
Carg02099 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAGGGTTCTCAAACGTGCACCCGATCGGCGGCAAAAGATGGCACGTGGTTTATGCATGATCCACTGTGCAAAGTCCATCTTCAACGTCGCACAGGTGCCGTCACTGTCCTCTGTGACCGTGTCTCCGTGAGTTGTCCTTCCAAGCGAAGAAACGACCAACATTAGGGCTCAAAGCCAGAGGATTCGATCTTAGTCAATCTCCCGTCGATTCGTACCTTCGATGAATTTCTGAGGCCACCTAACAGTTTCACTTTTCCTCTTCCTTTCGGTATTTCGCTGTTTTCTTCTTTTGGTGCTTGATTGCTTTCTCCATGGACGAGACTTACATAAATCTCCCCACTAGCCATTTGCTTGGCTCAGTCCCTGTACGCACTTTCCAGGCGCCTTTGCTTGCTTCTTTTATTTTATCTACTTCTCAAGTTGACCTTTGATTGATGCTATTTGTATTAGGAAGTATTGAATGTCTGGGTCATTCTTCGCGATGATTGATCTGCTTCGCAATGTGATCGGTTGCGATTTTTTCATTACATTTTTTTTGTTTACTTGCATTTTAATATAATGAATAAGCTGGAAAGTGCTTGGTTTGGTTGCTTCCCGCGTGTATGTTATGCTGCTTTCAGAATTCATCGCAAGTAAAAGGAAAATGGAAGACTATTCGTTTGGGGCCACCGAGGTTTTTCTTTGCTAATTAGTATGGAGTCTTATCAGGAAATTATTGTTTACTTTGATATTTTCCGCCGTTGGTAGCACCTAAATAATGAACATTCATGAATAGTTATTGAATATGAGAGCAGTATCTATTTTATTTAGTAGGGAAATATGTTTGCTACTTCCTGTTGCGTCTTCTGAATGATGCCTCTTGCAATATATCTGGCAGTTGGCGTGTTTGTTTGTAGTGGCTATGTTCAACCGCCATCTAGTTTTTCTGGGCTGGATTTTTGAAGAGCTTGAATAAATATAGAACTGGCTAGATTTTGTTCCTCCTGGATTTAGAAGGTTAAAAATGCGTTTTGGTGAGAAGGGAGATTCAATGTTACCCCTATTTTATGCTTTATAATCAATGATAGCACTCCTCTTATACCAAGTAATGCAAGTTTTAGCTGCGGTTCCTAATATGCTTCTGTTTTTTTGTATGTTGGATTATTTGTAATTATTTTTTGGTTGCACCTTGAATCTATGTGTGTTTAAATGTTATCATGTTCTGTTTGGAGTTTGAAATTTATGACTTTCTTTATCTCTGTCTTCGTTTTCAAAGCTCCTTTGTCTACATATTTTTATGTATCCTTTTTTTGGTGGATCAATAGGCTGTAATCAATGAAGAGAAAGACGGCACAGACCATAAAAGTAAGAACGGATTCCAGTACCTTCTTCTTAGTAATCTTATTTCACTTTCTGTTTCATTAATAAGTAGCATTCAAAAAATTGATCTATTTCACTGTTTCATTTCACATAATTATCTCTGAGGAATGGCTTCTTAATTATATGCAGCACCAGAAGCAATTATGCAGACATTCCCTCCAACTAATGGAAGGGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAATGGTAATGCTTGTCATGTACTCCCAATTGGCTATACGATAGTGTTATGATCGGAGTGCAATTAGTGAAAATAATGATTAGAGATCATTCGTTCTGATTTTCCATTGCTTCTCTCAACTAGGGTTTTTATATTTACTTCTATAGATCTTCTAACTATTTAATGTGACATTTTTTCCAACGTACATGTGGTTCTTTGTTTGATCTAATTAATTTATTTCCCCTTCTAGCTAGTTTTGGACATACTGAAAGCAAAACATTAACTTATATGGGATTGAGATGTGTTTTTCGTTGTTTCAACTTATTAATCATTGCCTTTGTGTCTGAGATTTTCCTTTCTTGTTATCTTTTGATTATCGAGTGAAAATGTTGTATATCATGACTACTAGATGTTTTGACATTTATTTATTACTGCAGTACAAGGCTCTTGGACCTAATCCAAAGGTTTTTGTAAAATGCTTGGATATTGAAGGTGGAAGCCACCTTTTAGTTTCAAACCCCCCTTAGACACAGAAAAGATAGCAGGTTTTTGGATATTAGAAAGAAAACCTGTTCCAAAAAAAATAAACTGCGACGTGATAAGGCTCCTGAAGATCCAATCTATATCAAACATGCATTTTTATACGGGGTTGATTCTTTTCTTTTGGTGAACCATACAATTGACAACATTTATTTATGTGCAGATCCTCAGCCGCAACCATCAAGTAACTGGAAGGGAATGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACAGACACTGTCATGAGTAGATTGATTAGTTCCTTGTATCCCATTGGTGGAGATTTTTCTAGCAAGATCGATGCAAACCCTGATCTGTAAGTTTTTTTTTTTTTTTTCCTCTCTTAACCTTAATAATTTCTCTGTTTCTCTGATGACTATGGGATTATCTGTGAGATTTTGAACGCCTACCTTTTGGTGTCTTTTTTTCTTTTTCAAATTTATGCGCCTCTATCTGTTCATTCAAGAATCTATATGGATATCTTGTTTTTGAAACTAAATGGATTATCAAACTCCTTTTTATTGAATTTTGCTATGACTTAGATATGGGCTTGTGTGGGTCACCACTACATTGGTCTTTGTCCTTGCGGCATTTGGAAACTGCGCGACCTTCCTCATGCAAAAACAAAGTGATCACGGAGCTGCATGGAGCTTTGATGTCAGCTATGTGAATGTGGCGGCAGGGTCTGTTTATGGTTATGCGATTGTGGTTCCCACGGCATTTTACTTTTCGCTTCAGTACTTGGGGTCAAATTCTAACCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTGTAAGCTTCTGGAATCTTCACTGCAGTTCTGTTCTCCTTTTATCCATTCAACATAATTTCATACATGACTCTGCAGAATTTGAATTTTTTTTATATATTTTTATTTTGGTACTTAAGTTTCTTTTTTACTTCATTTATTTTCATATATTTTGAATTTCTGGTTCATAGCTTAGTAGATATTGTAAGGAGCATGCAAGAAGAAAGCAATGACTACTAAAGAATACTGTCGCCTTAGACTAGACGTTTGCATTTTCAGAGGACTTGCATGAGTTTTATTAGTGCAACGATCCATTTTATGGGTAATATAACTGCATGGTTCTTACATCTCTTTTCTTTTCCAGTTTCTGTTGCTCATCCCGGTTGAATTTCTGCGATGGTTCATCATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTACTTTGAACTTGAGGTCCTATATCGATGGAAACGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCCTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCAGACTCTCTCAGTTTGTTGCTGTCATCAGACCATCTATCTTTGCTTTGTTTCTGAGTGCTGACCTCTTAACTAAGGAACGATTCCCTCTTGATTGGTGTTGGTAGTTCTTTGCCTCGTAACTTGTGTGATGAATCACAGAAGCGGTCAACAGAGAACGACGTCGACGGTCATAGTTTTTGTGATTGGAAGTGATTGTTTTATCATAACAACAATCTCTAACATGCTCACGGTATTGTTTGCAGAGTGCGCAGATGGGCTTCCCTCTTTATGAATATTGTTTGAGGAGAGCGGAATCTGTTTTATCTTTCTTTGATTATAAATTTTCATCTTAGTATTCCACTCAAACACAGACGTCATTGTAAATAGATGTGGGAGAATGTACTTGTGATCACTGATGTAATGTGATTGATTGAATTTAAATACAAGTAGCAAAAATATGCCTCTATCTCAAGACTGGTTTTACGCCAATCCATCAACAGTCATT TAAAGGGTTCTCAAACGTGCACCCGATCGGCGGCAAAAGATGGCACGTGGTTTATGCATGATCCACTGTGCAAAGTCCATCTTCAACGTCGCACAGGTGCCGTCACTGTCCTCTGTGACCGTGTCTCCGTGAGTTGTCCTTCCAAGCGAAGAAACGACCAACATTAGGGCTCAAAGCCAGAGGATTCGATCTTAGTCAATCTCCCGTCGATTCGTACCTTCGATGAATTTCTGAGGCCACCTAACAGTTTCACTTTTCCTCTTCCTTTCGGTATTTCGCTGTTTTCTTCTTTTGGTGCTTGATTGCTTTCTCCATGGACGAGACTTACATAAATCTCCCCACTAGCCATTTGCTTGGCTCAGTCCCTGCTGTAATCAATGAAGAGAAAGACGGCACAGACCATAAAACACCAGAAGCAATTATGCAGACATTCCCTCCAACTAATGGAAGGGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAATGATCCTCAGCCGCAACCATCAAGTAACTGGAAGGGAATGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACAGACACTGTCATGAGTAGATTGATTAGTTCCTTGTATCCCATTGGTGGAGATTTTTCTAGCAAGATCGATGCAAACCCTGATCTATATGGGCTTGTGTGGGTCACCACTACATTGGTCTTTGTCCTTGCGGCATTTGGAAACTGCGCGACCTTCCTCATGCAAAAACAAAGTGATCACGGAGCTGCATGGAGCTTTGATGTCAGCTATGTGAATGTGGCGGCAGGGTCTGTTTATGGTTATGCGATTGTGGTTCCCACGGCATTTTACTTTTCGCTTCAGTACTTGGGGTCAAATTCTAACCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTTTTCTGTTGCTCATCCCGGTTGAATTTCTGCGATGGTTCATCATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTACTTTGAACTTGAGGTCCTATATCGATGGAAACGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCCTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGAGCAGACTCTCTCAGTTTGTTGCTGTCATCAGACCATCTATCTTTGCTTTGTTTCTGAGTGCTGACCTCTTAACTAAGGAACGATTCCCTCTTGATTGGTGTTGGTAGTTCTTTGCCTCGTAACTTGTGTGATGAATCACAGAAGCGGTCAACAGAGAACGACGTCGACGGTCATAGTTTTTGTGATTGGAAGTGATTGTTTTATCATAACAACAATCTCTAACATGCTCACGGTATTGTTTGCAGAGTGCGCAGATGGGCTTCCCTCTTTATGAATATTGTTTGAGGAGAGCGGAATCTGTTTTATCTTTCTTTGATTATAAATTTTCATCTTAGTATTCCACTCAAACACAGACGTCATTGTAAATAGATGTGGGAGAATGTACTTGTGATCACTGATGTAATGTGATTGATTGAATTTAAATACAAGTAGCAAAAATATGCCTCTATCTCAAGACTGGTTTTACGCCAATCCATCAACAGTCATT