Carg02115 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg02115
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	WUSCHEL-related homeobox 5-like
Location	Carg_Chr15: 747943 .. 748679 (-)
RNA-Seq Expression	Carg02115
Synteny	Carg02115

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATGGGGTTTGTTCTAGAATTTACGTAAAAGGGGGCGGATGCGGCGGAGAGGGTGGCGGTGGCGGAGGTGGAAAGGGAAGTGGGAGTAGTAAATGTGGGAGATGGAATCCAACTGCAGAACAAGTAAAGGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATCTCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTCTACTGGTTTCAGAATCATAAAGCTCGTGAGAGACAAAAGCGTCGCAAAGTTTCTCTTTCTCTTGATCACTCTCAACAACAGCAGCATTTCCTTCATTCTCTTCATCTCTCTAATGACCACAACAACAACAACAACAACATTCCACCCTCTAACCGTATGTTTCTCACCTCCTTTCTATCCATTTCTGGTTCTAAAAACACGAATCTGGGTTGAGTTTTGTTTCATGGTTTTGTGTTGTGTTCTTTCTGGTTTGAGCAGACTTTGCAGACCAGTCGAGCACAAATAAGGGTATAATGGAGTTGGAGCCAGAAAGAATGATGAAAACGCTTCAACTTTTTCCACTAAACTCCATTGATGAAACACAAGGATCAGATGATTATCATCAGTTCAGAGTAGATGGGAAGCAGTTCGAGGACGCAACATCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCGCCATTGGATCTTCGTTTAAGCTTTCTGTAG

mRNA sequence

ATGGAGGATGGGGTTTGTTCTAGAATTTACGTAAAAGGGGGCGGATGCGGCGGAGAGGGTGGCGGTGGCGGAGGTGGAAAGGGAAGTGGGAGTAGTAAATGTGGGAGATGGAATCCAACTGCAGAACAAGTAAAGGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATCTCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTCTACTGGTTTCAGAATCATAAAGCTCGTGAGAGACAAAAGCGTCGCAAAGTTTCTCTTTCTCTTGATCACTCTCAACAACAGCAGCATTTCCTTCATTCTCTTCATCTCTCTAATGACCACAACAACAACAACAACAACATTCCACCCTCTAACCGTATGTTTCTCACCTCCTTTCTATCCATTTCTGACTTTGCAGACCAGTCGAGCACAAATAAGGGTATAATGGAGTTGGAGCCAGAAAGAATGATGAAAACGCTTCAACTTTTTCCACTAAACTCCATTGATGAAACACAAGGATCAGATGATTATCATCAGTTCAGAGTAGATGGGAAGCAGTTCGAGGACGCAACATCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCGCCATTGGATCTTCGTTTAAGCTTTCTGTAG

Coding sequence (CDS)

ATGGAGGATGGGGTTTGTTCTAGAATTTACGTAAAAGGGGGCGGATGCGGCGGAGAGGGTGGCGGTGGCGGAGGTGGAAAGGGAAGTGGGAGTAGTAAATGTGGGAGATGGAATCCAACTGCAGAACAAGTAAAGGTGCTGACAGAGCTGTTCAGGTCAGGGCTTAGAACTCCGAGTAGCGATCAGATTCAGAAAATCTCTCATCAGCTCAGCTTTTACGGCAAGATCGAGAGCAAGAATGTGTTCTACTGGTTTCAGAATCATAAAGCTCGTGAGAGACAAAAGCGTCGCAAAGTTTCTCTTTCTCTTGATCACTCTCAACAACAGCAGCATTTCCTTCATTCTCTTCATCTCTCTAATGACCACAACAACAACAACAACAACATTCCACCCTCTAACCGTATGTTTCTCACCTCCTTTCTATCCATTTCTGACTTTGCAGACCAGTCGAGCACAAATAAGGGTATAATGGAGTTGGAGCCAGAAAGAATGATGAAAACGCTTCAACTTTTTCCACTAAACTCCATTGATGAAACACAAGGATCAGATGATTATCATCAGTTCAGAGTAGATGGGAAGCAGTTCGAGGACGCAACATCTTTCACCTACAAAATAGAGACAAAAATGGATCATCCGCCATTGGATCTTCGTTTAAGCTTTCTGTAG

