e-100
Identity = 197/202 (97.52%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSF-SSSSSSSSSFASWSSSRSSPSAFVR 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTASSFSF SSSSSSSSSF SWSSSRSSPSAFVR
Sbjct: 61  SYYSSSHSTSKPSPKPTRFTSIFRKSRTASSFSFSSSSSSSSSSFTSWSSSRSSPSAFVR 120

Query: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYR 180
           PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+
Sbjct: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180

Query: 181 LVSVKNALLSIVGHGSASRGTH 202
           LVSVKNALLSIVGHGSASRGTH
Sbjct: 181 LVSVKNALLSIVGHGSASRGTH 202

[Close]

BLAST of Carg02150 vs. ExPASy TrEMBL
Match: A0A0A0K7T8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 5.1e-68
Identity = 159/201 (79.10%), Postives = 168/201 (83.58%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLTPPPSY+SSSHSTSK
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSK 89

Query: 72  ASPKPTRFTSIF-----RKSRTASSFSFSS-SSSSSSSFASW----SSSRSSPSAFVRPK 131
           AS KPT  +SIF     RKSRT+ SFS SS SSSSSSS ASW    SSS SSPS FVRPK
Sbjct: 90  ASSKPTLLSSIFPRLTPRKSRTSPSFSSSSGSSSSSSSLASWSSSFSSSSSSPSPFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAV--GSPDSPTSTLCFGGGSSSRRASLFRGCYR 191
           FFK RR FS+ PSLPFE SFDD +GDE V   +P+SPTS LCFGGGSSS RASLF GCY+
Sbjct: 150 FFKRRRRFSDIPSLPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSS-RASLFGGCYQ 209

Query: 192 LVSVKNALLSIVGHGSASRGT 201
           LVSVKNALLSIVGHGSASRGT
Sbjct: 210 LVSVKNALLSIVGHGSASRGT 229

[Close]

BLAST of Carg02150 vs. ExPASy TrEMBL
Match: A0A5A7UC51 (Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G005080 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.4e-67
Identity = 158/202 (78.22%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLTPPPSY+SSSHSTSK
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSK 89

Query: 72  ASPKPTRFTSIF-----RKSRTASSFSFSS-SSSSSSSFASW----SSSRSSPSAFVRPK 131
           AS KPT  +SIF     RKSRT  SFS SS SSSSSSS ASW    SSS SSPS FVRPK
Sbjct: 90  ASSKPTLLSSIFPRLTPRKSRTFPSFSSSSGSSSSSSSLASWSSSFSSSSSSPSPFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAVG---SPDSPTSTLCFGGGSSSRRASLFRGCY 191
           FFK RR FS+ PSLPFE SFDD +GDE V    +P+SPTS LCFGGGSSS RASLF GCY
Sbjct: 150 FFKRRRHFSDIPSLPFEYSFDDKDGDEVVAGSTAPNSPTSILCFGGGSSS-RASLFGGCY 209

Query: 192 RLVSVKNALLSIVGHGSASRGT 201
           +LVSVK ALLSIVGHGSASRGT
Sbjct: 210 QLVSVKKALLSIVGHGSASRGT 230

[Close]

BLAST of Carg02150 vs. ExPASy TrEMBL
Match: A0A1S4E178 (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 7.4e-67
Identity = 158/202 (78.22%), Postives = 166/202 (82.18%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLTPPPSY+SSSHSTSK
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTPPPSYFSSSHSTSK 89

Query: 72  ASPKPTRFTSIF-----RKSRTASSFSFSS-SSSSSSSFASW----SSSRSSPSAFVRPK 131
           AS KPT  +SIF     RKSRT  SFS SS SSSSSSS ASW    SSS SSPS FVRPK
Sbjct: 90  ASSKPTLLSSIFPRLTPRKSRTFPSFSSSSGSSSSSSSLASWSSSFSSSSSSPSPFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAVG---SPDSPTSTLCFGGGSSSRRASLFRGCY 191
           FFK RR FS+ PSLPFE SFDD +GDE V    +P+SPTS LCFGGGSSS RASLF GCY
Sbjct: 150 FFKRRRHFSDIPSLPFEYSFDDKDGDEVVAGSTAPNSPTSILCFGGGSSS-RASLFGGCY 209

Query: 192 RLVSVKNALLSIVGHGSASRGT 201
           +LVSVK ALLSIVGHGSASRGT
Sbjct: 210 QLVSVKKALLSIVGHGSASRGT 230

[Close]

BLAST of Carg02150 vs. TAIR 10
Match: AT2G40475.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-19
Identity = 90/198 (45.45%), Postives = 113/198 (57.07%), Query Frame = 0


Query: 8   QVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTS--IPPLTPPPSYYSS 67
           ++ +KE++   +SS   YYGGA  ++PF WE+RPGTPKH     S  +PPLTPPPSYYSS
Sbjct: 16  KIIVKESSQVNSSSRIYYYGGA--SVPFLWETRPGTPKHALFSESLRLPPLTPPPSYYSS 75

