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Carg01908 (gene) Silver-seed gourd (SMH-JMG-627) v2
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGAGGATCGCGAAGGTCCCGAGTCAGGGAGGTCGCTGAGATGGATGAGGCCTTGAAACGATGGACACTGGCCTCCGCTTCTACCAATCAAAATTCTAATGCCTTGGAGCATTCCGTTGGCGGTGCTGCTCGCTCAGATCGTTCGGTTCCTGCTGAACTGTCCGAGGATTCTATCACTCAGGTTGGTCGGTTCCTCCTTCGCGAAGACTTTCCGAATCCTAGAGGATGTAGTTTATTATTAATTTCAAGTCGTAGCTGTCTGTTATACTTGTCCGAATCATTCCACTTAACATCATGTTATTTGTGCGGTATTTGTTTCTGTTGGTGCTGATTTCTTGAAAGAATTCTCTAATAGCGTTTTCTAAGGCAGATAGAATAAAATCGCTTATGATGTCGTAAGTTGCATTTTCTTTTATACTTCCACTGATGGCTACATTGAGTGCACAGAGGTTGTAGTATAGGTAGTTTTTAAACTTGATTTCTTAGAAAAATCCTCTAATCGTTCTTTTGAACAAGGCAGATAGAATAAAATTGCTGATTGAGTCGTAGGTTTTCTTTCCTTTCCTTTTATTTTCTGTATGCATTTATGTTTAAGTTGAGTTCTCAGAGGCGGTATTCAAAATAGTTTTTCCTCTAGGTAGATAAAATAAATAGCTGAGTGTATCATAGGTTTTATTTTCTACATGCATTTATGTCTAATTGAGTTCTCAGAGATGGTGTTCTAAGTAGCTTTTCCATATGATTTCTGGAAATAATTGTCTAATAACATTTTCTGTACAAAGTAGATAGAATAAATTGTTGACTGTATCATAGGCTTTCTTTCCTTTCCTATATGCATACATGTATACATTAAGTTCCCAGTGACGGTGATCTAAGTAGTTTTTTCCGTTTGATTCTCTGAAGACGAATTTTCTAATAACATATTTGGTACGACACAAATTGAAGAAAATTGGCGACTAAATATCATTGGTTTCCTTTCCTTTTCTATATGCATTAATGTCTACGATGAGCTCACAGAGGCGGTGTTCTTAGTAGTTTTTCCATTTGCTGGACGTTTTAATATGTTATGCTGATACATTCGATGATTCAATTCTTTTGATTAGTAAGTTGGAGACTCCTTGCATTATCTATTATAGCTTGTTGTACTCTTAATTTGTTTGCTGTGCTTTGTTGGTTTATTAATTAGCTAGTGTTGTTTGGTTGGTTAATTCGATGGAAAAGGCATGGTAAACAGACTTTTAAGCCCTTGCTACATAACTTGTGAGTCCCGCGTGCTTTGTTGCGATCTATAGTACTGAGTTTCCACAATATATATGTAGGTCGCCCATGGTTTACGCGATTGGCGCGGCATATAAAGGTATGGTGGTTTAGAGAGTTATTTGGCCTTATAGTGCAAGCGTTGGTGCAACACTCCAATCACGCATATTTGTGAATTTCTCTCCTTTTGTTCATCAGCCCCTTTCTCAGGTAATAAACCCTTTCTTCTGCATAACTTATTTTGCCATCTCCCTTTATTTCCGTTTTAGATTATAAGAATGATTGAGAATCGCAACAGATAAGAGCTATCCTTTCCTTTTGCCTCCTATGATGTTGAGATGTTATTTTCTCTCGCGCTCAACATATATTATCTCCTCCGTAAAAGAATACAAGAGCATTTGATATTAGGTAACCAACTCGTTTATTATTTTCATGTTGATCTCATGTCGAGTAATATAGTATTGTATCAAGCACGGTTATAACACAGTCGTTTGGCATGTAATTGTAAGGTCCAGTGTTTAATAATGAATCGACCAAGGTGGTAAGGGAAGTCATTTGCTTGACTTCGCTGCTAATGGCCTCCTCTCACAGGCACCAATTTTTGTTGACATCCACAACTGTACACATTTTTATTTTCTTAGGATTTAAAAGATTAGATTGTAAAATTAAATTGTGGGTAAACGAGGTATTCTGTGATAAATTTTATGCTTTTTCTTAATTTCAAAAATTCAAATTCCTTCCTGGAATTCGGACTCTTATCTTAAAAATATTCTATTGTAAACACGTTCTCCAACTATTGCCTCTCTAAATTCCTATGAAAATTTTAGAGAAAAATAGATTGAAATATACATTAAATGATTTGGAGGAGGTCGAAATCTTGGGATAAGCAAAATAAACAAATGAGACCTAATTCAGGTGGGAAATCATATTATTGGACATATGTACCCTTAAATTCGAAAATTTTTCTGGGAAGGCTCTGACTCTGACTCTGAGATTAGAACACACATACGTGGGGAAATATTTTCCCGTAGACTTAAATAAATTGACAATAACCTTATTTGGTTTATCTTTGATTCAGGCGTCCACCTTCAGTTTTCGGTCTATGCTTGA