Protein sequence

MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSNDHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL

Homology

[Close]

BLAST of Carg02115 vs. NCBI nr
Match: KAG7016004.1 (WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.0 bits (1120), Expect = 1.9e-118
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN
Sbjct: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120

Query: 121 DHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQ 180
           DHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQ
Sbjct: 121 DHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQ 180

Query: 181 GSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           GSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 GSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 221

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BLAST of Carg02115 vs. NCBI nr
Match: KAG6578442.1 (WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 405.6 bits (1041), Expect = 2.7e-109
Identity = 209/221 (94.57%), Postives = 209/221 (94.57%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 8   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN
Sbjct: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 127

Query: 121 DHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQ 180
           DHNNNNNNIPPSN            FADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQ
Sbjct: 128 DHNNNNNNIPPSNH-----------FADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQ 187

Query: 181 GSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           GSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 188 GSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 217

[Close]

BLAST of Carg02115 vs. NCBI nr
Match: XP_022939921.1 (WUSCHEL-related homeobox 5-like [Cucurbita moschata])

HSP 1 Score: 394.8 bits (1013), Expect = 4.8e-106
Identity = 206/222 (92.79%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           MEDGVCSRIYVKGGGC GEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 8   MEDGVCSRIYVKGGGCSGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS QQQHFLH LHLSN
Sbjct: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFLHPLHLSN 127

Query: 121 DHNNNNNN-IPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDET 180
           DHNNNNNN IPPSN            FADQSSTNKGIMELEPERMMKTLQLFPLNSIDET
Sbjct: 128 DHNNNNNNIIPPSNH-----------FADQSSTNKGIMELEPERMMKTLQLFPLNSIDET 187

Query: 181 QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 188 QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 218

[Close]

BLAST of Carg02115 vs. NCBI nr
Match: XP_023549507.1 (WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.1 bits (1006), Expect = 3.1e-105
Identity = 204/224 (91.07%), Postives = 206/224 (91.96%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 8   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS QQQHFLH LHLSN
Sbjct: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFLHPLHLSN 127

Query: 121 DHNNNNNN---IPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSID 180
           DHNNNNNN   IPP+N            FADQSSTNKGIMELEPERMMKTLQLFPLNSID
Sbjct: 128 DHNNNNNNNNIIPPTNH-----------FADQSSTNKGIMELEPERMMKTLQLFPLNSID 187

Query: 181 ETQGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           ETQGSDDYHQFRVDGK +EDATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 188 ETQGSDDYHQFRVDGKHYEDATSFTYKIETKMDHPPLDLRLSFL 220

[Close]

BLAST of Carg02115 vs. NCBI nr
Match: XP_022993526.1 (WUSCHEL-related homeobox 5-like [Cucurbita maxima])

HSP 1 Score: 384.0 bits (985), Expect = 8.5e-103
Identity = 200/222 (90.09%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS Q QHFLH LHLSN
Sbjct: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN 120

Query: 121 DHNNNNNN-IPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDET 180
           DH++NNNN IPP+N            FADQSS NKGIMELEPERMMKTLQLFPLNSIDET
Sbjct: 121 DHHHNNNNIIPPTNH-----------FADQSSPNKGIMELEPERMMKTLQLFPLNSIDET 180

Query: 181 QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           QGSDDYHQFRVDGKQ+E ATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 QGSDDYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 211

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BLAST of Carg02115 vs. ExPASy Swiss-Prot
Match: Q8H1D2 (WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.9e-35
Identity = 99/219 (45.21%), Postives = 128/219 (58.45%), Query Frame = 0


Query: 11  VKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQL 70
           VKG    G   GG G      +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS +L
Sbjct: 5   VKGRSLRGNNNGGTG------TKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTEL 64

Query: 71  SFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSNDHNNNNNNIP 130
           SFYGKIESKNVFYWFQNHKARERQKRRK+S+  DH   Q                     
Sbjct: 65  SFYGKIESKNVFYWFQNHKARERQKRRKISIDFDHHHHQ--------------------- 124

