Carg02116 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg02116
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEukaryotic translation initiation factor 3 subunit F
LocationCarg_Chr15: 751753 .. 755169 (-)
RNA-Seq ExpressionCarg02116
SyntenyCarg02116
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCTTCTTCCAAAAATTGGAGGTAGAACAGAAACCCTAGCATCCGCCTCCGCTCCTTCGTCGTCTCTCTCGGCCTCCATTTTTACGGAGATAGGTTAATTCGAACTTCAAGCAATGGCAACGACGGAGAGCACGGTCTTGCAATTTTCACAGTCTTCTAACACGTTATCTGCGAAGGTTCACCCTCTGGTAATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCTGACCAGGCCGATCGAGTAATCGGTACTCTTCTTGGCTCGGTTTTACCTGATGGAACCGTTGATATTCGCAACTCTTATGCTGTTCCTCATAACGAGTTCTCGGATCAGGTCCTCCTTACTCTGTATTAATCTCATCTCTGTTGTTTCCTCGATGTAATTGTTTGGGTTGCCACATATTCTTGGCGTTCTTATTGATTTTTGGCTGATAATTAAAGCTCTTGTTTCTATATTTTTCCTTGACGAATTTATTTCGTCCTCTGTCCCGTTGGGAAAATTAGGGTTCCCTGTCTTCCCTCTATTCCTTTTTTCAATTTGGTTTTCGATTATATCGTACTTCGTTAAATTCCTTAATAATTCATGCAAATTACATATACAAGAGAATCGTGAACATTTAAATTATGGTTGTAGATAGACCTTTATGATTTTATACGTTCTTTGTTTCATTGAATTCAAATGATATTTTAGGTTAGACTTGCTAGTAACGGTCATGTTTGTTCTACCATTTTGCAAAAAAATTGTATATTCCAAATTCTCTATTTCACTCTAATACTTCATTTTCACTCTTTTCATCATAACAGGTTGCGCTGGATATTGACTATCATCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAGGTTATCGTTGGATGGTAAAGCCGATCCTTCTTTACTATGTTTATCAGCTATAGTTGAAGTGCCATTTCTTGTTGGGTAAGGGACTGGATATCATTAAGGCAGAAGTTGGACAAAAGTTGCGAAGTTACAAATTAAACGATTTAGTACAAGAGCCCAACAAGAGAAATACAATATCATCCAACATATGATCCTTTGAATTCTCCTCATCTTTATCAACTCTAGTTAAATTCCTTTAGTTTATTTCCACAGTTTGTTTTTGCAACTACTGTCTGTTGCCCCTTTGGTTTTGCCCATTTGCCTCTGCATATTTCTTATTTTTCCGGATGAAATTGGTTTCTCATTAGAAGGAATTTGGCTGCTAACTTTTTTTTGTTTCATACCTATTGAAAGACCACAAATTCACTATATTATTTTAGTTACATATATACTACCCTAGGTCGAAAAATTTAAATGGATGCTTTGCTCGTAATGTTGCTACATAGTCCACCCAAAGTTTCTGTGATACTCTCATCGAAGGCATAGTGATAGACACATTTTCTTATAGTGCCTAATACACCACAAATACTGACAGGTACTCTACTGGTACGGGAGTTACGGGTGGCAGTGCATTGATACACGAATTTTATTCTAGAGAAGTTGCAAACCCTATTCATCTGACCGTTGATACTGGATTTAACAATGGTGAAGGAACAATAAAAGCCTATATCTCTGTCAATTTGTCCCTCGGAGATAGACAGCTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGAATGGTCGAAGCTGAGAGACTTGGATGTATGAACTTATTCCACGCTCATGTTTTACTTTCATTATTGAAGTGTCTAAGCTGCACAATCTATGTCATATACACATATACGCACATTCATTTTTCATTGACATAAATGCATGCACAAAAGTTTAGGTTGCCTCATTGACGGCTGTATGAAATATTTGATCCTTGAACTTTTTGAATATCCCCGACATATGTTAGAATAACATTAGCTTGGTATGATACGGATGTAAATATTCCTATTTTGTAGCTTTGCTGGTTTTTGTTCACATATGAACATAGATTGTGAATTTTTTGCCCTTAAGCCTTGTGGCAGTTATTAATGTATCGAGATGGAGATGCGTCTTTGTTGTTTTTTGTATGAGTGTGGTTGTTTTTGTTTGTTAATCCTGTCCAATCAATTTCAAAACTTTCTTCAAGTCAGTTTTCTGTTAACAGTTGATATACTGAAGACAACTTCTGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATCGACGATATTTACAAATATGTTGATAACGTTGTGGTGAGTGACGTTTGGATCTTCTACTTTTTTTAGAAATAGTCTTTTGTTTGCTTATGTTACTACTACTCTCTCAGGAAGGGCATGTTGAGGCAGACAACACGATAGGGAGATTTCTTGCTGACACTGTAGCCTCTCTTCCAAAACTGTCGCCAGCTGCTTTCGATAAGCTGATGAATGACAACGTGCAGGTATGGTTATTCTATCATAGCTTATATATTTTGATTCTCTGAAGTAGAGGCTGCAATATTAGTTGAATATTAAGGCCCCATTTGATAACTCTTTGTTTTGTCATTACCCCTTAGGAGTGTTTTTAAAATCCTAGTTATGTTTTGAAAACTAAAAAAGAACATGGTTTAATTTTTGCAAATTGTGGGGAGATAAATCCAATTTTCAAGAACTTAAAATAAAAAAACACCAAATTGTTATCAAGAGGGTGGTTAAATTATGAGTTATTATTTGAGTTTGGTGTCTCGTTAATGGATTGTCCATTTATCTCCCATTCTCACTTCTTTCCAGGACCATTTGCTGTTGCTGTATTTATCAAGTATCACCAGAACACAGCTGAGCTTGGCTGAAAAGTTGAATACGGCTGCTCAGATTCTGTAACTTCTTCAACCGATTTTGCGTGTTATTTATTTGGTGATTGACCAAAAATCTAAGAATTCGGGTACTTAGTCCTACGAAATGCTCCCTTCCCCTCCTGAAAACCTTTTTTTTTCTTTTAAATGTTGAGTTCATTGTCAGATTCTCTTATACTGCGCTGCTTTGTGGAATATATTGCCTAGTTTAACGGACGAGGGTTGTACTACCATTATTACCATCAAGAATATTGCCCAGATGCCCAATTTTCCCCCCATACTCTGGAGTAATAATTGGTCGTTTAAAGGCAACAATATGATCCACTTTCAATTTTCTATAAGATGAGATACTATTCCCGTTGGGGTTAGAAACAAAGCGCAACAATGTTTTTATCGATTAAGTAAACGAAAATTTCAGTGTTTGGTTTGTAAGATGTGTTAAGATTTTTGTAGTAAACCAAAATTTAAAGGGTTTATACTGTTGAGAAGCAATTCTATAAAGCAAACGAAAATATGAAGCAGGAGAAATGAAATGAAGAAGTGAGTATAATATTGTATAAGGTGGTTGTTTGGGTTGTGTGGAAGTGAGACGTGGAGGTGGATGATTG

