Carg01865 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview


Name	Carg01865
Type	gene
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Sec-independent protein translocase protein TATC
Location	Carg_Chr04: 8916479 .. 8918714 (-)
RNA-Seq Expression	Carg01865
Synteny	Carg01865

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACATCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGATTTGGGTGGTGGAAATCGTTCCACCGTCGTCGAGGATGTGCCAGGTACTAATATTACCAAAACCATGATTGATATCAAGGTCTTTTCGCCTGAAAATCGTGTTTGGTTATAGTTTGCGATTCCGAACCGTTTTGGAAGCTTTTTGTGACATGGTTAAACTGCTTATTTCTTTGGTTTTCCCTTATTAGCAATCGGATTATGTAGAGTTCGTCATTAATTTTGTTTAGATTGTGCACGTGATAGGATTAATCCTAGAAATTACCTGTGTCTAATAGAGAAGCATGTCCTGGTTAGATATTTAGCTGAGCTTACGTGAGTCCAGGATTTGAAGGTAGAAGTTCATAAATGGATTTCTGTGAATCCTTTATCCAGGAGGGATAAAACTTATTGGGACTGTTCATGGTTTCAGATTTAAATGTTCATTGCACATATTTGCTCCTACCTATTGAATTATGTGGCTTCAGAAAGTTGATGCTATAATCGATATACAAGTTGCTAATACCCCATTTTTTCATGGAAAAATAAATAGATATCGCCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTCAGAACTTTGAATGATGAAATATAATTGCATTATTAGTATAATCATGGTGACCATCCATTTGGGTAGCTATTGATACTAAAATTAGATACAACAACAAGAATCTAATTAGATATTAAGAACATAGAAAAGTACACTGTATATCGTTATTTGAAATCAGCTTTTTAGTTATATGATGATTGTGCACTAGGATGCATTCTGAATATGCGAACGTAATGAAGCTATGGCGTCGCTTACCCTTTTTATTTGTTAGTATCTCGATGTTGAATTAAAACACTTTCCTTATTGTATCTATCTTTTTGGTGTGTATTTATATTAAGAGTCTTGTGGAGGAGAATTTCGCACTGATCTTGCTACAGAAGTGAGAAAGTGCTCTGCGATGGGTCGTGTCGAATCTTAAGATAGCGCATGTTTCAATTGTAGTTCTTCGGTTGAGTTCGTTCTTTTATTCAAATGCAGCCCATTCTTCATTCCCAATATTAAATATTGTTTCTGATTTGTGTTTAATTCCAAAATTCATTCTCCACTTCCCATATGCAGTTGTATATTAGCGCATGTTGTTGATGGGGGTCAATAACAGTAAAATTCTCCTTGTGCGCTACAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTTGGGCCTATCGTCCTAGGTTCTTCTGTGCTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGATTTTGCTTCATAAATGAATTGGCAGTGATATCCAATAGTAAATCATTCATGGTAAGAGCTAGCTTTTTGACAGCGTTCATTTCATCTTATTTGTAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

mRNA sequence

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACATCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGATTTGGGTGGTGGAAATCGTTCCACCGTCGTCGAGGATGTGCCAGATATCGCCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTTGGGCCTATCGTCCTAGGTTCTTCTGTGCTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

Coding sequence (CDS)

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACATCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGATTTGGGTGGTGGAAATCGTTCCACCGTCGTCGAGGATGTGCCAGATATCGCCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTTGGGCCTATCGTCCTAGGTTCTTCTGTGCTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

Protein sequence

MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR

Homology

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BLAST of Carg01865 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata] >KAG7032053.1 Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657.9 bits (1696), Expect = 4.8e-185
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

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BLAST of Carg01865 vs. NCBI nr
Match: KAG6601263.1 (Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 657.9 bits (1696), Expect = 4.8e-185
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 39  MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 98

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV
Sbjct: 99  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 158

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 159 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 218

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA
Sbjct: 219 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 278

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 279 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 338

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 339 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 385

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BLAST of Carg01865 vs. NCBI nr
Match: XP_023539458.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 651.7 bits (1680), Expect = 3.4e-183
Identity = 346/348 (99.43%), Postives = 346/348 (99.43%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQ-TDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ TDLGGGNRSTVVEDVPDI ESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348

[Close]

BLAST of Carg01865 vs. NCBI nr
Match: XP_022982565.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxima])