Query: 68  SHST----SKA-SPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRP 127
           S S+    SKA + K TRF      SR  S  SFS SS+SSSS +S+SSS        RP
Sbjct: 76  SSSSGNKLSKARTIKQTRFVKTL-LSRHVSRPSFSWSSASSSSSSSYSSSSPPSKVEHRP 135

Query: 128 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 187
                R+C+S S S   E   DD E  E V S  SPTSTLC+  G SS   S+       
Sbjct: 136 -----RKCYSCSRSYVKE---DDEE--EIVSS--SPTSTLCYKRGFSSSMGSM------- 188

Query: 188 VSVKNALLSIVGHGSASR 199
              K AL S++ HGS+ +
Sbjct: 196 ---KRALCSVLSHGSSRK 188

[Close]

BLAST of Carg02150 vs. TAIR 10
Match: AT5G01790.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 9.7e-11
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 16  SAANSSFRV-YYGGATGAIPFRWESRPGTPKHTYSD-TSIPPLTPPPSYYS-SSHSTSKA 75
           SAA  SFR+ YY GA GA+PF WES PGTPKH  S+  ++PPLTPPPS++S S     + 
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRR 116

Query: 76  SPKPTR 79
           S K T+
Sbjct: 117 SKKSTK 122

[Close]

BLAST of Carg02150 vs. TAIR 10
Match: AT3G56260.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G40475.1). )

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-10
Identity = 70/165 (42.42%), Postives = 89/165 (53.94%), Query Frame = 0


Query: 25  YYGGATGAIPFRWESRPGTPK-HTYSDTSIP-PLTPPPSYYSSS-----HSTSKASPKPT 84
           YYGGA  +IPF WESRPGTPK H  SD+S+P PLTPPPSYYSS       + SK   K +
Sbjct: 18  YYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

Query: 85  RFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRPKFFKHRRCFSNSPSLPF 144
           +F S    S    S +  S  ++SSSF SWSS+ SS S    P     +R   +  S   
Sbjct: 78  KFLSFSMFSDLRRS-NHGSKKTASSSF-SWSSTSSSSSFSSSPPHSLKKRMSHDKKSPLL 137

Query: 145 ECSFDDNEGDEAVGSPDSPTSTLCF--GG--GSSSRRASLFRGCY 179
             +++++E         SPTSTLC   GG  G SS   S+ R  +
Sbjct: 138 YANYEEDE------LRSSPTSTLCCSNGGRLGCSSSMGSVTRALF 172

[Close]

BLAST of Carg02150 vs. TAIR 10
Match: AT1G06930.1 (unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; Bacteria - 29; Metazoa - 379; Fungi - 125; Plants - 120; Viruses - 25; Other Eukaryotes - 3800 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 6.3e-10
Identity = 48/99 (48.48%), Postives = 62/99 (62.63%), Query Frame = 0


Query: 25  YYGGATGAIPFRWESRPGTPK-----------HTYSDTSIP---PLTPPPSY-YSSSHST 84
           YYGG++ A+PF+WES+PGTP+           ++ SD + P   PLTPPPSY Y+S  ST
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 85  SKASPKPTR--FTSIFRKSRTASSFSFSSSSSSSSSFAS 107
              SPK T   F+S+  K+R+  S   SSSSSSSSS  S
Sbjct: 84  KHVSPKKTNTLFSSLLSKNRSVPSSPASSSSSSSSSVPS 122

The following BLAST results are available for this feature:

BLAST of Carg02150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016038.1	7.8e-103	100.00	hypothetical protein SDJN02_21142, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022939362.1	2.3e-102	99.50	uncharacterized serine-rich protein C215.13-like [Cucurbita moschata]	[more]
KAG6578473.1	7.3e-101	98.51	hypothetical protein SDJN03_22921, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022993995.1	8.0e-100	97.52	uncharacterized serine-rich protein C215.13-like [Cucurbita maxima]	[more]
XP_023551135.1	3.4e-98	96.52	putative protein TPRXL [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg02150 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Carg02150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FGK5	1.1e-102	99.50	uncharacterized serine-rich protein C215.13-like OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1K022	3.9e-100	97.52	uncharacterized serine-rich protein C215.13-like OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A0A0K7T8	5.1e-68	79.10	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1	[more]
A0A5A7UC51	7.4e-67	78.22	Putative serine-rich protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S4E178	7.4e-67	78.22	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1	[more]

BLAST of Carg02150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40475.1	2.6e-19	45.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G01790.1	9.7e-11	56.06	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G56260.2	1.7e-10	42.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06930.1	6.3e-10	48.48	unknown protein; Has 4478 Blast hits to 355 proteins in 82 species: Archae - 0; ...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..78
None	No IPR available	PANTHER	PTHR33257:SF24	EXPRESSED PROTEIN	coord: 12..179
None	No IPR available	PANTHER	PTHR33257	OS05G0165500 PROTEIN	coord: 12..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02150-RA	Carg02150-RA	mRNA