mRNA sequence

ATGTGTCTTCTTCCAAAAATTGGAGGTAGAACAGAAACCCTAGCATCCGCCTCCGCTCCTTCGTCGTCTCTCTCGGCCTCCATTTTTACGGAGATAGGTTAATTCGAACTTCAAGCAATGGCAACGACGGAGAGCACGGTCTTGCAATTTTCACAGTCTTCTAACACGTTATCTGCGAAGGTTCACCCTCTGGTAATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCTGACCAGGCCGATCGAGTAATCGGTACTCTTCTTGGCTCGGTTTTACCTGATGGAACCGTTGATATTCGCAACTCTTATGCTGTTCCTCATAACGAGTTCTCGGATCAGGTTGCGCTGGATATTGACTATCATCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAGGTTATCGTTGGATGGTACTCTACTGGTACGGGAGTTACGGGTGGCAGTGCATTGATACACGAATTTTATTCTAGAGAAGTTGCAAACCCTATTCATCTGACCGTTGATACTGGATTTAACAATGGTGAAGGAACAATAAAAGCCTATATCTCTGTCAATTTGTCCCTCGGAGATAGACAGCTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGAATGGTCGAAGCTGAGAGACTTGGATTTGATATACTGAAGACAACTTCTGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATCGACGATATTTACAAATATGTTGATAACGTTGTGGAAGGGCATGTTGAGGCAGACAACACGATAGGGAGATTTCTTGCTGACACTGTAGCCTCTCTTCCAAAACTGTCGCCAGCTGCTTTCGATAAGCTGATGAATGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTATCAAGTATCACCAGAACACAGCTGAGCTTGGCTGAAAAGTTGAATACGGCTGCTCAGATTCTGTAACTTCTTCAACCGATTTTGCGTGTTATTTATTTGGTGATTGACCAAAAATCTAAGAATTCGGGTACTTAGTCCTACGAAATGCTCCCTTCCCCTCCTGAAAACCTTTTTTTTTCTTTTAAATGTTGAGTTCATTGTCAGATTCTCTTATACTGCGCTGCTTTGTGGAATATATTGCCTAGTTTAACGGACGAGGGTTGTACTACCATTATTACCATCAAGAATATTGCCCAGATGCCCAATTTTCCCCCCATACTCTGGAGTAATAATTGGTCGTTTAAAGGCAACAATATGATCCACTTTCAATTTTCTATAAGATGAGATACTATTCCCGTTGGGGTTAGAAACAAAGCGCAACAATGTTTTTATCGATTAAGTAAACGAAAATTTCAGTGTTTGGTTTGTAAGATGTGTTAAGATTTTTGTAGTAAACCAAAATTTAAAGGGTTTATACTGTTGAGAAGCAATTCTATAAAGCAAACGAAAATATGAAGCAGGAGAAATGAAATGAAGAAGTGAGTATAATATTGTATAAGGTGGTTGTTTGGGTTGTGTGGAAGTGAGACGTGGAGGTGGATGATTG

Coding sequence (CDS)

ATGGCAACGACGGAGAGCACGGTCTTGCAATTTTCACAGTCTTCTAACACGTTATCTGCGAAGGTTCACCCTCTGGTAATCTTCAACATTTGTGATTGCTATGTGAGGCGCCCTGACCAGGCCGATCGAGTAATCGGTACTCTTCTTGGCTCGGTTTTACCTGATGGAACCGTTGATATTCGCAACTCTTATGCTGTTCCTCATAACGAGTTCTCGGATCAGGTTGCGCTGGATATTGACTATCATCACAATATGTTAAGTTCCCACCAAAAAGTTAATCCAAAGGAGGTTATCGTTGGATGGTACTCTACTGGTACGGGAGTTACGGGTGGCAGTGCATTGATACACGAATTTTATTCTAGAGAAGTTGCAAACCCTATTCATCTGACCGTTGATACTGGATTTAACAATGGTGAAGGAACAATAAAAGCCTATATCTCTGTCAATTTGTCCCTCGGAGATAGACAGCTTGCTGCTCAGTTTCAAGAAATTCCTTTAGATCTTCGAATGGTCGAAGCTGAGAGACTTGGATTTGATATACTGAAGACAACTTCTGTTGATAAACTGCCAAATGATTTGGAAGGAATGGAAGCTTCAATGGAGAGATTGCTTGCCTTAATCGACGATATTTACAAATATGTTGATAACGTTGTGGAAGGGCATGTTGAGGCAGACAACACGATAGGGAGATTTCTTGCTGACACTGTAGCCTCTCTTCCAAAACTGTCGCCAGCTGCTTTCGATAAGCTGATGAATGACAACGTGCAGGACCATTTGCTGTTGCTGTATTTATCAAGTATCACCAGAACACAGCTGAGCTTGGCTGAAAAGTTGAATACGGCTGCTCAGATTCTGTAA

Protein sequence

MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Homology
[Close]
BLAST of Carg02116 vs. NCBI nr
Match: XP_023551601.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita pepo subsp. pepo] >KAG6578443.1 Eukaryotic translation initiation factor 3 subunit F, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016005.1 Eukaryotic translation initiation factor 3 subunit F [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 563.1 bits (1450), Expect = 1.3e-156
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. NCBI nr
Match: XP_022993463.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima])

HSP 1 Score: 562.0 bits (1447), Expect = 3.0e-156
Identity = 282/285 (98.95%), Postives = 285/285 (100.00%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGS+LPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSILPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFNNGEGTIKAYIS+NLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISINLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQVL 285

[Close]
BLAST of Carg02116 vs. NCBI nr
Match: XP_022939113.1 (eukaryotic translation initiation factor 3 subunit F-like [Cucurbita moschata])

HSP 1 Score: 560.5 bits (1443), Expect = 8.6e-156
Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRM+EAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMIEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. NCBI nr
Match: XP_008441439.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >KAA0055064.1 eukaryotic translation initiation factor 3 subunit F [Cucumis melo var. makuwa])

HSP 1 Score: 559.7 bits (1441), Expect = 1.5e-155
Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. NCBI nr
Match: XP_038884110.1 (eukaryotic translation initiation factor 3 subunit F [Benincasa hispida])

HSP 1 Score: 557.4 bits (1435), Expect = 7.3e-155
Identity = 282/285 (98.95%), Postives = 283/285 (99.30%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTENTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LK TSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKRTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. ExPASy Swiss-Prot
Match: O04202 (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=3702 GN=TIF3F1 PE=1 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 3.0e-127
Identity = 223/291 (76.63%), Postives = 254/291 (87.29%), Query Frame = 0 

Query: 2   ATTESTVLQFSQSSNT-------LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLP 61
           AT+E T+LQF   S+T       L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+LP
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSAL 121
           DGTVDIRNSYAVPHNE SDQVA+DIDYHHNML+SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAE 181
           IH+FY+REV NPIHLTVDTGF NGEGTIKA++S NLSLGDRQL A FQEIP+DLRMV+AE
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLAD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D+YKYVD+VV G +  DN IGRF+AD
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 TVASLPKLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
            VASLPKL P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]
BLAST of Carg02116 vs. ExPASy Swiss-Prot
Match: Q9DCH4 (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN=Eif3f PE=1 SV=2)

HSP 1 Score: 224.6 bits (571), Expect = 1.5e-57
Identity = 108/263 (41.06%), Postives = 172/263 (65.40%), Query Frame = 0 

Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDTG  +G  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTGLQHGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]
BLAST of Carg02116 vs. ExPASy Swiss-Prot
Match: O00303 (Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=EIF3F PE=1 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57
Identity = 108/263 (41.06%), Postives = 171/263 (65.02%), Query Frame = 0 

Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 93  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 152

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT   NG  
Sbjct: 153 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 212

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 213 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 272

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 273 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 332

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 333 NDLLMVTYLANLTQSQIALNEKL 354

[Close]
BLAST of Carg02116 vs. ExPASy Swiss-Prot
Match: Q4R5B8 (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9541 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57
Identity = 108/263 (41.06%), Postives = 171/263 (65.02%), Query Frame = 0 

Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT   NG  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]
BLAST of Carg02116 vs. ExPASy Swiss-Prot
Match: A5A6I3 (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 GN=EIF3F PE=2 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.9e-57
Identity = 108/263 (41.06%), Postives = 171/263 (65.02%), Query Frame = 0 

Query: 21  KVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVALDID 80
           ++HP+++ +I D Y RR + A RVIGTLLG+V    +V++ N ++VPHNE  D+VA+D++
Sbjct: 97  RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDME 156

Query: 81  YHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNNGEG 140
           +  NM   H+KV+P E+I+GWY+TG  +T  S LIHE+YSRE  NPIHLTVDT   NG  
Sbjct: 157 FAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNGRM 216

Query: 141 TIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDILKTT-----SVDKLPNDLEG 200
           +IKAY+S  + +  R +   F  + +     + ER+G D++  T      V  L +DL+ 
Sbjct: 217 SIKAYVSTLMGVPGRTMGVMFTPLTVKYAYYDTERIGVDLIMKTCFSPNRVIGLSSDLQQ 276

Query: 201 MEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMNDNV 260
           +  +  R+   +  + +Y ++V+ G V ADNT+GRFL   V  +PK+ P  F+ ++N N+
Sbjct: 277 VGGASARIQDALSTVLQYAEDVLSGKVSADNTVGRFLMSLVNQVPKIVPDDFETMLNSNI 336

Query: 261 QDHLLLLYLSSITRTQLSLAEKL 279
            D L++ YL+++T++Q++L EKL
Sbjct: 337 NDLLMVTYLANLTQSQIALNEKL 358

[Close]
BLAST of Carg02116 vs. ExPASy TrEMBL
Match: A0A6J1K2A6 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661 GN=LOC111489466 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.4e-156
Identity = 282/285 (98.95%), Postives = 285/285 (100.00%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGS+LPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSILPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFNNGEGTIKAYIS+NLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISINLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQVL 285

[Close]
BLAST of Carg02116 vs. ExPASy TrEMBL
Match: A0A6J1FKR8 (Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=3662 GN=LOC111445113 PE=3 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 4.2e-156
Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTG GVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGMGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRM+EAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMIEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. ExPASy TrEMBL
Match: A0A5A7UIS5 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G002360 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.1e-156
Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. ExPASy TrEMBL
Match: A0A1S3B471 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=LOC103485557 PE=3 SV=1)

HSP 1 Score: 559.7 bits (1441), Expect = 7.1e-156
Identity = 283/285 (99.30%), Postives = 284/285 (99.65%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. ExPASy TrEMBL
Match: A0A0A0K7P9 (Eukaryotic translation initiation factor 3 subunit F OS=Cucumis sativus OX=3659 GN=Csa_6G010020 PE=3 SV=1)

HSP 1 Score: 557.4 bits (1435), Expect = 3.5e-155
Identity = 281/285 (98.60%), Postives = 283/285 (99.30%), Query Frame = 0 

Query: 1   MATTESTVLQFSQSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60
           MATTE+TVLQFS SSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI
Sbjct: 1   MATTETTVLQFSHSSNTLSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLPDGTVDI 60

Query: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120
           RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS
Sbjct: 61  RNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYS 120

Query: 121 REVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180
           REVANPIHLTVDTGF NGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI
Sbjct: 121 REVANPIHLTVDTGFKNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDI 180

Query: 181 LKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240
           LKTTS+DKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP
Sbjct: 181 LKTTSIDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLP 240

Query: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
           KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL
Sbjct: 241 KLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 285

[Close]
BLAST of Carg02116 vs. TAIR 10
Match: AT2G39990.1 (eukaryotic translation initiation factor 2 )

HSP 1 Score: 456.1 bits (1172), Expect = 2.1e-128
Identity = 223/291 (76.63%), Postives = 254/291 (87.29%), Query Frame = 0 

Query: 2   ATTESTVLQFSQSSNT-------LSAKVHPLVIFNICDCYVRRPDQADRVIGTLLGSVLP 61
           AT+E T+LQF   S+T       L+A++HPLVIFN+CDC+VRRPD A+RVIGTLLGS+LP
Sbjct: 3   ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILP 62

Query: 62  DGTVDIRNSYAVPHNEFSDQVALDIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSAL 121
           DGTVDIRNSYAVPHNE SDQVA+DIDYHHNML+SH KVN KE IVGWYSTG GV GGS+L
Sbjct: 63  DGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSL 122

Query: 122 IHEFYSREVANPIHLTVDTGFNNGEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAE 181
           IH+FY+REV NPIHLTVDTGF NGEGTIKA++S NLSLGDRQL A FQEIP+DLRMV+AE
Sbjct: 123 IHDFYAREVPNPIHLTVDTGFTNGEGTIKAFVSSNLSLGDRQLVAHFQEIPVDLRMVDAE 182

Query: 182 RLGFDILKTTSVDKLPNDLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLAD 241
           R+GFD+LK TSVDKLPNDLEGME +MERLL LI+D+YKYVD+VV G +  DN IGRF+AD
Sbjct: 183 RVGFDVLKATSVDKLPNDLEGMELTMERLLTLINDVYKYVDSVVGGQIAPDNNIGRFIAD 242

Query: 242 TVASLPKLSPAAFDKLMNDNVQDHLLLLYLSSITRTQLSLAEKLNTAAQIL 286
            VASLPKL P  FD L+ND++QD LLLLYLSSITRTQLSLAEKLNTAAQ+L
Sbjct: 243 AVASLPKLPPQVFDNLVNDSLQDQLLLLYLSSITRTQLSLAEKLNTAAQML 293

[Close]
BLAST of Carg02116 vs. TAIR 10
Match: AT3G11270.2 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-30
Identity = 86/266 (32.33%), Postives = 135/266 (50.75%), Query Frame = 0 

Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNN 141
           D +YH +M    +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D     
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDIL----KTTSVDKLPNDL 201
                KAY +V  +   +     F  +P ++   E E +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQQV-FVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMND 261
                +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K    
Sbjct: 199 TAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFAV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHSLIN 282

[Close]
BLAST of Carg02116 vs. TAIR 10
Match: AT3G11270.1 (Mov34/MPN/PAD-1 family protein )

HSP 1 Score: 129.0 bits (323), Expect = 5.9e-30
Identity = 87/268 (32.46%), Postives = 136/268 (50.75%), Query Frame = 0 

Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    GTVD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDTSKRVVGVLLGS-SSRGTVDVTNSYAVPFEEDDKDTSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNN 141
           D +YH +M    +++N KE IVGWYSTG  +      +H  ++  V NP+ + +D     
Sbjct: 79  DHNYHESMFHMFKRINAKEHIVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQ--FQEIPLDLRMVEAERLGFDIL----KTTSVDKLPN 201
                KAY +V     +    +Q  F  +P ++   E E +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQQVFVHVPTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLM 261
           ++     +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K  
Sbjct: 199 EVTAKLTALKGLDARLREIRTYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
                D +L++YLSS+ R+ ++L   +N
Sbjct: 259 AVKTNDMMLVIYLSSLIRSVIALHSLIN 285

[Close]
BLAST of Carg02116 vs. TAIR 10
Match: AT5G05780.2 (RP non-ATPase subunit 8A )

HSP 1 Score: 125.6 bits (314), Expect = 6.6e-29
Identity = 83/266 (31.20%), Postives = 134/266 (50.38%), Query Frame = 0 

Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNN 141
           D +YH +M    +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D     
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQFQEIPLDLRMVEAERLGFDIL----KTTSVDKLPNDL 201
                KAY +V  +   +     F  +  ++   E E +G + L    K T++  L  ++
Sbjct: 139 LGIPTKAYYAVEENATQKSQKV-FVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLATEV 198

Query: 202 EGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLMND 261
                +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K  + 
Sbjct: 199 TAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAFSV 258

Query: 262 NVQDHLLLLYLSSITRTQLSLAEKLN 280
              D +L++YLSS+ R+ ++L   +N
Sbjct: 259 KTNDMMLVIYLSSLIRSVIALHNLIN 282

[Close]
BLAST of Carg02116 vs. TAIR 10
Match: AT5G05780.1 (RP non-ATPase subunit 8A )

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-28
Identity = 84/268 (31.34%), Postives = 135/268 (50.37%), Query Frame = 0 

Query: 22  VHPLVIFNICDCYVR-RPDQADRVIGTLLGSVLPDGTVDIRNSYAVPHNEFSDQVA---L 81
           VHPLV+ +I D Y R   D + RV+G LLGS    G VD+ NSYAVP  E     +   L
Sbjct: 19  VHPLVLLSIVDHYNRVAKDSSKRVVGVLLGS-SSRGVVDVTNSYAVPFEEDDKDPSIWFL 78

Query: 82  DIDYHHNMLSSHQKVNPKEVIVGWYSTGTGVTGGSALIHEFYSREVANPIHLTVDTGFNN 141
           D +YH +M    +++N KE +VGWYSTG  +      +H  ++  V NP+ + +D     
Sbjct: 79  DHNYHESMFHMFKRINAKEHVVGWYSTGPKLRENDLDVHALFNGYVPNPVLVIIDVQPKE 138

Query: 142 GEGTIKAYISVNLSLGDRQLAAQ--FQEIPLDLRMVEAERLGFDIL----KTTSVDKLPN 201
                KAY +V     +    +Q  F  +  ++   E E +G + L    K T++  L  
Sbjct: 139 LGIPTKAYYAVEEVKENATQKSQKVFVHVSTEIAAHEVEEIGVEHLLRDVKDTTISTLAT 198

Query: 202 DLEGMEASMERLLALIDDIYKYVDNVVEGHVEADNTIGRFLADTVASLPKLSPAAFDKLM 261
           ++     +++ L A + +I  Y+D V+EG +  ++ I   L D    LP L+     K  
Sbjct: 199 EVTAKLTALKGLDARLREIRSYLDLVIEGKLPLNHEILYHLQDVFNLLPNLNVNELVKAF 258