HSP 1 Score: 651.4 bits (1679), Expect = 4.5e-183
Identity = 344/347 (99.14%), Postives = 345/347 (99.42%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSA TSHSQLASARI PTSRRSKLRFS+LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. NCBI nr
Match: XP_038892645.1 (sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispida])

HSP 1 Score: 621.7 bits (1602), Expect = 3.8e-174
Identity = 325/347 (93.66%), Postives = 337/347 (97.12%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTS SQLA A I PT RRSKLRF+ LLSR+NFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSQSQLALAPISPTLRRSKLRFTGLLSRKNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGG  STVVEDVPDIAE+STNGAPE+SD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGKGSTVVEDVPDIAENSTNGAPERSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKEL+LILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKELILILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLT+AER+FL PIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTKAERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYA GAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQ+GLVSGDQMLSI
Sbjct: 241 ALNFFVSYAAGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQVGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

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BLAST of Carg01865 vs. ExPASy Swiss-Prot
Match: Q94G17 (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 4.8e-127
Identity = 236/315 (74.92%), Postives = 271/315 (86.03%), Query Frame = 0


Query: 46  SLLSRRNFNRFVCSAVDDDVREKQ--------TDLGGG-----NRSTVVEDVPDIAESST 105
           SL   ++F+R VC AVDD++REKQ        T LG           +++ + + A  + 
Sbjct: 39  SLRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENF 98

Query: 106 NGAPEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKEL 165
               E+S +Y+FLYPSK+LLPDDKEMS+FDHLEELR+RIF+SVL VG +ILGCFAFSK+L
Sbjct: 99  KEDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDL 158

Query: 166 VLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 225
           V ILEAPVK +GVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER
Sbjct: 159 VKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEER 218

Query: 226 RFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 285
           +FLGPIVLGSSVLFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFS
Sbjct: 219 KFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFS 278

Query: 286 TGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 345
           TGLSFQVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLL
Sbjct: 279 TGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLL 338

Query: 346 GLYLGGAWVVKLSGR 348
           GLYLGGAW+VKL+GR
Sbjct: 339 GLYLGGAWMVKLAGR 353

[Close]

BLAST of Carg01865 vs. ExPASy Swiss-Prot
Match: Q9SJV5 (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 2.1e-122
Identity = 245/345 (71.01%), Postives = 277/345 (80.29%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     + T      +     + R + LR+ S+  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRY-SVTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFD 122
           DD    +T  G G  S V +  PD +E         S VY FLYP K+ LPDDKEM++FD
Sbjct: 65  DDDSPTETTPGVG--SAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of Carg01865 vs. ExPASy Swiss-Prot
Match: C4IZX0 (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.3e-121
Identity = 236/309 (76.38%), Postives = 260/309 (84.14%), Query Frame = 0


Query: 50  RRNFNRFVCSAVDDD--VREK----QTDLGGGNRSTVVEDVP--DIAESSTNGAP---EK 109
           RR      C+AVD D  +RE     Q +         +ED P     E+ + G P   E+
Sbjct: 48  RRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIGAALEDPPPGPPVENGSFGGPSQEEQ 107

Query: 110 SDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEA 169
           S +Y FLYPSKDLLPDDKEMS+FDHLEELR RIF+SVLAVGAAILGCFAFSK+LV+ LEA
Sbjct: 108 SALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFLEA 167

Query: 170 PVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPI 229
           PV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FLGPI
Sbjct: 168 PVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPI 227

Query: 230 VLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQ 289
           VLGSSVLFY GI FSY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTGLSFQ
Sbjct: 228 VLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQ 287

Query: 290 VPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGG 348
           VPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGG
Sbjct: 288 VPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGG 347

[Close]

BLAST of Carg01865 vs. ExPASy Swiss-Prot
Match: Q9AVE6 (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.1e-118
Identity = 250/363 (68.87%), Postives = 279/363 (76.86%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAR-TSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCS 60
           MGS +GAL SH       F  R   H +L+  R  P            LS R+     C+
Sbjct: 1   MGS-AGALLSHSPPGLGGFPPRHHHHHRLSVLRCVPLLPSPA---PEPLSCRHGRHLRCA 60

Query: 61  AVDDDV-RE---------KQTDLGGGNRSTVVED-VPDIAESSTNGA----PEKSDVYNF 120
           AVD    RE         ++ +   G+    +ED  P   ++ + G      E+S +YNF
Sbjct: 61  AVDGGAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGITEDEEQSSLYNF 120

Query: 121 LYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQG 180
           LYPSK+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAILGCFA+SK+L+ ILEAPV  QG
Sbjct: 121 LYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILEAPVSVQG 180

Query: 181 VRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSV 240
           VRFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FLGPIVLGSSV
Sbjct: 181 VRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGPIVLGSSV 240

Query: 241 LFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQI 300
           LFY GI FSY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FSTGLSFQVPVIQ+
Sbjct: 241 LFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSFQVPVIQL 300

Query: 301 LLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKL 348
           LLGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VKL
Sbjct: 301 LLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKL 359

[Close]

BLAST of Carg01865 vs. ExPASy Swiss-Prot
Match: P54086 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 7.0e-78
Identity = 151/238 (63.45%), Postives = 187/238 (78.57%), Query Frame = 0


Query: 110 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 169
           D +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF F K LV  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 170 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 229
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ERR LGP+VLGSSVLF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 230 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 289
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 290 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

[Close]

BLAST of Carg01865 vs. ExPASy TrEMBL
Match: A0A6J1GYD1 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111458314 PE=3 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 2.3e-185
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. ExPASy TrEMBL
Match: A0A6J1J324 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111481370 PE=3 SV=1)

HSP 1 Score: 651.4 bits (1679), Expect = 2.2e-183
Identity = 344/347 (99.14%), Postives = 345/347 (99.42%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSA TSHSQLASARI PTSRRSKLRFS+LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAITSHSQLASARISPTSRRSKLRFSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. ExPASy TrEMBL
Match: A0A5A7SVD3 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001410 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.2e-173
Identity = 320/347 (92.22%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTS SQL S RI PT RR+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. ExPASy TrEMBL
Match: A0A1S3BG97 (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 1.2e-173
Identity = 320/347 (92.22%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTS SQL S RI PT RR+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. ExPASy TrEMBL
Match: A0A0A0KTA2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 617.1 bits (1590), Expect = 4.6e-173
Identity = 320/347 (92.22%), Postives = 336/347 (96.83%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTS SQL S RI PT RR+KLRF+ LL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. TAIR 10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase )

HSP 1 Score: 440.3 bits (1131), Expect = 1.5e-123
Identity = 245/345 (71.01%), Postives = 277/345 (80.29%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     + T      +     + R + LR+ S+  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRY-SVTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFD 122
           DD    +T  G G  S V +  PD +E         S VY FLYP K+ LPDDKEM++FD
Sbjct: 65  DDDSPTETTPGVG--SAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

The following BLAST results are available for this feature:

BLAST of Carg01865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956650.1	4.8e-185	100.00	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
KAG6601263.1	4.8e-185	100.00	Sec-independent protein translocase protein TATC, chloroplastic, partial [Cucurb...	[more]
XP_023539458.1	3.4e-183	99.43	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo ...	[more]
XP_022982565.1	4.5e-183	99.14	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxim...	[more]
XP_038892645.1	3.8e-174	93.66	sec-independent protein translocase protein TATC, chloroplastic [Benincasa hispi...	[more]

BLAST of Carg01865 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94G17	4.8e-127	74.92	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
Q9SJV5	2.1e-122	71.01	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
C4IZX0	2.3e-121	76.38	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
Q9AVE6	1.1e-118	68.87	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
P54086	7.0e-78	63.45	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of Carg01865 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GYD1	2.3e-185	100.00	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita mos...	[more]
A0A6J1J324	2.2e-183	99.14	sec-independent protein translocase protein TATC, chloroplastic OS=Cucurbita max...	[more]
A0A5A7SVD3	1.2e-173	92.22	Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3BG97	1.2e-173	92.22	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]
A0A0A0KTA2	4.6e-173	92.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1	[more]

BLAST of Carg01865 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01110.1	1.5e-123	71.01	Sec-independent periplasmic protein translocase	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (SMH-JMG-627) v2
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 211..237 score: 44.65 coord: 119..146 score: 39.08 coord: 262..290 score: 45.61 coord: 193..211 score: 54.92
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 121..335 e-value: 1.3E-80 score: 268.3
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 122..330 e-value: 1.0E-60 score: 205.1
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 48..347
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 115..347 score: 16.461205
None	No IPR available	PANTHER	PTHR30371:SF7	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC-LIKE	coord: 48..347
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 262..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01865-RA	Carg01865-RA	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0065002	intracellular protein transmembrane transport
biological_process	GO:0043953	protein transport by the Tat complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity