Carg01795 (gene) Silver-seed gourd (SMH-JMG-627) v2

Overview
NameCarg01795
Typegene
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
LocationCarg_Chr04: 9277299 .. 9277715 (-)
RNA-Seq ExpressionCarg01795
SyntenyCarg01795
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGGATTGCTATCAAATTGCTTTGAAATTTTGGGACCCCACCAAGCCCTGTTCTTGGGAAAACTTTTCTTTCTTTTCCGAATAGGGAATTTGAGAATCAAACTCGGCTGCACTTTCGAGGAATTCAGTTTCTGTTTCGATCCTCAGAGATGGAAAAGGTAAGGTTTCAGTTTTCATGTTCTTCTCCATCCCTATTTTGATTCTGTTGCTTCGCTGCATTTGCTTCTTCAATCTTCAGGAATCCATTGATGATACCCTCTGCTTCAACCTTTCCCTAATAGCTTCCCCAAATTGTTTGATAATCGAGCTCTTGTTCATATTTGTTGGTACTCATTTGGGTCTCTCTCGATTCTTTTTTGTAGGTTTGGTGGTGAATTTGATTGTTTCCATGTTAGTTCAAAGGCTGTGATGATCTGA

mRNA sequence

TTTGGATTGCTATCAAATTGCTTTGAAATTTTGGGACCCCACCAAGCCCTGTTCTTGGGAAAACTTTTCTTTCTTTTCCGAATAGGGAATTTGAGAATCAAACTCGGCTGCACTTTCGAGGAATTCAGTTTCTGTTTCGATCCTCAGAGATGGAAAAGGTTTGGTGGTGAATTTGATTGTTTCCATGTTAGTTCAAAGGCTGTGATGATCTGA

Coding sequence (CDS)

TTTGGATTGCTATCAAATTGCTTTGAAATTTTGGGACCCCACCAAGCCCTGTTCTTGGGAAAACTTTTCTTTCTTTTCCGAATAGGGAATTTGAGAATCAAACTCGGCTGCACTTTCGAGGAATTCAGTTTCTGTTTCGATCCTCAGAGATGGAAAAGGTTTGGTGGTGAATTTGATTGTTTCCATGTTAGTTCAAAGGCTGTGATGATCTGA

Protein sequence

FGLLSNCFEILGPHQALFLGKLFFLFRIGNLRIKLGCTFEEFSFCFDPQRWKRFGGEFDCFHVSSKAVMI
Homology
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BLAST of Carg01795 vs. NCBI nr
Match: KAG7032123.1 (hypothetical protein SDJN02_06166, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 154.1 bits (388), Expect = 4.6e-34
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0 

Query: 1  FGLLSNCFEILGPHQALFLGKLFFLFRIGNLRIKLGCTFEEFSFCFDPQRWKRFGGEFDC 60
          FGLLSNCFEILGPHQALFLGKLFFLFRIGNLRIKLGCTFEEFSFCFDPQRWKRFGGEFDC
Sbjct: 1  FGLLSNCFEILGPHQALFLGKLFFLFRIGNLRIKLGCTFEEFSFCFDPQRWKRFGGEFDC 60

Query: 61 FHVSSKAVMI 71
          FHVSSKAVMI
Sbjct: 61 FHVSSKAVMI 70

The following BLAST results are available for this feature:
BLAST of Carg01795 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7032123.14.6e-34100.00hypothetical protein SDJN02_06166, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Carg01795 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg01795 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Carg01795 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg01795-RACarg01795-RAmRNA