Query: 131 PSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV 190
           PS R        + + +++          E E++++TLQLFP+NS +++    D  + R 
Sbjct: 125 PSTR-------DVFEISEEDCQ-------EEEKVIETLQLFPVNSFEDSNSKVDKMRARG 182

Query: 191 DGKQFE-----DATSFT--YKIETKMDH-PPLDLRLSFL 222
           + +  E       TSF+       +M+H PPLDLRLSFL
Sbjct: 185 NNQYREYIRETTTTSFSPYSSCGAEMEHPPPLDLRLSFL 182

[Close]

BLAST of Carg02115 vs. ExPASy Swiss-Prot
Match: Q9FFK0 (WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 9.4e-28
Identity = 68/95 (71.58%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 14  GGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFY 73
           G C    GGGG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS +LSFY
Sbjct: 12  GLCNNNNGGGGTG-----AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFY 71

Query: 74  GKIESKNVFYWFQNHKARERQKRRKVS-LSLDHSQ 108
           GKIESKNVFYWFQNHKARERQK RK+S +  DH Q
Sbjct: 72  GKIESKNVFYWFQNHKARERQKCRKISTVKFDHRQ 101

[Close]

BLAST of Carg02115 vs. ExPASy Swiss-Prot
Match: Q8W0F1 (WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.4e-25
Identity = 85/194 (43.81%), Postives = 107/194 (55.15%), Query Frame = 0


Query: 33  KCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARE 92
           KCGRWNPTAEQVKVLTELFR+GLRTPS++QIQ+IS  LS +GK+ESKNVFYWFQNHKARE
Sbjct: 11  KCGRWNPTAEQVKVLTELFRAGLRTPSTEQIQRISTHLSAFGKVESKNVFYWFQNHKARE 70

Query: 93  R---QKRRKVSLSLDHSQQQQHFLHSLHLSNDHNNNNNNIPPSNRMFLTSF-----LSIS 152
           R   +KRR+ + S D          + H   + + +    PP ++    S+     L   
Sbjct: 71  RHHHKKRRRGASSPDSGSNDDDGRAAAH---EGDADLVLQPPESKREARSYGHHHRLMTC 130

Query: 153 DFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRVDGKQFEDATSFTYK 212
              D   T    M   P R ++TL+LFPL S D       Y    V G   E     ++ 
Sbjct: 131 YVRDVVETE--AMWERPTREVETLELFPLKSYDLEVDKVRY----VRGGGGEQCREISFF 190

Query: 213 IETKMDHPPLDLRL 219
                  PPL+LRL
Sbjct: 191 DVAAGRDPPLELRL 195

[Close]

BLAST of Carg02115 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-20
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 36  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 95
           RWNPT +Q++VL EL+R G RTPS+D IQ+I+ QL  YGKIE KNVFYWFQNHKARERQK
Sbjct: 76  RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135

Query: 96  RRK 99
           RR+
Sbjct: 136 RRR 138

[Close]

BLAST of Carg02115 vs. ExPASy Swiss-Prot
Match: Q25AM2 (WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.4e-20
Identity = 43/66 (65.15%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 36  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 95
           RWNP+AEQ+KVL  L+R G+RTP+S QI++I+ +L  YG+IE KNVFYWFQNHKARERQK
Sbjct: 92  RWNPSAEQIKVLEMLYRGGMRTPNSVQIERITEELGKYGRIEGKNVFYWFQNHKARERQK 151

Query: 96  RRKVSL 102
           +++ +L
Sbjct: 152 QKRAAL 157

[Close]

BLAST of Carg02115 vs. ExPASy TrEMBL
Match: A0A6J1FH52 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE=3 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.3e-106
Identity = 206/222 (92.79%), Postives = 206/222 (92.79%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           MEDGVCSRIYVKGGGC GEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 8   MEDGVCSRIYVKGGGCSGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 67

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS QQQHFLH LHLSN
Sbjct: 68  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQQQHFLHPLHLSN 127

Query: 121 DHNNNNNN-IPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDET 180
           DHNNNNNN IPPSN            FADQSSTNKGIMELEPERMMKTLQLFPLNSIDET
Sbjct: 128 DHNNNNNNIIPPSNH-----------FADQSSTNKGIMELEPERMMKTLQLFPLNSIDET 187

Query: 181 QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 188 QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 218

[Close]

BLAST of Carg02115 vs. ExPASy TrEMBL
Match: A0A6J1JWK4 (WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 4.1e-103
Identity = 200/222 (90.09%), Postives = 204/222 (91.89%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSN 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS Q QHFLH LHLSN
Sbjct: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSHQHQHFLHPLHLSN 120

Query: 121 DHNNNNNN-IPPSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDET 180
           DH++NNNN IPP+N            FADQSS NKGIMELEPERMMKTLQLFPLNSIDET
Sbjct: 121 DHHHNNNNIIPPTNH-----------FADQSSPNKGIMELEPERMMKTLQLFPLNSIDET 180

Query: 181 QGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           QGSDDYHQFRVDGKQ+E ATSFTYKIETKMDHPPLDLRLSFL
Sbjct: 181 QGSDDYHQFRVDGKQYEGATSFTYKIETKMDHPPLDLRLSFL 211

[Close]

BLAST of Carg02115 vs. ExPASy TrEMBL
Match: A0A5A7UN53 (WUSCHEL-related homeobox 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G002150 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.0e-77
Identity = 170/225 (75.56%), Postives = 183/225 (81.33%), Query Frame = 0


Query: 1   MEDGVCSRIYVK-GGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVK GGGC GE  GGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGE-SGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 61  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLS 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL      QQQHF+      
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSL-----PQQQHFI------ 120

Query: 121 NDHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNKGIM-ELEPERMMKTLQLFPLNS-ID 180
                    +PPS+        ++  FADQS+TNKGIM +LEPERMMKTLQLFPLNS ID
Sbjct: 121 ---------LPPSS--------NLQHFADQSTTNKGIMDQLEPERMMKTLQLFPLNSTID 180

Query: 181 ETQG-SDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           ETQG  +D H +RV+GKQ+EDAT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 181 ETQGLPEDNHHYRVNGKQYEDATAFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of Carg02115 vs. ExPASy TrEMBL
Match: A0A1S3B2Z9 (WUSCHEL-related homeobox 5 OS=Cucumis melo OX=3656 GN=LOC103485558 PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 3.0e-77
Identity = 170/225 (75.56%), Postives = 183/225 (81.33%), Query Frame = 0


Query: 1   MEDGVCSRIYVK-GGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60
           MEDGVCSRIYVK GGGC GE  GGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS
Sbjct: 1   MEDGVCSRIYVKGGGGCSGE-SGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPS 60

Query: 61  SDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLS 120
           SDQIQKISH LSFYGKIESKNVFYWFQNHKARERQKRRK+SL      QQQHF+      
Sbjct: 61  SDQIQKISHHLSFYGKIESKNVFYWFQNHKARERQKRRKLSL-----PQQQHFI------ 120

Query: 121 NDHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNKGIM-ELEPERMMKTLQLFPLNS-ID 180
                    +PPS+        ++  FADQS+TNKGIM +LEPERMMKTLQLFPLNS ID
Sbjct: 121 ---------LPPSS--------NLQHFADQSTTNKGIMDQLEPERMMKTLQLFPLNSTID 180

Query: 181 ETQG-SDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           ETQG  +D H +RV+GKQ+EDAT+FTYKIETKMDHPPLDLRLSFL
Sbjct: 181 ETQGLPEDNHHYRVNGKQYEDATAFTYKIETKMDHPPLDLRLSFL 196

[Close]

BLAST of Carg02115 vs. ExPASy TrEMBL
Match: A0A6J1GMY2 (WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE=3 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.8e-73
Identity = 161/228 (70.61%), Postives = 178/228 (78.07%), Query Frame = 0


Query: 1   MEDGVCSRIYVKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 60
           M++G+ SR YVK  G GG+ GGG  GKGS SSKCGRWNPTAEQVKVLTELFRSGLRTPSS
Sbjct: 7   MDEGISSRFYVKPAGGGGD-GGGVAGKGSMSSKCGRWNPTAEQVKVLTELFRSGLRTPSS 66

Query: 61  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHS------QQQQHFLH 120
           DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVS+SLDH+      QQQQHF+ 
Sbjct: 67  DQIQKISHQLSFYGKIESKNVFYWFQNHKARERQKRRKVSISLDHTHHHHHHQQQQHFI- 126

Query: 121 SLHLSNDHNNNNNNIPPSNRMFLTSFLSISDFADQSSTNK-GIMELEPERMMKTLQLFPL 180
                         +PP +  F           DQS+TNK G MELEPERMMKTLQLFPL
Sbjct: 127 --------------LPPCSNYFAD---------DQSTTNKGGTMELEPERMMKTLQLFPL 186

Query: 181 NSIDETQGSDDYHQFRVDGKQFEDATSFTYKIETKMDHPPLDLRLSFL 222
           NSI ET+G +D HQFRV+GKQ+E+AT+FTYKI TKM+HPPLDLRLSFL
Sbjct: 187 NSIGETEGDND-HQFRVNGKQYEEATAFTYKIGTKMEHPPLDLRLSFL 208

[Close]

BLAST of Carg02115 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 148.7 bits (374), Expect = 5.6e-36
Identity = 99/219 (45.21%), Postives = 128/219 (58.45%), Query Frame = 0


Query: 11  VKGGGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQL 70
           VKG    G   GG G      +KCGRWNPT EQ+K+LT+LFR+GLRTP++DQIQKIS +L
Sbjct: 5   VKGRSLRGNNNGGTG------TKCGRWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTEL 64

Query: 71  SFYGKIESKNVFYWFQNHKARERQKRRKVSLSLDHSQQQQHFLHSLHLSNDHNNNNNNIP 130
           SFYGKIESKNVFYWFQNHKARERQKRRK+S+  DH   Q                     
Sbjct: 65  SFYGKIESKNVFYWFQNHKARERQKRRKISIDFDHHHHQ--------------------- 124

Query: 131 PSNRMFLTSFLSISDFADQSSTNKGIMELEPERMMKTLQLFPLNSIDETQGSDDYHQFRV 190
           PS R        + + +++          E E++++TLQLFP+NS +++    D  + R 
Sbjct: 125 PSTR-------DVFEISEEDCQ-------EEEKVIETLQLFPVNSFEDSNSKVDKMRARG 182

Query: 191 DGKQFE-----DATSFT--YKIETKMDH-PPLDLRLSFL 222
           + +  E       TSF+       +M+H PPLDLRLSFL
Sbjct: 185 NNQYREYIRETTTTSFSPYSSCGAEMEHPPPLDLRLSFL 182

[Close]

BLAST of Carg02115 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 125.2 bits (313), Expect = 6.7e-29
Identity = 68/95 (71.58%), Postives = 77/95 (81.05%), Query Frame = 0


Query: 14  GGCGGEGGGGGGGKGSGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFY 73
           G C    GGGG G     +KCGRWNPT EQVK+LT+LF++GLRTPS+DQIQKIS +LSFY
Sbjct: 12  GLCNNNNGGGGTG-----AKCGRWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFY 71

Query: 74  GKIESKNVFYWFQNHKARERQKRRKVS-LSLDHSQ 108
           GKIESKNVFYWFQNHKARERQK RK+S +  DH Q
Sbjct: 72  GKIESKNVFYWFQNHKARERQKCRKISTVKFDHRQ 101

[Close]

BLAST of Carg02115 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 100.5 bits (249), Expect = 1.8e-21
Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 36  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 95
           RWNPT +Q++VL EL+R G RTPS+D IQ+I+ QL  YGKIE KNVFYWFQNHKARERQK
Sbjct: 76  RWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNHKARERQK 135

Query: 96  RRK 99
           RR+
Sbjct: 136 RRR 138

[Close]

BLAST of Carg02115 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.5e-20
Identity = 46/75 (61.33%), Postives = 58/75 (77.33%), Query Frame = 0