ATGGACGAGACTTACATAAATCTCCCCACTAGCCATTTGCTTGGCTCAGTCCCTGCTGTAATCAATGAAGAGAAAGACGGCACAGACCATAAAACACCAGAAGCAATTATGCAGACATTCCCTCCAACTAATGGAAGGGACAGAGGGAGAGGTTATCAAACTCTTGAAAGTCCAAATGATCCTCAGCCGCAACCATCAAGTAACTGGAAGGGAATGTTTAGTGTATCATCTTACACTCAATATTTCAATGTGGATACAGACACTGTCATGAGTAGATTGATTAGTTCCTTGTATCCCATTGGTGGAGATTTTTCTAGCAAGATCGATGCAAACCCTGATCTATATGGGCTTGTGTGGGTCACCACTACATTGGTCTTTGTCCTTGCGGCATTTGGAAACTGCGCGACCTTCCTCATGCAAAAACAAAGTGATCACGGAGCTGCATGGAGCTTTGATGTCAGCTATGTGAATGTGGCGGCAGGGTCTGTTTATGGTTATGCGATTGTGGTTCCCACGGCATTTTACTTTTCGCTTCAGTACTTGGGGTCAAATTCTAACCTCATAAGATTTTGGTGCTTGTGGGGATACTCTCTGTTCATTTTTATTCTGGCATCTTTTCTGTTGCTCATCCCGGTTGAATTTCTGCGATGGTTCATCATACTCCTTTCTGGTGCTGCCTCAGCAAGTTTTGTTACTTTGAACTTGAGGTCCTATATCGATGGAAACGATCTTTCGGTTCTGATAGTTGCTGCATTTTTCTTGCAAATGGCCTTGGCAATCTTCATCAAAGTGTGGTTCTTTCCTTGA MDETYINLPTSHLLGSVPAVINEEKDGTDHKTPEAIMQTFPPTNGRDRGRGYQTLESPNDPQPQPSSNWKGMFSVSSYTQYFNVDTDTVMSRLISSLYPIGGDFSSKIDANPDLYGLVWVTTTLVFVLAAFGNCATFLMQKQSDHGAAWSFDVSYVNVAAGSVYGYAIVVPTAFYFSLQYLGSNSNLIRFWCLWGYSLFIFILASFLLLIPVEFLRWFIILLSGAASASFVTLNLRSYIDGNDLSVLIVAAFFLQMALAIFIKVWFFP Homology
BLAST of Carg02099 vs. NCBI nr
Match: KAG7015988.1 (Protein YIPF1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 530.8 bits (1366), Expect = 6.9e-147 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of Carg02099 vs. NCBI nr
Match: XP_023550852.1 (protein YIPF1 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 525.0 bits (1351), Expect = 3.8e-145 Identity = 265/268 (98.88%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Carg02099 vs. NCBI nr
Match: XP_022939398.1 (protein YIPF1 homolog [Cucurbita moschata]) HSP 1 Score: 525.0 bits (1351), Expect = 3.8e-145 Identity = 266/268 (99.25%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Carg02099 vs. NCBI nr
Match: XP_022993754.1 (protein YIPF1 homolog [Cucurbita maxima]) HSP 1 Score: 512.3 bits (1318), Expect = 2.5e-141 Identity = 260/268 (97.01%), Postives = 262/268 (97.76%), Query Frame = 0
BLAST of Carg02099 vs. NCBI nr
Match: KAG6578425.1 (Protein YIPF1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 505.0 bits (1299), Expect = 4.0e-139 Identity = 256/264 (96.97%), Postives = 259/264 (98.11%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy Swiss-Prot
Match: Q54TS4 (Protein YIPF1 homolog OS=Dictyostelium discoideum OX=44689 GN=yipf1 PE=3 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22 Identity = 68/198 (34.34%), Postives = 111/198 (56.06%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy Swiss-Prot
Match: Q5RBL0 (Protein YIPF1 OS=Pongo abelii OX=9601 GN=YIPF1 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 3.8e-15 Identity = 63/201 (31.34%), Postives = 105/201 (52.24%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy Swiss-Prot