GGAGGATCGCGAAGGTCCCGAGTCAGGGAGGTCGCTGAGATGGATGAGGCCTTGAAACGATGGACACTGGCCTCCGCTTCTACCAATCAAAATTCTAATGCCTTGGAGCATTCCGTTGGCGGTGCTGCTCGCTCAGATCGTTCGGTTCCTGCTGAACTGTCCGAGGATTCTATCACTCAGAATTCTCTAATAGCGTTTTCTAAGGCAGATAGAATAAAATCGCTTATGATGTCGTCGCCCATGGTTTACGCGATTGGCGCGGCATATAAAGGCGTCCACCTTCAGTTTTCGGTCTATGCTTGA GGAGGATCGCGAAGGTCCCGAGTCAGGGAGGTCGCTGAGATGGATGAGGCCTTGAAACGATGGACACTGGCCTCCGCTTCTACCAATCAAAATTCTAATGCCTTGGAGCATTCCGTTGGCGGTGCTGCTCGCTCAGATCGTTCGGTTCCTGCTGAACTGTCCGAGGATTCTATCACTCAGAATTCTCTAATAGCGTTTTCTAAGGCAGATAGAATAAAATCGCTTATGATGTCGTCGCCCATGGTTTACGCGATTGGCGCGGCATATAAAGGCGTCCACCTTCAGTTTTCGGTCTATGCTTGA GGSRRSRVREVAEMDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQNSLIAFSKADRIKSLMMSSPMVYAIGAAYKGVHLQFSVYA Homology
BLAST of Carg01908 vs. NCBI nr
Match: KAG7032011.1 (hypothetical protein SDJN02_06053, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186.8 bits (473), Expect = 9.1e-44 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0
BLAST of Carg01908 vs. NCBI nr
Match: KAG6601216.1 (hypothetical protein SDJN03_06449, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 111.3 bits (277), Expect = 4.8e-21 Identity = 59/60 (98.33%), Postives = 59/60 (98.33%), Query Frame = 0
BLAST of Carg01908 vs. NCBI nr
Match: XP_022956633.1 (uncharacterized protein LOC111458305 isoform X2 [Cucurbita moschata]) HSP 1 Score: 88.6 bits (218), Expect = 3.4e-14 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of Carg01908 vs. NCBI nr
Match: XP_022956632.1 (uncharacterized protein LOC111458305 isoform X1 [Cucurbita moschata]) HSP 1 Score: 88.6 bits (218), Expect = 3.4e-14 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of Carg01908 vs. ExPASy TrEMBL
Match: A0A6J1GWW6 (uncharacterized protein LOC111458305 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458305 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
BLAST of Carg01908 vs. ExPASy TrEMBL
Match: A0A6J1GXH9 (uncharacterized protein LOC111458305 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458305 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14 Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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