Query: 262 NDNVQDHLLLLYLSSITRTQLSLAEKLN 280
           +    D +L++YLSS+ R+ ++L   +N
Sbjct: 259 SVKTNDMMLVIYLSSLIRSVIALHNLIN 285

The following BLAST results are available for this feature:
BLAST of Carg02116 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023551601.11.3e-156100.00eukaryotic translation initiation factor 3 subunit F-like [Cucurbita pepo subsp.... [more]
XP_022993463.13.0e-15698.95eukaryotic translation initiation factor 3 subunit F-like [Cucurbita maxima][more]
XP_022939113.18.6e-15699.30eukaryotic translation initiation factor 3 subunit F-like [Cucurbita moschata][more]
XP_008441439.11.5e-15599.30PREDICTED: eukaryotic translation initiation factor 3 subunit F [Cucumis melo] >... [more]
XP_038884110.17.3e-15598.95eukaryotic translation initiation factor 3 subunit F [Benincasa hispida][more]
BLAST of Carg02116 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O042023.0e-12776.63Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana OX=... [more]
Q9DCH41.5e-5741.06Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus OX=10090 GN... [more]
O003031.9e-5741.06Eukaryotic translation initiation factor 3 subunit F OS=Homo sapiens OX=9606 GN=... [more]
Q4R5B81.9e-5741.06Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis OX=9... [more]
A5A6I31.9e-5741.06Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes OX=9598 ... [more]
BLAST of Carg02116 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K2A61.4e-15698.95Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita maxima OX=3661... [more]
A0A6J1FKR84.2e-15699.30Eukaryotic translation initiation factor 3 subunit F OS=Cucurbita moschata OX=36... [more]
A0A5A7UIS57.1e-15699.30Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo var. makuwa... [more]
A0A1S3B4717.1e-15699.30Eukaryotic translation initiation factor 3 subunit F OS=Cucumis melo OX=3656 GN=... [more]
A0A0A0K7P93.5e-15598.60Eukaryotic translation initiation factor 3 subunit F OS=Cucumis sativus OX=3659 ... [more]
BLAST of Carg02116 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G39990.12.1e-12876.63eukaryotic translation initiation factor 2 [more]
AT3G11270.23.5e-3032.33Mov34/MPN/PAD-1 family protein [more]
AT3G11270.15.9e-3032.46Mov34/MPN/PAD-1 family protein [more]
AT5G05780.26.6e-2931.20RP non-ATPase subunit 8A [more]
AT5G05780.11.1e-2831.34RP non-ATPase subunit 8A [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000555JAB1/MPN/MOV34 metalloenzyme domainSMARTSM00232pad1_6coord: 19..150
e-value: 3.1E-31
score: 119.8
IPR000555JAB1/MPN/MOV34 metalloenzyme domainPFAMPF01398JABcoord: 18..121
e-value: 4.8E-22
score: 78.2
NoneNo IPR availableGENE3D3.40.140.10Cytidine Deaminase, domain 2coord: 7..186
e-value: 9.5E-50
score: 170.4
NoneNo IPR availablePANTHERPTHR10540EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATEDcoord: 17..284
IPR024969Rpn11/EIF3F, C-terminalPFAMPF13012MitMem_regcoord: 172..278
e-value: 7.3E-24
score: 84.3
IPR027531Eukaryotic translation initiation factor 3 subunit FPANTHERPTHR10540:SF6EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Fcoord: 17..284
IPR027531Eukaryotic translation initiation factor 3 subunit FHAMAPMF_03005eIF3fcoord: 18..281
score: 37.090408
IPR027531Eukaryotic translation initiation factor 3 subunit FCDDcd08064MPN_eIF3fcoord: 21..278
e-value: 5.12974E-133
score: 375.39
IPR037518MPN domainPROSITEPS50249MPNcoord: 20..151
score: 30.248503

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg02116-RACarg02116-RAmRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
biological_process GO:0006508 proteolysis
biological_process GO:0006413 translational initiation
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0071541 eukaryotic translation initiation factor 3 complex, eIF3m
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
molecular_function GO:0070122 isopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0031369 translation initiation factor binding
molecular_function GO:0005515 protein binding