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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGATTCATCCCTTGGAAATCCAGTCTCGGCTTATCCACTTCATTGTCCTCCCGGTACGACGGCGGACGTTGGAGCTTCAGATCGGACGCCGGCGGATTTGTTCTCGTAGTAGTGGTAGACGGCGGCGCCGGAAAGAACCGCCAACGTCAATGCCTGAGCATGCATCCTACAAAACAAAGATTCCGATTACACGTTTTTTCTTTTTAAAGAAAGGAGAGGATTTGGAGGGGATGTTACCTAGCGTGGATTAGTCGGAGGCTTGGCTTGAGGGGAGTTGTTGATCGGGTATAGGCGAGGGATGCTCCGATCCCAGATGCCCACAGTGCTCCTGTAAGAAAAAAACAGAGAGGGATTGAATGAAAAGGAGTATTTTGGGATCTAGAATAAGGCTAAAGATGGTATTGAAGAGTTACCAATGCTGGTGAGTTTGTGTTGGGAAACCCAGGCTTGAATAGCTTCCATTGTTGTTGTTTTTATTGTCTTAAAATCAGTTGTGTGTGCAGGTTGCAGTGAGCAGCACTGAAGCAGGAAGAGAAGAAGATTATATTTTATATATATATATATATA mRNA sequence ATGATTCATCCCTTGGAAATCCAGTCTCGGCTTATCCACTTCATTGTCCTCCCGGTACGACGGCGGACGTTGGAGCTTCAGATCGGACGCCGGCGGATTTGTTCTCGTAGTAGTGGTAGACGGCGGCGCCGGAAAGAACCGCCAACGTCAATGCCTGAGCATGCATCCTACAAAACAAAGATTCCGATTACACGTTGCAGTGAGCAGCACTGAAGCAGGAAGAGAAGAAGATTATATTTTATATATATATATATATA Coding sequence (CDS) ATGATTCATCCCTTGGAAATCCAGTCTCGGCTTATCCACTTCATTGTCCTCCCGGTACGACGGCGGACGTTGGAGCTTCAGATCGGACGCCGGCGGATTTGTTCTCGTAGTAGTGGTAGACGGCGGCGCCGGAAAGAACCGCCAACGTCAATGCCTGAGCATGCATCCTACAAAACAAAGATTCCGATTACACGTTGCAGTGAGCAGCACTGA Protein sequence MIHPLEIQSRLIHFIVLPVRRRTLELQIGRRRICSRSSGRRRRRKEPPTSMPEHASYKTKIPITRCSEQH
Homology
BLAST of Carg02147 vs. NCBI nr
Match: KAG7016035.1 (hypothetical protein SDJN02_21139, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 138.3 bits (347), Expect = 2.6e-29 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0
Query: 1 MIHPLEIQSRLIHFIVLPVRRRTLELQIGRRRICSRSSGRRRRRKEPPTSMPEHASYKTK 60
MIHPLEIQSRLIHFIVLPVRRRTLELQIGRRRICSRSSGRRRRRKEPPTSMPEHASYKTK
Sbjct: 1 MIHPLEIQSRLIHFIVLPVRRRTLELQIGRRRICSRSSGRRRRRKEPPTSMPEHASYKTK 60
Query: 61 IPITRCSEQH 71
IPITRCSEQH
Sbjct: 61 IPITRCSEQH 70
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| KAG7016035.1 | 2.6e-29 | 100.00 | hypothetical protein SDJN02_21139, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
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| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 34..70 |
Relationships
The following mRNA feature(s) are a part of this gene:
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