Match: Q9Y548 (Protein YIPF1 OS=Homo sapiens OX=9606 GN=YIPF1 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 8.5e-15 Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy Swiss-Prot
Match: Q9BWQ6 (Protein YIPF2 OS=Homo sapiens OX=9606 GN=YIPF2 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 8.5e-15 Identity = 71/217 (32.72%), Postives = 103/217 (47.47%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy Swiss-Prot
Match: Q5XIT3 (Protein YIPF2 OS=Rattus norvegicus OX=10116 GN=Yipf2 PE=2 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.2e-14 Identity = 69/219 (31.51%), Postives = 106/219 (48.40%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy TrEMBL
Match: A0A6J1FLJ3 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111445328 PE=3 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 1.8e-145 Identity = 266/268 (99.25%), Postives = 266/268 (99.25%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy TrEMBL
Match: A0A6J1K0Z8 (Protein YIP OS=Cucurbita maxima OX=3661 GN=LOC111489666 PE=3 SV=1) HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141 Identity = 260/268 (97.01%), Postives = 262/268 (97.76%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy TrEMBL
Match: A0A0A0K8E4 (Protein YIP OS=Cucumis sativus OX=3659 GN=Csa_6G008790 PE=3 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 5.7e-131 Identity = 241/270 (89.26%), Postives = 257/270 (95.19%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy TrEMBL
Match: A0A1S3B3D6 (Protein YIP OS=Cucumis melo OX=3656 GN=LOC103485530 PE=3 SV=1) HSP 1 Score: 469.5 bits (1207), Expect = 9.1e-129 Identity = 238/270 (88.15%), Postives = 255/270 (94.44%), Query Frame = 0
BLAST of Carg02099 vs. ExPASy TrEMBL
Match: A0A6J1H7J3 (Protein YIP OS=Cucurbita moschata OX=3662 GN=LOC111461208 PE=3 SV=1) HSP 1 Score: 469.2 bits (1206), Expect = 1.2e-128 Identity = 233/268 (86.94%), Postives = 254/268 (94.78%), Query Frame = 0
BLAST of Carg02099 vs. TAIR 10
Match: AT2G39805.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 348.2 bits (892), Expect = 5.9e-96 Identity = 176/276 (63.77%), Postives = 224/276 (81.16%), Query Frame = 0
BLAST of Carg02099 vs. TAIR 10
Match: AT2G39805.2 (Integral membrane Yip1 family protein ) HSP 1 Score: 346.7 bits (888), Expect = 1.7e-95 Identity = 176/277 (63.54%), Postives = 223/277 (80.51%), Query Frame = 0
BLAST of Carg02099 vs. TAIR 10
Match: AT5G27490.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 174.1 bits (440), Expect = 1.5e-43 Identity = 107/277 (38.63%), Postives = 160/277 (57.76%), Query Frame = 0
BLAST of Carg02099 vs. TAIR 10
Match: AT3G05280.1 (Integral membrane Yip1 family protein ) HSP 1 Score: 171.8 bits (434), Expect = 7.5e-43 Identity = 107/276 (38.77%), Postives = 161/276 (58.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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