Query: 36  RWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNHKARERQK 95
           RW PT EQ+ +L E++RSG+RTP++ QIQ+I+  L+FYG+IE KNVFYWFQNHKAR+RQK
Sbjct: 8   RWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKARDRQK 67

Query: 96  RRKVSLSLDHSQQQQ 111
            RK      H QQ Q
Sbjct: 68  LRKKLAKQLHQQQHQ 82

[Close]

BLAST of Carg02115 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 92.8 bits (229), Expect = 3.7e-19
Identity = 40/70 (57.14%), Postives = 57/70 (81.43%), Query Frame = 0


Query: 29 SGSSKCGRWNPTAEQVKVLTELFRSGLRTPSSDQIQKISHQLSFYGKIESKNVFYWFQNH 88
          +G++   RWNPT +Q+ +L  L++ G+RTPS+DQIQ+I+ +L  YG IE KNVFYWFQNH
Sbjct: 7  AGTASSSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNH 66

Query: 89 KARERQKRRK 99
          KAR+RQK+++
Sbjct: 67 KARQRQKQKQ 76

The following BLAST results are available for this feature:

BLAST of Carg02115 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016004.1	1.9e-118	100.00	WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6578442.1	2.7e-109	94.57	WUSCHEL-related homeobox 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939921.1	4.8e-106	92.79	WUSCHEL-related homeobox 5-like [Cucurbita moschata]	[more]
XP_023549507.1	3.1e-105	91.07	WUSCHEL-related homeobox 5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022993526.1	8.5e-103	90.09	WUSCHEL-related homeobox 5-like [Cucurbita maxima]	[more]

BLAST of Carg02115 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H1D2	7.9e-35	45.21	WUSCHEL-related homeobox 5 OS=Arabidopsis thaliana OX=3702 GN=WOX5 PE=2 SV=1	[more]
Q9FFK0	9.4e-28	71.58	WUSCHEL-related homeobox 7 OS=Arabidopsis thaliana OX=3702 GN=WOX7 PE=2 SV=1	[more]
Q8W0F1	4.4e-25	43.81	WUSCHEL-related homeobox 9 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX9 PE=2...	[more]
Q6X7K0	2.5e-20	73.02	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q25AM2	9.4e-20	65.15	WUSCHEL-related homeobox 4 OS=Oryza sativa subsp. indica OX=39946 GN=WOX4 PE=3 S...	[more]

BLAST of Carg02115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FH52	2.3e-106	92.79	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111445643 PE...	[more]
A0A6J1JWK4	4.1e-103	90.09	WUSCHEL-related homeobox 5-like OS=Cucurbita maxima OX=3661 GN=LOC111489507 PE=3...	[more]
A0A5A7UN53	3.0e-77	75.56	WUSCHEL-related homeobox 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3B2Z9	3.0e-77	75.56	WUSCHEL-related homeobox 5 OS=Cucumis melo OX=3656 GN=LOC103485558 PE=3 SV=1	[more]
A0A6J1GMY2	5.8e-73	70.61	WUSCHEL-related homeobox 5-like OS=Cucurbita moschata OX=3662 GN=LOC111455970 PE...	[more]

BLAST of Carg02115 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11260.1	5.6e-36	45.21	WUSCHEL related homeobox 5	[more]
AT5G05770.1	6.7e-29	71.58	WUSCHEL related homeobox 7	[more]
AT3G18010.1	1.8e-21	73.02	WUSCHEL related homeobox 1	[more]
AT2G28610.1	1.5e-20	61.33	Homeodomain-like superfamily protein	[more]
AT5G59340.1	3.7e-19	57.14	WUSCHEL related homeobox 2	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 32..99 e-value: 2.0E-4 score: 30.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 34..94 e-value: 2.0E-18 score: 66.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 30..95 score: 11.401915
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 36..96 e-value: 4.37762E-5 score: 38.3785
None	No IPR available	GENE3D	1.10.10.60		coord: 33..101 e-value: 8.7E-10 score: 40.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..36
None	No IPR available	PANTHER	PTHR45940:SF3	WUSCHEL-RELATED HOMEOBOX 7	coord: 21..209
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 21..209
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 35..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02115-RA	Carg02115-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity